RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RPS29 (Homo sapiens)

Ensembl gene IDs: ENSG00000213741

Ensembl transcript IDs: ENST00000396020.7, ENST00000539688.1, ENST00000554075.2, ENST00000556230.2, ENST00000557111.5, ENST00000557367.2, ENST00000557519.1

Found 250 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCTTTAGTCCCAGCTACTCGGGACGCCAAGGCAAGAGGATCGCCTaGGACCAGGAGGAGTTCGAGGCTGCAGTGAGCCGTAACAACGCC +
Preference number: 1 (lower is better)
Translates to: AFSPSYSGRQGKRIA*DQEEFEAAVSRNNA
Trigger: GGCGTTGTTACGGCTCACTGCAGCCTCGAACTCCTCCTGGTCTCAGGCGATCCTCTTGCCTTGGCGTCCCGAGTAGCTGGGACTAAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554075.2
ENST00000557519.1
3UTR TCA 90 bp TCAAGGTTTTACAATAAACCTTTAGTGGCAGCCTGCTGGGTCTGGTaGGCTGACTCAGAGCAAAGCACTGGTAAGGAGGGGTCACCCACG +
Preference number: 1 (lower is better)
Translates to: SRFYNKPLVAACWVW*ADSEQSTGKEGSPT
Trigger: CGTGGGTGACCCCTCCTTACCAGTGCTTTGCTCTGAGTCAGCTCACCAGACCCAGCAGGCTGCCACTAAAGGTTTATTGTAAAACCTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR TCA 90 bp AGCTTCCTGAAATGTGTCCTTTGGACTCTTAGAACAGGGTCCATTTaGGGTCCACACCAGCCACTTCTAGAGCCAGAGACTTTGAGTCCT +
Preference number: 1 (lower is better)
Translates to: SFLKCVLWTLRTGSI*GPHQPLLEPETLSP
Trigger: AGGACTCAAAGTCTCTGGCTCTAGAAGTGGCTGGTGTGGACCTCAAATGGACCCTGTTCTAAGAGTCCAAAGGACACATTTCAGGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR CCA 90 bp GGCATCAGGGATCTCTTTCTAAGGGGCCTAATAGGAGAAATGAAGTaGGTGAGTGACAGAAGGAAGGGGAAGGCATTATGGTTCTACAGG +
Preference number: 1 (lower is better)
Translates to: GIRDLFLRGLIGEMK*VSDRRKGKALWFYR
Trigger: CCTGTAGAACCATAATGCCTTCCCCTTCCTTCTGTCACTCACCCACTTCATTTCTCCTATTAGGCCCCTTAGAAAGAGATCCCTGATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR CCA 90 bp GCCACTTCTAGAGCCAGAGACTTTGAGTCCTTGCCCCAGGATCAGTaGTTCTCAAACTATACAGGCAGTCAGGGATCTCTTTCTTTATCT +
Preference number: 1 (lower is better)
Translates to: ATSRARDFESLPQDQ*FSNYTGSQGSLSLS
Trigger: AGATAAAGAAAGAGATCCCTGACTGCCTGTATAGTTTGAGAACCACTGATCCTGGGGCAAGGACTCAAAGTCTCTGGCTCTAGAAGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR GCA 90 bp GATGGTTTTATAAGGGATATCTGCTTTCATGTCTTCCTCATTTCCTaGTTGCCGCTGCCATCTAAGAAGTGCCTTTTGCCTTCTACCATA +
Preference number: 1 (lower is better)
Translates to: DGFIRDICFHVFLIS*LPLPSKKCLLPSTI
Trigger: TATGGTAGAAGGCAAAAGGCACTTCTTAGATGGCAGCGGCAAGCAGGAAATGAGGAAGACATGAAAGCAGATATCCCTTATAAAACCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR GCA 90 bp ATATGGACCTGTCCTAAAATGTGTTCAGAGAGATCAGTGGGATCCTaGATTACTGGTGGCAGAACCACTGTAAGATACAAGCAGGAAAAA +
Preference number: 1 (lower is better)
Translates to: IWTCPKMCSERSVGS*ITGGRTTVRYKQEK
Trigger: TTTTTCCTGCTTGTATCTTACAGTGGTTCTGCCACCAGTAATGCAGGATCCCACTGATCTCTCTGAACACATTTTAGGACAGGTCCATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR CCA 90 bp CAAAGGAAGAATAGATGCACAAGTGTCATCATGAAATGGGACGTGTaGGTGTGTGAAAAGAAAATCCAGGGTGAACCAGACTCAGTCTAT +
Preference number: 1 (lower is better)
Translates to: QRKNRCTSVIMKWDV*VCEKKIQGEPDSVY
Trigger: ATAGACTGAGTCTGGTTCACCCTGGATTTTCTTTTCACACACCCACACGTCCCATTTCATGATGACACTTGTGCATCTATTCTTCCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR CCA 90 bp GACTTCTCCCCAAGAGTCCTGACAACACCAACAATTAAACCACACTaGGCAGAGGACTATTCAGAATTTCAGAAGCTATATTTGACAGAA +
Preference number: 1 (lower is better)
Translates to: DFSPRVLTTPTIKPH*AEDYSEFQKLYLTE
Trigger: TTCTGTCAAATATAGCTTCTGAAATTCTGAATAGTCCTCTGCCCAGTGTGGTTTAATTGTTGGTGTTGTCAGGACTCTTGGGGAGAAGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR TCA 90 bp CAACACTCCACCATTGGCAAGTTCAATAGACTTGTGTTTGTTGTGTaGCATAGCGTGCACAGTATGTTTTCACATGCTTTCTGTTTTATA +
Preference number: 1 (lower is better)
Translates to: QHSTIGKFNRLVFVV*HSVHSMFSHAFCFI
Trigger: TATAAAACAGAAAGCATGTGAAAACATACTGTGCACGCTATGTCACACAACAAACACAAGTCTATTGAACTTGCCAATGGTGGAGTGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR TCA 90 bp AACCACACTGGGCAGAGGACTATTCAGAATTTCAGAAGCTATATTTaGCAGAACTGGCCTAAGACAAAATTACACAATGGTAAAATTTGT +
Preference number: 1 (lower is better)
Translates to: NHTGQRTIQNFRSYI*QNWPKTKLHNGKIC
Trigger: ACAAATTTTACCATTGTGTAATTTTGTCTTAGGCCAGTTCTGTCAAATATAGCTTCTGAAATTCTGAATAGTCCTCTGCCCAGTGTGGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR CCA 90 bp ACAAGTGTATTTAGAAAATCTATAATGAAGGACACAAATGAGAAGTaGTCATTGTCATCATGCTTTGCTCCCTTGGCAATAAAGAAGCTA +
Preference number: 1 (lower is better)
Translates to: TSVFRKSIMKDTNEK*SLSSCFAPLAIKKL
Trigger: TAGCTTCTTTATTGCCAAGGGAGCAAAGCATGATGACAATGACCACTTCTCATTTGTGTCCTTCATTATAGATTTTCTAAATACACTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR CAA 90 bp TTGAGGTCCACACCAGCCACTTCTAGAGCCAGAGACTTTGAGTCCTaGCCCCAGGATCAGTGGTTCTCAAACTATACAGGCAGTCAGGGA +
Preference number: 2 (lower is better)
Translates to: LRSTPATSRARDFES*PQDQWFSNYTGSQG
Trigger: TCCCTGACTGCCTGTATAGTTTGAGAACCACTGATCCTGGGGCAAGGACTCAAAGTCTCTGGCTCTAGAAGTGGCTGGTGTGGACCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR TCA 90 bp TACCAGCGAGAACAACCATGTGATTACATAGCTGGTGCTTTGAGTCAGCCTGACCTGGGTCTGGTGAGCTaGCTCAGAGCAAAGCACTGG +
Preference number: 2 (lower is better)
Translates to: YQREQPCDYIAGALSQPDLGLVS*LRAKHW
Trigger: CCAGTGCTTTGCTCTGAGTCAGCTCACCAGACCCAG...GTCAGGCTGACTCAAAGCACCAGCTATGTAATCACATGGTTGTTCTCGCTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR TCA 90 bp TTAGTCCCAGCTACTCGGGACGCCAAGGCAAGAGGATCGCCTGAGACCAGGAGGGTGGCTTCTCTAAAGTaGATTTCACCAAACACAATA +
Preference number: 2 (lower is better)
Translates to: LVPATRDAKARGSPETRRVASLK*ISPNTI
Trigger: TATTGTGTTTGGTGAAATTCACTTTAGAGAAGCCAC...CCTCCTGGTCTCAGGCGATCCTCTTGCCTTGGCGTCCCGAGTAGCTGGGACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554075.2
3UTR-3UTR GCA 90 bp CTTGATGTTTGGCAATGGAGTCTCAGTCTACACGAGGGAGCTGTTTACACGGTCATCAAACCATCCTCCTaGCTCAGCCTCCCAAAAGGC +
Preference number: 2 (lower is better)
Translates to: LDVWQWSLSLHEGAVYTVIKPSS*LSLPKG
Trigger: GCCTTTTGGGAGGCTGAGGCAGGAGGATGGTTTGAT...GACCGTGTAAACAGCTCCCTCGTGTAGACTGAGACTCCATTGCCAAACATCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR GCA 90 bp ATTAGGTCAACACCCCTTGGATTTCTCAAGCATGTCAGCACTGTTGGAGTGGACAGGCGTAAGCCACTGTaGCTGGCATCAGGGATCTCT +
Preference number: 2 (lower is better)
Translates to: IRSTPLGFLKHVSTVGVDRRKPL*LASGIS
Trigger: AGAGATCCCTGATGCCAGGCACAGTGGCTTACGCCT...GTCCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR CAA 90 bp GTCTTCCTCATTTCCTGCTTGCCGCTGCCATCTAAGAAGTGCCTTTaGCCTTCTACCATAATTGTGAGGCATCCCCAGCCACATGGAACT +
Preference number: 2 (lower is better)
Translates to: VFLISCLPLPSKKCL*PSTIIVRHPQPHGT
Trigger: AGTTCCATGTGGCTGGGGATGCCTCACAATTATGGTAGAAGGCAAAAGGCACTTCTTAGATGGCAGCGGCAAGCAGGAAATGAGGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR CAA 90 bp GCCTTGATTATGGTTTGTGGGCTGTGTCCCCACCCAAATCTCATCTaGAATTGTACTCGCATAATCCCCACATGTTGTGAGAGGGACCCG +
Preference number: 2 (lower is better)
Translates to: ALIMVCGLCPHPNLI*NCTRIIPTCCERDP
Trigger: CGGGTCCCTCTCACAACATGTGGGGATTATGCGAGTACAATTCAAGATGAGATTTGGGTGGGGACACAGCCCACAAACCATAATCAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR TCA 90 bp ATTAGGTCAACACCCCTTGGATTTCTCAAGCATGTCAGCACTGTTGGAGTGGACAGAACAGGGTCCATTTaGGGTCCACACCAGCCACTT +
Preference number: 2 (lower is better)
Translates to: IRSTPLGFLKHVSTVGVDRTGSI*GPHQPL
Trigger: AAGTGGCTGGTGTGGACCTCAAATGGACCCTGTTCT...GTCCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR GCA 90 bp CTTGATGTTTGGCAATGGAGTCTCAGTCTACACGAGGGAGCTGTTTACACGGTCGTCTTCCTCATTTCCTaGTTGCCGCTGCCATCTAAG +
Preference number: 2 (lower is better)
Translates to: LDVWQWSLSLHEGAVYTVVFLIS*LPLPSK
Trigger: CTTAGATGGCAGCGGCAAGCAGGAAATGAGGAAGAC...GACCGTGTAAACAGCTCCCTCGTGTAGACTGAGACTCCATTGCCAAACATCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR CCA 90 bp ATTAGGTCAACACCCCTTGGATTTCTCAAGCATGTCAGCACTGTTGGAGTGGACCTGGTCTGGAACTCCTaGCATCAAACCATCCTCCTG +
Preference number: 2 (lower is better)
Translates to: IRSTPLGFLKHVSTVGVDLVWNS*HQTILL
Trigger: CAGGAGGATGGTTTGATGCCAGGAGTTCCAGACCAG...GTCCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR TCA 90 bp TTCCAGACCTTAGTAACTCTAGCCATAGTCTCTATCAATGGAAATGCACTCCCTGGTGGGAGGATCCCTTaGGGTCAGGAGTTCGAAACC +
Preference number: 2 (lower is better)
Translates to: FQTLVTLAIVSINGNALPGGRIP*GQEFET
Trigger: GGTTTCGAACTCCTGACCTCAAGGGATCCTCCCACC...AGGGAGTGCATTTCCATTGATAGAGACTATGGCTAGAGTTACTAAGGTCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR GCA 90 bp ATTAGGTCAACACCCCTTGGATTTCTCAAGCATGTCAGCACTGTTGGAGTGGACCTGAGCTTGCATCACTaGACTCCAGTCAGAGGAAGA +
Preference number: 2 (lower is better)
Translates to: IRSTPLGFLKHVSTVGVDLSLHH*TPVRGR
Trigger: TCTTCCTCTGACTGGAGTGCAGTGATGCAAGCTCAG...GTCCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR CCA 90 bp TACCAGCGAGAACAACCATGTGATTACATAGCTGGTGCTTTGAGTCAGCCTGACGGGGTTTCACTGCATTaGCCAGGCTGGTCTTTAACT +
Preference number: 2 (lower is better)
Translates to: YQREQPCDYIAGALSQPDGVSLH*PGWSLT
Trigger: AGTTAAAGACCAGCCTGGCCAATGCAGTGAAACCCC...GTCAGGCTGACTCAAAGCACCAGCTATGTAATCACATGGTTGTTCTCGCTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR GCA 90 bp TACCAGCGAGAACAACCATGTGATTACATAGCTGGTGCTTTGAGTCAGCCTGACTTTCCTGCTTGCCGCTaGCATCTAAGAAGTGCCTTT +
Preference number: 2 (lower is better)
Translates to: YQREQPCDYIAGALSQPDFPACR*HLRSAF
Trigger: AAAGGCACTTCTTAGATGGCAGCGGCAAGCAGGAAA...GTCAGGCTGACTCAAAGCACCAGCTATGTAATCACATGGTTGTTCTCGCTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR GCA 90 bp ATTAGGTCAACACCCCTTGGATTTCTCAAGCATGTCAGCACTGTTGGAGTGGACAGGCACAGTGGCTCATaGCTTGATTATGGTTTGTGG +
Preference number: 2 (lower is better)
Translates to: IRSTPLGFLKHVSTVGVDRHSGS*LDYGLW
Trigger: CCACAAACCATAATCAAGGCATGAGCCACTGTGCCT...GTCCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR CCA 90 bp CTTGATGTTTGGCAATGGAGTCTCAGTCTACACGAGGGAGCTGTTTACACGGTCACATATCAGTCTGACTaGTTCCCAGTGAACTTGGTG +
Preference number: 2 (lower is better)
Translates to: LDVWQWSLSLHEGAVYTVTYQSD*FPVNLV
Trigger: CACCAAGTTCACTGGGAACCAGTCAGACTGATATGT...GACCGTGTAAACAGCTCCCTCGTGTAGACTGAGACTCCATTGCCAAACATCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR TCA 90 bp TTCCAGACCTTAGTAACTCTAGCCATAGTCTCTATCAATGGAAATGCACTCCCTGAAGTTGCAGAGAGCTaGGCTTGCATCACTGCACTC +
Preference number: 2 (lower is better)
Translates to: FQTLVTLAIVSINGNALPEVAES*ACITAL
Trigger: GAGTGCAGTGATGCAAGCTCAGCTCTCTGCAACTTC...AGGGAGTGCATTTCCATTGATAGAGACTATGGCTAGAGTTACTAAGGTCTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR TCA 90 bp TACCAGCGAGAACAACCATGTGATTACATAGCTGGTGCTTTGAGTCAGCCTGACAACATATCAATGTGTTaGGAGGGTGACACACCCGAT +
Preference number: 2 (lower is better)
Translates to: YQREQPCDYIAGALSQPDNISMC*EGDTPD
Trigger: ATCGGGTGTGTCACCCTCTCAACACATTGATATGTT...GTCAGGCTGACTCAAAGCACCAGCTATGTAATCACATGGTTGTTCTCGCTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR TCA 90 bp GAAGATGATCAGATGGTATATGTCCAAAGTGAAGGCAAGGTTGGTCATTTAGGCTTGAGCCCAGGAGGTTaGGGTTGCAATAAGCCATGT +
Preference number: 2 (lower is better)
Translates to: EDDQMVYVQSEGKVGHLGLSPGG*GCNKPC
Trigger: ACATGGCTTATTGCAACCTCAACCTCCTGGGCTCAA...GCCTAAATGACCAACCTTGCCTTCACTTTGGACATATACCATCTGATCATCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR GCA 90 bp GATTTGTCTGTGCTGCCAGGAATGTTTATCACTCCATCAACTCGTCCTTTAATACTGGGAGGTGGAAGTTaGAGAGAGCTGAGCTTGCAT +
Preference number: 2 (lower is better)
Translates to: DLSVLPGMFITPSTRPLILGGGS*RELSLH
Trigger: ATGCAAGCTCAGCTCTCTGCAACTTCCACCTCCCAG...TATTAAAGGACGAGTTGATGGAGTGATAAACATTCCTGGCAGCACAGACAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR CCA 90 bp GAAGATGATCAGATGGTATATGTCCAAAGTGAAGGCAAGGTTGGTCATTTAGGCAGCCTCCTGAGAAACTaGGACTACAGACATGCACCA +
Preference number: 2 (lower is better)
Translates to: EDDQMVYVQSEGKVGHLGSLLRN*DYRHAP
Trigger: TGGTGCATGTCTGTAGTCCCAGTTTCTCAGGAGGCT...GCCTAAATGACCAACCTTGCCTTCACTTTGGACATATACCATCTGATCATCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR CCA 90 bp TTCCAGACCTTAGTAACTCTAGCCATAGTCTCTATCAATGGAAATGCACTCCCTGTGATCCCAACACTTTaGGAGACTAGGAAGGGAGGA +
Preference number: 2 (lower is better)
Translates to: FQTLVTLAIVSINGNALPVIPTL*ETRKGG
Trigger: TCCTCCCTTCCTAGTCTCCCAAAGTGTTGGGATCAC...AGGGAGTGCATTTCCATTGATAGAGACTATGGCTAGAGTTACTAAGGTCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR CAA 90 bp ACATTAGGTCAACACCCCTTGGATTTCTCAAGCATGTCAGCACTGTaGGAGTGGACCATCTTTATCTTTTGGCCTCAGTTCCAAATATGC +
Preference number: 2 (lower is better)
Translates to: TLGQHPLDFSSMSAL*EWTIFIFWPQFQIC
Trigger: GCATATTTGGAACTGAGGCCAAAAGATAAAGATGGTCCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR TCA 90 bp GATTTGTCTGTGCTGCCAGGAATGTTTATCACTCCATCAACTCGTCCTTTAATACAGTGGCTCATGCCTTaGTTATGGTTTGTGGGCTGT +
Preference number: 2 (lower is better)
Translates to: DLSVLPGMFITPSTRPLIQWLMP*LWFVGC
Trigger: ACAGCCCACAAACCATAATCAAGGCATGAGCCACTG...TATTAAAGGACGAGTTGATGGAGTGATAAACATTCCTGGCAGCACAGACAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR TCA 90 bp GAAGATGATCAGATGGTATATGTCCAAAGTGAAGGCAAGGTTGGTCATTTAGGCACAAACATGACTCATTaGAACCTGGACCTCTTGGGC +
Preference number: 2 (lower is better)
Translates to: EDDQMVYVQSEGKVGHLGTNMTH*NLDLLG
Trigger: GCCCAAGAGGTCCAGGTTTCAATGAGTCATGTTTGT...GCCTAAATGACCAACCTTGCCTTCACTTTGGACATATACCATCTGATCATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR TCA 90 bp ATTAGGTCAACACCCCTTGGATTTCTCAAGCATGTCAGCACTGTTGGAGTGGACGTTGTAGAATGTACATaGAGCTACTGGTACTTACAC +
Preference number: 2 (lower is better)
Translates to: IRSTPLGFLKHVSTVGVDVVECT*SYWYLH
Trigger: GTGTAAGTACCAGTAGCTTCATGTACATTCTACAAC...GTCCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR GCA 90 bp GATTTGTCTGTGCTGCCAGGAATGTTTATCACTCCATCAACTCGTCCTTTAATAGAGACTTTGAGTCCTTaGCCCAGGATCAGTGGTTCT +
Preference number: 2 (lower is better)
Translates to: DLSVLPGMFITPSTRPLIETLSP*PRISGS
Trigger: AGAACCACTGATCCTGGGGCAAGGACTCAAAGTCTC...TATTAAAGGACGAGTTGATGGAGTGATAAACATTCCTGGCAGCACAGACAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR GCA 90 bp TACCAGCGAGAACAACCATGTGATTACATAGCTGGTGCTTTGAGTCAGCCTGACTTGATTTGTCTGTGCTaGCAGGAATGTTTATCACTC +
Preference number: 2 (lower is better)
Translates to: YQREQPCDYIAGALSQPDLICLC*QECLSL
Trigger: GAGTGATAAACATTCCTGGCAGCACAGACAAATCAA...GTCAGGCTGACTCAAAGCACCAGCTATGTAATCACATGGTTGTTCTCGCTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR CCA 90 bp GATTTGTCTGTGCTGCCAGGAATGTTTATCACTCCATCAACTCGTCCTTTAATAGTAAGCCACTGTGCCTaGCATCAGGGATCTCTTTCT +
Preference number: 2 (lower is better)
Translates to: DLSVLPGMFITPSTRPLIVSHCA*HQGSLS
Trigger: AGAAAGAGATCCCTGATGCCAGGCACAGTGGCTTAC...TATTAAAGGACGAGTTGATGGAGTGATAAACATTCCTGGCAGCACAGACAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR TCA 90 bp GATTTGTCTGTGCTGCCAGGAATGTTTATCACTCCATCAACTCGTCCTTTAATAGACAGAAGAATCACTTaGACCTGGGAGGTGGAAGTT +
Preference number: 2 (lower is better)
Translates to: DLSVLPGMFITPSTRPLIDRRIT*TWEVEV
Trigger: AACTTCCACCTCCCAGGTTCAAGTGATTCTTCTGTC...TATTAAAGGACGAGTTGATGGAGTGATAAACATTCCTGGCAGCACAGACAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR CCA 90 bp GATTTGTCTGTGCTGCCAGGAATGTTTATCACTCCATCAACTCGTCCTTTAATAGAAACCTGGACCTCTTaGGCTCAAGTTATCCTCTCA +
Preference number: 2 (lower is better)
Translates to: DLSVLPGMFITPSTRPLIETWTS*AQVILS
Trigger: TGAGAGGATAACTTGAGCCCAAGAGGTCCAGGTTTC...TATTAAAGGACGAGTTGATGGAGTGATAAACATTCCTGGCAGCACAGACAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR CCA 90 bp GATTTGTCTGTGCTGCCAGGAATGTTTATCACTCCATCAACTCGTCCTTTAATAGTTCAGAGAGATCAGTaGGATCCTGCATTACTGGTG +
Preference number: 2 (lower is better)
Translates to: DLSVLPGMFITPSTRPLIVQRDQ*DPALLV
Trigger: CACCAGTAATGCAGGATCCCACTGATCTCTCTGAAC...TATTAAAGGACGAGTTGATGGAGTGATAAACATTCCTGGCAGCACAGACAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR CAA 90 bp GGTTTTATAAGGGATATCTGCTTTCATGTCTTCCTCATTTCCTGCTaGCCGCTGCCATCTAAGAAGTGCCTTTTGCCTTCTACCATAATT +
Preference number: 2 (lower is better)
Translates to: GFIRDICFHVFLISC*PLPSKKCLLPSTII
Trigger: AATTATGGTAGAAGGCAAAAGGCACTTCTTAGATGGCAGCGGCAAGCAGGAAATGAGGAAGACATGAAAGCAGATATCCCTTATAAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR CAA 90 bp CCAACCAACACTCCACCATTGGCAAGTTCAATAGACTTGTGTTTGTaGTGTGACATAGCGTGCACAGTATGTTTTCACATGCTTTCTGTT +
Preference number: 2 (lower is better)
Translates to: PTNTPPLASSIDLCL*CDIACTVCFHMLSV
Trigger: AACAGAAAGCATGTGAAAACATACTGTGCACGCTATGTCACACAACAAACACAAGTCTATTGAACTTGCCAATGGTGGAGTGTTGGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR CAA 90 bp CTACCAACCAACACTCCACCATTGGCAAGTTCAATAGACTTGTGTTaGTTGTGTGACATAGCGTGCACAGTATGTTTTCACATGCTTTCT +
Preference number: 2 (lower is better)
Translates to: LPTNTPPLASSIDLC*LCDIACTVCFHMLS
Trigger: AGAAAGCATGTGAAAACATACTGTGCACGCTATGTCACACAACAAACACAAGTCTATTGAACTTGCCAATGGTGGAGTGTTGGTTGGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR GCA 90 bp GGAACTGTGAGTCCAATAAACCTATTTTTCTTCCCAGTCTTAGGTATGTCTTTAGATGACCACCTGGGCTaGTCTTTCCAAGATGGCTTT +
Preference number: 2 (lower is better)
Translates to: GTVSPINLFFFPVLGMSLDDHLG*SFQDGF
Trigger: AAAGCCATCTTGGAAAGAGCAGCCCAGGTGGTCATC...TAAAGACATACCTAAGACTGGGAAGAAAAATAGGTTTATTGGACTCACAGTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR CCA 90 bp GATTTGTCTGTGCTGCCAGGAATGTTTATCACTCCATCAACTCGTCCTTTAATAATGCACCACCACGCCTaGCTAATTGTTTTTGGGTTT +
Preference number: 2 (lower is better)
Translates to: DLSVLPGMFITPSTRPLIMHHHA*LIVFGF
Trigger: AAACCCAAAAACAATTAGCCAGGCGTGGTGGTGCAT...TATTAAAGGACGAGTTGATGGAGTGATAAACATTCCTGGCAGCACAGACAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR CCA 90 bp GATTTGTCTGTGCTGCCAGGAATGTTTATCACTCCATCAACTCGTCCTTTAATAGTCAGCTCCCGAATATaGACCTGTCCTAAAATGTGT +
Preference number: 2 (lower is better)
Translates to: DLSVLPGMFITPSTRPLIVSSRI*TCPKMC
Trigger: ACACATTTTAGGACAGGTCCATATTCGGGAGCTGAC...TATTAAAGGACGAGTTGATGGAGTGATAAACATTCCTGGCAGCACAGACAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR GCA 90 bp GATTTGTCTGTGCTGCCAGGAATGTTTATCACTCCATCAACTCGTCCTTTAATACTGCCATCTAAGAAGTaGCTTTTGCCTTCTACCATA +
Preference number: 2 (lower is better)
Translates to: DLSVLPGMFITPSTRPLILPSKK*LLPSTI
Trigger: TATGGTAGAAGGCAAAAGGCACTTCTTAGATGGCAG...TATTAAAGGACGAGTTGATGGAGTGATAAACATTCCTGGCAGCACAGACAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR CCA 90 bp GAAGATGATCAGATGGTATATGTCCAAAGTGAAGGCAAGGTTGGTCATTTAGGCTCAGAAGGTCCAGTCTaGAATCTGCTCAAAGAATTT +
Preference number: 2 (lower is better)
Translates to: EDDQMVYVQSEGKVGHLGSEGPV*NLLKEF
Trigger: AAATTCTTTGAGCAGATTCCAGACTGGACCTTCTGA...GCCTAAATGACCAACCTTGCCTTCACTTTGGACATATACCATCTGATCATCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR CCA 90 bp GATTTGTCTGTGCTGCCAGGAATGTTTATCACTCCATCAACTCGTCCTTTAATAAAGGGGAAGGCATTATaGTTCTACAGGCCTTCAATA +
Preference number: 2 (lower is better)
Translates to: DLSVLPGMFITPSTRPLIKGKAL*FYRPSI
Trigger: TATTGAAGGCCTGTAGAACCATAATGCCTTCCCCTT...TATTAAAGGACGAGTTGATGGAGTGATAAACATTCCTGGCAGCACAGACAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR CCA 90 bp GATTTGTCTGTGCTGCCAGGAATGTTTATCACTCCATCAACTCGTCCTTTAATAATAGGAGAAATGAAGTaGGTGAGTGACAGAAGGAAG +
Preference number: 2 (lower is better)
Translates to: DLSVLPGMFITPSTRPLIIGEMK*VSDRRK
Trigger: CTTCCTTCTGTCACTCACCCACTTCATTTCTCCTAT...TATTAAAGGACGAGTTGATGGAGTGATAAACATTCCTGGCAGCACAGACAAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR TCA 90 bp GGAACTGTGAGTCCAATAAACCTATTTTTCTTCCCAGTCTTAGGTATGTCTTTATTTGACATATCAGTCTaGCTGGTTCCCAGTGAACTT +
Preference number: 2 (lower is better)
Translates to: GTVSPINLFFFPVLGMSLFDISV*LVPSEL
Trigger: AAGTTCACTGGGAACCAGTCAGACTGATATGTCAAA...TAAAGACATACCTAAGACTGGGAAGAAAAATAGGTTTATTGGACTCACAGTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR TCA 72 bp CCCAGCTACTCGGGACGCCAAGGCAAGAGGATCGCCTaGGACCAGGAGGAGTTCGAGGCTGCAGTGAGCCGT +
Preference number: 3 (lower is better)
Translates to: PSYSGRQGKRIA*DQEEFEAAVSR
Trigger: ACGGCTCACTGCAGCCTCGAACTCCTCCTGGTCTCAGGCGATCCTCTTGCCTTGGCGTCCCGAGTAGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000554075.2
ENST00000557519.1
3UTR TCA 72 bp TACAATAAACCTTTAGTGGCAGCCTGCTGGGTCTGGTaGGCTGACTCAGAGCAAAGCACTGGTAAGGAGGGG +
Preference number: 3 (lower is better)
Translates to: YNKPLVAACWVW*ADSEQSTGKEG
Trigger: CCCCTCCTTACCAGTGCTTTGCTCTGAGTCAGCTCACCAGACCCAGCAGGCTGCCACTAAAGGTTTATTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR CAA 90 bp CTTGATGTTTGGCAATGGAGTCTCAGTCTACACGAGGGAGCTGTTTACACGGTCTGCCTTGATTATGGTTaGTGGGCTGTGTCCCCACCC +
Preference number: 3 (lower is better)
Translates to: LDVWQWSLSLHEGAVYTVCLDYG*WAVSPP
Trigger: GGGTGGGGACACAGCCCACAAACCATAATCAAGGCA...GACCGTGTAAACAGCTCCCTCGTGTAGACTGAGACTCCATTGCCAAACATCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR CAA 90 bp TTAGTCCCAGCTACTCGGGACGCCAAGGCAAGAGGATCGCCTGAGACCAGGAGGCTCCATTCTATTAATTaGATTGCCCAAACCATCAAC +
Preference number: 3 (lower is better)
Translates to: LVPATRDAKARGSPETRRLHSIN*IAQTIN
Trigger: GTTGATGGTTTGGGCAATCAAATTAATAGAATGGAG...CCTCCTGGTCTCAGGCGATCCTCTTGCCTTGGCGTCCCGAGTAGCTGGGACTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554075.2
3UTR TCA 72 bp GGTGAAGCATCCTGGTTGGTGAACATATCAATGTGTTaGGAGGGTGACACACCCGATTCCACAATGCAGGAC +
Preference number: 3 (lower is better)
Translates to: GEASWLVNISMC*EGDTPDSTMQD
Trigger: GTCCTGCATTGTGGAATCGGGTGTGTCACCCTCTCAACACATTGATATGTTCACCAACCAGGATGCTTCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR TCA 72 bp CTTGGATCACACCTGAATTTGGGCTGGAAGATGAGATaGCCCAAGATGGAGGCCAGTTACCAGCGAGAACAA +
Preference number: 3 (lower is better)
Translates to: LGSHLNLGWKMR*PKMEASYQREQ
Trigger: TTGTTCTCGCTGGTAACTGGCCTCCATCTTGGGTCATCTCATCTTCCAGCCCAAATTCAGGTGTGATCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR GCA 72 bp GGAGGTGGAAGTTGCAGAGAGCTGAGCTTGCATCACTaGACTCCAGTCAGAGGAAGACTTCATCTCAAAAAC +
Preference number: 3 (lower is better)
Translates to: GGGSCRELSLHH*TPVRGRLHLKN
Trigger: GTTTTTGAGATGAAGTCTTCCTCTGACTGGAGTGCAGTGATGCAAGCTCAGCTCTCTGCAACTTCCACCTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR CCA 72 bp AGAGCCAGAGACTTTGAGTCCTTGCCCCAGGATCAGTaGTTCTCAAACTATACAGGCAGTCAGGGATCTCTT +
Preference number: 3 (lower is better)
Translates to: RARDFESLPQDQ*FSNYTGSQGSL
Trigger: AAGAGATCCCTGACTGCCTGTATAGTTTGAGAACCACTGATCCTGGGGCAAGGACTCAAAGTCTCTGGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR CAA 90 bp GAAGATGATCAGATGGTATATGTCCAAAGTGAAGGCAAGGTTGGTCATTTAGGCCCTGGGAGGTGGAAGTaGCAGAGAGCTGAGCTTGCA +
Preference number: 3 (lower is better)
Translates to: EDDQMVYVQSEGKVGHLGPGRWK*QRAELA
Trigger: TGCAAGCTCAGCTCTCTGCAACTTCCACCTCCCAGG...GCCTAAATGACCAACCTTGCCTTCACTTTGGACATATACCATCTGATCATCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR CAA 90 bp ATTAGGTCAACACCCCTTGGATTTCTCAAGCATGTCAGCACTGTTGGAGTGGACTATGGTCCTAGCTACTaGGAGTCTGAGGTAGGAGGA +
Preference number: 3 (lower is better)
Translates to: IRSTPLGFLKHVSTVGVDYGPSY*ESEVGG
Trigger: TCCTCCTACCTCAGACTCCAAGTAGCTAGGACCATA...GTCCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR TCA 72 bp AAATGTGTCCTTTGGACTCTTAGAACAGGGTCCATTTaGGGTCCACACCAGCCACTTCTAGAGCCAGAGACT +
Preference number: 3 (lower is better)
Translates to: KCVLWTLRTGSI*GPHQPLLEPET
Trigger: AGTCTCTGGCTCTAGAAGTGGCTGGTGTGGACCTCAAATGGACCCTGTTCTAAGAGTCCAAAGGACACATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR CAA 90 bp GAAGATGATCAGATGGTATATGTCCAAAGTGAAGGCAAGGTTGGTCATTTAGGCTGCAGAGAGCTGAGCTaGCATCACTGCACTCCAGTC +
Preference number: 3 (lower is better)
Translates to: EDDQMVYVQSEGKVGHLGCRELS*HHCTPV
Trigger: GACTGGAGTGCAGTGATGCAAGCTCAGCTCTCTGCA...GCCTAAATGACCAACCTTGCCTTCACTTTGGACATATACCATCTGATCATCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR CAA 90 bp TACCAGCGAGAACAACCATGTGATTACATAGCTGGTGCTTTGAGTCAGCCTGACTCACCCACGAAGAAATaGGAAGGCCTGAGCAAAGAA +
Preference number: 3 (lower is better)
Translates to: YQREQPCDYIAGALSQPDSPTKK*EGLSKE
Trigger: TTCTTTGCTCAGGCCTTCCAATTTCTTCGTGGGTGA...GTCAGGCTGACTCAAAGCACCAGCTATGTAATCACATGGTTGTTCTCGCTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR CAA 90 bp GAAGATGATCAGATGGTATATGTCCAAAGTGAAGGCAAGGTTGGTCATTTAGGCTGGGGTTTCACTGCATaGGCCAGGCTGGTCTTTAAC +
Preference number: 3 (lower is better)
Translates to: EDDQMVYVQSEGKVGHLGWGFTA*ARLVFN
Trigger: GTTAAAGACCAGCCTGGCCAATGCAGTGAAACCCCA...GCCTAAATGACCAACCTTGCCTTCACTTTGGACATATACCATCTGATCATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR CAA 90 bp TTCCAGACCTTAGTAACTCTAGCCATAGTCTCTATCAATGGAAATGCACTCCCTAGAGACTTTGAGTCCTaGCCCCAGGATCAGTGGTTC +
Preference number: 3 (lower is better)
Translates to: FQTLVTLAIVSINGNALPRDFES*PQDQWF
Trigger: GAACCACTGATCCTGGGGCAAGGACTCAAAGTCTCT...AGGGAGTGCATTTCCATTGATAGAGACTATGGCTAGAGTTACTAAGGTCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR TCA 72 bp TTTAGATACCGAAGCATGGTGAAGCATCCTGGTTGGTaGACATATCAATGTGTTGAGAGGGTGACACACCCG +
Preference number: 3 (lower is better)
Translates to: FRYRSMVKHPGW*TYQCVERVTHP
Trigger: CGGGTGTGTCACCCTCTCAACACATTGATATGTTCACCAACCAGGATGCTTCACCATGCTTCGGTATCTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR CCA 72 bp GTGTTCAGAGAGATCAGTGGGATCCTGCATTACTGGTaGCAGAACCACTGTAAGATACAAGCAGGAAAAAGG +
Preference number: 3 (lower is better)
Translates to: VFREISGILHYW*QNHCKIQAGKR
Trigger: CCTTTTTCCTGCTTGTATCTTACAGTGGTTCTGCCACCAGTAATGCAGGATCCCACTGATCTCTCTGAACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR CAA 90 bp TTCCAGACCTTAGTAACTCTAGCCATAGTCTCTATCAATGGAAATGCACTCCCTAGACAGAAGAATCACTaGAACCTGGGAGGTGGAAGT +
Preference number: 3 (lower is better)
Translates to: FQTLVTLAIVSINGNALPRQKNH*NLGGGS
Trigger: ACTTCCACCTCCCAGGTTCAAGTGATTCTTCTGTCT...AGGGAGTGCATTTCCATTGATAGAGACTATGGCTAGAGTTACTAAGGTCTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR CAA 90 bp ATTAGGTCAACACCCCTTGGATTTCTCAAGCATGTCAGCACTGTTGGAGTGGACCTGGGTAAAGGCTTATaGATTTTTCTAGCACTTGCT +
Preference number: 3 (lower is better)
Translates to: IRSTPLGFLKHVSTVGVDLGKGL*IFLALA
Trigger: AGCAAGTGCTAGAAAAATCAATAAGCCTTTACCCAG...GTCCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR GCA 72 bp TGTCCTAAAATGTGTTCAGAGAGATCAGTGGGATCCTaGATTACTGGTGGCAGAACCACTGTAAGATACAAG +
Preference number: 3 (lower is better)
Translates to: CPKMCSERSVGS*ITGGRTTVRYK
Trigger: CTTGTATCTTACAGTGGTTCTGCCACCAGTAATGCAGGATCCCACTGATCTCTCTGAACACATTTTAGGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR CCA 72 bp AATGTGTTCAGAGAGATCAGTGGGATCCTGCATTACTaGTGGCAGAACCACTGTAAGATACAAGCAGGAAAA +
Preference number: 3 (lower is better)
Translates to: NVFREISGILHY*WQNHCKIQAGK
Trigger: TTTTCCTGCTTGTATCTTACAGTGGTTCTGCCACCAGTAATGCAGGATCCCACTGATCTCTCTGAACACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR CCA 72 bp AATAGATGCACAAGTGTCATCATGAAATGGGACGTGTaGGTGTGTGAAAAGAAAATCCAGGGTGAACCAGAC +
Preference number: 3 (lower is better)
Translates to: NRCTSVIMKWDV*VCEKKIQGEPD
Trigger: GTCTGGTTCACCCTGGATTTTCTTTTCACACACCCACACGTCCCATTTCATGATGACACTTGTGCATCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR CAA 90 bp GAAGATGATCAGATGGTATATGTCCAAAGTGAAGGCAAGGTTGGTCATTTAGGCTGGTTCCCAGTGAACTaGGTGCTCTTTTTGATGATC +
Preference number: 3 (lower is better)
Translates to: EDDQMVYVQSEGKVGHLGWFPVN*VLFLMI
Trigger: GATCATCAAAAAGAGCACCAAGTTCACTGGGAACCA...GCCTAAATGACCAACCTTGCCTTCACTTTGGACATATACCATCTGATCATCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR CAA 90 bp GAAGATGATCAGATGGTATATGTCCAAAGTGAAGGCAAGGTTGGTCATTTAGGCTACAAACATGACTCATaGAAACCTGGACCTCTTGGG +
Preference number: 3 (lower is better)
Translates to: EDDQMVYVQSEGKVGHLGYKHDS*KPGPLG
Trigger: CCCAAGAGGTCCAGGTTTCAATGAGTCATGTTTGTA...GCCTAAATGACCAACCTTGCCTTCACTTTGGACATATACCATCTGATCATCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR GCA 72 bp AGTATCACGAGAACTGATGGTTTTATAAGGGATATCTaGTTTCATGTCTTCCTCATTTCCTGCTTGCCGCTG +
Preference number: 3 (lower is better)
Translates to: SITRTDGFIRDI*FHVFLISCLPL
Trigger: CAGCGGCAAGCAGGAAATGAGGAAGACATGAAAGCAGATATCCCTTATAAAACCATCAGTTCTCGTGATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR CAA 90 bp GATTTGTCTGTGCTGCCAGGAATGTTTATCACTCCATCAACTCGTCCTTTAATAGGACCCTGTATAGCCTaGATTCCTACACACACATAT +
Preference number: 3 (lower is better)
Translates to: DLSVLPGMFITPSTRPLIGPCIA*IPTHTY
Trigger: ATATGTGTGTGTAGGAATCAAGGCTATACAGGGTCC...TATTAAAGGACGAGTTGATGGAGTGATAAACATTCCTGGCAGCACAGACAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR TCA 72 bp AAGACTAAGTCCTTCACCTTCTCCATTCTATTAATTTaGTTGCCCAAACCATCAACACTGTCACCAGCTACC +
Preference number: 3 (lower is better)
Translates to: KTKSFTFSILLI*LPKPSTLSPAT
Trigger: GGTAGCTGGTGACAGTGTTGATGGTTTGGGCAATCAAATTAATAGAATGGAGAAGGTGAAGGACTTAGTCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554075.2
3UTR CCA 72 bp CCAAGAGTCCTGACAACACCAACAATTAAACCACACTaGGCAGAGGACTATTCAGAATTTCAGAAGCTATAT +
Preference number: 3 (lower is better)
Translates to: PRVLTTPTIKPH*AEDYSEFQKLY
Trigger: ATATAGCTTCTGAAATTCTGAATAGTCCTCTGCCCAGTGTGGTTTAATTGTTGGTGTTGTCAGGACTCTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR-3UTR CAA 90 bp GAAGATGATCAGATGGTATATGTCCAAAGTGAAGGCAAGGTTGGTCATTTAGGCCACCCAAATCTCATCTaGAATTGTACTCGCATAATC +
Preference number: 3 (lower is better)
Translates to: EDDQMVYVQSEGKVGHLGHPNLI*NCTRII
Trigger: GATTATGCGAGTACAATTCAAGATGAGATTTGGGTG...GCCTAAATGACCAACCTTGCCTTCACTTTGGACATATACCATCTGATCATCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR TCA 72 bp GAAACCCCAATAAAAACTTTAGATACCGAAGCATGGTaGAGCATCCTGGTTGGTGAACATATCAATGTGTTG +
Preference number: 3 (lower is better)
Translates to: ETPIKTLDTEAW*SILVGEHINVL
Trigger: CAACACATTGATATGTTCACCAACCAGGATGCTTCACCATGCTTCGGTATCTAAAGTTTTTATTGGGGTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR TCA 72 bp ACCATTGGCAAGTTCAATAGACTTGTGTTTGTTGTGTaGCATAGCGTGCACAGTATGTTTTCACATGCTTTC +
Preference number: 3 (lower is better)
Translates to: TIGKFNRLVFVV*HSVHSMFSHAF
Trigger: GAAAGCATGTGAAAACATACTGTGCACGCTATGTCACACAACAAACACAAGTCTATTGAACTTGCCAATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR CCA 72 bp TATACAGTAAGAAGTTACAAAGTCAGCTCCCGAATATaGACCTGTCCTAAAATGTGTTCAGAGAGATCAGTG +
Preference number: 3 (lower is better)
Translates to: YTVRSYKVSSRI*TCPKMCSERSV
Trigger: CACTGATCTCTCTGAACACATTTTAGGACAGGTCCATATTCGGGAGCTGACTTTGTAACTTCTTACTGTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR TCA 72 bp TACTTTCTCATGGTAGTGAGTAAGTATCACGAGAACTaGTGGTTTTATAAGGGATATCTGCTTTCATGTCTT +
Preference number: 3 (lower is better)
Translates to: YFLMVVSKYHEN*WFYKGYLLSCL
Trigger: AAGACATGAAAGCAGATATCCCTTATAAAACCATCAGTTCTCGTGATACTTACTCACTACCATGAGAAAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR CCA 72 bp TTTAGAAAATCTATAATGAAGGACACAAATGAGAAGTaGTCATTGTCATCATGCTTTGCTCCCTTGGCAATA +
Preference number: 3 (lower is better)
Translates to: FRKSIMKDTNEK*SLSSCFAPLAI
Trigger: TATTGCCAAGGGAGCAAAGCATGATGACAATGACCACTTCTCATTTGTGTCCTTCATTATAGATTTTCTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp GTCCCAGCTACTCGGGACGCCAAGGCAAGAGGATCGCCTGAGACCAGGAGGAGTTCTGCCCAAACAACATaGAGTACGCCTGCAGACGCC +
Preference number: 4 (lower is better)
Translates to: VPATRDAKARGSPETRRSSAQTT*STPADA
Trigger: GGCGTCTGCAGGCGTACTCCATGTTGTTTGGGCAGA...ACTCCTCCTGGTCTCAGGCGATCCTCTTGCCTTGGCGTCCCGAGTAGCTGGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554075.2
CDS-3UTR GCA 90 bp GGTTGCACTGAGCGGAGATCACGCCATCGCACTCCAGGTTGGGTGAGTGCGACTCCCCACAACCTTCTCTaGCCAAACAACATGGAGTAC +
Preference number: 4 (lower is better)
Translates to: GCTERRSRHRTPGWVSATPHNLL*PNNMEY
Trigger: GTACTCCATGTTGTTTGGGCAGAGAAGGTTGTGGGG...AGTCGCACTCACCCAACCTGGAGTGCGATGGCGTGATCTCCGCTCAGTGCAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554075.2
CDS-3UTR GCA 90 bp CAGCTACTCGGGACGCCAAGGCAAGAGGATCGCCTGAGACCAGGAGGAGTTCGAAAGCTCTTGGTCGAATaGTCAGAATTACCACTCCAG +
Preference number: 4 (lower is better)
Translates to: QLLGTPRQEDRLRPGGVRKLLVE*SELPLQ
Trigger: CTGGAGTGGTAATTCTGAGCATTCGACCAAGAGCTT...TCGAACTCCTCCTGGTCTCAGGCGATCCTCTTGCCTTGGCGTCCCGAGTAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554075.2
CDS-3UTR TCA 90 bp TACCAGCGAGAACAACCATGTGATTACATAGCTGGTGCTTTGAGTCAGCCTGACGCCTGCTGGGTCTGGTaGGCTGACTCAGAGCAAAGC +
Preference number: 4 (lower is better)
Translates to: YQREQPCDYIAGALSQPDACWVW*ADSEQS
Trigger: GCTTTGCTCTGAGTCAGCTCACCAGACCCAGCAGGC...GTCAGGCTGACTCAAAGCACCAGCTATGTAATCACATGGTTGTTCTCGCTGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR GCA 90 bp CTTGATGTTTGGCAATGGAGTCTCAGTCTACACGAGGGAGCTGTTTACACGGTCCCAGGAGACAGAGGCTaGAGTGAGCCAAGATGGCAC +
Preference number: 4 (lower is better)
Translates to: LDVWQWSLSLHEGAVYTVPGDRG*SEPRWH
Trigger: GTGCCATCTTGGCTCACTGCAGCCTCTGTCTCCTGG...GACCGTGTAAACAGCTCCCTCGTGTAGACTGAGACTCCATTGCCAAACATCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp ATTAGGTCAACACCCCTTGGATTTCTCAAGCATGTCAGCACTGTTGGAGTGGACAGACAGAGGCTGCAGTaGGCCAAGATGGCACCACTG +
Preference number: 4 (lower is better)
Translates to: IRSTPLGFLKHVSTVGVDRQRLQ*AKMAPL
Trigger: CAGTGGTGCCATCTTGGCTCACTGCAGCCTCTGTCT...GTCCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp TACCAGCGAGAACAACCATGTGATTACATAGCTGGTGCTTTGAGTCAGCCTGACTTGAGCCCAGCAGGTTaGGGCTGCAGTAAGCCAAGA +
Preference number: 4 (lower is better)
Translates to: YQREQPCDYIAGALSQPDLSPAG*GCSKPR
Trigger: TCTTGGCTTACTGCAGCCTCAACCTGCTGGGCTCAA...GTCAGGCTGACTCAAAGCACCAGCTATGTAATCACATGGTTGTTCTCGCTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp CTTGATGTTTGGCAATGGAGTCTCAGTCTACACGAGGGAGCTGTTTACACGGTCGGGACTCCCAAAGTGTaGCTGGCATCAAAAGTGAGG +
Preference number: 4 (lower is better)
Translates to: LDVWQWSLSLHEGAVYTVGTPKV*LASKVR
Trigger: CCTCACTTTTGATGCCAGTCACACTTTGGGAGTCCC...GACCGTGTAAACAGCTCCCTCGTGTAGACTGAGACTCCATTGCCAAACATCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp GGTTGCACTGAGCGGAGATCACGCCATCGCACTCCAGGTTGGGTGAGTGCGACTGTGGCTTCTCTAAAGTaGATTTCACCAAACACAATA +
Preference number: 4 (lower is better)
Translates to: GCTERRSRHRTPGWVSATVASLK*ISPNTI
Trigger: TATTGTGTTTGGTGAAATTCACTTTAGAGAAGCCAC...AGTCGCACTCACCCAACCTGGAGTGCGATGGCGTGATCTCCGCTCAGTGCAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554075.2
CDS-3UTR GCA 90 bp TACCAGCGAGAACAACCATGTGATTACATAGCTGGTGCTTTGAGTCAGCCTGACACCATCTCAGCTCACTaGAACCTCTGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: YQREQPCDYIAGALSQPDTISAH*NLCLPG
Trigger: ACCTGGGAGGCAGAGGTTGCAGTGAGCTGAGATGGT...GTCAGGCTGACTCAAAGCACCAGCTATGTAATCACATGGTTGTTCTCGCTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp ATTAGGTCAACACCCCTTGGATTTCTCAAGCATGTCAGCACTGTTGGAGTGGACGAAGTTGCAGAGAGCTaGGCTTGCATCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: IRSTPLGFLKHVSTVGVDEVAES*ACITAL
Trigger: GAGTGCAGTGATGCAAGCTCAGCTCTCTGCAACTTC...GTCCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp CTTGATGTTTGGCAATGGAGTCTCAGTCTACACGAGGGAGCTGTTTACACGGTCTTGAGCCCAGGAGGTTaGGGTTGCAATAAGCCATGT +
Preference number: 4 (lower is better)
Translates to: LDVWQWSLSLHEGAVYTVLSPGG*GCNKPC
Trigger: ACATGGCTTATTGCAACCTCAACCTCCTGGGCTCAA...GACCGTGTAAACAGCTCCCTCGTGTAGACTGAGACTCCATTGCCAAACATCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR GCA 90 bp ATTAGGTCAACACCCCTTGGATTTCTCAAGCATGTCAGCACTGTTGGAGTGGACCTGGGAGGTGGAAGTTaGAGAGAGCTGAGCTTGCAT +
Preference number: 4 (lower is better)
Translates to: IRSTPLGFLKHVSTVGVDLGGGS*RELSLH
Trigger: ATGCAAGCTCAGCTCTCTGCAACTTCCACCTCCCAG...GTCCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR GCA 90 bp CTTGATGTTTGGCAATGGAGTCTCAGTCTACACGAGGGAGCTGTTTACACGGTCAGCTGGGCATTGTGGTaGACACTTATGGTCCTAGCT +
Preference number: 4 (lower is better)
Translates to: LDVWQWSLSLHEGAVYTVSWALW*TLMVLA
Trigger: AGCTAGGACCATAAGTGTGCACCACAATGCCCAGCT...GACCGTGTAAACAGCTCCCTCGTGTAGACTGAGACTCCATTGCCAAACATCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR GCA 90 bp TACCAGCGAGAACAACCATGTGATTACATAGCTGGTGCTTTGAGTCAGCCTGACGGGATTACAGGTGACTaGCACCATGCCCGGCTAATT +
Preference number: 4 (lower is better)
Translates to: YQREQPCDYIAGALSQPDGITGD*HHARLI
Trigger: AATTAGCCGGGCATGGTGGCAGTCACCTGTAATCCC...GTCAGGCTGACTCAAAGCACCAGCTATGTAATCACATGGTTGTTCTCGCTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp CTTGATGTTTGGCAATGGAGTCTCAGTCTACACGAGGGAGCTGTTTACACGGTCGTGATCCCAACACTTTaGGAGACTAGGAAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LDVWQWSLSLHEGAVYTVVIPTL*ETRKGG
Trigger: TCCTCCCTTCCTAGTCTCCCAAAGTGTTGGGATCAC...GACCGTGTAAACAGCTCCCTCGTGTAGACTGAGACTCCATTGCCAAACATCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR CAA 72 bp ATTTCCTGCTTGCCGCTGCCATCTAAGAAGTGCCTTTaGCCTTCTACCATAATTGTGAGGCATCCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: ISCLPLPSKKCL*PSTIIVRHPQP
Trigger: TGGCTGGGGATGCCTCACAATTATGGTAGAAGGCAAAAGGCACTTCTTAGATGGCAGCGGCAAGCAGGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp GAAGATGATCAGATGGTATATGTCCAAAGTGAAGGCAAGGTTGGTCATTTAGGCGAAGGGAGGATTGCATaGGCCCAGGAGTTCCAGACC +
Preference number: 4 (lower is better)
Translates to: EDDQMVYVQSEGKVGHLGEGRIA*AQEFQT
Trigger: GGTCTGGAACTCCTGGGCTCATGCAATCCTCCCTTC...GCCTAAATGACCAACCTTGCCTTCACTTTGGACATATACCATCTGATCATCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp TTCCAGACCTTAGTAACTCTAGCCATAGTCTCTATCAATGGAAATGCACTCCCTCTGGGTCTGGTGAGCTaGCTCAGAGCAAAGCACTGG +
Preference number: 4 (lower is better)
Translates to: FQTLVTLAIVSINGNALPLGLVS*LRAKHW
Trigger: CCAGTGCTTTGCTCTGAGTCAGCTCACCAGACCCAG...AGGGAGTGCATTTCCATTGATAGAGACTATGGCTAGAGTTACTAAGGTCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp ATTAGGTCAACACCCCTTGGATTTCTCAAGCATGTCAGCACTGTTGGAGTGGACTTGAGGTCAGGAGTTTaGGACCAGACTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: IRSTPLGFLKHVSTVGVDLRSGV*DQTGQH
Trigger: ATGTTGGCCAGTCTGGTCTCAAACTCCTGACCTCAA...GTCCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp ATTAGGTCAACACCCCTTGGATTTCTCAAGCATGTCAGCACTGTTGGAGTGGACGATACCGAAGCATGGTaGAGCATCCTGGTTGGTGAA +
Preference number: 4 (lower is better)
Translates to: IRSTPLGFLKHVSTVGVDDTEAW*SILVGE
Trigger: TTCACCAACCAGGATGCTTCACCATGCTTCGGTATC...GTCCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR GCA 90 bp ATTAGGTCAACACCCCTTGGATTTCTCAAGCATGTCAGCACTGTTGGAGTGGACAGATCAGTGGGATCCTaGATTACTGGTGGCAGAACC +
Preference number: 4 (lower is better)
Translates to: IRSTPLGFLKHVSTVGVDRSVGS*ITGGRT
Trigger: GGTTCTGCCACCAGTAATGCAGGATCCCACTGATCT...GTCCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp TACCAGCGAGAACAACCATGTGATTACATAGCTGGTGCTTTGAGTCAGCCTGACAGCCTCCTGAGAAACTaGGACTACAGACATGCACCA +
Preference number: 4 (lower is better)
Translates to: YQREQPCDYIAGALSQPDSLLRN*DYRHAP
Trigger: TGGTGCATGTCTGTAGTCCCAGTTTCTCAGGAGGCT...GTCAGGCTGACTCAAAGCACCAGCTATGTAATCACATGGTTGTTCTCGCTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp TACCAGCGAGAACAACCATGTGATTACATAGCTGGTGCTTTGAGTCAGCCTGACGGGATCCTGCATTACTaGTGGCAGAACCACTGTAAG +
Preference number: 4 (lower is better)
Translates to: YQREQPCDYIAGALSQPDGILHY*WQNHCK
Trigger: CTTACAGTGGTTCTGCCACCAGTAATGCAGGATCCC...GTCAGGCTGACTCAAAGCACCAGCTATGTAATCACATGGTTGTTCTCGCTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp TTCCAGACCTTAGTAACTCTAGCCATAGTCTCTATCAATGGAAATGCACTCCCTGTCTCAGGATGGCCATaGTGGAGGAGATGGGTGTCA +
Preference number: 4 (lower is better)
Translates to: FQTLVTLAIVSINGNALPVSGWP*WRRWVS
Trigger: TGACACCCATCTCCTCCATCATGGCCATCCTGAGAC...AGGGAGTGCATTTCCATTGATAGAGACTATGGCTAGAGTTACTAAGGTCTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp TTCCAGACCTTAGTAACTCTAGCCATAGTCTCTATCAATGGAAATGCACTCCCTGGCAGGTGGATCTCTTaGGCCCAGGAATTTAAGGCC +
Preference number: 4 (lower is better)
Translates to: FQTLVTLAIVSINGNALPGRWIS*AQEFKA
Trigger: GGCCTTAAATTCCTGGGCTCAAGAGATCCACCTGCC...AGGGAGTGCATTTCCATTGATAGAGACTATGGCTAGAGTTACTAAGGTCTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR GCA 90 bp ATTAGGTCAACACCCCTTGGATTTCTCAAGCATGTCAGCACTGTTGGAGTGGACTTTCCTGCTTGCCGCTaGCATCTAAGAAGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: IRSTPLGFLKHVSTVGVDFPACR*HLRSAF
Trigger: AAAGGCACTTCTTAGATGGCAGCGGCAAGCAGGAAA...GTCCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp CTTGATGTTTGGCAATGGAGTCTCAGTCTACACGAGGGAGCTGTTTACACGGTCATGCACCACCACGCCTaGCTAATTGTTTTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: LDVWQWSLSLHEGAVYTVMHHHA*LIVFGF
Trigger: AAACCCAAAAACAATTAGCCAGGCGTGGTGGTGCAT...GACCGTGTAAACAGCTCCCTCGTGTAGACTGAGACTCCATTGCCAAACATCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp ATTAGGTCAACACCCCTTGGATTTCTCAAGCATGTCAGCACTGTTGGAGTGGACTTGCCCCAGGATCAGTaGTTCTCAAACTATACAGGC +
Preference number: 4 (lower is better)
Translates to: IRSTPLGFLKHVSTVGVDLPQDQ*FSNYTG
Trigger: GCCTGTATAGTTTGAGAACCACTGATCCTGGGGCAA...GTCCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp ATTAGGTCAACACCCCTTGGATTTCTCAAGCATGTCAGCACTGTTGGAGTGGACGTTCAGAGAGATCAGTaGGATCCTGCATTACTGGTG +
Preference number: 4 (lower is better)
Translates to: IRSTPLGFLKHVSTVGVDVQRDQ*DPALLV
Trigger: CACCAGTAATGCAGGATCCCACTGATCTCTCTGAAC...GTCCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp TTCCAGACCTTAGTAACTCTAGCCATAGTCTCTATCAATGGAAATGCACTCCCTAGAACAGGGTCCATTTaGGGTCCACACCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: FQTLVTLAIVSINGNALPRTGSI*GPHQPL
Trigger: AAGTGGCTGGTGTGGACCTCAAATGGACCCTGTTCT...AGGGAGTGCATTTCCATTGATAGAGACTATGGCTAGAGTTACTAAGGTCTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp GATTTGTCTGTGCTGCCAGGAATGTTTATCACTCCATCAACTCGTCCTTTAATAGGCTGGAAGATGAGATaGCCCAAGATGGAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: DLSVLPGMFITPSTRPLIGWKMR*PKMEAS
Trigger: ACTGGCCTCCATCTTGGGTCATCTCATCTTCCAGCC...TATTAAAGGACGAGTTGATGGAGTGATAAACATTCCTGGCAGCACAGACAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp ATTAGGTCAACACCCCTTGGATTTCTCAAGCATGTCAGCACTGTTGGAGTGGACCTTGTGTTTGTTGTGTaGCATAGCGTGCACAGTATG +
Preference number: 4 (lower is better)
Translates to: IRSTPLGFLKHVSTVGVDLVFVV*HSVHSM
Trigger: CATACTGTGCACGCTATGTCACACAACAAACACAAG...GTCCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp CTTGATGTTTGGCAATGGAGTCTCAGTCTACACGAGGGAGCTGTTTACACGGTCTTCATTCTGTGCAGATaGATGAGTACCATTTCCACG +
Preference number: 4 (lower is better)
Translates to: LDVWQWSLSLHEGAVYTVFILCR*MSTIST
Trigger: CGTGGAAATGGTACTCATTCATCTGCACAGAATGAA...GACCGTGTAAACAGCTCCCTCGTGTAGACTGAGACTCCATTGCCAAACATCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR GCA 90 bp GAAGATGATCAGATGGTATATGTCCAAAGTGAAGGCAAGGTTGGTCATTTAGGCATCAAACCATCCTCCTaGCTCAGCCTCCCAAAAGGC +
Preference number: 4 (lower is better)
Translates to: EDDQMVYVQSEGKVGHLGIKPSS*LSLPKG
Trigger: GCCTTTTGGGAGGCTGAGGCAGGAGGATGGTTTGAT...GCCTAAATGACCAACCTTGCCTTCACTTTGGACATATACCATCTGATCATCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp ATTAGGTCAACACCCCTTGGATTTCTCAAGCATGTCAGCACTGTTGGAGTGGACGTCAGCTCCCGAATATaGACCTGTCCTAAAATGTGT +
Preference number: 4 (lower is better)
Translates to: IRSTPLGFLKHVSTVGVDVSSRI*TCPKMC
Trigger: ACACATTTTAGGACAGGTCCATATTCGGGAGCTGAC...GTCCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp TACCAGCGAGAACAACCATGTGATTACATAGCTGGTGCTTTGAGTCAGCCTGACAGTGTCATCATGAAATaGGACGTGTGGGTGTGTGAA +
Preference number: 4 (lower is better)
Translates to: YQREQPCDYIAGALSQPDSVIMK*DVWVCE
Trigger: TTCACACACCCACACGTCCCATTTCATGATGACACT...GTCAGGCTGACTCAAAGCACCAGCTATGTAATCACATGGTTGTTCTCGCTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp ATTAGGTCAACACCCCTTGGATTTCTCAAGCATGTCAGCACTGTTGGAGTGGACGCATGTCAGCACTGTTaGAGTGGACCATCTTTATCT +
Preference number: 4 (lower is better)
Translates to: IRSTPLGFLKHVSTVGVDACQHC*SGPSLS
Trigger: AGATAAAGATGGTCCACTCCAACAGTGCTGACATGC...GTCCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR CAA 72 bp ATGGTTTGTGGGCTGTGTCCCCACCCAAATCTCATCTaGAATTGTACTCGCATAATCCCCACATGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: MVCGLCPHPNLI*NCTRIIPTCCE
Trigger: CTCACAACATGTGGGGATTATGCGAGTACAATTCAAGATGAGATTTGGGTGGGGACACAGCCCACAAACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR CAA 72 bp CAACACCCCTTGGATTTCTCAAGCATGTCAGCACTGTaGGAGTGGACCATCTTTATCTTTTGGCCTCAGTTC +
Preference number: 4 (lower is better)
Translates to: QHPLDFSSMSAL*EWTIFIFWPQF
Trigger: GAACTGAGGCCAAAAGATAAAGATGGTCCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp TTCCAGACCTTAGTAACTCTAGCCATAGTCTCTATCAATGGAAATGCACTCCCTCAGTGGCTCATGCCTTaGTTATGGTTTGTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: FQTLVTLAIVSINGNALPQWLMP*LWFVGC
Trigger: ACAGCCCACAAACCATAATCAAGGCATGAGCCACTG...AGGGAGTGCATTTCCATTGATAGAGACTATGGCTAGAGTTACTAAGGTCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp CTTGATGTTTGGCAATGGAGTCTCAGTCTACACGAGGGAGCTGTTTACACGGTCGTTGTAGAATGTACATaGAGCTACTGGTACTTACAC +
Preference number: 4 (lower is better)
Translates to: LDVWQWSLSLHEGAVYTVVVECT*SYWYLH
Trigger: GTGTAAGTACCAGTAGCTTCATGTACATTCTACAAC...GACCGTGTAAACAGCTCCCTCGTGTAGACTGAGACTCCATTGCCAAACATCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp TACCAGCGAGAACAACCATGTGATTACATAGCTGGTGCTTTGAGTCAGCCTGACCTTGCTGTTAATGCTTaGTGTTTGGCAATGGAGTCT +
Preference number: 4 (lower is better)
Translates to: YQREQPCDYIAGALSQPDLAVNA*CLAMES
Trigger: AGACTCCATTGCCAAACATCAAGCATTAACAGCAAG...GTCAGGCTGACTCAAAGCACCAGCTATGTAATCACATGGTTGTTCTCGCTGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR GCA 90 bp TACCAGCGAGAACAACCATGTGATTACATAGCTGGTGCTTTGAGTCAGCCTGACCTGCCATCTAAGAAGTaGCTTTTGCCTTCTACCATA +
Preference number: 4 (lower is better)
Translates to: YQREQPCDYIAGALSQPDLPSKK*LLPSTI
Trigger: TATGGTAGAAGGCAAAAGGCACTTCTTAGATGGCAG...GTCAGGCTGACTCAAAGCACCAGCTATGTAATCACATGGTTGTTCTCGCTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR GCA 90 bp GAAGATGATCAGATGGTATATGTCCAAAGTGAAGGCAAGGTTGGTCATTTAGGCCTTGGCCTCCCAATGTaGTCAGATTACAGGTGTGAG +
Preference number: 4 (lower is better)
Translates to: EDDQMVYVQSEGKVGHLGLGLPM*SDYRCE
Trigger: CTCACACCTGTAATCTGAGCACATTGGGAGGCCAAG...GCCTAAATGACCAACCTTGCCTTCACTTTGGACATATACCATCTGATCATCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp CTTGATGTTTGGCAATGGAGTCTCAGTCTACACGAGGGAGCTGTTTACACGGTCTCAGAAGGTCCAGTCTaGAATCTGCTCAAAGAATTT +
Preference number: 4 (lower is better)
Translates to: LDVWQWSLSLHEGAVYTVSEGPV*NLLKEF
Trigger: AAATTCTTTGAGCAGATTCCAGACTGGACCTTCTGA...GACCGTGTAAACAGCTCCCTCGTGTAGACTGAGACTCCATTGCCAAACATCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp ATTAGGTCAACACCCCTTGGATTTCTCAAGCATGTCAGCACTGTTGGAGTGGACATAGGAGAAATGAAGTaGGTGAGTGACAGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: IRSTPLGFLKHVSTVGVDIGEMK*VSDRRK
Trigger: CTTCCTTCTGTCACTCACCCACTTCATTTCTCCTAT...GTCCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp TTCCAGACCTTAGTAACTCTAGCCATAGTCTCTATCAATGGAAATGCACTCCCTGTAAGCCACTGTGCCTaGCATCAGGGATCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: FQTLVTLAIVSINGNALPVSHCA*HQGSLS
Trigger: AGAAAGAGATCCCTGATGCCAGGCACAGTGGCTTAC...AGGGAGTGCATTTCCATTGATAGAGACTATGGCTAGAGTTACTAAGGTCTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp GGAACTGTGAGTCCAATAAACCTATTTTTCTTCCCAGTCTTAGGTATGTCTTTAGGTGATGCACGCCTGTaGTCCCAGATACTTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GTVSPINLFFFPVLGMSLGDARL*SQILGR
Trigger: CCTCCCAAGTATCTGGGACCACAGGCGTGCATCACC...TAAAGACATACCTAAGACTGGGAAGAAAAATAGGTTTATTGGACTCACAGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp CTTGATGTTTGGCAATGGAGTCTCAGTCTACACGAGGGAGCTGTTTACACGGTCAATTTAAGGCCAACCTaGGCAACATGGCAAAAGTTT +
Preference number: 4 (lower is better)
Translates to: LDVWQWSLSLHEGAVYTVNLRPT*ATWQKF
Trigger: AAACTTTTGCCATGTTGCCCAGGTTGGCCTTAAATT...GACCGTGTAAACAGCTCCCTCGTGTAGACTGAGACTCCATTGCCAAACATCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp GAAGATGATCAGATGGTATATGTCCAAAGTGAAGGCAAGGTTGGTCATTTAGGCTTAAAGAGATTTCCCTaGCCTGGCATGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: EDDQMVYVQSEGKVGHLGLKRFP*PGMVAH
Trigger: GTGAGCCACCATGCCAGGCCAGGGAAATCTCTTTAA...GCCTAAATGACCAACCTTGCCTTCACTTTGGACATATACCATCTGATCATCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp GAAGATGATCAGATGGTATATGTCCAAAGTGAAGGCAAGGTTGGTCATTTAGGCGACAGAAGAATCACTTaGACCTGGGAGGTGGAAGTT +
Preference number: 4 (lower is better)
Translates to: EDDQMVYVQSEGKVGHLGDRRIT*TWEVEV
Trigger: AACTTCCACCTCCCAGGTTCAAGTGATTCTTCTGTC...GCCTAAATGACCAACCTTGCCTTCACTTTGGACATATACCATCTGATCATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp TACCAGCGAGAACAACCATGTGATTACATAGCTGGTGCTTTGAGTCAGCCTGACAGAAATCGAGGAAGATaGTCAGATGGTATATGTCCA +
Preference number: 4 (lower is better)
Translates to: YQREQPCDYIAGALSQPDRNRGR*SDGICP
Trigger: TGGACATATACCATCTGATCATCTTCCTCGATTTCT...GTCAGGCTGACTCAAAGCACCAGCTATGTAATCACATGGTTGTTCTCGCTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp GATTTGTCTGTGCTGCCAGGAATGTTTATCACTCCATCAACTCGTCCTTTAATAATTTGGGCTGGAAGATaGGATGACCCAAGATGGAGG +
Preference number: 4 (lower is better)
Translates to: DLSVLPGMFITPSTRPLIIWAGR*DDPRWR
Trigger: CCTCCATCTTGGGTCATCTCATCTTCCAGCCCAAAT...TATTAAAGGACGAGTTGATGGAGTGATAAACATTCCTGGCAGCACAGACAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR GCA 90 bp GATTTGTCTGTGCTGCCAGGAATGTTTATCACTCCATCAACTCGTCCTTTAATAGATGACCACCTGGGCTaGTCTTTCCAAGATGGCTTT +
Preference number: 4 (lower is better)
Translates to: DLSVLPGMFITPSTRPLIDDHLG*SFQDGF
Trigger: AAAGCCATCTTGGAAAGAGCAGCCCAGGTGGTCATC...TATTAAAGGACGAGTTGATGGAGTGATAAACATTCCTGGCAGCACAGACAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR GCA 90 bp ATTAGGTCAACACCCCTTGGATTTCTCAAGCATGTCAGCACTGTTGGAGTGGACTTGATTTGTCTGTGCTaGCAGGAATGTTTATCACTC +
Preference number: 4 (lower is better)
Translates to: IRSTPLGFLKHVSTVGVDLICLC*QECLSL
Trigger: GAGTGATAAACATTCCTGGCAGCACAGACAAATCAA...GTCCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp GAAGATGATCAGATGGTATATGTCCAAAGTGAAGGCAAGGTTGGTCATTTAGGCGAAACCTGGACCTCTTaGGCTCAAGTTATCCTCTCA +
Preference number: 4 (lower is better)
Translates to: EDDQMVYVQSEGKVGHLGETWTS*AQVILS
Trigger: TGAGAGGATAACTTGAGCCCAAGAGGTCCAGGTTTC...GCCTAAATGACCAACCTTGCCTTCACTTTGGACATATACCATCTGATCATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp CTTGATGTTTGGCAATGGAGTCTCAGTCTACACGAGGGAGCTGTTTACACGGTCTTAATGCTTGATGTTTaGCAATGGAGTCTCAGTCTA +
Preference number: 4 (lower is better)
Translates to: LDVWQWSLSLHEGAVYTVLMLDV*QWSLSL
Trigger: TAGACTGAGACTCCATTGCCAAACATCAAGCATTAA...GACCGTGTAAACAGCTCCCTCGTGTAGACTGAGACTCCATTGCCAAACATCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp ATTAGGTCAACACCCCTTGGATTTCTCAAGCATGTCAGCACTGTTGGAGTGGACTATGTGTCTCTCCATTaGCTGGTCCTAACTTATATC +
Preference number: 4 (lower is better)
Translates to: IRSTPLGFLKHVSTVGVDYVSLH*LVLTYI
Trigger: GATATAAGTTAGGACCAGCCAATGGAGAGACACATA...GTCCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp GATTTGTCTGTGCTGCCAGGAATGTTTATCACTCCATCAACTCGTCCTTTAATAACTGGCTTTTGTCTCTaGTTCCTAGGAGGCAGACTC +
Preference number: 4 (lower is better)
Translates to: DLSVLPGMFITPSTRPLITGFCL*FLGGRL
Trigger: GAGTCTGCCTCCTAGGAACCAGAGACAAAAGCCAGT...TATTAAAGGACGAGTTGATGGAGTGATAAACATTCCTGGCAGCACAGACAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR CAA 72 bp GTCTCCTATATCCTTTTTACATTAGGTCAACACCCCTaGGATTTCTCAAGCATGTCAGCACTGTTGGAGTGG +
Preference number: 4 (lower is better)
Translates to: VSYILFTLGQHP*DFSSMSALLEW
Trigger: CCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAATGTAAAAAGGATATAGGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp GATTTGTCTGTGCTGCCAGGAATGTTTATCACTCCATCAACTCGTCCTTTAATAAGATTTGTAGCCAATTaGCTGGGGACTCCCAAAGTG +
Preference number: 4 (lower is better)
Translates to: DLSVLPGMFITPSTRPLIRFVAN*LGTPKV
Trigger: CACTTTGGGAGTCCCCAGTCAATTGGCTACAAATCT...TATTAAAGGACGAGTTGATGGAGTGATAAACATTCCTGGCAGCACAGACAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR GCA 90 bp GATTTGTCTGTGCTGCCAGGAATGTTTATCACTCCATCAACTCGTCCTTTAATAAGGCACAGTGGCTCATaGCTTGATTATGGTTTGTGG +
Preference number: 4 (lower is better)
Translates to: DLSVLPGMFITPSTRPLIRHSGS*LDYGLW
Trigger: CCACAAACCATAATCAAGGCATGAGCCACTGTGCCT...TATTAAAGGACGAGTTGATGGAGTGATAAACATTCCTGGCAGCACAGACAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp GGAACTGTGAGTCCAATAAACCTATTTTTCTTCCCAGTCTTAGGTATGTCTTTACTGGTCTGGAACTCCTaGCATCAAACCATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GTVSPINLFFFPVLGMSLLVWNS*HQTILL
Trigger: CAGGAGGATGGTTTGATGCCAGGAGTTCCAGACCAG...TAAAGACATACCTAAGACTGGGAAGAAAAATAGGTTTATTGGACTCACAGTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp TACCAGCGAGAACAACCATGTGATTACATAGCTGGTGCTTTGAGTCAGCCTGACACCATCTTTATCTTTTaGCCTCAGTTCCAAATATGC +
Preference number: 4 (lower is better)
Translates to: YQREQPCDYIAGALSQPDTIFIF*PQFQIC
Trigger: GCATATTTGGAACTGAGGCCAAAAGATAAAGATGGT...GTCAGGCTGACTCAAAGCACCAGCTATGTAATCACATGGTTGTTCTCGCTGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp TACCAGCGAGAACAACCATGTGATTACATAGCTGGTGCTTTGAGTCAGCCTGACGACACAAATGAGAAGTaGTCATTGTCATCATGCTTT +
Preference number: 4 (lower is better)
Translates to: YQREQPCDYIAGALSQPDDTNEK*SLSSCF
Trigger: AAAGCATGATGACAATGACCACTTCTCATTTGTGTC...GTCAGGCTGACTCAAAGCACCAGCTATGTAATCACATGGTTGTTCTCGCTGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp GAAGATGATCAGATGGTATATGTCCAAAGTGAAGGCAAGGTTGGTCATTTAGGCTTTGACATATCAGTCTaGCTGGTTCCCAGTGAACTT +
Preference number: 4 (lower is better)
Translates to: EDDQMVYVQSEGKVGHLGFDISV*LVPSEL
Trigger: AAGTTCACTGGGAACCAGTCAGACTGATATGTCAAA...GCCTAAATGACCAACCTTGCCTTCACTTTGGACATATACCATCTGATCATCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp GATTTGTCTGTGCTGCCAGGAATGTTTATCACTCCATCAACTCGTCCTTTAATAGCAAATCGGCAAACCTaGAGGAAATCTTCAGAAACC +
Preference number: 4 (lower is better)
Translates to: DLSVLPGMFITPSTRPLIANRQT*RKSSET
Trigger: GGTTTCTGAAGATTTCCTTCAGGTTTGCCGATTTGC...TATTAAAGGACGAGTTGATGGAGTGATAAACATTCCTGGCAGCACAGACAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp GATTTGTCTGTGCTGCCAGGAATGTTTATCACTCCATCAACTCGTCCTTTAATAAACATATCAATGTGTTaGGAGGGTGACACACCCGAT +
Preference number: 4 (lower is better)
Translates to: DLSVLPGMFITPSTRPLINISMC*EGDTPD
Trigger: ATCGGGTGTGTCACCCTCTCAACACATTGATATGTT...TATTAAAGGACGAGTTGATGGAGTGATAAACATTCCTGGCAGCACAGACAAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp GAAGATGATCAGATGGTATATGTCCAAAGTGAAGGCAAGGTTGGTCATTTAGGCTTCTGTGCAGATGAATaGGTACCATTTCCACGAGTT +
Preference number: 4 (lower is better)
Translates to: EDDQMVYVQSEGKVGHLGFCADE*VPFPRV
Trigger: AACTCGTGGAAATGGTACTCATTCATCTGCACAGAA...GCCTAAATGACCAACCTTGCCTTCACTTTGGACATATACCATCTGATCATCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR GCA 90 bp GGAACTGTGAGTCCAATAAACCTATTTTTCTTCCCAGTCTTAGGTATGTCTTTACTGAGCTTGCATCACTaGACTCCAGTCAGAGGAAGA +
Preference number: 4 (lower is better)
Translates to: GTVSPINLFFFPVLGMSLLSLHH*TPVRGR
Trigger: TCTTCCTCTGACTGGAGTGCAGTGATGCAAGCTCAG...TAAAGACATACCTAAGACTGGGAAGAAAAATAGGTTTATTGGACTCACAGTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR GCA 90 bp GGAACTGTGAGTCCAATAAACCTATTTTTCTTCCCAGTCTTAGGTATGTCTTTAGAGACTTTGAGTCCTTaGCCCAGGATCAGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: GTVSPINLFFFPVLGMSLETLSP*PRISGS
Trigger: AGAACCACTGATCCTGGGGCAAGGACTCAAAGTCTC...TAAAGACATACCTAAGACTGGGAAGAAAAATAGGTTTATTGGACTCACAGTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR GCA 90 bp TTCCAGACCTTAGTAACTCTAGCCATAGTCTCTATCAATGGAAATGCACTCCCTTGGTCATTGTCATCATaGTTTGCTCCCTTGGCAATA +
Preference number: 4 (lower is better)
Translates to: FQTLVTLAIVSINGNALPWSLSS*FAPLAI
Trigger: TATTGCCAAGGGAGCAAAGCATGATGACAATGACCA...AGGGAGTGCATTTCCATTGATAGAGACTATGGCTAGAGTTACTAAGGTCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp GGAACTGTGAGTCCAATAAACCTATTTTTCTTCCCAGTCTTAGGTATGTCTTTAGGGGTTTCACTGCATTaGCCAGGCTGGTCTTTAACT +
Preference number: 4 (lower is better)
Translates to: GTVSPINLFFFPVLGMSLGVSLH*PGWSLT
Trigger: AGTTAAAGACCAGCCTGGCCAATGCAGTGAAACCCC...TAAAGACATACCTAAGACTGGGAAGAAAAATAGGTTTATTGGACTCACAGTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp TTCCAGACCTTAGTAACTCTAGCCATAGTCTCTATCAATGGAAATGCACTCCCTCATGGTGAAGCATCCTaGTTGGTGAACATATCAATG +
Preference number: 4 (lower is better)
Translates to: FQTLVTLAIVSINGNALPHGEAS*LVNISM
Trigger: CATTGATATGTTCACCAACCAGGATGCTTCACCATG...AGGGAGTGCATTTCCATTGATAGAGACTATGGCTAGAGTTACTAAGGTCTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR CAA 72 bp ACTCCACCATTGGCAAGTTCAATAGACTTGTGTTTGTaGTGTGACATAGCGTGCACAGTATGTTTTCACATG +
Preference number: 4 (lower is better)
Translates to: TPPLASSIDLCL*CDIACTVCFHM
Trigger: CATGTGAAAACATACTGTGCACGCTATGTCACACAACAAACACAAGTCTATTGAACTTGCCAATGGTGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
3UTR CAA 72 bp AACACTCCACCATTGGCAAGTTCAATAGACTTGTGTTaGTTGTGTGACATAGCGTGCACAGTATGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: NTPPLASSIDLC*LCDIACTVCFH
Trigger: GTGAAAACATACTGTGCACGCTATGTCACACAACAAACACAAGTCTATTGAACTTGCCAATGGTGGAGTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp GGAACTGTGAGTCCAATAAACCTATTTTTCTTCCCAGTCTTAGGTATGTCTTTAACAAACATGACTCATTaGAACCTGGACCTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: GTVSPINLFFFPVLGMSLTNMTH*NLDLLG
Trigger: GCCCAAGAGGTCCAGGTTTCAATGAGTCATGTTTGT...TAAAGACATACCTAAGACTGGGAAGAAAAATAGGTTTATTGGACTCACAGTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR TCA 90 bp GATTTGTCTGTGCTGCCAGGAATGTTTATCACTCCATCAACTCGTCCTTTAATAGGTATATGTCCAAAGTaGAGGCAAGGTTGGTCATTT +
Preference number: 4 (lower is better)
Translates to: DLSVLPGMFITPSTRPLIGICPK*RQGWSF
Trigger: AAATGACCAACCTTGCCTTCACTTTGGACATATACC...TATTAAAGGACGAGTTGATGGAGTGATAAACATTCCTGGCAGCACAGACAAATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp TTCCAGACCTTAGTAACTCTAGCCATAGTCTCTATCAATGGAAATGCACTCCCTATGAAATGGGACGTGTaGGTGTGTGAAAAGAAAATC +
Preference number: 4 (lower is better)
Translates to: FQTLVTLAIVSINGNALPMKWDV*VCEKKI
Trigger: GATTTTCTTTTCACACACCCACACGTCCCATTTCAT...AGGGAGTGCATTTCCATTGATAGAGACTATGGCTAGAGTTACTAAGGTCTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp GTGAATTTCACCAAACACAATACACGGCACCTAAAACTGGCTAAGCTATCTAGGAAGAGGAAAAGCTCTTaGTCGAATGCTCAGAATTAC +
Preference number: 4 (lower is better)
Translates to: VNFTKHNTRHLKLAKLSRKRKSS*SNAQNY
Trigger: GTAATTCTGAGCATTCGACCAAGAGCTTTTCCTCTT...CCTAGATAGCTTAGCCAGTTTTAGGTGCCGTGTATTGTGTTTGGTGAAATTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554075.2
CDS-3UTR TCA 90 bp GATTTGTCTGTGCTGCCAGGAATGTTTATCACTCCATCAACTCGTCCTTTAATATTCAGAAGCTATATTTaGCAGAACTGGCCTAAGACA +
Preference number: 4 (lower is better)
Translates to: DLSVLPGMFITPSTRPLIFRSYI*QNWPKT
Trigger: TGTCTTAGGCCAGTTCTGTCAAATATAGCTTCTGAA...TATTAAAGGACGAGTTGATGGAGTGATAAACATTCCTGGCAGCACAGACAAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR GCA 90 bp GAAGATGATCAGATGGTATATGTCCAAAGTGAAGGCAAGGTTGGTCATTTAGGCTTGTTGATTTGTCTGTaGTGCCAGGAATGTTTATCA +
Preference number: 4 (lower is better)
Translates to: EDDQMVYVQSEGKVGHLGLLICL*CQECLS
Trigger: TGATAAACATTCCTGGCAGCACAGACAAATCAACAA...GCCTAAATGACCAACCTTGCCTTCACTTTGGACATATACCATCTGATCATCTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp GGAACTGTGAGTCCAATAAACCTATTTTTCTTCCCAGTCTTAGGTATGTCTTTAACATATCAGTCTGACTaGTTCCCAGTGAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: GTVSPINLFFFPVLGMSLTYQSD*FPVNLV
Trigger: CACCAAGTTCACTGGGAACCAGTCAGACTGATATGT...TAAAGACATACCTAAGACTGGGAAGAAAAATAGGTTTATTGGACTCACAGTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp GATTTGTCTGTGCTGCCAGGAATGTTTATCACTCCATCAACTCGTCCTTTAATAACAATTAAACCACACTaGGCAGAGGACTATTCAGAA +
Preference number: 4 (lower is better)
Translates to: DLSVLPGMFITPSTRPLITIKPH*AEDYSE
Trigger: TTCTGAATAGTCCTCTGCCCAGTGTGGTTTAATTGT...TATTAAAGGACGAGTTGATGGAGTGATAAACATTCCTGGCAGCACAGACAAATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp GGAACTGTGAGTCCAATAAACCTATTTTTCTTCCCAGTCTTAGGTATGTCTTTAAAGGGGAAGGCATTATaGTTCTACAGGCCTTCAATA +
Preference number: 4 (lower is better)
Translates to: GTVSPINLFFFPVLGMSLKGKAL*FYRPSI
Trigger: TATTGAAGGCCTGTAGAACCATAATGCCTTCCCCTT...TAAAGACATACCTAAGACTGGGAAGAAAAATAGGTTTATTGGACTCACAGTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR GCA 90 bp GGAACTGTGAGTCCAATAAACCTATTTTTCTTCCCAGTCTTAGGTATGTCTTTATTGTGTGACATAGCGTaGACAGTATGTTTTCACATG +
Preference number: 4 (lower is better)
Translates to: GTVSPINLFFFPVLGMSLLCDIA*TVCFHM
Trigger: CATGTGAAAACATACTGTGCACGCTATGTCACACAA...TAAAGACATACCTAAGACTGGGAAGAAAAATAGGTTTATTGGACTCACAGTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR GCA 90 bp GGAACTGTGAGTCCAATAAACCTATTTTTCTTCCCAGTCTTAGGTATGTCTTTAATTGTCATCATGCTTTaGTCCCTTGGCAATAAAGAA +
Preference number: 4 (lower is better)
Translates to: GTVSPINLFFFPVLGMSLIVIML*SLGNKE
Trigger: TTCTTTATTGCCAAGGGAGCAAAGCATGATGACAAT...TAAAGACATACCTAAGACTGGGAAGAAAAATAGGTTTATTGGACTCACAGTTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CCA 90 bp GGAACTGTGAGTCCAATAAACCTATTTTTCTTCCCAGTCTTAGGTATGTCTTTAAGATATTACTCTTTATaGGCAACTGTTAGGGGTTTT +
Preference number: 4 (lower is better)
Translates to: GTVSPINLFFFPVLGMSLRYYSL*ATVRGF
Trigger: AAAACCCCTAACAGTTGCCCATAAAGAGTAATATCT...TAAAGACATACCTAAGACTGGGAAGAAAAATAGGTTTATTGGACTCACAGTTCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS CCA 90 bp GCCCCCGCCGACTGCCGGTTTCCCGGGCGCGAGCCCGGATCCAGGTaGTCAGTCCCGGTACGCAACCACGGCGAGAACCCGGCCCTGCTA +
Preference number: 5 (lower is better)
Translates to: APADCRFPGREPGSR*SVPVRNHGENPALL
Trigger: TAGCAGGGCCGGGTTCTCGCCGTGGTTGCGTACCGGGACTGACCACCTGGATCCGGGCTCGCGCCCGGGAAACCGGCAGTCGGCGGGGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539688.1
CDS GCA 90 bp TCGCGGACCAGTCCAACAGGCAGGCAGATCAGTGGGCAGCCCGCGTaGGCGAGGACCCCGATGGCGGCGCCGGGTGGCGGGAAGGAGGAA +
Preference number: 5 (lower is better)
Translates to: SRTSPTGRQISGQPA*ARTPMAAPGGGKEE
Trigger: TTCCTCCTTCCCGCCACCCGGCGCCGCCATCGGGGTCCTCGCGCACGCGGGCTGCCCACTGATCTGCCTGCCTGTTGGACTGGTCCGCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539688.1
CDS CCA 90 bp AAGACAGCCCGAGTCGCGGACCAGTCCAACAGGCAGGCAGATCAGTaGGCAGCCCGCGTGCGCGAGGACCCCGATGGCGGCGCCGGGTGG +
Preference number: 5 (lower is better)
Translates to: KTARVADQSNRQADQ*AARVREDPDGGAGW
Trigger: CCACCCGGCGCCGCCATCGGGGTCCTCGCGCACGCGGGCTGCCCACTGATCTGCCTGCCTGTTGGACTGGTCCGCGACTCGGGCTGTCTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539688.1
CDS CCA 90 bp CAGGCAGGCAGATCAGTGGGCAGCCCGCGTGCGCGAGGACCCCGATaGCGGCGCCGGGTGGCGGGAAGGAGGAAGTTTCAAAGCCAGCTT +
Preference number: 5 (lower is better)
Translates to: QAGRSVGSPRARGPR*RRRVAGRRKFQSQL
Trigger: AAGCTGGCTTTGAAACTTCCTCCTTCCCGCCACCCGGCGCCGCCATCGGGGTCCTCGCGCACGCGGGCTGCCCACTGATCTGCCTGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539688.1
CDS TCA 90 bp CCGCCTTGGGGCTTAGGAACCGGGGCAAGGGCGTCCGAGCCGTGTTaGGCCTCTGTCAGCAGACTTCCAGGAGTCAGCCGCCGGTCCGAG +
Preference number: 5 (lower is better)
Translates to: PPWGLGTGARASEPC*ASVSRLPGVSRRSE
Trigger: CTCGGACCGGCGGCTGACTCCTGGAAGTCTGCTGACAGAGGCTCAACACGGCTCGGACGCCCTTGCCCCGGTTCCTAAGCCCCAAGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539688.1
CDS CCA 90 bp GCGGCACCAGCGACTCCCAGTCGGCGTGCTCCCTCGTGCCGCCCGTaGCCTCCTCTACTTGAGATTTTAAGCAGCCTAGCGCTCCACGGC +
Preference number: 5 (lower is better)
Translates to: AAPATPSRRAPSCRP*PPLLEILSSLALHG
Trigger: GCCGTGGAGCGCTAGGCTGCTTAAAATCTCAAGTAGAGGAGGCCACGGGCGGCACGAGGGAGCACGCCGACTGGGAGTCGCTGGTGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557367.2
CDS GCA 90 bp GAGAGCAGCCACCAAAACCACCAGCAGCCCGTCCGCGCCGGGAAATaGGCCCTCGCTGGCTTACGGGGCCACTCAGACAGTTCTAAGTGC +
Preference number: 5 (lower is better)
Translates to: ESSHQNHQQPVRAGK*ALAGLRGHSDSSKC
Trigger: GCACTTAGAACTGTCTGAGTGGCCCCGTAAGCCAGCGAGGGCGCATTTCCCGGCGCGGACGGGCTGCTGGTGGTTTTGGTGGCTGCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539688.1
ENST00000556230.2
ENST00000557111.5
CDS GCA 90 bp CCTGTAATGGCGGCACCAGCGACTCCCAGTCGGCGTGCTCCCTCGTaGCGCCCGTGGCCTCCTCTACTTGAGATTTTAAGCAGCCTAGCG +
Preference number: 5 (lower is better)
Translates to: PVMAAPATPSRRAPS*RPWPPLLEILSSLA
Trigger: CGCTAGGCTGCTTAAAATCTCAAGTAGAGGAGGCCACGGGCGGCACGAGGGAGCACGCCGACTGGGAGTCGCTGGTGCCGCCATTACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557367.2
CDS TCA 90 bp TCCCAGTCGGCGTGCTCCCTCGTGCCGCCCGTGGCCTCCTCTACTTaGGATTTTAAGCAGCCTAGCGCTCCACGGCAACGCTTCCCCAAA +
Preference number: 5 (lower is better)
Translates to: SQSACSLVPPVASST*DFKQPSAPRQRFPK
Trigger: TTTGGGGAAGCGTTGCCGTGGAGCGCTAGGCTGCTTAAAATCTCAAGTAGAGGAGGCCACGGGCGGCACGAGGGAGCACGCCGACTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557367.2
CDS CCA 90 bp GGCGCCGGGTGGCGGGAAGGAGGAAGTTTCAAAGCCAGCTTGACGTaGTTGTGGCCGTTGGGCGAGATGAAGCTACACTGTGAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: GAGWREGGSFKASLT*LWPLGEMKLHCEVE
Trigger: CTCCACCTCACAGTGTAGCTTCATCTCGCCCAACGGCCACAACCACGTCAAGCTGGCTTTGAAACTTCCTCCTTCCCGCCACCCGGCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539688.1
CDS CCA 90 bp GGGTGGCGGGAAGGAGGAAGTTTCAAAGCCAGCTTGACGTGGTTGTaGCCGTTGGGCGAGATGAAGCTACACTGTGAGGTGGAGGTGATC +
Preference number: 5 (lower is better)
Translates to: GWREGGSFKASLTWL*PLGEMKLHCEVEVI
Trigger: GATCACCTCCACCTCACAGTGTAGCTTCATCTCGCCCAACGGCCACAACCACGTCAAGCTGGCTTTGAAACTTCCTCCTTCCCGCCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539688.1
CDS-3UTR CAA 90 bp TACCAGCGAGAACAACCATGTGATTACATAGCTGGTGCTTTGAGTCAGCCTGACTGCAGTCCTAGCATTTaGGGAGGCCAAGGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: YQREQPCDYIAGALSQPDCSPSI*GGQGRW
Trigger: CCACCTGCCTTGGCCTCCCAAAATGCTAGGACTGCA...GTCAGGCTGACTCAAAGCACCAGCTATGTAATCACATGGTTGTTCTCGCTGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CAA 90 bp TACCAGCGAGAACAACCATGTGATTACATAGCTGGTGCTTTGAGTCAGCCTGACTGCAGAGAGCTGAGCTaGCATCACTGCACTCCAGTC +
Preference number: 5 (lower is better)
Translates to: YQREQPCDYIAGALSQPDCRELS*HHCTPV
Trigger: GACTGGAGTGCAGTGATGCAAGCTCAGCTCTCTGCA...GTCAGGCTGACTCAAAGCACCAGCTATGTAATCACATGGTTGTTCTCGCTGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CAA 90 bp GTGGTGGCAAGAGCCTTTAGTCCCAGCTACTCGGGACGCCAAGGCAAGAGGATCAAAGAGGAAAAGCTCTaGGTCGAATGCTCAGAATTA +
Preference number: 5 (lower is better)
Translates to: VVARAFSPSYSGRQGKRIKEEKL*VECSEL
Trigger: TAATTCTGAGCATTCGACCAAGAGCTTTTCCTCTTT...GATCCTCTTGCCTTGGCGTCCCGAGTAGCTGGGACTAAAGGCTCTTGCCACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554075.2
CDS-3UTR CAA 90 bp TACCAGCGAGAACAACCATGTGATTACATAGCTGGTGCTTTGAGTCAGCCTGACAGAGACTTTGAGTCCTaGCCCCAGGATCAGTGGTTC +
Preference number: 5 (lower is better)
Translates to: YQREQPCDYIAGALSQPDRDFES*PQDQWF
Trigger: GAACCACTGATCCTGGGGCAAGGACTCAAAGTCTCT...GTCAGGCTGACTCAAAGCACCAGCTATGTAATCACATGGTTGTTCTCGCTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CAA 90 bp TGGTGGCAAGAGCCTTTAGTCCCAGCTACTCGGGACGCCAAGGCAAGAGGATCGCTCCATTCTATTAATTaGATTGCCCAAACCATCAAC +
Preference number: 5 (lower is better)
Translates to: WWQEPLVPATRDAKARGSLHSIN*IAQTIN
Trigger: GTTGATGGTTTGGGCAATCAAATTAATAGAATGGAG...CGATCCTCTTGCCTTGGCGTCCCGAGTAGCTGGGACTAAAGGCTCTTGCCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554075.2
CDS GCA 90 bp GTCCTAGTTCAATCAATCAAGAAAATCAAGAGTACGAAGGCCTTGTaGGGTCTGGACGGTCTTTCCACGTCTCAGGTGCAGTTAAGCCAG +
Preference number: 5 (lower is better)
Translates to: VLVQSIKKIKSTKAL*GLDGLSTSQVQLSQ
Trigger: CTGGCTTAACTGCACCTGAGACGTGGAAAGACCGTCCAGACCGCACAAGGCCTTCGTACTCTTGATTTTCTTGATTGATTGAACTAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539688.1
CDS-3UTR CAA 90 bp GAAGATGATCAGATGGTATATGTCCAAAGTGAAGGCAAGGTTGGTCATTTAGGCTGCCTTGATTATGGTTaGTGGGCTGTGTCCCCACCC +
Preference number: 5 (lower is better)
Translates to: EDDQMVYVQSEGKVGHLGCLDYG*WAVSPP
Trigger: GGGTGGGGACACAGCCCACAAACCATAATCAAGGCA...GCCTAAATGACCAACCTTGCCTTCACTTTGGACATATACCATCTGATCATCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CAA 90 bp CTTGATGTTTGGCAATGGAGTCTCAGTCTACACGAGGGAGCTGTTTACACGGTCGGACCCTGTATAGCCTaGATTCCTACACACACATAT +
Preference number: 5 (lower is better)
Translates to: LDVWQWSLSLHEGAVYTVGPCIA*IPTHTY
Trigger: ATATGTGTGTGTAGGAATCAAGGCTATACAGGGTCC...GACCGTGTAAACAGCTCCCTCGTGTAGACTGAGACTCCATTGCCAAACATCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CAA 90 bp ATTAGGTCAACACCCCTTGGATTTCTCAAGCATGTCAGCACTGTTGGAGTGGACTGGTTCCCAGTGAACTaGGTGCTCTTTTTGATGATC +
Preference number: 5 (lower is better)
Translates to: IRSTPLGFLKHVSTVGVDWFPVN*VLFLMI
Trigger: GATCATCAAAAAGAGCACCAAGTTCACTGGGAACCA...GTCCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CAA 90 bp ATTAGGTCAACACCCCTTGGATTTCTCAAGCATGTCAGCACTGTTGGAGTGGACAATGAGAAGTGGTCATaGTCATCATGCTTTGCTCCC +
Preference number: 5 (lower is better)
Translates to: IRSTPLGFLKHVSTVGVDNEKWS*SSCFAP
Trigger: GGGAGCAAAGCATGATGACAATGACCACTTCTCATT...GTCCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CAA 90 bp CTTGATGTTTGGCAATGGAGTCTCAGTCTACACGAGGGAGCTGTTTACACGGTCATAGACTTGTGTTTGTaGTGTGACATAGCGTGCACA +
Preference number: 5 (lower is better)
Translates to: LDVWQWSLSLHEGAVYTVIDLCL*CDIACT
Trigger: TGTGCACGCTATGTCACACAACAAACACAAGTCTAT...GACCGTGTAAACAGCTCCCTCGTGTAGACTGAGACTCCATTGCCAAACATCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS GCA 90 bp TTTTTGAGACAGTTTACCCAGAATGCAGTGCTCAAAGGAAACGCGTaGGCAGTGTGGTCAGGTTGTTTCGCCGCCATGAAAAATTATTTG +
Preference number: 5 (lower is better)
Translates to: FLRQFTQNAVLKGNA*AVWSGCFAAMKNYL
Trigger: CAAATAATTTTTCATGGCGGCGAAACAACCTGACCACACTGCGCACGCGTTTCCTTTGAGCACTGCATTCTGGGTAAACTGTCTCAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556230.2
CDS-3UTR CAA 90 bp GGAACTGTGAGTCCAATAAACCTATTTTTCTTCCCAGTCTTAGGTATGTCTTTACCTGGGAGGTGGAAGTaGCAGAGAGCTGAGCTTGCA +
Preference number: 5 (lower is better)
Translates to: GTVSPINLFFFPVLGMSLPGRWK*QRAELA
Trigger: TGCAAGCTCAGCTCTCTGCAACTTCCACCTCCCAGG...TAAAGACATACCTAAGACTGGGAAGAAAAATAGGTTTATTGGACTCACAGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CAA 90 bp GATTTGTCTGTGCTGCCAGGAATGTTTATCACTCCATCAACTCGTCCTTTAATATACATAGCTGGTGCTTaGAGTCAGCCTGACACCCAG +
Preference number: 5 (lower is better)
Translates to: DLSVLPGMFITPSTRPLIYIAGA*SQPDTQ
Trigger: CTGGGTGTCAGGCTGACTCAAAGCACCAGCTATGTA...TATTAAAGGACGAGTTGATGGAGTGATAAACATTCCTGGCAGCACAGACAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CAA 90 bp GAAGATGATCAGATGGTATATGTCCAAAGTGAAGGCAAGGTTGGTCATTTAGGCAGACAGAAGAATCACTaGAACCTGGGAGGTGGAAGT +
Preference number: 5 (lower is better)
Translates to: EDDQMVYVQSEGKVGHLGRQKNH*NLGGGS
Trigger: ACTTCCACCTCCCAGGTTCAAGTGATTCTTCTGTCT...GCCTAAATGACCAACCTTGCCTTCACTTTGGACATATACCATCTGATCATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CAA 90 bp GATTTGTCTGTGCTGCCAGGAATGTTTATCACTCCATCAACTCGTCCTTTAATATATGGTCCTAGCTACTaGGAGTCTGAGGTAGGAGGA +
Preference number: 5 (lower is better)
Translates to: DLSVLPGMFITPSTRPLIYGPSY*ESEVGG
Trigger: TCCTCCTACCTCAGACTCCAAGTAGCTAGGACCATA...TATTAAAGGACGAGTTGATGGAGTGATAAACATTCCTGGCAGCACAGACAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CAA 90 bp TACCAGCGAGAACAACCATGTGATTACATAGCTGGTGCTTTGAGTCAGCCTGACCTGGGTAAAGGCTTATaGATTTTTCTAGCACTTGCT +
Preference number: 5 (lower is better)
Translates to: YQREQPCDYIAGALSQPDLGKGL*IFLALA
Trigger: AGCAAGTGCTAGAAAAATCAATAAGCCTTTACCCAG...GTCAGGCTGACTCAAAGCACCAGCTATGTAATCACATGGTTGTTCTCGCTGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CAA 90 bp ATTAGGTCAACACCCCTTGGATTTCTCAAGCATGTCAGCACTGTTGGAGTGGACTTATGTGTCTCTCCATaGGCTGGTCCTAACTTATAT +
Preference number: 5 (lower is better)
Translates to: IRSTPLGFLKHVSTVGVDLCVSP*AGPNLY
Trigger: ATATAAGTTAGGACCAGCCAATGGAGAGACACATAA...GTCCACTCCAACAGTGCTGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CAA 90 bp GAAGATGATCAGATGGTATATGTCCAAAGTGAAGGCAAGGTTGGTCATTTAGGCGAATTTGACTGGCTTTaGTCTCTGGTTCCTAGGAGG +
Preference number: 5 (lower is better)
Translates to: EDDQMVYVQSEGKVGHLGEFDWL*SLVPRR
Trigger: CCTCCTAGGAACCAGAGACAAAAGCCAGTCAAATTC...GCCTAAATGACCAACCTTGCCTTCACTTTGGACATATACCATCTGATCATCTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CAA 90 bp GGAACTGTGAGTCCAATAAACCTATTTTTCTTCCCAGTCTTAGGTATGTCTTTATGGGGTTTCACTGCATaGGCCAGGCTGGTCTTTAAC +
Preference number: 5 (lower is better)
Translates to: GTVSPINLFFFPVLGMSLWGFTA*ARLVFN
Trigger: GTTAAAGACCAGCCTGGCCAATGCAGTGAAACCCCA...TAAAGACATACCTAAGACTGGGAAGAAAAATAGGTTTATTGGACTCACAGTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CAA 90 bp GATTTGTCTGTGCTGCCAGGAATGTTTATCACTCCATCAACTCGTCCTTTAATATCACCCACGAAGAAATaGGAAGGCCTGAGCAAAGAA +
Preference number: 5 (lower is better)
Translates to: DLSVLPGMFITPSTRPLISPTKK*EGLSKE
Trigger: TTCTTTGCTCAGGCCTTCCAATTTCTTCGTGGGTGA...TATTAAAGGACGAGTTGATGGAGTGATAAACATTCCTGGCAGCACAGACAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CAA 90 bp TTCCAGACCTTAGTAACTCTAGCCATAGTCTCTATCAATGGAAATGCACTCCCTTTAGGTCAACACCCCTaGGATTTCTCAAGCATGTCA +
Preference number: 5 (lower is better)
Translates to: FQTLVTLAIVSINGNALPLGQHP*DFSSMS
Trigger: TGACATGCTTGAGAAATCCAAGGGGTGTTGACCTAA...AGGGAGTGCATTTCCATTGATAGAGACTATGGCTAGAGTTACTAAGGTCTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CAA 90 bp GAAGATGATCAGATGGTATATGTCCAAAGTGAAGGCAAGGTTGGTCATTTAGGCTCAATAGACTTGTGTTaGTTGTGTGACATAGCGTGC +
Preference number: 5 (lower is better)
Translates to: EDDQMVYVQSEGKVGHLGSIDLC*LCDIAC
Trigger: GCACGCTATGTCACACAACAAACACAAGTCTATTGA...GCCTAAATGACCAACCTTGCCTTCACTTTGGACATATACCATCTGATCATCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CAA 90 bp TTCCAGACCTTAGTAACTCTAGCCATAGTCTCTATCAATGGAAATGCACTCCCTTCTAAGAAGTGCCTTTaGCCTTCTACCATAATTGTG +
Preference number: 5 (lower is better)
Translates to: FQTLVTLAIVSINGNALPSKKCL*PSTIIV
Trigger: CACAATTATGGTAGAAGGCAAAAGGCACTTCTTAGA...AGGGAGTGCATTTCCATTGATAGAGACTATGGCTAGAGTTACTAAGGTCTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CAA 90 bp GGAACTGTGAGTCCAATAAACCTATTTTTCTTCCCAGTCTTAGGTATGTCTTTAGTAACCCACATATCTTaGGTTCCCTGGGTAAAGGCT +
Preference number: 5 (lower is better)
Translates to: GTVSPINLFFFPVLGMSLVTHIS*VPWVKA
Trigger: AGCCTTTACCCAGGGAACCAAAGATATGTGGGTTAC...TAAAGACATACCTAAGACTGGGAAGAAAAATAGGTTTATTGGACTCACAGTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CAA 90 bp GGAACTGTGAGTCCAATAAACCTATTTTTCTTCCCAGTCTTAGGTATGTCTTTAAGCATGTCAGCACTGTaGGAGTGGACCATCTTTATC +
Preference number: 5 (lower is better)
Translates to: GTVSPINLFFFPVLGMSLSMSAL*EWTIFI
Trigger: GATAAAGATGGTCCACTCCAACAGTGCTGACATGCT...TAAAGACATACCTAAGACTGGGAAGAAAAATAGGTTTATTGGACTCACAGTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CAA 90 bp GGAACTGTGAGTCCAATAAACCTATTTTTCTTCCCAGTCTTAGGTATGTCTTTATACAAACATGACTCATaGAAACCTGGACCTCTTGGG +
Preference number: 5 (lower is better)
Translates to: GTVSPINLFFFPVLGMSLYKHDS*KPGPLG
Trigger: CCCAAGAGGTCCAGGTTTCAATGAGTCATGTTTGTA...TAAAGACATACCTAAGACTGGGAAGAAAAATAGGTTTATTGGACTCACAGTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CAA 90 bp GGAACTGTGAGTCCAATAAACCTATTTTTCTTCCCAGTCTTAGGTATGTCTTTAACCAACACTCCACCATaGGCAAGTTCAATAGACTTG +
Preference number: 5 (lower is better)
Translates to: GTVSPINLFFFPVLGMSLTNTPP*ASSIDL
Trigger: CAAGTCTATTGAACTTGCCAATGGTGGAGTGTTGGT...TAAAGACATACCTAAGACTGGGAAGAAAAATAGGTTTATTGGACTCACAGTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CAA 90 bp GATTTGTCTGTGCTGCCAGGAATGTTTATCACTCCATCAACTCGTCCTTTAATACCTATCTTTTTGTGGTaGTCTGAATATGTCATCTGT +
Preference number: 5 (lower is better)
Translates to: DLSVLPGMFITPSTRPLIPIFLW*SEYVIC
Trigger: ACAGATGACATATTCAGACAACCACAAAAAGATAGG...TATTAAAGGACGAGTTGATGGAGTGATAAACATTCCTGGCAGCACAGACAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CAA 90 bp GGAACTGTGAGTCCAATAAACCTATTTTTCTTCCCAGTCTTAGGTATGTCTTTACACCCAAATCTCATCTaGAATTGTACTCGCATAATC +
Preference number: 5 (lower is better)
Translates to: GTVSPINLFFFPVLGMSLHPNLI*NCTRII
Trigger: GATTATGCGAGTACAATTCAAGATGAGATTTGGGTG...TAAAGACATACCTAAGACTGGGAAGAAAAATAGGTTTATTGGACTCACAGTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CAA 90 bp GGAACTGTGAGTCCAATAAACCTATTTTTCTTCCCAGTCTTAGGTATGTCTTTATATTTTAGTCTCTTGTaGATTTGTCTGTGCTGCCAG +
Preference number: 5 (lower is better)
Translates to: GTVSPINLFFFPVLGMSLYFSLL*ICLCCQ
Trigger: CTGGCAGCACAGACAAATCAACAAGAGACTAAAATA...TAAAGACATACCTAAGACTGGGAAGAAAAATAGGTTTATTGGACTCACAGTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS-3UTR CAA 90 bp GGAACTGTGAGTCCAATAAACCTATTTTTCTTCCCAGTCTTAGGTATGTCTTTAGTAACAGGGATATCTTaGTTTTTCATGAGCCTCTTG +
Preference number: 5 (lower is better)
Translates to: GTVSPINLFFFPVLGMSLVTGIS*FFMSLL
Trigger: CAAGAGGCTCATGAAAAACAAAGATATCCCTGTTAC...TAAAGACATACCTAAGACTGGGAAGAAAAATAGGTTTATTGGACTCACAGTTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000396020.7
CDS GCA 72 bp AGTCCAACAGGCAGGCAGATCAGTGGGCAGCCCGCGTaGGCGAGGACCCCGATGGCGGCGCCGGGTGGCGGG +
Preference number: 6 (lower is better)
Translates to: SPTGRQISGQPA*ARTPMAAPGGG
Trigger: CCCGCCACCCGGCGCCGCCATCGGGGTCCTCGCGCACGCGGGCTGCCCACTGATCTGCCTGCCTGTTGGACT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539688.1
CDS CCA 72 bp GCCCGCGTGCGCGAGGACCCCGATGGCGGCGCCGGGTaGCGGGAAGGAGGAAGTTTCAAAGCCAGCTTGACG +
Preference number: 6 (lower is better)
Translates to: ARVREDPDGGAG*REGGSFKASLT
Trigger: CGTCAAGCTGGCTTTGAAACTTCCTCCTTCCCGCCACCCGGCGCCGCCATCGGGGTCCTCGCGCACGCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539688.1
CDS CCA 72 bp GACTGCCGGTTTCCCGGGCGCGAGCCCGGATCCAGGTaGTCAGTCCCGGTACGCAACCACGGCGAGAACCCG +
Preference number: 6 (lower is better)
Translates to: DCRFPGREPGSR*SVPVRNHGENP
Trigger: CGGGTTCTCGCCGTGGTTGCGTACCGGGACTGACCACCTGGATCCGGGCTCGCGCCCGGGAAACCGGCAGTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539688.1
CDS CAA 90 bp CCCGCCTTGGGGCTTAGGAACCGGGGCAAGGGCGTCCGAGCCGTGTaGAGCCTCTGTCAGCAGACTTCCAGGAGTCAGCCGCCGGTCCGA +
Preference number: 6 (lower is better)
Translates to: PALGLRNRGKGVRAV*SLCQQTSRSQPPVR
Trigger: TCGGACCGGCGGCTGACTCCTGGAAGTCTGCTGACAGAGGCTCAACACGGCTCGGACGCCCTTGCCCCGGTTCCTAAGCCCCAAGGCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539688.1
CDS CAA 72 bp TGTGAGGTGGAGGTGATCAGCCGGCACTTGCCCGCCTaGGGGCTTAGGAACCGGGGCAAGGGCGTCCGAGCC +
Preference number: 6 (lower is better)
Translates to: CEVEVISRHLPA*GLRNRGKGVRA
Trigger: GGCTCGGACGCCCTTGCCCCGGTTCCTAAGCCCCAAGGCGGGCAAGTGCCGGCTGATCACCTCCACCTCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539688.1
CDS GCA 72 bp CACCAAAACCACCAGCAGCCCGTCCGCGCCGGGAAATaGGCCCTCGCTGGCTTACGGGGCCACTCAGACAGT +
Preference number: 6 (lower is better)
Translates to: HQNHQQPVRAGK*ALAGLRGHSDS
Trigger: ACTGTCTGAGTGGCCCCGTAAGCCAGCGAGGGCGCATTTCCCGGCGCGGACGGGCTGCTGGTGGTTTTGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539688.1
ENST00000556230.2
ENST00000557111.5
CDS CAA 90 bp GGCGAGATGAAGCTACACTGTGAGGTGGAGGTGATCAGCCGGCACTaGCCCGCCTTGGGGCTTAGGAACCGGGGCAAGGGCGTCCGAGCC +
Preference number: 6 (lower is better)
Translates to: GEMKLHCEVEVISRH*PALGLRNRGKGVRA
Trigger: GGCTCGGACGCCCTTGCCCCGGTTCCTAAGCCCCAAGGCGGGCAAGTGCCGGCTGATCACCTCCACCTCACAGTGTAGCTTCATCTCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539688.1
CDS TCA 72 bp GGCTTAGGAACCGGGGCAAGGGCGTCCGAGCCGTGTTaGGCCTCTGTCAGCAGACTTCCAGGAGTCAGCCGC +
Preference number: 6 (lower is better)
Translates to: GLGTGARASEPC*ASVSRLPGVSR
Trigger: GCGGCTGACTCCTGGAAGTCTGCTGACAGAGGCTCAACACGGCTCGGACGCCCTTGCCCCGGTTCCTAAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539688.1
CDS GCA 72 bp GCGGCACCAGCGACTCCCAGTCGGCGTGCTCCCTCGTaGCGCCCGTGGCCTCCTCTACTTGAGATTTTAAGC +
Preference number: 6 (lower is better)
Translates to: AAPATPSRRAPS*RPWPPLLEILS
Trigger: GCTTAAAATCTCAAGTAGAGGAGGCCACGGGCGGCACGAGGGAGCACGCCGACTGGGAGTCGCTGGTGCCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557367.2
CDS CAA 72 bp GGGCTTAGGAACCGGGGCAAGGGCGTCCGAGCCGTGTaGAGCCTCTGTCAGCAGACTTCCAGGAGTCAGCCG +
Preference number: 6 (lower is better)
Translates to: GLRNRGKGVRAV*SLCQQTSRSQP
Trigger: CGGCTGACTCCTGGAAGTCTGCTGACAGAGGCTCAACACGGCTCGGACGCCCTTGCCCCGGTTCCTAAGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539688.1
CDS CAA 90 bp AAGCTACACTGTGAGGTGGAGGTGATCAGCCGGCACTTGCCCGCCTaGGGGCTTAGGAACCGGGGCAAGGGCGTCCGAGCCGTGTTGAGC +
Preference number: 6 (lower is better)
Translates to: KLHCEVEVISRHLPA*GLRNRGKGVRAVLS
Trigger: GCTCAACACGGCTCGGACGCCCTTGCCCCGGTTCCTAAGCCCCAAGGCGGGCAAGTGCCGGCTGATCACCTCCACCTCACAGTGTAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539688.1
CDS CCA 72 bp GCGACTCCCAGTCGGCGTGCTCCCTCGTGCCGCCCGTaGCCTCCTCTACTTGAGATTTTAAGCAGCCTAGCG +
Preference number: 6 (lower is better)
Translates to: ATPSRRAPSCRP*PPLLEILSSLA
Trigger: CGCTAGGCTGCTTAAAATCTCAAGTAGAGGAGGCCACGGGCGGCACGAGGGAGCACGCCGACTGGGAGTCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557367.2
CDS CAA 72 bp AAGCTACACTGTGAGGTGGAGGTGATCAGCCGGCACTaGCCCGCCTTGGGGCTTAGGAACCGGGGCAAGGGC +
Preference number: 6 (lower is better)
Translates to: KLHCEVEVISRH*PALGLRNRGKG
Trigger: GCCCTTGCCCCGGTTCCTAAGCCCCAAGGCGGGCAAGTGCCGGCTGATCACCTCCACCTCACAGTGTAGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539688.1
CDS TCA 72 bp GTGGTTGTGGCCGTTGGGCGAGATGAAGCTACACTGTaGGGTGGAGGTGATCAGCCGGCACTTGCCCGCCTT +
Preference number: 6 (lower is better)
Translates to: VVVAVGRDEATL*GGGDQPALARL
Trigger: AAGGCGGGCAAGTGCCGGCTGATCACCTCCACCTCACAGTGTAGCTTCATCTCGCCCAACGGCCACAACCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539688.1
CDS CAA 90 bp GCCGGGTGGCGGGAAGGAGGAAGTTTCAAAGCCAGCTTGACGTGGTaGTGGCCGTTGGGCGAGATGAAGCTACACTGTGAGGTGGAGGTG +
Preference number: 6 (lower is better)
Translates to: AGWREGGSFKASLTW*WPLGEMKLHCEVEV
Trigger: CACCTCCACCTCACAGTGTAGCTTCATCTCGCCCAACGGCCACAACCACGTCAAGCTGGCTTTGAAACTTCCTCCTTCCCGCCACCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539688.1
CDS CAA 90 bp CGGGAAGGAGGAAGTTTCAAAGCCAGCTTGACGTGGTTGTGGCCGTaGGGCGAGATGAAGCTACACTGTGAGGTGGAGGTGATCAGCCGG +
Preference number: 6 (lower is better)
Translates to: REGGSFKASLTWLWP*GEMKLHCEVEVISR
Trigger: CCGGCTGATCACCTCCACCTCACAGTGTAGCTTCATCTCGCCCAACGGCCACAACCACGTCAAGCTGGCTTTGAAACTTCCTCCTTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539688.1
CDS CAA 72 bp GGAAGTTTCAAAGCCAGCTTGACGTGGTTGTGGCCGTaGGGCGAGATGAAGCTACACTGTGAGGTGGAGGTG +
Preference number: 6 (lower is better)
Translates to: GSFKASLTWLWP*GEMKLHCEVEV
Trigger: CACCTCCACCTCACAGTGTAGCTTCATCTCGCCCAACGGCCACAACCACGTCAAGCTGGCTTTGAAACTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539688.1
CDS CAA 72 bp CGGGAAGGAGGAAGTTTCAAAGCCAGCTTGACGTGGTaGTGGCCGTTGGGCGAGATGAAGCTACACTGTGAG +
Preference number: 6 (lower is better)
Translates to: REGGSFKASLTW*WPLGEMKLHCE
Trigger: CTCACAGTGTAGCTTCATCTCGCCCAACGGCCACAACCACGTCAAGCTGGCTTTGAAACTTCCTCCTTCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539688.1
CDS CCA 72 bp GAAGGAGGAAGTTTCAAAGCCAGCTTGACGTGGTTGTaGCCGTTGGGCGAGATGAAGCTACACTGTGAGGTG +
Preference number: 6 (lower is better)
Translates to: EGGSFKASLTWL*PLGEMKLHCEV
Trigger: CACCTCACAGTGTAGCTTCATCTCGCCCAACGGCCACAACCACGTCAAGCTGGCTTTGAAACTTCCTCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539688.1
CDS GCA 72 bp CAGTTTACCCAGAATGCAGTGCTCAAAGGAAACGCGTaGGCAGTGTGGTCAGGTTGTTTCGCCGCCATGAAA +
Preference number: 6 (lower is better)
Translates to: QFTQNAVLKGNA*AVWSGCFAAMK
Trigger: TTTCATGGCGGCGAAACAACCTGACCACACTGCGCACGCGTTTCCTTTGAGCACTGCATTCTGGGTAAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556230.2
CDS CAA 90 bp CCCGTCCTAGTTCAATCAATCAAGAAAATCAAGAGTACGAAGGCCTaGTGCGGTCTGGACGGTCTTTCCACGTCTCAGGTGCAGTTAAGC +
Preference number: 6 (lower is better)
Translates to: PVLVQSIKKIKSTKA*CGLDGLSTSQVQLS
Trigger: GCTTAACTGCACCTGAGACGTGGAAAGACCGTCCAGACCGCACAAGGCCTTCGTACTCTTGATTTTCTTGATTGATTGAACTAGGACGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539688.1
CDS CAA 90 bp GAGGTAAAAGGAAGAAGCTGGCCCACGCATGCGCTCTTCAAATTTTaGAGACAGTTTACCCAGAATGCAGTGCTCAAAGGAAACGCGTGC +
Preference number: 6 (lower is better)
Translates to: EVKGRSWPTHALFKF*RQFTQNAVLKGNAC
Trigger: GCACGCGTTTCCTTTGAGCACTGCATTCTGGGTAAACTGTCTCAAAAATTTGAAGAGCGCATGCGTGGGCCAGCTTCTTCCTTTTACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556230.2
CDS CCA 72 bp CAGAATGCAGTGCTCAAAGGAAACGCGTGCGCAGTGTaGTCAGGTTGTTTCGCCGCCATGAAAAATTATTTG +
Preference number: 6 (lower is better)
Translates to: QNAVLKGNACAV*SGCFAAMKNYL
Trigger: CAAATAATTTTTCATGGCGGCGAAACAACCTGACCACACTGCGCACGCGTTTCCTTTGAGCACTGCATTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556230.2
CDS CCA 72 bp AAAATAACCCCCACAACCTTCTCTGCCCAAACAACATaGAGTACGCCTGCAGACGCCTACCTTAATGAAACC +
Preference number: 6 (lower is better)
Translates to: KITPTTFSAQTT*STPADAYLNET
Trigger: GGTTTCATTAAGGTAGGCGTCTGCAGGCGTACTCCATGTTGTTTGGGCAGAGAAGGTTGTGGGGGTTATTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554075.2
CDS CAA 72 bp GTTCAATCAATCAAGAAAATCAAGAGTACGAAGGCCTaGTGCGGTCTGGACGGTCTTTCCACGTCTCAGGTG +
Preference number: 6 (lower is better)
Translates to: VQSIKKIKSTKA*CGLDGLSTSQV
Trigger: CACCTGAGACGTGGAAAGACCGTCCAGACCGCACAAGGCCTTCGTACTCTTGATTTTCTTGATTGATTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539688.1
CDS CAA 72 bp GGAAGAAGCTGGCCCACGCATGCGCTCTTCAAATTTTaGAGACAGTTTACCCAGAATGCAGTGCTCAAAGGA +
Preference number: 6 (lower is better)
Translates to: GRSWPTHALFKF*RQFTQNAVLKG
Trigger: TCCTTTGAGCACTGCATTCTGGGTAAACTGTCTCAAAAATTTGAAGAGCGCATGCGTGGGCCAGCTTCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556230.2
CDS CAA 90 bp TTAAGCCAGTCACACTCCATCCACCTACCCGCCATGAAAAATTATTaGTTCAGCAGGAATTGCCAAGTCAAATACAGCCATATAAAGCCC +
Preference number: 6 (lower is better)
Translates to: LSQSHSIHLPAMKNY*FSRNCQVKYSHIKP
Trigger: GGGCTTTATATGGCTGTATTTGACTTGGCAATTCCTGCTGAACAAATAATTTTTCATGGCGGGTAGGTGGATGGAGTGTGACTGGCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539688.1
CDS CAA 72 bp TCACACTCCATCCACCTACCCGCCATGAAAAATTATTaGTTCAGCAGGAATTGCCAAGTCAAATACAGCCAT +
Preference number: 6 (lower is better)
Translates to: SHSIHLPAMKNY*FSRNCQVKYSH
Trigger: ATGGCTGTATTTGACTTGGCAATTCCTGCTGAACAAATAATTTTTCATGGCGGGTAGGTGGATGGAGTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539688.1
CDS CAA 72 bp GTGTGGTCAGGTTGTTTCGCCGCCATGAAAAATTATTaGTTCAGCAGGAATTGCCAAGTCAAATACAGCCAT +
Preference number: 6 (lower is better)
Translates to: VWSGCFAAMKNY*FSRNCQVKYSH
Trigger: ATGGCTGTATTTGACTTGGCAATTCCTGCTGAACAAATAATTTTTCATGGCGGCGAAACAACCTGACCACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556230.2