Pregenerated sensors for RPS27L (Homo sapiens)
Ensembl gene IDs: ENSG00000185088Ensembl transcript IDs: ENST00000330964.10, ENST00000411926.1, ENST00000455271.5, ENST00000462430.5, ENST00000482846.1
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTGTCATCCCACTGTCTCTCCTTATAGCCAAGTATCCTAAACTGTaGAAGCTGAAGTGCCTTGGAGTACCTCAGGAAAAACACTTGACA | + |
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Preference number: 1 (lower is better) Translates to: AVIPLSLLIAKYPKL*KLKCLGVPQEKHLT Trigger: TGTCAAGTGTTTTTCCTGAGGTACTCCAAGGCACTTCAGCTTGCACAGTTTAGGATACTTGGCTATAAGGAGAGACAGTGGGATGACAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR GCA 90 bp | CTGTCTCTCCTTATAGCCAAGTATCCTAAACTGTGCAAGCTGAAGTaGCTTGGAGTACCTCAGGAAAAACACTTGACACTGACGCATCTT | + |
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Preference number: 1 (lower is better) Translates to: LSLLIAKYPKLCKLK*LGVPQEKHLTLTHL Trigger: AAGATGCGTCAGTGTCAAGTGTTTTTCCTGAGGTACTCCAAGGCACTTCAGCTTGCACAGTTTAGGATACTTGGCTATAAGGAGAGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR TCA 90 bp | AATATGATATGGCACTACATTCCCTTTGATGGCATCCTATCCTTGTaGAGCTGGGTTTGGAGCCACTGCTATGACAAAAAGCACCATGCA | + |
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Preference number: 1 (lower is better) Translates to: NMIWHYIPFDGILSL*SWVWSHCYDKKHHA Trigger: TGCATGGTGCTTTTTGTCATAGCAGTGGCTCCAAACCCAGCTTCACAAGGATAGGATGCCATCAAAGGGAATGTAGTGCCATATCATATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR GCA 90 bp | CCACTGCGCCCAGCCTTCCTTATACAACTATATACACCCCAAACTTaGCATCATTCTTTAGTTCTTGTGCAACAGTTCTCTGATTTAAGC | + |
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Preference number: 1 (lower is better) Translates to: PLRPAFLIQLYTPQT*HHSLVLVQQFSDLS Trigger: GCTTAAATCAGAGAACTGTTGCACAAGAACTAAAGAATGATGGCAAGTTTGGGGTGTATATAGTTGTATAAGGAAGGCTGGGCGCAGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR TCA 90 bp | ACCCCAAACTTGCCATCATTCTTTAGTTCTTGTGCAACAGTTCTCTaGTTTAAGCAGTATGTAAGAGGATCAGTTGCTCACATTAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: TPNLPSFFSSCATVL*FKQYVRGSVAHIRG Trigger: GCCTCTAATGTGAGCAACTGATCCTCTTACATACTGCTTAAATCAGAGAACTGTTGCACAAGAACTAAAGAATGATGGCAAGTTTGGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR-3UTR TCA 90 bp | CATAGACACAAAACACTGAGCAGGGCTGAAGCTGAGGGTCTGCCGGGCTCTGGTGGTGGGCGGATGGCCTaGGGCAAGGAGTTCAAGACC | + |
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Preference number: 2 (lower is better) Translates to: HRHKTLSRAEAEGLPGSGGGRMA*GKEFKT Trigger: GGTCTTGAACTCCTTGCCTCAGGCCATCCGCCCACC...ACCAGAGCCCGGCAGACCCTCAGCTTCAGCCCTGCTCAGTGTTTTGTGTCTATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR-3UTR CCA 90 bp | CAGGATGGTCTCAATCTCGACCTCGTGATCCGCCGCCTGGGCCTCCCAAAGTGTGAGTTCCTTACAGCCTaGGCAACACAGCCAGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: QDGLNLDLVIRRLGLPKCEFLTA*ATQPEP Trigger: GGGCTCTGGCTGTGTTGCCCAGGCTGTAAGGAACTC...ACACTTTGGGAGGCCCAGGCGGCGGATCACGAGGTCGAGATTGAGACCATCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR-3UTR CCA 90 bp | CAGGATGGTCTCAATCTCGACCTCGTGATCCGCCGCCTGGGCCTCCCAAAGTGTAGGGTCACTCAAGCCTaGGAGGTGGAGGAGGTTGCA | + |
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Preference number: 2 (lower is better) Translates to: QDGLNLDLVIRRLGLPKCRVTQA*EVEEVA Trigger: TGCAACCTCCTCCACCTCCCAGGCTTGAGTGACCCT...ACACTTTGGGAGGCCCAGGCGGCGGATCACGAGGTCGAGATTGAGACCATCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR-3UTR TCA 90 bp | CAGGATGGTCTCAATCTCGACCTCGTGATCCGCCGCCTGGGCCTCCCAAAGTGTGCACTCCAGCTTGAGTaGCAGAGCAGGACTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: QDGLNLDLVIRRLGLPKCALQLE*QSRTLS Trigger: AGAGAGAGTCCTGCTCTGTCACTCAAGCTGGAGTGC...ACACTTTGGGAGGCCCAGGCGGCGGATCACGAGGTCGAGATTGAGACCATCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR-3UTR TCA 90 bp | CAGGATGGTCTCAATCTCGACCTCGTGATCCGCCGCCTGGGCCTCCCAAAGTGTGAGCTTGCGGTGAACTaGGATTGCGCCACTGCACTT | + |
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Preference number: 2 (lower is better) Translates to: QDGLNLDLVIRRLGLPKCELAVN*DCATAL Trigger: AAGTGCAGTGGCGCAATCTCAGTTCACCGCAAGCTC...ACACTTTGGGAGGCCCAGGCGGCGGATCACGAGGTCGAGATTGAGACCATCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR-3UTR CCA 90 bp | CAGGATGGTCTCAATCTCGACCTCGTGATCCGCCGCCTGGGCCTCCCAAAGTGTGGCAAGAGAATTGCTTaGACCTGGGAGGCGGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: QDGLNLDLVIRRLGLPKCGKRIA*TWEAEV Trigger: AACCTCCGCCTCCCAGGTCCAAGCAATTCTCTTGCC...ACACTTTGGGAGGCCCAGGCGGCGGATCACGAGGTCGAGATTGAGACCATCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR-3UTR TCA 90 bp | CATAGACACAAAACACTGAGCAGGGCTGAAGCTGAGGGTCTGCCGGGCTCTGGTTGGAGGAGGTTGCAGTaGGCTGAGATCACGCCACTG | + |
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Preference number: 2 (lower is better) Translates to: HRHKTLSRAEAEGLPGSGWRRLQ*AEITPL Trigger: CAGTGGCGTGATCTCAGCTCACTGCAACCTCCTCCA...ACCAGAGCCCGGCAGACCCTCAGCTTCAGCCCTGCTCAGTGTTTTGTGTCTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR-3UTR TCA 90 bp | CAGGATGGTCTCAATCTCGACCTCGTGATCCGCCGCCTGGGCCTCCCAAAGTGTAAAATTACGAAGACATaGGAGGCCGAGGCAGGCGGA | + |
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Preference number: 2 (lower is better) Translates to: QDGLNLDLVIRRLGLPKCKITKT*EAEAGG Trigger: TCCGCCTGCCTCGGCCTCTCATGTCTTCGTAATTTT...ACACTTTGGGAGGCCCAGGCGGCGGATCACGAGGTCGAGATTGAGACCATCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR-3UTR GCA 90 bp | CAGGATGGTCTCAATCTCGACCTCGTGATCCGCCGCCTGGGCCTCCCAAAGTGTATCTGTAGTCAGGAGTaGTCACCTATCTGGGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: QDGLNLDLVIRRLGLPKCICSQE*SPIWAR Trigger: TCTGGCCCAGATAGGTGAGCACTCCTGACTACAGAT...ACACTTTGGGAGGCCCAGGCGGCGGATCACGAGGTCGAGATTGAGACCATCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR-3UTR GCA 90 bp | CAGGATGGTCTCAATCTCGACCTCGTGATCCGCCGCCTGGGCCTCCCAAAGTGTCTGTGCAAGCTGAAGTaGCTTGGAGTACCTCAGGAA | + |
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Preference number: 2 (lower is better) Translates to: QDGLNLDLVIRRLGLPKCLCKLK*LGVPQE Trigger: TTCCTGAGGTACTCCAAGGCACTTCAGCTTGCACAG...ACACTTTGGGAGGCCCAGGCGGCGGATCACGAGGTCGAGATTGAGACCATCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR-3UTR GCA 90 bp | CATAGACACAAAACACTGAGCAGGGCTGAAGCTGAGGGTCTGCCGGGCTCTGGTTTGCCCAGGCTAGAGTaGAATGGCACGATCTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: HRHKTLSRAEAEGLPGSGLPRLE*NGTILA Trigger: AGCCAAGATCGTGCCATTGCACTCTAGCCTGGGCAA...ACCAGAGCCCGGCAGACCCTCAGCTTCAGCCCTGCTCAGTGTTTTGTGTCTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR-3UTR GCA 90 bp | CATAGACACAAAACACTGAGCAGGGCTGAAGCTGAGGGTCTGCCGGGCTCTGGTTCACCCAGGCTGAAGTaGAGTGGTGCGATTTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: HRHKTLSRAEAEGLPGSGSPRLK*SGAILA Trigger: AGCCAAAATCGCACCACTGCACTTCAGCCTGGGTGA...ACCAGAGCCCGGCAGACCCTCAGCTTCAGCCCTGCTCAGTGTTTTGTGTCTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR-3UTR GCA 90 bp | CAGGATGGTCTCAATCTCGACCTCGTGATCCGCCGCCTGGGCCTCCCAAAGTGTTCTGCGGGTAAATCATaGCACTTCAGATTTCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: QDGLNLDLVIRRLGLPKCSAGKS*HFRFLL Trigger: GAGGAGAAATCTGAAGTGGCATGATTTACCCGCAGA...ACACTTTGGGAGGCCCAGGCGGCGGATCACGAGGTCGAGATTGAGACCATCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR-3UTR GCA 90 bp | CATAGACACAAAACACTGAGCAGGGCTGAAGCTGAGGGTCTGCCGGGCTCTGGTTTCAAGCAATTCTTGTaGCTCAGCCTCCCAAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: HRHKTLSRAEAEGLPGSGFKQFL*LSLPSS Trigger: GCTACTTGGGAGGCTGAGGCACAAGAATTGCTTGAA...ACCAGAGCCCGGCAGACCCTCAGCTTCAGCCCTGCTCAGTGTTTTGTGTCTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR-3UTR TCA 90 bp | CATAGACACAAAACACTGAGCAGGGCTGAAGCTGAGGGTCTGCCGGGCTCTGGTGATGTGTTCTTTCTTTaGGACACAGCTTCACGCTGT | + |
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Preference number: 2 (lower is better) Translates to: HRHKTLSRAEAEGLPGSGDVFFL*DTASRC Trigger: ACAGCGTGAAGCTGTGTCTCAAAGAAAGAACACATC...ACCAGAGCCCGGCAGACCCTCAGCTTCAGCCCTGCTCAGTGTTTTGTGTCTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR-3UTR CCA 90 bp | CATAGACACAAAACACTGAGCAGGGCTGAAGCTGAGGGTCTGCCGGGCTCTGGTATAATCCCAGCTACTTaGGAGGACAAGGCAAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: HRHKTLSRAEAEGLPGSGIIPAT*EDKARE Trigger: TTCTCTTGCCTTGTCCTCCCAAGTAGCTGGGATTAT...ACCAGAGCCCGGCAGACCCTCAGCTTCAGCCCTGCTCAGTGTTTTGTGTCTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR-3UTR CCA 90 bp | CATAGACACAAAACACTGAGCAGGGCTGAAGCTGAGGGTCTGCCGGGCTCTGGTAAGCAGAGTAGAAACTaGACTATCTTCCTAGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: HRHKTLSRAEAEGLPGSGKQSRN*TIFLVQ Trigger: TTGGACTAGGAAGATAGTCCAGTTTCTACTCTGCTT...ACCAGAGCCCGGCAGACCCTCAGCTTCAGCCCTGCTCAGTGTTTTGTGTCTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR-3UTR TCA 90 bp | TCAATTTTGAGAAACTGTATGGAGCCCAAAAGGCACACACATTCCATTAGTAACCCAAGGCAGATCACCTaGGGCCAGGAGTTCCTTACA | + |
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Preference number: 2 (lower is better) Translates to: SILRNCMEPKRHTHSISNPRQIT*GQEFLT Trigger: TGTAAGGAACTCCTGGCCTCAGGTGATCTGCCTTGG...GTTACTAATGGAATGTGTGTGCCTTTTGGGCTCCATACAGTTTCTCAAAATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR CAA 90 bp | AAACTGTGCAAGCTGAAGTGCCTTGGAGTACCTCAGGAAAAACACTaGACACTGACGCATCTTTTGTATAAACTACTAGTTCCAGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: KLCKLKCLGVPQEKH*TLTHLLYKLLVPGS Trigger: ACTTCCTGGAACTAGTAGTTTATACAAAAGATGCGTCAGTGTCAAGTGTTTTTCCTGAGGTACTCCAAGGCACTTCAGCTTGCACAGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR CAA 90 bp | CCAAGGGAATTTTCAGGGTTTGTTAGATTAGTCCTCATCATAGGTTaGATTCCTTCTCATCAAAAGCTGTCATCCCACTGTCTCTCCTTA | + |
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Preference number: 2 (lower is better) Translates to: PREFSGFVRLVLIIG*IPSHQKLSSHCLSL Trigger: TAAGGAGAGACAGTGGGATGACAGCTTTTGATGAGAAGGAATCAAACCTATGATGAGGACTAATCTAACAAACCCTGAAAATTCCCTTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR CAA 90 bp | TCCCCAGAACCTACGAATATGTTACCTTACATAGCAAAATGGATTTaGCAGATGTCATTAAGAATACTTTATTTGGCCGGATGCAGTGGC | + |
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Preference number: 2 (lower is better) Translates to: SPEPTNMLPYIAKWI*QMSLRILYLAGCSG Trigger: GCCACTGCATCCGGCCAAATAAAGTATTCTTAATGACATCTGCAAAATCCATTTTGCTATGTAAGGTAACATATTCGTAGGTTCTGGGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR-3UTR TCA 90 bp | TCAATTTTGAGAAACTGTATGGAGCCCAAAAGGCACACACATTCCATTAGTAACTGTGCAACAGTTCTCTaGTTTAAGCAGTATGTAAGA | + |
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Preference number: 2 (lower is better) Translates to: SILRNCMEPKRHTHSISNCATVL*FKQYVR Trigger: TCTTACATACTGCTTAAATCAGAGAACTGTTGCACA...GTTACTAATGGAATGTGTGTGCCTTTTGGGCTCCATACAGTTTCTCAAAATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR-3UTR CAA 90 bp | CAGGATGGTCTCAATCTCGACCTCGTGATCCGCCGCCTGGGCCTCCCAAAGTGTAGGCAAGAGAATTGCTaGGACCTGGGAGGCGGAGGT | + |
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Preference number: 3 (lower is better) Translates to: QDGLNLDLVIRRLGLPKCRQENC*DLGGGG Trigger: ACCTCCGCCTCCCAGGTCCAAGCAATTCTCTTGCCT...ACACTTTGGGAGGCCCAGGCGGCGGATCACGAGGTCGAGATTGAGACCATCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR TCA 72 bp | ATCATGTTGGCCAGGATGGTCTCAATCTCGACCTCGTaGTCCGCCGCCTGGGCCTCCCAAAGTGTTGGGATT | + |
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Preference number: 3 (lower is better) Translates to: IMLARMVSISTS*SAAWASQSVGI Trigger: AATCCCAACACTTTGGGAGGCCCAGGCGGCGGATCACGAGGTCGAGATTGAGACCATCCTGGCCAACATGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR CCA 72 bp | TTTAGCAGAGACGCGGTTTCATCATGTTGGCCAGGATaGTCTCAATCTCGACCTCGTGATCCGCCGCCTGGG | + |
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Preference number: 3 (lower is better) Translates to: FSRDAVSSCWPG*SQSRPRDPPPG Trigger: CCCAGGCGGCGGATCACGAGGTCGAGATTGAGACCATCCTGGCCAACATGATGAAACCGCGTCTCTGCTAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR-3UTR CAA 90 bp | CAGGATGGTCTCAATCTCGACCTCGTGATCCGCCGCCTGGGCCTCCCAAAGTGTTATAATCCCAGCTACTaGGGAGGACAAGGCAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: QDGLNLDLVIRRLGLPKCYNPSY*GGQGKR Trigger: TCTCTTGCCTTGTCCTCCCAAGTAGCTGGGATTATA...ACACTTTGGGAGGCCCAGGCGGCGGATCACGAGGTCGAGATTGAGACCATCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR-3UTR CAA 90 bp | CAGGATGGTCTCAATCTCGACCTCGTGATCCGCCGCCTGGGCCTCCCAAAGTGTCAGACACAAAACCATTaGTCATCTCATCAGGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: QDGLNLDLVIRRLGLPKCQTQNH*SSHQAR Trigger: TCTGGCCTGATGAGATGACAAATGGTTTTGTGTCTG...ACACTTTGGGAGGCCCAGGCGGCGGATCACGAGGTCGAGATTGAGACCATCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR-3UTR CAA 90 bp | CAGGATGGTCTCAATCTCGACCTCGTGATCCGCCGCCTGGGCCTCCCAAAGTGTTTAGAGGCCTACCTGTaGATAGGAAATGCCTGTTTT | + |
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Preference number: 3 (lower is better) Translates to: QDGLNLDLVIRRLGLPKCLEAYL*IGNACF Trigger: AAAACAGGCATTTCCTATCAACAGGTAGGCCTCTAA...ACACTTTGGGAGGCCCAGGCGGCGGATCACGAGGTCGAGATTGAGACCATCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR-3UTR CAA 90 bp | CAGGATGGTCTCAATCTCGACCTCGTGATCCGCCGCCTGGGCCTCCCAAAGTGTAATCTGATTTCAATTTaGAGAAACTGTATGGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: QDGLNLDLVIRRLGLPKCNLISI*RNCMEP Trigger: GGGCTCCATACAGTTTCTCAAAATTGAAATCAGATT...ACACTTTGGGAGGCCCAGGCGGCGGATCACGAGGTCGAGATTGAGACCATCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR-3UTR CAA 90 bp | TCAATTTTGAGAAACTGTATGGAGCCCAAAAGGCACACACATTCCATTAGTAACGACAAGGCAAGAGAATaGCTTGGACCTGGGAGGCGG | + |
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Preference number: 3 (lower is better) Translates to: SILRNCMEPKRHTHSISNDKARE*LGPGRR Trigger: CCGCCTCCCAGGTCCAAGCAATTCTCTTGCCTTGTC...GTTACTAATGGAATGTGTGTGCCTTTTGGGCTCCATACAGTTTCTCAAAATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR GCA 72 bp | CCACTGTCTCTCCTTATAGCCAAGTATCCTAAACTGTaGAAGCTGAAGTGCCTTGGAGTACCTCAGGAAAAA | + |
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Preference number: 3 (lower is better) Translates to: PLSLLIAKYPKL*KLKCLGVPQEK Trigger: TTTTTCCTGAGGTACTCCAAGGCACTTCAGCTTGCACAGTTTAGGATACTTGGCTATAAGGAGAGACAGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR TCA 72 bp | CCTATCCTTGTGAAGCTGGGTTTGGAGCCACTGCTATaGCAAAAAGCACCATGCAAAAATCAATGTGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: PILVKLGLEPLL*QKAPCKNQCGR Trigger: TCTTCCACATTGATTTTTGCATGGTGCTTTTTGTCATAGCAGTGGCTCCAAACCCAGCTTCACAAGGATAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR GCA 72 bp | CTACTATCCCCAACCAGGACTTCTGCGGGTAAATCATaGCACTTCAGATTTCTCCTCAAATTTTCTACCCTA | + |
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Preference number: 3 (lower is better) Translates to: LLSPTRTSAGKS*HFRFLLKFSTL Trigger: TAGGGTAGAAAATTTGAGGAGAAATCTGAAGTGGCATGATTTACCCGCAGAAGTCCTGGTTGGGGATAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR GCA 72 bp | CTTATAGCCAAGTATCCTAAACTGTGCAAGCTGAAGTaGCTTGGAGTACCTCAGGAAAAACACTTGACACTG | + |
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Preference number: 3 (lower is better) Translates to: LIAKYPKLCKLK*LGVPQEKHLTL Trigger: CAGTGTCAAGTGTTTTTCCTGAGGTACTCCAAGGCACTTCAGCTTGCACAGTTTAGGATACTTGGCTATAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR CCA 72 bp | CAGTATATAATAATGTATGTGGCTGACCCTGAAGTTTaGGAAAGTCCTGGTGTCCTATTCAGCACTTTTCAA | + |
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Preference number: 3 (lower is better) Translates to: QYIIMYVADPEV*ESPGVLFSTFQ Trigger: TTGAAAAGTGCTGAATAGGACACCAGGACTTTCCCAAACTTCAGGGTCAGCCACATACATTATTATATACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| 3UTR TCA 72 bp | TTGCCATCATTCTTTAGTTCTTGTGCAACAGTTCTCTaGTTTAAGCAGTATGTAAGAGGATCAGTTGCTCAC | + |
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Preference number: 3 (lower is better) Translates to: LPSFFSSCATVL*FKQYVRGSVAH Trigger: GTGAGCAACTGATCCTCTTACATACTGCTTAAATCAGAGAACTGTTGCACAAGAACTAAAGAATGATGGCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| CDS-3UTR GCA 90 bp | CAGGATGGTCTCAATCTCGACCTCGTGATCCGCCGCCTGGGCCTCCCAAAGTGTTCGCCCAGGCTGGAGTaGAGTGGTACGATCTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: QDGLNLDLVIRRLGLPKCSPRLE*SGTIWA Trigger: AGCCCAGATCGTACCACTGCACTCCAGCCTGGGCGA...ACACTTTGGGAGGCCCAGGCGGCGGATCACGAGGTCGAGATTGAGACCATCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| CDS-3UTR GCA 90 bp | CAGGATGGTCTCAATCTCGACCTCGTGATCCGCCGCCTGGGCCTCCCAAAGTGTTCACCCAGGCTGGAGTaGAGAGGCGTGATCTTGGCT | + |
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Preference number: 4 (lower is better) Translates to: QDGLNLDLVIRRLGLPKCSPRLE*RGVILA Trigger: AGCCAAGATCACGCCTCTGCACTCCAGCCTGGGTGA...ACACTTTGGGAGGCCCAGGCGGCGGATCACGAGGTCGAGATTGAGACCATCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| CDS-3UTR GCA 90 bp | CAGGATGGTCTCAATCTCGACCTCGTGATCCGCCGCCTGGGCCTCCCAAAGTGTCCAGGAGGAGGAGCTTaGGGTGAACTGAGATTGCGC | + |
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Preference number: 4 (lower is better) Translates to: QDGLNLDLVIRRLGLPKCPGGGA*GELRLR Trigger: GCGCAATCTCAGTTCACCGCAAGCTCCTCCTCCTGG...ACACTTTGGGAGGCCCAGGCGGCGGATCACGAGGTCGAGATTGAGACCATCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| CDS-3UTR TCA 90 bp | CATAGACACAAAACACTGAGCAGGGCTGAAGCTGAGGGTCTGCCGGGCTCTGGTGAGCTTGCGGTGAACTaGGATTGCGCCACTGCACTT | + |
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Preference number: 4 (lower is better) Translates to: HRHKTLSRAEAEGLPGSGELAVN*DCATAL Trigger: AAGTGCAGTGGCGCAATCTCAGTTCACCGCAAGCTC...ACCAGAGCCCGGCAGACCCTCAGCTTCAGCCCTGCTCAGTGTTTTGTGTCTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| CDS-3UTR GCA 90 bp | CAGGATGGTCTCAATCTCGACCTCGTGATCCGCCGCCTGGGCCTCCCAAAGTGTTTCAAGCAATTCTTGTaGCTCAGCCTCCCAAGTAGC | + |
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Preference number: 4 (lower is better) Translates to: QDGLNLDLVIRRLGLPKCFKQFL*LSLPSS Trigger: GCTACTTGGGAGGCTGAGGCACAAGAATTGCTTGAA...ACACTTTGGGAGGCCCAGGCGGCGGATCACGAGGTCGAGATTGAGACCATCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| CDS-3UTR TCA 90 bp | CATAGACACAAAACACTGAGCAGGGCTGAAGCTGAGGGTCTGCCGGGCTCTGGTCTAAACTGTGCAAGCTaGAGTGCCTTGGAGTACCTC | + |
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Preference number: 4 (lower is better) Translates to: HRHKTLSRAEAEGLPGSGLNCAS*SALEYL Trigger: GAGGTACTCCAAGGCACTTCAGCTTGCACAGTTTAG...ACCAGAGCCCGGCAGACCCTCAGCTTCAGCCCTGCTCAGTGTTTTGTGTCTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| CDS-3UTR TCA 90 bp | CAGGATGGTCTCAATCTCGACCTCGTGATCCGCCGCCTGGGCCTCCCAAAGTGTGGGAAGAATAGGGAGTaGATGCTGATAGGTATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QDGLNLDLVIRRLGLPKCGKNRE*MLIGMK Trigger: CTTCATACCTATCAGCATTCACTCCCTATTCTTCCC...ACACTTTGGGAGGCCCAGGCGGCGGATCACGAGGTCGAGATTGAGACCATCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR GCA 90 bp | CCTATAATCCCAGCTACTTGGGAGGACAAGGCAAGAGAATTGCTTGGACCTGGGGTGATCTTGGCTCACTaGAAGCTCCGCCTCCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PIIPATWEDKARELLGPGVILAH*KLRLPG Trigger: ACCTGGGAGGCGGAGCTTGCAGTGAGCCAAGATCAC...CCCAGGTCCAAGCAATTCTCTTGCCTTGTCCTCCCAAGTAGCTGGGATTATAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR GCA 90 bp | AGGAGTTGTATAGTGAGTGGATACACTCCCCGTCTCAGCTCCCCAGGATTACTTCTGAGATTGCGCCACTaGACTTCAGCCTGGGCGACG | + |
|
Preference number: 4 (lower is better) Translates to: RSCIVSGYTPRLSSPGLLLRLRH*TSAWAT Trigger: CGTCGCCCAGGCTGAAGTGCAGTGGCGCAATCTCAG...AAGTAATCCTGGGGAGCTGAGACGGGGAGTGTATCCACTCACTATACAACTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR CCA 90 bp | AGGAGTTGTATAGTGAGTGGATACACTCCCCGTCTCAGCTCCCCAGGATTACTTATTAGGCGGGCGTGGTaGCACGTGCCTGAAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSCIVSGYTPRLSSPGLLIRRAW*HVPEVS Trigger: GGAGACTTCAGGCACGTGCCACCACGCCCGCCTAAT...AAGTAATCCTGGGGAGCTGAGACGGGGAGTGTATCCACTCACTATACAACTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR TCA 90 bp | CCTATAATCCCAGCTACTTGGGAGGACAAGGCAAGAGAATTGCTTGGACCTGGGCCAAGGCAGATCACCTaGGGCCAGGAGTTCCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: PIIPATWEDKARELLGPGPRQIT*GQEFLT Trigger: TGTAAGGAACTCCTGGCCTCAGGTGATCTGCCTTGG...CCCAGGTCCAAGCAATTCTCTTGCCTTGTCCTCCCAAGTAGCTGGGATTATAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR TCA 90 bp | CCTATAATCCCAGCTACTTGGGAGGACAAGGCAAGAGAATTGCTTGGACCTGGGGGCATCCTATCCTTGTaGAGCTGGGTTTGGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PIIPATWEDKARELLGPGGILSL*SWVWSH Trigger: GTGGCTCCAAACCCAGCTTCACAAGGATAGGATGCC...CCCAGGTCCAAGCAATTCTCTTGCCTTGTCCTCCCAAGTAGCTGGGATTATAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR TCA 90 bp | AGGAGTTGTATAGTGAGTGGATACACTCCCCGTCTCAGCTCCCCAGGATTACTTACCGCGCCCGGCCCCTaGTGTCATTTTCTATGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: RSCIVSGYTPRLSSPGLLTAPGP*CHFLCL Trigger: TAGGCATAGAAAATGACATCAGGGGCCGGGCGCGGT...AAGTAATCCTGGGGAGCTGAGACGGGGAGTGTATCCACTCACTATACAACTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR GCA 90 bp | CAGGATGGTCTCAATCTCGACCTCGTGATCCGCCGCCTGGGCCTCCCAAAGTGTAAGTATCCTAAACTGTaGAAGCTGAAGTGCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QDGLNLDLVIRRLGLPKCKYPKL*KLKCLG Trigger: TCCAAGGCACTTCAGCTTGCACAGTTTAGGATACTT...ACACTTTGGGAGGCCCAGGCGGCGGATCACGAGGTCGAGATTGAGACCATCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR CCA 90 bp | CCTATAATCCCAGCTACTTGGGAGGACAAGGCAAGAGAATTGCTTGGACCTGGGGGCAAGAGAATTGCTTaGACCTGGGAGGCGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PIIPATWEDKARELLGPGGKRIA*TWEAEV Trigger: AACCTCCGCCTCCCAGGTCCAAGCAATTCTCTTGCC...CCCAGGTCCAAGCAATTCTCTTGCCTTGTCCTCCCAAGTAGCTGGGATTATAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR CCA 90 bp | CAGGATGGTCTCAATCTCGACCTCGTGATCCGCCGCCTGGGCCTCCCAAAGTGTAGTTTGGGAAAGTCCTaGTGTCCTATTCAGCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: QDGLNLDLVIRRLGLPKCSLGKS*CPIQHF Trigger: AAAGTGCTGAATAGGACACCAGGACTTTCCCAAACT...ACACTTTGGGAGGCCCAGGCGGCGGATCACGAGGTCGAGATTGAGACCATCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR CCA 90 bp | AGGAGTTGTATAGTGAGTGGATACACTCCCCGTCTCAGCTCCCCAGGATTACTTAGGGTCACTCAAGCCTaGGAGGTGGAGGAGGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RSCIVSGYTPRLSSPGLLRVTQA*EVEEVA Trigger: TGCAACCTCCTCCACCTCCCAGGCTTGAGTGACCCT...AAGTAATCCTGGGGAGCTGAGACGGGGAGTGTATCCACTCACTATACAACTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR CCA 90 bp | CCTATAATCCCAGCTACTTGGGAGGACAAGGCAAGAGAATTGCTTGGACCTGGGATTAGCGGGGTGTGGTaGCACGTGCCTGTAGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PIIPATWEDKARELLGPGISGVW*HVPVVP Trigger: TGGAACTACAGGCACGTGCCACCACACCCCGCTAAT...CCCAGGTCCAAGCAATTCTCTTGCCTTGTCCTCCCAAGTAGCTGGGATTATAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR TCA 90 bp | CAGGATGGTCTCAATCTCGACCTCGTGATCCGCCGCCTGGGCCTCCCAAAGTGTTTGCTTTCTTCTAAATaGACACCCTTCTGTGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QDGLNLDLVIRRLGLPKCLLSSK*TPFCES Trigger: AGACTCACAGAAGGGTGTTCATTTAGAAGAAAGCAA...ACACTTTGGGAGGCCCAGGCGGCGGATCACGAGGTCGAGATTGAGACCATCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR TCA 90 bp | AGGAGTTGTATAGTGAGTGGATACACTCCCCGTCTCAGCTCCCCAGGATTACTTGCACTCCAGCTTGAGTaGCAGAGCAGGACTCTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSCIVSGYTPRLSSPGLLALQLE*QSRTLS Trigger: AGAGAGAGTCCTGCTCTGTCACTCAAGCTGGAGTGC...AAGTAATCCTGGGGAGCTGAGACGGGGAGTGTATCCACTCACTATACAACTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR GCA 90 bp | CCTATAATCCCAGCTACTTGGGAGGACAAGGCAAGAGAATTGCTTGGACCTGGGTCACCCAGGCTGAAGTaGAGTGGTGCGATTTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PIIPATWEDKARELLGPGSPRLK*SGAILA Trigger: AGCCAAAATCGCACCACTGCACTTCAGCCTGGGTGA...CCCAGGTCCAAGCAATTCTCTTGCCTTGTCCTCCCAAGTAGCTGGGATTATAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR CCA 90 bp | AGGAGTTGTATAGTGAGTGGATACACTCCCCGTCTCAGCTCCCCAGGATTACTTGCAATGGCACGATCTTaGCTCACCACAACCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RSCIVSGYTPRLSSPGLLAMARS*LTTTST Trigger: GGTGGAGGTTGTGGTGAGCCAAGATCGTGCCATTGC...AAGTAATCCTGGGGAGCTGAGACGGGGAGTGTATCCACTCACTATACAACTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR CCA 90 bp | CATAGACACAAAACACTGAGCAGGGCTGAAGCTGAGGGTCTGCCGGGCTCTGGTTGGTTCAAAAGGCTGTaGCAGCTCCAATTTCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HRHKTLSRAEAEGLPGSGWFKRL*QLQFLF Trigger: GAACAGAAATTGGAGCTGCCACAGCCTTTTGAACCA...ACCAGAGCCCGGCAGACCCTCAGCTTCAGCCCTGCTCAGTGTTTTGTGTCTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR TCA 90 bp | CAGGATGGTCTCAATCTCGACCTCGTGATCCGCCGCCTGGGCCTCCCAAAGTGTTGTGCAACAGTTCTCTaGTTTAAGCAGTATGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QDGLNLDLVIRRLGLPKCCATVL*FKQYVR Trigger: TCTTACATACTGCTTAAATCAGAGAACTGTTGCACA...ACACTTTGGGAGGCCCAGGCGGCGGATCACGAGGTCGAGATTGAGACCATCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR TCA 90 bp | AGGAGTTGTATAGTGAGTGGATACACTCCCCGTCTCAGCTCCCCAGGATTACTTGGTCACAATGAGCTATaGCCCTCCAACCTGGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: RSCIVSGYTPRLSSPGLLGHNEL*PSNLGN Trigger: ATTGCCCAGGTTGGAGGGTCATAGCTCATTGTGACC...AAGTAATCCTGGGGAGCTGAGACGGGGAGTGTATCCACTCACTATACAACTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR TCA 90 bp | CAGGATGGTCTCAATCTCGACCTCGTGATCCGCCGCCTGGGCCTCCCAAAGTGTAGTTCAGTTTCAATATaGTATGGCACTACATTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: QDGLNLDLVIRRLGLPKCSSVSI*YGTTFP Trigger: AGGGAATGTAGTGCCATATCATATTGAAACTGAACT...ACACTTTGGGAGGCCCAGGCGGCGGATCACGAGGTCGAGATTGAGACCATCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR CCA 90 bp | CCTATAATCCCAGCTACTTGGGAGGACAAGGCAAGAGAATTGCTTGGACCTGGGGCTGACCCTGAAGTTTaGGAAAGTCCTGGTGTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: PIIPATWEDKARELLGPGADPEV*ESPGVL Trigger: TAGGACACCAGGACTTTCCCAAACTTCAGGGTCAGC...CCCAGGTCCAAGCAATTCTCTTGCCTTGTCCTCCCAAGTAGCTGGGATTATAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR CCA 90 bp | CCTATAATCCCAGCTACTTGGGAGGACAAGGCAAGAGAATTGCTTGGACCTGGGAAAATTAGCGGGGTGTaGTGGCACGTGCCTGTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PIIPATWEDKARELLGPGKISGV*WHVPVV Trigger: AACTACAGGCACGTGCCACCACACCCCGCTAATTTT...CCCAGGTCCAAGCAATTCTCTTGCCTTGTCCTCCCAAGTAGCTGGGATTATAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR CCA 90 bp | CCTATAATCCCAGCTACTTGGGAGGACAAGGCAAGAGAATTGCTTGGACCTGGGTCATGTTGGCCAGGATaGTCTCAATCTCGACCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PIIPATWEDKARELLGPGSCWPG*SQSRPR Trigger: ACGAGGTCGAGATTGAGACCATCCTGGCCAACATGA...CCCAGGTCCAAGCAATTCTCTTGCCTTGTCCTCCCAAGTAGCTGGGATTATAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR TCA 90 bp | AGTTCTGGGGTACACGTGCAGGACGTGCAAAATATGTACTTCTTTAAGATGTTTGGTGGGCGGATGGCCTaGGGCAAGGAGTTCAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: SSGVHVQDVQNMYFFKMFGGRMA*GKEFKT Trigger: GGTCTTGAACTCCTTGCCTCAGGCCATCCGCCCACC...AAACATCTTAAAGAAGTACATATTTTGCACGTCCTGCACGTGTACCCCAGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR TCA 90 bp | AGGAGTTGTATAGTGAGTGGATACACTCCCCGTCTCAGCTCCCCAGGATTACTTATAGACACAAAACACTaGGCAGGGCTGAAGCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RSCIVSGYTPRLSSPGLLIDTKH*AGLKLR Trigger: CCTCAGCTTCAGCCCTGCTCAGTGTTTTGTGTCTAT...AAGTAATCCTGGGGAGCTGAGACGGGGAGTGTATCCACTCACTATACAACTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR GCA 90 bp | AGGAGTTGTATAGTGAGTGGATACACTCCCCGTCTCAGCTCCCCAGGATTACTTATCTGTAGTCAGGAGTaGTCACCTATCTGGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSCIVSGYTPRLSSPGLLICSQE*SPIWAR Trigger: TCTGGCCCAGATAGGTGAGCACTCCTGACTACAGAT...AAGTAATCCTGGGGAGCTGAGACGGGGAGTGTATCCACTCACTATACAACTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR CCA 90 bp | CCTATAATCCCAGCTACTTGGGAGGACAAGGCAAGAGAATTGCTTGGACCTGGGGCGGTTTCATCATGTTaGCCAGGATGGTCTCAATCT | + |
|
Preference number: 4 (lower is better) Translates to: PIIPATWEDKARELLGPGAVSSC*PGWSQS Trigger: AGATTGAGACCATCCTGGCCAACATGATGAAACCGC...CCCAGGTCCAAGCAATTCTCTTGCCTTGTCCTCCCAAGTAGCTGGGATTATAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR TCA 90 bp | AGGAGTTGTATAGTGAGTGGATACACTCCCCGTCTCAGCTCCCCAGGATTACTTAGTTTGAGGTCACAATaGGCTATGACCCTCCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: RSCIVSGYTPRLSSPGLLSLRSQ*AMTLQP Trigger: AGGTTGGAGGGTCATAGCTCATTGTGACCTCAAACT...AAGTAATCCTGGGGAGCTGAGACGGGGAGTGTATCCACTCACTATACAACTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR GCA 90 bp | CATAGACACAAAACACTGAGCAGGGCTGAAGCTGAGGGTCTGCCGGGCTCTGGTTACACGTGCAGGACGTaGAAAATATGTACTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: HRHKTLSRAEAEGLPGSGYTCRT*KICTSL Trigger: TAAAGAAGTACATATTTTGCACGTCCTGCACGTGTA...ACCAGAGCCCGGCAGACCCTCAGCTTCAGCCCTGCTCAGTGTTTTGTGTCTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR CCA 90 bp | AGTTCTGGGGTACACGTGCAGGACGTGCAAAATATGTACTTCTTTAAGATGTTTGCTGAGGTGGGCGGATaGCCTGAGGCAAGGAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSGVHVQDVQNMYFFKMFAEVGG*PEARSS Trigger: TGAACTCCTTGCCTCAGGCCATCCGCCCACCTCAGC...AAACATCTTAAAGAAGTACATATTTTGCACGTCCTGCACGTGTACCCCAGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR GCA 90 bp | CATAGACACAAAACACTGAGCAGGGCTGAAGCTGAGGGTCTGCCGGGCTCTGGTTCATCACATCACTTTTaGTCTTGTGTGTGTATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HRHKTLSRAEAEGLPGSGSSHHF*SCVCIV Trigger: AACTATACACACACAAGAGCAAAAGTGATGTGATGA...ACCAGAGCCCGGCAGACCCTCAGCTTCAGCCCTGCTCAGTGTTTTGTGTCTATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR CCA 90 bp | AGGAGTTGTATAGTGAGTGGATACACTCCCCGTCTCAGCTCCCCAGGATTACTTATAATCCCAGCTACTTaGGAGGACAAGGCAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RSCIVSGYTPRLSSPGLLIIPAT*EDKARE Trigger: TTCTCTTGCCTTGTCCTCCCAAGTAGCTGGGATTAT...AAGTAATCCTGGGGAGCTGAGACGGGGAGTGTATCCACTCACTATACAACTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR CCA 90 bp | TCAATTTTGAGAAACTGTATGGAGCCCAAAAGGCACACACATTCCATTAGTAACGGGTCTGCCGGGCTCTaGTTCAAAAGGCTGTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SILRNCMEPKRHTHSISNGSAGL*FKRLWQ Trigger: CTGCCACAGCCTTTTGAACCAGAGCCCGGCAGACCC...GTTACTAATGGAATGTGTGTGCCTTTTGGGCTCCATACAGTTTCTCAAAATTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR TCA 90 bp | TCAATTTTGAGAAACTGTATGGAGCCCAAAAGGCACACACATTCCATTAGTAACACTCCTGACTGCAAGTaGTCTGCCTGCCTCAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SILRNCMEPKRHTHSISNTPDCK*SACLSL Trigger: GAGGCTGAGGCAGGCAGATCACTTGCAGTCAGGAGT...GTTACTAATGGAATGTGTGTGCCTTTTGGGCTCCATACAGTTTCTCAAAATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR TCA 90 bp | TCAATTTTGAGAAACTGTATGGAGCCCAAAAGGCACACACATTCCATTAGTAACTGGAGGAGGTTGCAGTaGGCTGAGATCACGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SILRNCMEPKRHTHSISNWRRLQ*AEITPL Trigger: CAGTGGCGTGATCTCAGCTCACTGCAACCTCCTCCA...GTTACTAATGGAATGTGTGTGCCTTTTGGGCTCCATACAGTTTCTCAAAATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR CCA 90 bp | TCAATTTTGAGAAACTGTATGGAGCCCAAAAGGCACACACATTCCATTAGTAACGAGTTCCTTACAGCCTaGGCAACACAGCCAGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SILRNCMEPKRHTHSISNEFLTA*ATQPEP Trigger: GGGCTCTGGCTGTGTTGCCCAGGCTGTAAGGAACTC...GTTACTAATGGAATGTGTGTGCCTTTTGGGCTCCATACAGTTTCTCAAAATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR TCA 90 bp | TCAATTTTGAGAAACTGTATGGAGCCCAAAAGGCACACACATTCCATTAGTAACGCCTCCCGAGTTAGCTaGGATTACAGGCATGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SILRNCMEPKRHTHSISNASRVS*DYRHAP Trigger: TGGTGCATGCCTGTAATCTCAGCTAACTCGGGAGGC...GTTACTAATGGAATGTGTGTGCCTTTTGGGCTCCATACAGTTTCTCAAAATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR GCA 90 bp | TCAATTTTGAGAAACTGTATGGAGCCCAAAAGGCACACACATTCCATTAGTAACCTGAAGCTGAGGGTCTaGCGGGCTCTGGTTCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SILRNCMEPKRHTHSISNLKLRV*RALVQK Trigger: CTTTTGAACCAGAGCCCGGCAGACCCTCAGCTTCAG...GTTACTAATGGAATGTGTGTGCCTTTTGGGCTCCATACAGTTTCTCAAAATTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR TCA 90 bp | TCAATTTTGAGAAACTGTATGGAGCCCAAAAGGCACACACATTCCATTAGTAACAAAATTACGAAGACATaGGAGGCCGAGGCAGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SILRNCMEPKRHTHSISNKITKT*EAEAGG Trigger: TCCGCCTGCCTCGGCCTCTCATGTCTTCGTAATTTT...GTTACTAATGGAATGTGTGTGCCTTTTGGGCTCCATACAGTTTCTCAAAATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR CCA 90 bp | AGTTCTGGGGTACACGTGCAGGACGTGCAAAATATGTACTTCTTTAAGATGTTTCTTAGTGGCTGCCAATaGCTGAGAGGAGGGAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSGVHVQDVQNMYFFKMFLSGCQ*LRGGKN Trigger: ATTCTTCCCTCCTCTCAGCCATTGGCAGCCACTAAG...AAACATCTTAAAGAAGTACATATTTTGCACGTCCTGCACGTGTACCCCAGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR CCA 90 bp | AGTTCTGGGGTACACGTGCAGGACGTGCAAAATATGTACTTCTTTAAGATGTTTGAGTTGTATAGTGAGTaGATACACTCCCCGTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSGVHVQDVQNMYFFKMFELYSE*IHSPSQ Trigger: CTGAGACGGGGAGTGTATCCACTCACTATACAACTC...AAACATCTTAAAGAAGTACATATTTTGCACGTCCTGCACGTGTACCCCAGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| 3UTR CAA 72 bp | CAGATGACTTACAGGAACGACCAGACACAAAACCATTaGTCATCTCATCAGGCCAGAAGCCAAGAATTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QMTYRNDQTQNH*SSHQARSQEFH Trigger: ATGAAATTCTTGGCTTCTGGCCTGATGAGATGACAAATGGTTTTGTGTCTGGTCGTTCCTGTAAGTCATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR TCA 90 bp | TCAATTTTGAGAAACTGTATGGAGCCCAAAAGGCACACACATTCCATTAGTAACGCACTACATTCCCTTTaGTGGCATCCTATCCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SILRNCMEPKRHTHSISNALHSL*WHPILV Trigger: CACAAGGATAGGATGCCATCAAAGGGAATGTAGTGC...GTTACTAATGGAATGTGTGTGCCTTTTGGGCTCCATACAGTTTCTCAAAATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR GCA 90 bp | AGTTCTGGGGTACACGTGCAGGACGTGCAAAATATGTACTTCTTTAAGATGTTTTGGGTTTGGAGCCACTaGTATGACAAAAAGCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSGVHVQDVQNMYFFKMFWVWSH*YDKKHH Trigger: ATGGTGCTTTTTGTCATAGCAGTGGCTCCAAACCCA...AAACATCTTAAAGAAGTACATATTTTGCACGTCCTGCACGTGTACCCCAGAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| 3UTR CAA 72 bp | CCCAGCCTTCCTTATACAACTATATACACCCCAAACTaGCCATCATTCTTTAGTTCTTGTGCAACAGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSLPYTTIYTPN*PSFFSSCATVL Trigger: GAGAACTGTTGCACAAGAACTAAAGAATGATGGCAAGTTTGGGGTGTATATAGTTGTATAAGGAAGGCTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR GCA 90 bp | TCAATTTTGAGAAACTGTATGGAGCCCAAAAGGCACACACATTCCATTAGTAACTCTGCGGGTAAATCATaGCACTTCAGATTTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SILRNCMEPKRHTHSISNSAGKS*HFRFLL Trigger: GAGGAGAAATCTGAAGTGGCATGATTTACCCGCAGA...GTTACTAATGGAATGTGTGTGCCTTTTGGGCTCCATACAGTTTCTCAAAATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| 3UTR CAA 72 bp | AAGCTGAAGTGCCTTGGAGTACCTCAGGAAAAACACTaGACACTGACGCATCTTTTGTATAAACTACTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KLKCLGVPQEKH*TLTHLLYKLLV Trigger: AACTAGTAGTTTATACAAAAGATGCGTCAGTGTCAAGTGTTTTTCCTGAGGTACTCCAAGGCACTTCAGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| CDS-3UTR TCA 90 bp | AGTTCTGGGGTACACGTGCAGGACGTGCAAAATATGTACTTCTTTAAGATGTTTTTCTGGCATCTCCTTTaGAACAAAATTCAAAGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SSGVHVQDVQNMYFFKMFFWHLL*NKIQRL Trigger: TAGCCTTTGAATTTTGTTTCAAAGGAGATGCCAGAA...AAACATCTTAAAGAAGTACATATTTTGCACGTCCTGCACGTGTACCCCAGAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR CCA 90 bp | TCAATTTTGAGAAACTGTATGGAGCCCAAAAGGCACACACATTCCATTAGTAACAAGCAGAGTAGAAACTaGACTATCTTCCTAGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SILRNCMEPKRHTHSISNKQSRN*TIFLVQ Trigger: TTGGACTAGGAAGATAGTCCAGTTTCTACTCTGCTT...GTTACTAATGGAATGTGTGTGCCTTTTGGGCTCCATACAGTTTCTCAAAATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| 3UTR CAA 72 bp | GTACCTCAGGAAAAACACTTGACACTGACGCATCTTTaGTATAAACTACTAGTTCCAGGAAGTTCAGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VPQEKHLTLTHL*YKLLVPGSSVS Trigger: TGAAACTGAACTTCCTGGAACTAGTAGTTTATACAAAAGATGCGTCAGTGTCAAGTGTTTTTCCTGAGGTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| 3UTR CAA 72 bp | TTTTCAGGGTTTGTTAGATTAGTCCTCATCATAGGTTaGATTCCTTCTCATCAAAAGCTGTCATCCCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: FSGFVRLVLIIG*IPSHQKLSSHC Trigger: ACAGTGGGATGACAGCTTTTGATGAGAAGGAATCAAACCTATGATGAGGACTAATCTAACAAACCCTGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR GCA 90 bp | AGTTCTGGGGTACACGTGCAGGACGTGCAAAATATGTACTTCTTTAAGATGTTTTATACACCCCAAACTTaGCATCATTCTTTAGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSGVHVQDVQNMYFFKMFYTPQT*HHSLVL Trigger: AAGAACTAAAGAATGATGGCAAGTTTGGGGTGTATA...AAACATCTTAAAGAAGTACATATTTTGCACGTCCTGCACGTGTACCCCAGAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR CCA 90 bp | AGTTCTGGGGTACACGTGCAGGACGTGCAAAATATGTACTTCTTTAAGATGTTTGATCTTGTAGCAACCTaGACATTTTACATCCATAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSGVHVQDVQNMYFFKMFDLVAT*TFYIHK Trigger: TTTATGGATGTAAAATGTCCAGGTTGCTACAAGATC...AAACATCTTAAAGAAGTACATATTTTGCACGTCCTGCACGTGTACCCCAGAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| CDS GCA 90 bp | CCCTGCAGGGCCAGCCGCGCCGCGGTGACCGGGCAAGTCACTACATaGCCGCCACGCGCGAAGACGCTGCGCAACCTGAGCCGCCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: PCRASRAAVTGQVTT*PPRAKTLRNLSRLA Trigger: GGCGAGGCGGCTCAGGTTGCGCAGCGTCTTCGCGCGTGGCGGGCATGTAGTGACTTGCCCGGTCACCGCGGCGCGGCTGGCCCTGCAGGG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482846.1 |
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| CDS GCA 90 bp | CTGTTCCCCTCCCAGCCACCGCCTCTGAATTGCAGCCCACGCCCCTaGAGGGCCAGCCGCGCCGCGGTGACCGGGCAAGTCACTACATGC | + |
|
Preference number: 5 (lower is better) Translates to: LFPSQPPPLNCSPRP*RASRAAVTGQVTTC Trigger: GCATGTAGTGACTTGCCCGGTCACCGCGGCGCGGCTGGCCCTGCAGGGGCGTGGGCTGCAATTCAGAGGCGGTGGCTGGGAGGGGAACAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000455271.5 ENST00000482846.1 |
||
| CDS TCA 90 bp | CGGACACTACAGGCCCGAGAGGCAGCCGGACTCATCCGTCCCATATaGCTCTCGGTAAAGAAGCCCAAAACAAACCCGGAGCCCGATGTA | + |
|
Preference number: 5 (lower is better) Translates to: RTLQAREAAGLIRPI*LSVKKPKTNPEPDV Trigger: TACATCGGGCTCCGGGTTTGTTTTGGGCTTCTTTACCGAGAGTCATATGGGACGGATGAGTCCGGCTGCCTCTCGGGCCTGTAGTGTCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482846.1 |
||
| CDS-3UTR CAA 90 bp | CATAGACACAAAACACTGAGCAGGGCTGAAGCTGAGGGTCTGCCGGGCTCTGGTGGCATGTTGATCCTCTaGCAAGCTCAGCCCTACCAG | + |
|
Preference number: 5 (lower is better) Translates to: HRHKTLSRAEAEGLPGSGGMLIL*QAQPYQ Trigger: CTGGTAGGGCTGAGCTTGCAAGAGGATCAACATGCC...ACCAGAGCCCGGCAGACCCTCAGCTTCAGCCCTGCTCAGTGTTTTGTGTCTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS TCA 90 bp | CCCAAAACAAACCCGGAGCCCGATGTAAACAACTCACAGGCATGTTaGTCCTCTTGCAAGCTCAGCCCTACCAGACCTCCCAGCCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: PKTNPEPDVNNSQAC*SSCKLSPTRPPSPH Trigger: GTGTGGGCTGGGAGGTCTGGTAGGGCTGAGCTTGCAAGAGGATCAACATGCCTGTGAGTTGTTTACATCGGGCTCCGGGTTTGTTTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482846.1 |
||
| CDS-3UTR CAA 90 bp | CATAGACACAAAACACTGAGCAGGGCTGAAGCTGAGGGTCTGCCGGGCTCTGGTCGCGGTTTCATCATGTaGGCCAGGATGGTCTCAATC | + |
|
Preference number: 5 (lower is better) Translates to: HRHKTLSRAEAEGLPGSGRGFIM*ARMVSI Trigger: GATTGAGACCATCCTGGCCAACATGATGAAACCGCG...ACCAGAGCCCGGCAGACCCTCAGCTTCAGCCCTGCTCAGTGTTTTGTGTCTATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR CAA 90 bp | CATAGACACAAAACACTGAGCAGGGCTGAAGCTGAGGGTCTGCCGGGCTCTGGTCTAGCCAAAGGCATGTaGATCCTCTTGCAAGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: HRHKTLSRAEAEGLPGSGLAKGM*ILLQAQ Trigger: CTGAGCTTGCAAGAGGATCAACATGCCTTTGGCTAG...ACCAGAGCCCGGCAGACCCTCAGCTTCAGCCCTGCTCAGTGTTTTGTGTCTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR CAA 90 bp | CAGGATGGTCTCAATCTCGACCTCGTGATCCGCCGCCTGGGCCTCCCAAAGTGTAGATGTGTTCTTTCTTaGAGACACAGCTTCACGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QDGLNLDLVIRRLGLPKCRCVLS*RHSFTL Trigger: CAGCGTGAAGCTGTGTCTCAAAGAAAGAACACATCT...ACACTTTGGGAGGCCCAGGCGGCGGATCACGAGGTCGAGATTGAGACCATCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR CAA 90 bp | CATAGACACAAAACACTGAGCAGGGCTGAAGCTGAGGGTCTGCCGGGCTCTGGTGGCACTACATTCCCTTaGATGGCATCCTATCCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: HRHKTLSRAEAEGLPGSGGTTFP*MASYPC Trigger: ACAAGGATAGGATGCCATCAAAGGGAATGTAGTGCC...ACCAGAGCCCGGCAGACCCTCAGCTTCAGCCCTGCTCAGTGTTTTGTGTCTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR CAA 90 bp | CCTATAATCCCAGCTACTTGGGAGGACAAGGCAAGAGAATTGCTTGGACCTGGGTATAATCCCAGCTACTaGGGAGGACAAGGCAAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PIIPATWEDKARELLGPGYNPSY*GGQGKR Trigger: TCTCTTGCCTTGTCCTCCCAAGTAGCTGGGATTATA...CCCAGGTCCAAGCAATTCTCTTGCCTTGTCCTCCCAAGTAGCTGGGATTATAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR CAA 90 bp | CATAGACACAAAACACTGAGCAGGGCTGAAGCTGAGGGTCTGCCGGGCTCTGGTGTCCTCATCATAGGTTaGATTCCTTCTCATCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: HRHKTLSRAEAEGLPGSGVLIIG*IPSHQK Trigger: CTTTTGATGAGAAGGAATCAAACCTATGATGAGGAC...ACCAGAGCCCGGCAGACCCTCAGCTTCAGCCCTGCTCAGTGTTTTGTGTCTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR CAA 90 bp | CATAGACACAAAACACTGAGCAGGGCTGAAGCTGAGGGTCTGCCGGGCTCTGGTATCAGCAGAGAAAATTaGCAATTCTGGCATCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HRHKTLSRAEAEGLPGSGISREN*QFWHLL Trigger: AAGGAGATGCCAGAATTGCAAATTTTCTCTGCTGAT...ACCAGAGCCCGGCAGACCCTCAGCTTCAGCCCTGCTCAGTGTTTTGTGTCTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS-3UTR CAA 90 bp | AGTTCTGGGGTACACGTGCAGGACGTGCAAAATATGTACTTCTTTAAGATGTTTAGGCAAGAGAATTGCTaGGACCTGGGAGGCGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSGVHVQDVQNMYFFKMFRQENC*DLGGGG Trigger: ACCTCCGCCTCCCAGGTCCAAGCAATTCTCTTGCCT...AAACATCTTAAAGAAGTACATATTTTGCACGTCCTGCACGTGTACCCCAGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| CDS-3UTR CAA 90 bp | AGGAGTTGTATAGTGAGTGGATACACTCCCCGTCTCAGCTCCCCAGGATTACTTCAGACACAAAACCATTaGTCATCTCATCAGGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RSCIVSGYTPRLSSPGLLQTQNH*SSHQAR Trigger: TCTGGCCTGATGAGATGACAAATGGTTTTGTGTCTG...AAGTAATCCTGGGGAGCTGAGACGGGGAGTGTATCCACTCACTATACAACTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| CDS TCA 90 bp | CACCAGGTCACACCAAATAGATCTCAGATTTGCTGCCAATCCACTTaGACTCTTCCAGTGAGAGCATGGAACTTACAGCTCCCCAAAATA | + |
|
Preference number: 5 (lower is better) Translates to: HQVTPNRSQICCQST*TLPVRAWNLQLPKI Trigger: TATTTTGGGGAGCTGTAAGTTCCATGCTCTCACTGGAAGAGTTCAAGTGGATTGGCAGCAAATCTGAGATCTATTTGGTGTGACCTGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482846.1 |
||
| CDS-3UTR CAA 90 bp | AGGAGTTGTATAGTGAGTGGATACACTCCCCGTCTCAGCTCCCCAGGATTACTTTTGAAAGGTGAAGTTTaGCTAGGTGTGAAAGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RSCIVSGYTPRLSSPGLLLKGEV*LGVKVR Trigger: TCTCACTTTCACACCTAGCAAAACTTCACCTTTCAA...AAGTAATCCTGGGGAGCTGAGACGGGGAGTGTATCCACTCACTATACAACTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000330964.10 |
||
| CDS TCA 90 bp | AAACTTTGTCCTTCTTTACTCAACTGCGTAATGAACTGTCTTCGATaGAAACTGCGCGAAGTCGAGGTGCTAAGCAAAGAAAGTGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: KLCPSLLNCVMNCLR*KLREVEVLSKESDP Trigger: GGGGTCACTTTCTTTGCTTAGCACCTCGACTTCGCGCAGTTTTCATCGAAGACAGTTCATTACGCAGTTGAGTAAAGAAGGACAAAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482846.1 |
||
| CDS TCA 90 bp | CAAATAGATCTCAGATTTGCTGCCAATCCACTTGAACTCTTCCAGTaGGAGCATGGAACTTACAGCTCCCCAAAATATCACAAGCAAATT | + |
|
Preference number: 5 (lower is better) Translates to: QIDLRFAANPLELFQ*EHGTYSSPKYHKQI Trigger: AATTTGCTTGTGATATTTTGGGGAGCTGTAAGTTCCATGCTCTCACTGGAAGAGTTCAAGTGGATTGGCAGCAAATCTGAGATCTATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482846.1 |
||
| CDS-3UTR CAA 90 bp | AGTTCTGGGGTACACGTGCAGGACGTGCAAAATATGTACTTCTTTAAGATGTTTAATCTGATTTCAATTTaGAGAAACTGTATGGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SSGVHVQDVQNMYFFKMFNLISI*RNCMEP Trigger: GGGCTCCATACAGTTTCTCAAAATTGAAATCAGATT...AAACATCTTAAAGAAGTACATATTTTGCACGTCCTGCACGTGTACCCCAGAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000330964.10 |
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| CDS TCA 90 bp | TTACTATTAGTTTTAAACCACAACGCTGGCACATTTAACCATACGTaGAATATACATGCAAAAACAGGAATAACGGTCATCCTCGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LLLVLNHNAGTFNHT*NIHAKTGITVILGR Trigger: TCTGCCGAGGATGACCGTTATTCCTGTTTTTGCATGTATATTTCACGTATGGTTAAATGTGCCAGCGTTGTGGTTTAAAACTAATAGTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000462430.5 ENST00000482846.1 |
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| CDS GCA 72 bp | TCCCAGCCACCGCCTCTGAATTGCAGCCCACGCCCCTaGAGGGCCAGCCGCGCCGCGGTGACCGGGCAAGTC | + |
|
Preference number: 6 (lower is better) Translates to: SQPPPLNCSPRP*RASRAAVTGQV Trigger: GACTTGCCCGGTCACCGCGGCGCGGCTGGCCCTGCAGGGGCGTGGGCTGCAATTCAGAGGCGGTGGCTGGGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000455271.5 ENST00000482846.1 |
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| CDS GCA 72 bp | GCCAGCCGCGCCGCGGTGACCGGGCAAGTCACTACATaGCCGCCACGCGCGAAGACGCTGCGCAACCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: ASRAAVTGQVTT*PPRAKTLRNLS Trigger: GCTCAGGTTGCGCAGCGTCTTCGCGCGTGGCGGGCATGTAGTGACTTGCCCGGTCACCGCGGCGCGGCTGGC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482846.1 |
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| CDS TCA 72 bp | CTACATGCCCGCCACGCGCGAAGACGCTGCGCAACCTaGGCCGCCTCGCCACTCTCGGACACTACAGGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: LHARHARRRCAT*AASPLSDTTGP Trigger: CGGGCCTGTAGTGTCCGAGAGTGGCGAGGCGGCTCAGGTTGCGCAGCGTCTTCGCGCGTGGCGGGCATGTAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482846.1 |
||
| CDS TCA 72 bp | CAGGCCCGAGAGGCAGCCGGACTCATCCGTCCCATATaGCTCTCGGTAAAGAAGCCCAAAACAAACCCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: QAREAAGLIRPI*LSVKKPKTNPE Trigger: CTCCGGGTTTGTTTTGGGCTTCTTTACCGAGAGTCATATGGGACGGATGAGTCCGGCTGCCTCTCGGGCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482846.1 |
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| CDS CAA 90 bp | GCCCAAAACAAACCCGGAGCCCGATGTAAACAACTCACAGGCATGTaGATCCTCTTGCAAGCTCAGCCCTACCAGACCTCCCAGCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: AQNKPGARCKQLTGM*ILLQAQPYQTSQPT Trigger: TGTGGGCTGGGAGGTCTGGTAGGGCTGAGCTTGCAAGAGGATCAACATGCCTGTGAGTTGTTTACATCGGGCTCCGGGTTTGTTTTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482846.1 |
||
| CDS TCA 72 bp | AACCCGGAGCCCGATGTAAACAACTCACAGGCATGTTaGTCCTCTTGCAAGCTCAGCCCTACCAGACCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: NPEPDVNNSQAC*SSCKLSPTRPP Trigger: GGGAGGTCTGGTAGGGCTGAGCTTGCAAGAGGATCAACATGCCTGTGAGTTGTTTACATCGGGCTCCGGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482846.1 |
||
| CDS CAA 72 bp | AAACCCGGAGCCCGATGTAAACAACTCACAGGCATGTaGATCCTCTTGCAAGCTCAGCCCTACCAGACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: KPGARCKQLTGM*ILLQAQPYQTS Trigger: GGAGGTCTGGTAGGGCTGAGCTTGCAAGAGGATCAACATGCCTGTGAGTTGTTTACATCGGGCTCCGGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482846.1 |
||
| CDS CCA 72 bp | CGAAAGAAGGCAGAGGGGGCGAGAAACACCAATCACTaGGAAAGCCAAAAGACCCAAAGATCACAACCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: RKKAEGARNTNH*ESQKTQRSQPQ Trigger: CTGAGGTTGTGATCTTTGGGTCTTTTGGCTTTCCCAGTGATTGGTGTTTCTCGCCCCCTCTGCCTTCTTTCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000455271.5 ENST00000482846.1 |
||
| CDS CAA 90 bp | AAATCTCTAGCCAACAGAGAGATTATGAAAGAGGCTCGTATCCTTTaGGCTTCCCTTTTCAAGGCGCAGATTTCGAAGTTTTCTGCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: KSLANREIMKEARIL*ASLFKAQISKFSAG Trigger: CCCCGCAGAAAACTTCGAAATCTGCGCCTTGAAAAGGGAAGCCAAAAGGATACGAGCCTCTTTCATAATCTCTCTGTTGGCTAGAGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000411926.1 |
||
| CDS TCA 72 bp | CTCAGATTTGCTGCCAATCCACTTGAACTCTTCCAGTaGGAGCATGGAACTTACAGCTCCCCAAAATATCAC | + |
|
Preference number: 6 (lower is better) Translates to: LRFAANPLELFQ*EHGTYSSPKYH Trigger: GTGATATTTTGGGGAGCTGTAAGTTCCATGCTCTCACTGGAAGAGTTCAAGTGGATTGGCAGCAAATCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000482846.1 |
||
| CDS CAA 72 bp | GCTGATCTGACAGGAATTCTTGCTGAGCGACCGTCCTaGACGGAATTAATATATAAGGCAACAACGAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: ADLTGILAERPS*TELIYKATTRT Trigger: TGTCCTCGTTGTTGCCTTATATATTAATTCCGTCAAGGACGGTCGCTCAGCAAGAATTCCTGTCAGATCAGC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000455271.5 ENST00000482846.1 |
||
| CDS TCA 72 bp | CCTTCTTTACTCAACTGCGTAATGAACTGTCTTCGATaGAAACTGCGCGAAGTCGAGGTGCTAAGCAAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: PSLLNCVMNCLR*KLREVEVLSKE Trigger: TTCTTTGCTTAGCACCTCGACTTCGCGCAGTTTTCATCGAAGACAGTTCATTACGCAGTTGAGTAAAGAAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482846.1 |
||
| CDS TCA 72 bp | ACACCAAATAGATCTCAGATTTGCTGCCAATCCACTTaGACTCTTCCAGTGAGAGCATGGAACTTACAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: TPNRSQICCQST*TLPVRAWNLQL Trigger: GAGCTGTAAGTTCCATGCTCTCACTGGAAGAGTTCAAGTGGATTGGCAGCAAATCTGAGATCTATTTGGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482846.1 |
||
| CDS CAA 72 bp | GCCAACAGAGAGATTATGAAAGAGGCTCGTATCCTTTaGGCTTCCCTTTTCAAGGCGCAGATTTCGAAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: ANREIMKEARIL*ASLFKAQISKF Trigger: AAACTTCGAAATCTGCGCCTTGAAAAGGGAAGCCAAAAGGATACGAGCCTCTTTCATAATCTCTCTGTTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000411926.1 |
||
| CDS CAA 90 bp | GGCTCAACAGCTGATCTGACAGGAATTCTTGCTGAGCGACCGTCCTaGACGGAATTAATATATAAGGCAACAACGAGGACAGTTTTTAAA | + |
|
Preference number: 6 (lower is better) Translates to: GSTADLTGILAERPS*TELIYKATTRTVFK Trigger: TTTAAAAACTGTCCTCGTTGTTGCCTTATATATTAATTCCGTCAAGGACGGTCGCTCAGCAAGAATTCCTGTCAGATCAGCTGTTGAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000455271.5 ENST00000482846.1 |
||
| CDS CAA 90 bp | GAAAAGGGCTTTCGCACGATCAGGAAACATATGGTAAGGCAAACTTaGTCCTTCTTTACTCAACTGCGTAATGAACTGTCTTCGATGAAA | + |
|
Preference number: 6 (lower is better) Translates to: EKGFRTIRKHMVRQT*SFFTQLRNELSSMK Trigger: TTTCATCGAAGACAGTTCATTACGCAGTTGAGTAAAGAAGGACAAAGTTTGCCTTACCATATGTTTCCTGATCGTGCGAAAGCCCTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000482846.1 |
||
| CDS CAA 72 bp | TTTCGCACGATCAGGAAACATATGGTAAGGCAAACTTaGTCCTTCTTTACTCAACTGCGTAATGAACTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: FRTIRKHMVRQT*SFFTQLRNELS Trigger: AGACAGTTCATTACGCAGTTGAGTAAAGAAGGACAAAGTTTGCCTTACCATATGTTTCCTGATCGTGCGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000482846.1 |
||
| CDS TCA 72 bp | GTTTTAAACCACAACGCTGGCACATTTAACCATACGTaGAATATACATGCAAAAACAGGAATAACGGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: VLNHNAGTFNHT*NIHAKTGITVI Trigger: GATGACCGTTATTCCTGTTTTTGCATGTATATTTCACGTATGGTTAAATGTGCCAGCGTTGTGGTTTAAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000462430.5 ENST00000482846.1 |
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