Pregenerated sensors for RPS27 (Homo sapiens)
Ensembl gene IDs: ENSG00000177954Ensembl transcript IDs: ENST00000392558.4, ENST00000477151.2, ENST00000493224.5, ENST00000643794.1
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CCGCCATCTTATCTCCTCTCCGCTCCCGTCTATGCGGGTGGCCCGTaGGCCGCTGCGGTCCCTGGAGTTAATGTCAGGCATGTTCTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: PPSYLLSAPVYAGGP*AAAVPGVNVRHVLV Trigger: CACGAGAACATGCCTGACATTAACTCCAGGGACCGCAGCGGCCCACGGGCCACCCGCATAGACGGGAGCGGAGAGGAGATAAGATGGCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643794.1 |
||
| CDS CCA 90 bp | CCGCCATCTTATCTCCTCTCCGCTCCCGTCTATGCGGGTGGCCCGTaGGCCGCTGCGGTCCCTGGAGTTAATGTCCTAAGAAGTGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PPSYLLSAPVYAGGP*AAAVPGVNVLRSAE Trigger: CTCTGCACTTCTTAGGACATTAACTCCAGGGACCGCAGCGGCCCACGGGCCACCCGCATAGACGGGAGCGGAGAGGAGATAAGATGGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493224.5 |
||
| CDS TCA 90 bp | GCTGCGGTCCCTGGAGTTAATGTCCTAAGAAGTGCAGAGGGTAAATaGGGACCCTCTACGATCCGAAATCAGCGTGAGGGGAGAGTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: AAVPGVNVLRSAEGK*GPSTIRNQREGRVR Trigger: CCGAACTCTCCCCTCACGCTGATTTCGGATCGTAGAGGGTCCTCATTTACCCTCTGCACTTCTTAGGACATTAACTCCAGGGACCGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000493224.5 |
||
| CDS GCA 90 bp | ACGAGACAGCTAACACTACAACATTTTCCAACTGTTGAGGTCCAGTaGTTTCCCCACTACAGCAAGCCGTCTCCTCACCTGGGCATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TRQLTLQHFPTVEVQ*FPHYSKPSPHLGIS Trigger: TGAAATGCCCAGGTGAGGAGACGGCTTGCTGTAGTGGGGAAAGCACTGGACCTCAACAGTTGGAAAATGTTGTAGTGTTAGCTGTCTCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392558.4 |
||
| CDS GCA 72 bp | TGGGCCGCCATCTTATCTCCTCTCCGCTCCCGTCTATaGGGGTGGCCCGTGGGCCGCTGCGGTCCCTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: WAAILSPLRSRL*GWPVGRCGPWS Trigger: ACTCCAGGGACCGCAGCGGCCCACGGGCCACCCGCATAGACGGGAGCGGAGAGGAGATAAGATGGCGGCCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000477151.2 ENST00000493224.5 ENST00000643794.1 |
||
| CDS CCA 72 bp | GAGCTCGCCCCTCGCCGCCCCTGGTGTCTGCGCAGCTaGGCCGCCATCTTATCTCCTCTCCGCTCCCGTCTA | + |
|
Preference number: 6 (lower is better) Translates to: ELAPRRPWCLRS*AAILSPLRSRL Trigger: TAGACGGGAGCGGAGAGGAGATAAGATGGCGGCCCAGCTGCGCAGACACCAGGGGCGGCGAGGGGCGAGCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000477151.2 ENST00000493224.5 ENST00000643794.1 |
||
| CDS CCA 72 bp | TATCTCCTCTCCGCTCCCGTCTATGCGGGTGGCCCGTaGGCCGCTGCGGTCCCTGGAGTTAATGTCAGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: YLLSAPVYAGGP*AAAVPGVNVRH Trigger: ATGCCTGACATTAACTCCAGGGACCGCAGCGGCCCACGGGCCACCCGCATAGACGGGAGCGGAGAGGAGATA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643794.1 |
||
| CDS CCA 72 bp | TATCTCCTCTCCGCTCCCGTCTATGCGGGTGGCCCGTaGGCCGCTGCGGTCCCTGGAGTTAATGTCCTAAGA | + |
|
Preference number: 6 (lower is better) Translates to: YLLSAPVYAGGP*AAAVPGVNVLR Trigger: TCTTAGGACATTAACTCCAGGGACCGCAGCGGCCCACGGGCCACCCGCATAGACGGGAGCGGAGAGGAGATA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493224.5 |
||
| CDS TCA 72 bp | CCTGGAGTTAATGTCCTAAGAAGTGCAGAGGGTAAATaGGGACCCTCTACGATCCGAAATCAGCGTGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: PGVNVLRSAEGK*GPSTIRNQREG Trigger: CCCCTCACGCTGATTTCGGATCGTAGAGGGTCCTCATTTACCCTCTGCACTTCTTAGGACATTAACTCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000493224.5 |
||
| CDS GCA 72 bp | CTAACACTACAACATTTTCCAACTGTTGAGGTCCAGTaGTTTCCCCACTACAGCAAGCCGTCTCCTCACCTG | + |
|
Preference number: 6 (lower is better) Translates to: LTLQHFPTVEVQ*FPHYSKPSPHL Trigger: CAGGTGAGGAGACGGCTTGCTGTAGTGGGGAAAGCACTGGACCTCAACAGTTGGAAAATGTTGTAGTGTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000392558.4 |
||