Pregenerated sensors for RPS25 (Homo sapiens)
Ensembl gene IDs: ENSG00000118181Ensembl transcript IDs: ENST00000524864.1, ENST00000527791.5, ENST00000527853.1, ENST00000628755.1, ENST00000629062.1, ENST00000630540.2
Found 11 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GAGGCCGGCAGGCCAAGGAGCGCTCCCGCCGAAGGCTCTCCCCACTaGGTCCTCAAACCCAAGAACGCCGGCGACTTCACACCCCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: EAGRPRSAPAEGSPH*VLKPKNAGDFTPLK Trigger: CTTCAGGGGTGTGAAGTCGCCGGCGTTCTTGGGTTTGAGGACTCAGTGGGGAGAGCCTTCGGCGGGAGCGCTCCTTGGCCTGCCGGCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000527853.1 ENST00000628755.1 |
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| CDS TCA 90 bp | AGCCAGGCAGAAGAAGTCCCACGGCGAAGCGCTCGCCCTCTAGCCTaGGGCGGAAGACAGGAAGTGGATTCTAGTTCCCAAGCCGCACCG | + |
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Preference number: 5 (lower is better) Translates to: SQAEEVPRRSARPLA*GGRQEVDSSSQAAP Trigger: CGGTGCGGCTTGGGAACTAGAATCCACTTCCTGTCTTCCGCCTCAGGCTAGAGGGCGAGCGCTTCGCCGTGGGACTTCTTCTGCCTGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000524864.1 ENST00000527791.5 ENST00000527853.1 ENST00000628755.1 ENST00000629062.1 ENST00000630540.2 |
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| CDS GCA 90 bp | AAGCAATCCACCAGGTCTCGGCAGCTAACTTTCCGGCACTACTTATaGCCGAGCGTGTCGCTCCCAGTGCGCAAGTGCAGCAGGTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: KQSTRSRQLTFRHYL*PSVSLPVRKCSRWL Trigger: CAGCCACCTGCTGCACTTGCGCACTGGGAGCGACACGCTCGGGCATAAGTAGTGCCGGAAAGTTAGCTGCCGAGACCTGGTGGATTGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000524864.1 ENST00000527791.5 ENST00000527853.1 ENST00000628755.1 ENST00000629062.1 ENST00000630540.2 |
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| CDS GCA 90 bp | CCGGAGTCTGCGCTAGTTGTGACGCATACTATAGCGCTGTTTTCCTaGACTGATAAACGAAAAGCAATCCACCAGGTCTCGGCAGCTAAC | + |
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Preference number: 5 (lower is better) Translates to: PESALVVTHTIALFS*TDKRKAIHQVSAAN Trigger: GTTAGCTGCCGAGACCTGGTGGATTGCTTTTCGTTTATCAGTGCAGGAAAACAGCGCTATAGTATGCGTCACAACTAGCGCAGACTCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000524864.1 ENST00000527791.5 ENST00000527853.1 ENST00000628755.1 ENST00000629062.1 ENST00000630540.2 |
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| CDS GCA 90 bp | AAGTTAGTATTTCTGGCAGAAGCACCCTTTCCCTCTCGAGTAATCTaGGTCAGAGAAATCTGTTCCACCGTTATCAAGGATAAATTACAC | + |
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Preference number: 5 (lower is better) Translates to: KLVFLAEAPFPSRVI*VREICSTVIKDKLH Trigger: GTGTAATTTATCCTTGATAACGGTGGAACAGATTTCTCTGACGCAGATTACTCGAGAGGGAAAGGGTGCTTCTGCCAGAAATACTAACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000524864.1 ENST00000527853.1 ENST00000628755.1 ENST00000629062.1 |
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| CDS TCA 72 bp | AGGCCAAGGAGCGCTCCCGCCGAAGGCTCTCCCCACTaGGTCCTCAAACCCAAGAACGCCGGCGACTTCACA | + |
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Preference number: 6 (lower is better) Translates to: RPRSAPAEGSPH*VLKPKNAGDFT Trigger: TGTGAAGTCGCCGGCGTTCTTGGGTTTGAGGACTCAGTGGGGAGAGCCTTCGGCGGGAGCGCTCCTTGGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000527853.1 ENST00000628755.1 |
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| CDS GCA 72 bp | ACCAGGTCTCGGCAGCTAACTTTCCGGCACTACTTATaGCCGAGCGTGTCGCTCCCAGTGCGCAAGTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: TRSRQLTFRHYL*PSVSLPVRKCS Trigger: GCTGCACTTGCGCACTGGGAGCGACACGCTCGGGCATAAGTAGTGCCGGAAAGTTAGCTGCCGAGACCTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000524864.1 ENST00000527791.5 ENST00000527853.1 ENST00000628755.1 ENST00000629062.1 ENST00000630540.2 |
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| CDS TCA 72 bp | GAAGAAGTCCCACGGCGAAGCGCTCGCCCTCTAGCCTaGGGCGGAAGACAGGAAGTGGATTCTAGTTCCCAA | + |
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Preference number: 6 (lower is better) Translates to: EEVPRRSARPLA*GGRQEVDSSSQ Trigger: TTGGGAACTAGAATCCACTTCCTGTCTTCCGCCTCAGGCTAGAGGGCGAGCGCTTCGCCGTGGGACTTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000524864.1 ENST00000527791.5 ENST00000527853.1 ENST00000628755.1 ENST00000629062.1 ENST00000630540.2 |
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| CDS GCA 72 bp | GTTCCCAAGCCGCACCGCCTAAATACTGCCGGAGTCTaGGCTAGTTGTGACGCATACTATAGCGCTGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: VPKPHRLNTAGV*ASCDAYYSAVF Trigger: GAAAACAGCGCTATAGTATGCGTCACAACTAGCGCAGACTCCGGCAGTATTTAGGCGGTGCGGCTTGGGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000524864.1 ENST00000527791.5 ENST00000527853.1 ENST00000628755.1 ENST00000629062.1 ENST00000630540.2 |
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| CDS GCA 72 bp | GCGCTAGTTGTGACGCATACTATAGCGCTGTTTTCCTaGACTGATAAACGAAAAGCAATCCACCAGGTCTCG | + |
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Preference number: 6 (lower is better) Translates to: ALVVTHTIALFS*TDKRKAIHQVS Trigger: CGAGACCTGGTGGATTGCTTTTCGTTTATCAGTGCAGGAAAACAGCGCTATAGTATGCGTCACAACTAGCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000524864.1 ENST00000527791.5 ENST00000527853.1 ENST00000628755.1 ENST00000629062.1 ENST00000630540.2 |
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| CDS GCA 72 bp | TTTCTGGCAGAAGCACCCTTTCCCTCTCGAGTAATCTaGGTCAGAGAAATCTGTTCCACCGTTATCAAGGAT | + |
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Preference number: 6 (lower is better) Translates to: FLAEAPFPSRVI*VREICSTVIKD Trigger: ATCCTTGATAACGGTGGAACAGATTTCTCTGACGCAGATTACTCGAGAGGGAAAGGGTGCTTCTGCCAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000524864.1 ENST00000527853.1 ENST00000628755.1 ENST00000629062.1 |
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