Pregenerated sensors for RPS18 (Homo sapiens)
Ensembl gene IDs: ENSG00000096150, ENSG00000235650Ensembl transcript IDs: ENST00000461584.5, ENST00000463232.5, ENST00000464602.1, ENST00000470852.5, ENST00000472218.1, ENST00000473705.1, ENST00000475634.5, ENST00000482698.1, ENST00000482819.1, ENST00000485674.1, ENST00000489474.1, ENST00000490191.5
Found 21 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ATACAGAAAGTCGCAGGCCCTCAGGGCAGGACGTTTCCAGAACCCTaGCAGCCGGCTTTCCTTGCCCGAGCTGCGATGCCGCTGGATCAC | + |
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Preference number: 5 (lower is better) Translates to: IQKVAGPQGRTFPEP*QPAFLARAAMPLDH Trigger: GTGATCCAGCGGCATCGCAGCTCGGGCAAGGAAAGCCGGCTGTCAGGGTTCTGGAAACGTCCTGCCCTGAGGGCCTGCGACTTTCTGTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000461584.5 ENST00000463232.5 ENST00000470852.5 ENST00000473705.1 ENST00000475634.5 ENST00000490191.5 |
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| CDS GCA 90 bp | AAAGCCAGAGTTCCCCATATACGCCCAAGCCTTAGACAGCTTTCGTaGGCCCGAGCAGTGACCCTTCCTCGGGCCCGCTCTCCGGAATTG | + |
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Preference number: 5 (lower is better) Translates to: KARVPHIRPSLRQLS*ARAVTLPRARSPEL Trigger: CAATTCCGGAGAGCGGGCCCGAGGAAGGGTCACTGCTCGGGCGCACGAAAGCTGTCTAAGGCTTGGGCGTATATGGGGAACTCTGGCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000461584.5 ENST00000463232.5 ENST00000470852.5 ENST00000473705.1 ENST00000475634.5 ENST00000490191.5 |
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| CDS TCA 90 bp | CCCATATACGCCCAAGCCTTAGACAGCTTTCGTGCGCCCGAGCAGTaGCCCTTCCTCGGGCCCGCTCTCCGGAATTGGAAATCTTTGGTG | + |
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Preference number: 5 (lower is better) Translates to: PIYAQALDSFRAPEQ*PFLGPALRNWKSLV Trigger: CACCAAAGATTTCCAATTCCGGAGAGCGGGCCCGAGGAAGGGTCACTGCTCGGGCGCACGAAAGCTGTCTAAGGCTTGGGCGTATATGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000461584.5 ENST00000463232.5 ENST00000470852.5 ENST00000473705.1 ENST00000475634.5 ENST00000490191.5 |
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| CDS CCA 90 bp | AGCAGTGACCCTTCCTCGGGCCCGCTCTCCGGAATTGGAAATCTTTaGTGTCCCTTTCCAGGGACGCGATCCAAGGCTCCATACAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: SSDPSSGPLSGIGNL*CPFPGTRSKAPYRK Trigger: CTTTCTGTATGGAGCCTTGGATCGCGTCCCTGGAAAGGGACACCAAAGATTTCCAATTCCGGAGAGCGGGCCCGAGGAAGGGTCACTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000461584.5 ENST00000463232.5 ENST00000470852.5 ENST00000473705.1 ENST00000475634.5 ENST00000490191.5 |
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| CDS GCA 90 bp | CTTGGGAGGCTGCAGCAGAATAGCTTGAACCTAGGAGGTGGAGGTTaGAGCAAGCCAAGATCACGCAACCACACTCTAACCTGGGCGACA | + |
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Preference number: 5 (lower is better) Translates to: LGRLQQNSLNLGGGG*SKPRSRNHTLTWAT Trigger: TGTCGCCCAGGTTAGAGTGTGGTTGCGTGATCTTGGCTTGCTGCAACCTCCACCTCCTAGGTTCAAGCTATTCTGCTGCAGCCTCCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000464602.1 ENST00000472218.1 ENST00000482698.1 ENST00000482819.1 ENST00000485674.1 ENST00000489474.1 |
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| CDS CCA 90 bp | CAGAGTAGGCACATGAAGCGTTCAAGCTTGGGAAAATGCAACCTCTaGAGAGAGGAAGCAGGTCTCCTGCCCATTCCCAAAAGTGCGTGG | + |
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Preference number: 5 (lower is better) Translates to: QSRHMKRSSLGKCNL*REEAGLLPIPKSAW Trigger: CCACGCACTTTTGGGAATGGGCAGGAGACCTGCTTCCTCTCTCCAGAGGTTGCATTTTCCCAAGCTTGAACGCTTCATGTGCCTACTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000461584.5 ENST00000463232.5 ENST00000470852.5 ENST00000473705.1 ENST00000475634.5 ENST00000490191.5 |
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| CDS GCA 90 bp | TCAGTCCTGCAGAGTAGGCACATGAAGCGTTCAAGCTTGGGAAAATaGAACCTCTGGAGAGAGGAAGCAGGTCTCCTGCCCATTCCCAAA | + |
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Preference number: 5 (lower is better) Translates to: SVLQSRHMKRSSLGK*NLWREEAGLLPIPK Trigger: TTTGGGAATGGGCAGGAGACCTGCTTCCTCTCTCCAGAGGTTGCATTTTCCCAAGCTTGAACGCTTCATGTGCCTACTCTGCAGGACTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000461584.5 ENST00000463232.5 ENST00000470852.5 ENST00000473705.1 ENST00000475634.5 ENST00000490191.5 |
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| CDS TCA 72 bp | GTCGCAGGCCCTCAGGGCAGGACGTTTCCAGAACCCTaGCAGCCGGCTTTCCTTGCCCGAGCTGCGATGCCG | + |
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Preference number: 6 (lower is better) Translates to: VAGPQGRTFPEP*QPAFLARAAMP Trigger: CGGCATCGCAGCTCGGGCAAGGAAAGCCGGCTGTCAGGGTTCTGGAAACGTCCTGCCCTGAGGGCCTGCGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000461584.5 ENST00000463232.5 ENST00000470852.5 ENST00000473705.1 ENST00000475634.5 ENST00000490191.5 |
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| CDS CAA 72 bp | GCAGGACGTTTCCAGAACCCTGACAGCCGGCTTTCCTaGCCCGAGCTGCGATGCCGCTGGATCACGGCACGG | + |
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Preference number: 6 (lower is better) Translates to: AGRFQNPDSRLS*PELRCRWITAR Trigger: CCGTGCCGTGATCCAGCGGCATCGCAGCTCGGGCAAGGAAAGCCGGCTGTCAGGGTTCTGGAAACGTCCTGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000461584.5 ENST00000463232.5 ENST00000470852.5 ENST00000473705.1 ENST00000475634.5 ENST00000490191.5 |
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| CDS GCA 72 bp | CAGGACGTTTCCAGAACCCTGACAGCCGGCTTTCCTTaGCCGAGCTGCGATGCCGCTGGATCACGGCACGGA | + |
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Preference number: 6 (lower is better) Translates to: QDVSRTLTAGFP*PSCDAAGSRHG Trigger: TCCGTGCCGTGATCCAGCGGCATCGCAGCTCGGGCAAGGAAAGCCGGCTGTCAGGGTTCTGGAAACGTCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000461584.5 ENST00000463232.5 ENST00000470852.5 ENST00000473705.1 ENST00000475634.5 ENST00000490191.5 |
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| CDS CAA 90 bp | TCGTGCGCCCGAGCAGTGACCCTTCCTCGGGCCCGCTCTCCGGAATaGGAAATCTTTGGTGTCCCTTTCCAGGGACGCGATCCAAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: SCARAVTLPRARSPE*EIFGVPFQGRDPRL Trigger: GAGCCTTGGATCGCGTCCCTGGAAAGGGACACCAAAGATTTCCAATTCCGGAGAGCGGGCCCGAGGAAGGGTCACTGCTCGGGCGCACGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000461584.5 ENST00000463232.5 ENST00000470852.5 ENST00000473705.1 ENST00000475634.5 ENST00000490191.5 |
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| CDS TCA 72 bp | GCCCAAGCCTTAGACAGCTTTCGTGCGCCCGAGCAGTaGCCCTTCCTCGGGCCCGCTCTCCGGAATTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: AQALDSFRAPEQ*PFLGPALRNWK Trigger: TTTCCAATTCCGGAGAGCGGGCCCGAGGAAGGGTCACTGCTCGGGCGCACGAAAGCTGTCTAAGGCTTGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000461584.5 ENST00000463232.5 ENST00000470852.5 ENST00000473705.1 ENST00000475634.5 ENST00000490191.5 |
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| CDS GCA 72 bp | GTTCCCCATATACGCCCAAGCCTTAGACAGCTTTCGTaGGCCCGAGCAGTGACCCTTCCTCGGGCCCGCTCT | + |
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Preference number: 6 (lower is better) Translates to: VPHIRPSLRQLS*ARAVTLPRARS Trigger: AGAGCGGGCCCGAGGAAGGGTCACTGCTCGGGCGCACGAAAGCTGTCTAAGGCTTGGGCGTATATGGGGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000461584.5 ENST00000463232.5 ENST00000470852.5 ENST00000473705.1 ENST00000475634.5 ENST00000490191.5 |
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| CDS CAA 72 bp | CCCTTCCTCGGGCCCGCTCTCCGGAATTGGAAATCTTaGGTGTCCCTTTCCAGGGACGCGATCCAAGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: PFLGPALRNWKS*VSLSRDAIQGS Trigger: GGAGCCTTGGATCGCGTCCCTGGAAAGGGACACCAAAGATTTCCAATTCCGGAGAGCGGGCCCGAGGAAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000461584.5 ENST00000463232.5 ENST00000470852.5 ENST00000473705.1 ENST00000475634.5 ENST00000490191.5 |
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| CDS CCA 72 bp | CCTTCCTCGGGCCCGCTCTCCGGAATTGGAAATCTTTaGTGTCCCTTTCCAGGGACGCGATCCAAGGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PSSGPLSGIGNL*CPFPGTRSKAP Trigger: TGGAGCCTTGGATCGCGTCCCTGGAAAGGGACACCAAAGATTTCCAATTCCGGAGAGCGGGCCCGAGGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000461584.5 ENST00000463232.5 ENST00000470852.5 ENST00000473705.1 ENST00000475634.5 ENST00000490191.5 |
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| CDS CAA 72 bp | CGAGCAGTGACCCTTCCTCGGGCCCGCTCTCCGGAATaGGAAATCTTTGGTGTCCCTTTCCAGGGACGCGAT | + |
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Preference number: 6 (lower is better) Translates to: RAVTLPRARSPE*EIFGVPFQGRD Trigger: ATCGCGTCCCTGGAAAGGGACACCAAAGATTTCCAATTCCGGAGAGCGGGCCCGAGGAAGGGTCACTGCTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000461584.5 ENST00000463232.5 ENST00000470852.5 ENST00000473705.1 ENST00000475634.5 ENST00000490191.5 |
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| CDS CAA 90 bp | GCAAACTCCTCAGTCCTGCAGAGTAGGCACATGAAGCGTTCAAGCTaGGGAAAATGCAACCTCTGGAGAGAGGAAGCAGGTCTCCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: ANSSVLQSRHMKRSS*GKCNLWREEAGLLP Trigger: GGGCAGGAGACCTGCTTCCTCTCTCCAGAGGTTGCATTTTCCCAAGCTTGAACGCTTCATGTGCCTACTCTGCAGGACTGAGGAGTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000461584.5 ENST00000463232.5 ENST00000470852.5 ENST00000473705.1 ENST00000475634.5 ENST00000490191.5 |
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| CDS GCA 72 bp | CTGCAGCAGAATAGCTTGAACCTAGGAGGTGGAGGTTaGAGCAAGCCAAGATCACGCAACCACACTCTAACC | + |
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Preference number: 6 (lower is better) Translates to: LQQNSLNLGGGG*SKPRSRNHTLT Trigger: GGTTAGAGTGTGGTTGCGTGATCTTGGCTTGCTGCAACCTCCACCTCCTAGGTTCAAGCTATTCTGCTGCAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000464602.1 ENST00000472218.1 ENST00000482698.1 ENST00000482819.1 ENST00000485674.1 ENST00000489474.1 |
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| CDS CCA 72 bp | CACATGAAGCGTTCAAGCTTGGGAAAATGCAACCTCTaGAGAGAGGAAGCAGGTCTCCTGCCCATTCCCAAA | + |
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Preference number: 6 (lower is better) Translates to: HMKRSSLGKCNL*REEAGLLPIPK Trigger: TTTGGGAATGGGCAGGAGACCTGCTTCCTCTCTCCAGAGGTTGCATTTTCCCAAGCTTGAACGCTTCATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000461584.5 ENST00000463232.5 ENST00000470852.5 ENST00000473705.1 ENST00000475634.5 ENST00000490191.5 |
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| CDS CAA 72 bp | TCAGTCCTGCAGAGTAGGCACATGAAGCGTTCAAGCTaGGGAAAATGCAACCTCTGGAGAGAGGAAGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: SVLQSRHMKRSS*GKCNLWREEAG Trigger: ACCTGCTTCCTCTCTCCAGAGGTTGCATTTTCCCAAGCTTGAACGCTTCATGTGCCTACTCTGCAGGACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000461584.5 ENST00000463232.5 ENST00000470852.5 ENST00000473705.1 ENST00000475634.5 ENST00000490191.5 |
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| CDS GCA 72 bp | AAAGCTCACAAAGGTAGGATCTGCAATAATCTATTTTaGAATCCCCTAGGTCACCCTTTCCTCACCCACCTT | + |
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Preference number: 6 (lower is better) Translates to: KAHKGRICNNLF*NPLGHPFLTHL Trigger: AAGGTGGGTGAGGAAAGGGTGACCTAGGGGATTGCAAAATAGATTATTGCAGATCCTACCTTTGTGAGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000464602.1 ENST00000472218.1 ENST00000482698.1 ENST00000485674.1 ENST00000489474.1 |
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