Pregenerated sensors for RPS16 (Homo sapiens)
Ensembl gene IDs: ENSG00000105193Ensembl transcript IDs: ENST00000339471.8, ENST00000595386.1, ENST00000601390.1, ENST00000602153.5
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CAA 90 bp | CTTCTTGGAAGCCTCATCCACATCTGGCAAGAAGAGCAGGGACGAGGATTTAGACACAGAGTCCTTGACTaGATCCCCACACACCCATCT | + |
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Preference number: 3 (lower is better) Translates to: LLGSLIHIWQEEQGRGFRHRVLD*IPTHPS Trigger: AGATGGGTGTGTGGGGATCAAGTCAAGGACTCTGTG...TCTAAATCCTCGTCCCTGCTCTTCTTGCCAGATGTGGATGAGGCTTCCAAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602153.5 |
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| 3UTR TCA 72 bp | GACGAGGATTTAGATAATCACACAGAGTCCTTGACTTaGTCCCCACACACCCATCTACCTCATGGGAAGGAC | + |
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Preference number: 3 (lower is better) Translates to: DEDLDNHTESLT*SPHTHLPHGKD Trigger: GTCCTTCCCATGAGGTAGATGGGTGTGTGGGGATCAAGTCAAGGACTCTGTGTGATTATCTAAATCCTCGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602153.5 |
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| CDS-3UTR TCA 90 bp | CTTCTTGGAAGCCTCATCCACATCTGGCAAGAAGAGCAGGGACGAGGATTTAGAACAGAGTCCTTGACTTaGTCCCCACACACCCATCTA | + |
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Preference number: 4 (lower is better) Translates to: LLGSLIHIWQEEQGRGFRTESLT*SPHTHL Trigger: TAGATGGGTGTGTGGGGATCAAGTCAAGGACTCTGT...TCTAAATCCTCGTCCCTGCTCTTCTTGCCAGATGTGGATGAGGCTTCCAAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602153.5 |
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| CDS-3UTR CCA 90 bp | GCCTCATCCACATCTGGCAAGAAGAGCAGGGACGAGGATTTAGATAATCACACAAGCCTCATCCACATCTaGCAAGAAGAGCAGGGACGA | + |
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Preference number: 4 (lower is better) Translates to: ASSTSGKKSRDEDLDNHTSLIHI*QEEQGR Trigger: TCGTCCCTGCTCTTCTTGCCAGATGTGGATGAGGCT...TGTGTGATTATCTAAATCCTCGTCCCTGCTCTTCTTGCCAGATGTGGATGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602153.5 |
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| CDS-3UTR GCA 90 bp | CTTCTTGGAAGCCTCATCCACATCTGGCAAGAAGAGCAGGGACGAGGATTTAGACATGGGAAGGACCCATaGTCACTCACATTTCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: LLGSLIHIWQEEQGRGFRHGKDP*SLTFLV Trigger: TACCAGAAATGTGAGTGAGCATGGGTCCTTCCCATG...TCTAAATCCTCGTCCCTGCTCTTCTTGCCAGATGTGGATGAGGCTTCCAAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000602153.5 |
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| CDS GCA 90 bp | TACAGGAGCGCTGTGAAGGCCTCCCTCCCAGAGCCACCTCCTCCATaGGCCCAGTTCCTGGGACTCACCATAAATCTGGGCCACGTGACC | + |
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Preference number: 5 (lower is better) Translates to: YRSAVKASLPEPPPP*AQFLGLTINLGHVT Trigger: GGTCACGTGGCCCAGATTTATGGTGAGTCCCAGGAACTGGGCGCATGGAGGAGGTGGCTCTGGGAGGGAGGCCTTCACAGCGCTCCTGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000339471.8 ENST00000595386.1 |
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| CDS CCA 90 bp | TGTTTCTGTGGCTTCTGCCACCACTGGCCTTCAAGTACTAGTGGATaGGGGTCAGGGTGTCACTCCAAGGCCCTCTACAGACCCAGAGAA | + |
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Preference number: 5 (lower is better) Translates to: CFCGFCHHWPSSTSG*GSGCHSKALYRPRE Trigger: TTCTCTGGGTCTGTAGAGGGCCTTGGAGTGACACCCTGACCCCCATCCACTAGTACTTGAAGGCCAGTGGTGGCAGAAGCCACAGAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000595386.1 ENST00000601390.1 |
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| CDS CCA 90 bp | GGATCAGCTTCTGGTATTGGGCCCAGTCCTTCTCCCCAACTAGGCTaGCAGGTCCATGAAGGCAAGACCTTAAGTCATCTGGATCACTGC | + |
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Preference number: 5 (lower is better) Translates to: GSASGIGPSPSPQLG*QVHEGKTLSHLDHC Trigger: GCAGTGATCCAGATGACTTAAGGTCTTGCCTTCATGGACCTGCCAGCCTAGTTGGGGAGAAGGACTGGGCCCAATACCAGAAGCTGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601390.1 |
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| CDS TCA 90 bp | TGGTATTGGGCCCAGTCCTTCTCCCCAACTAGGCTGGCAGGTCCATaGAGGCAAGACCTTAAGTCATCTGGATCACTGCTATGTCCCCAA | + |
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Preference number: 5 (lower is better) Translates to: WYWAQSFSPTRLAGP*RQDLKSSGSLLCPQ Trigger: TTGGGGACATAGCAGTGATCCAGATGACTTAAGGTCTTGCCTTCATGGACCTGCCAGCCTAGTTGGGGAGAAGGACTGGGCCCAATACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000601390.1 |
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| CDS GCA 90 bp | TGTCCCTGGTCCCTAGACCCTTCCCAGCTCCAGGTCTTTTACCAGTaGCTCTGTCTGGATACTTCCTTTACCTGCTTTCAGCTCACAGGT | + |
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Preference number: 5 (lower is better) Translates to: CPWSLDPSQLQVFYQ*LCLDTSFTCFQLTG Trigger: ACCTGTGAGCTGAAAGCAGGTAAAGGAAGTATCCAGACAGAGGCACTGGTAAAAGACCTGGAGCTGGGAAGGGTCTAGGGACCAGGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000595386.1 ENST00000601390.1 |
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| CDS TCA 90 bp | ACTTCCTTTACCTGCTTTCAGCTCACAGGTCTCCTTCCCCAGTTCTaGCCACTTTGGATCAGCTTCTGGTATTGGGCCCAGTCCTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: TSFTCFQLTGLLPQF*PLWISFWYWAQSFS Trigger: GGAGAAGGACTGGGCCCAATACCAGAAGCTGATCCAAAGTGGTCAGAACTGGGGAAGGAGACCTGTGAGCTGAAAGCAGGTAAAGGAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000595386.1 ENST00000601390.1 |
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| CDS CCA 90 bp | TCTTTGAGCCTCACAGGTTTCCAGAATTACAGTACAACCTGTCCCTaGTCCCTAGACCCTTCCCAGCTCCAGGTCTTTTACCAGTGCCTC | + |
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Preference number: 5 (lower is better) Translates to: SLSLTGFQNYSTTCP*SLDPSQLQVFYQCL Trigger: GAGGCACTGGTAAAAGACCTGGAGCTGGGAAGGGTCTAGGGACCAGGGACAGGTTGTACTGTAATTCTGGAAACCTGTGAGGCTCAAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000595386.1 ENST00000601390.1 |
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| CDS CCA 90 bp | TCACACAGAGTCCTTGACTTGATCCCCACACACCCATCTACCTCATaGGAAGGACCCATGCTCACTCACATTTCTGGTAATAGGCCACCA | + |
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Preference number: 5 (lower is better) Translates to: SHRVLDLIPTHPSTS*EGPMLTHISGNRPP Trigger: TGGTGGCCTATTACCAGAAATGTGAGTGAGCATGGGTCCTTCCCATGAGGTAGATGGGTGTGTGGGGATCAAGTCAAGGACTCTGTGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602153.5 |
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| CDS TCA 90 bp | AAGAGCAGGGACGAGGATTTAGATAATCACACAGAGTCCTTGACTTaGTCCCCACACACCCATCTACCTCATGGGAAGGACCCATGCTCA | + |
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Preference number: 5 (lower is better) Translates to: KSRDEDLDNHTESLT*SPHTHLPHGKDPCS Trigger: TGAGCATGGGTCCTTCCCATGAGGTAGATGGGTGTGTGGGGATCAAGTCAAGGACTCTGTGTGATTATCTAAATCCTCGTCCCTGCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000602153.5 |
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| CDS TCA 90 bp | GGCAATAAAGTGAGACCCCACGTCTACAGAAAAATATTTCTCAAATaGGCCAGGCGTGGTGATGTGCCTGTAGTCTTGGCAACCGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: GNKVRPHVYRKIFLK*ARRGDVPVVLATER Trigger: CCTTTCGGTTGCCAAGACTACAGGCACATCACCACGCCTGGCTCATTTGAGAAATATTTTTCTGTAGACGTGGGGTCTCACTTTATTGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000601390.1 |
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| CDS TCA 90 bp | AGAGTTCAGAAGGGGCAGAAATCAGACTCTGGTTTCTTTCCATTCTaGGCCAAAGAAATTGAGAGTCCCAAAAAGGGAACAGAGGAACCC | + |
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Preference number: 5 (lower is better) Translates to: RVQKGQKSDSGFFPF*AKEIESPKKGTEEP Trigger: GGGTTCCTCTGTTCCCTTTTTGGGACTCTCAATTTCTTTGGCTCAGAATGGAAAGAAACCAGAGTCTGATTTCTGCCCCTTCTGAACTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000601390.1 |
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| CDS CCA 72 bp | GGCTTCTGCCACCACTGGCCTTCAAGTACTAGTGGATaGGGGTCAGGGTGTCACTCCAAGGCCCTCTACAGA | + |
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Preference number: 6 (lower is better) Translates to: GFCHHWPSSTSG*GSGCHSKALYR Trigger: TCTGTAGAGGGCCTTGGAGTGACACCCTGACCCCCATCCACTAGTACTTGAAGGCCAGTGGTGGCAGAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000595386.1 ENST00000601390.1 |
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| CDS TCA 72 bp | GCCCAGTCCTTCTCCCCAACTAGGCTGGCAGGTCCATaGAGGCAAGACCTTAAGTCATCTGGATCACTGCTA | + |
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Preference number: 6 (lower is better) Translates to: AQSFSPTRLAGP*RQDLKSSGSLL Trigger: TAGCAGTGATCCAGATGACTTAAGGTCTTGCCTTCATGGACCTGCCAGCCTAGTTGGGGAGAAGGACTGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601390.1 |
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| CDS TCA 72 bp | ACCTGCTTTCAGCTCACAGGTCTCCTTCCCCAGTTCTaGCCACTTTGGATCAGCTTCTGGTATTGGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: TCFQLTGLLPQF*PLWISFWYWAQ Trigger: CTGGGCCCAATACCAGAAGCTGATCCAAAGTGGTCAGAACTGGGGAAGGAGACCTGTGAGCTGAAAGCAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000595386.1 ENST00000601390.1 |
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| CDS CCA 72 bp | GATGTGCCTGTAGTCTTGGCAACCGAAAGGCTGAGGTaGGAGGATCTCCAACTCAGGAGTTTAAGGCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: DVPVVLATERLR*EDLQLRSLRLQ Trigger: CTGCAGCCTTAAACTCCTGAGTTGGAGATCCTCCCACCTCAGCCTTTCGGTTGCCAAGACTACAGGCACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601390.1 |
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| CDS CCA 72 bp | TCTGGTATTGGGCCCAGTCCTTCTCCCCAACTAGGCTaGCAGGTCCATGAAGGCAAGACCTTAAGTCATCTG | + |
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Preference number: 6 (lower is better) Translates to: SGIGPSPSPQLG*QVHEGKTLSHL Trigger: CAGATGACTTAAGGTCTTGCCTTCATGGACCTGCCAGCCTAGTTGGGGAGAAGGACTGGGCCCAATACCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000601390.1 |
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| CDS CAA 72 bp | TCAGCTCACAGGTCTCCTTCCCCAGTTCTGACCACTTaGGATCAGCTTCTGGTATTGGGCCCAGTCCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: SAHRSPSPVLTT*DQLLVLGPVLL Trigger: GAGAAGGACTGGGCCCAATACCAGAAGCTGATCCAAAGTGGTCAGAACTGGGGAAGGAGACCTGTGAGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000595386.1 ENST00000601390.1 |
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| CDS CAA 72 bp | TACATGCTGGGCAGCTTAGCCATCTCACTGGGCTTCTaGTTTCTGTGGCTTCTGCCACCACTGGCCTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: YMLGSLAISLGF*FLWLLPPLAFK Trigger: CTTGAAGGCCAGTGGTGGCAGAAGCCACAGAAACAAGAAGCCCAGTGAGATGGCTAAGCTGCCCAGCATGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000595386.1 ENST00000601390.1 |
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| CDS GCA 72 bp | TCCCTAGACCCTTCCCAGCTCCAGGTCTTTTACCAGTaGCTCTGTCTGGATACTTCCTTTACCTGCTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: SLDPSQLQVFYQ*LCLDTSFTCFQ Trigger: CTGAAAGCAGGTAAAGGAAGTATCCAGACAGAGGCACTGGTAAAAGACCTGGAGCTGGGAAGGGTCTAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000595386.1 ENST00000601390.1 |
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| CDS CCA 72 bp | CTCACAGGTTTCCAGAATTACAGTACAACCTGTCCCTaGTCCCTAGACCCTTCCCAGCTCCAGGTCTTTTAC | + |
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Preference number: 6 (lower is better) Translates to: LTGFQNYSTTCP*SLDPSQLQVFY Trigger: GTAAAAGACCTGGAGCTGGGAAGGGTCTAGGGACCAGGGACAGGTTGTACTGTAATTCTGGAAACCTGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000595386.1 ENST00000601390.1 |
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| CDS CAA 90 bp | AAATATAGGCAAGGTAAAGGGAACAAGATCTGGGCTCCCTCCTACTaGTGTCCCTCACTGGACCTCAGACACCCTACCTCTAAGACTGGT | + |
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Preference number: 6 (lower is better) Translates to: KYRQGKGNKIWAPSY*CPSLDLRHPTSKTG Trigger: ACCAGTCTTAGAGGTAGGGTGTCTGAGGTCCAGTGAGGGACACAAGTAGGAGGGAGCCCAGATCTTGTTCCCTTTACCTTGCCTATATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000595386.1 ENST00000601390.1 |
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| CDS CAA 90 bp | TTCAGGTGCCTTTTCTATTTCCCACCTGAGCTCTCTGCCCTTTCTTaGAGCCTCACAGGTTTCCAGAATTACAGTACAACCTGTCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: FRCLFYFPPELSALS*SLTGFQNYSTTCPW Trigger: CCAGGGACAGGTTGTACTGTAATTCTGGAAACCTGTGAGGCTCAAAGAAAGGGCAGAGAGCTCAGGTGGGAAATAGAAAAGGCACCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000595386.1 ENST00000601390.1 |
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| CDS CAA 72 bp | AGGAGTTTAAGGCTGCAGTTCATTAGGATTGTGCTATaGCACTCCAGGGTAGGTGACAGCAAGATACTGTTT | + |
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Preference number: 6 (lower is better) Translates to: RSLRLQFIRIVL*HSRVGDSKILF Trigger: AAACAGTATCTTGCTGTCACCTACCCTGGAGTGCAATAGCACAATCCTAATGAACTGCAGCCTTAAACTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000601390.1 |
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