Pregenerated sensors for RPS10 (Homo sapiens)
Ensembl gene IDs: ENSG00000124614Ensembl transcript IDs: ENST00000344700.8, ENST00000464218.5, ENST00000480942.1, ENST00000644393.1, ENST00000644700.1
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGGAGTATGGCCACCCACCCAGAGTGTGTTCATACATACTCCTATaGAAGCATCCAGCACCAGGATTGGACCGTTTCTACTGTACATGC | + |
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Preference number: 1 (lower is better) Translates to: WEYGHPPRVCSYILL*KHPAPGLDRFYCTC Trigger: GCATGTACAGTAGAAACGGTCCAATCCTGGTGCTGGATGCTTTCATAGGAGTATGTATGAACACACTCTGGGTGGGTGGCCATACTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| 3UTR TCA 90 bp | ATTATAACTCCAGAGGCCCCCAAATGTAAACAGCTGGGAGAGAGCTaGGTACAGGCTATAAATCCCAGCACTGCCCCTTACTGGATGTGG | + |
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Preference number: 1 (lower is better) Translates to: IITPEAPKCKQLGES*VQAINPSTAPYWMW Trigger: CCACATCCAGTAAGGGGCAGTGCTGGGATTTATAGCCTGTACTCAGCTCTCTCCCAGCTGTTTACATTTGGGGGCCTCTGGAGTTATAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| 3UTR CCA 90 bp | GTGGGGCCATATCTAACATCTAGGCCCATTTCTTCATTGGTAAAGTaGGAGTATGGCCACCCACCCAGAGTGTGTTCATACATACTCCTA | + |
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Preference number: 1 (lower is better) Translates to: VGPYLTSRPISSLVK*EYGHPPRVCSYILL Trigger: TAGGAGTATGTATGAACACACTCTGGGTGGGTGGCCATACTCCCACTTTACCAATGAAGAAATGGGCCTAGATGTTAGATATGGCCCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| 3UTR CAA 90 bp | TTACTGGATGTGGGGCCATATCTAACATCTAGGCCCATTTCTTCATaGGTAAAGTGGGAGTATGGCCACCCACCCAGAGTGTGTTCATAC | + |
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Preference number: 2 (lower is better) Translates to: LLDVGPYLTSRPISS*VKWEYGHPPRVCSY Trigger: GTATGAACACACTCTGGGTGGGTGGCCATACTCCCACTTTACCAATGAAGAAATGGGCCTAGATGTTAGATATGGCCCCACATCCAGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| 3UTR-3UTR TCA 90 bp | TTCTTCATTGGTAAAGTGGGAGTATGGCCACCCACCCAGAGTGTGTTCATACATAGCAATCGTGTGCTATaGGGACCTGCCATAGGACAA | + |
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Preference number: 2 (lower is better) Translates to: FFIGKVGVWPPTQSVFIHSNRVL*GPAIGQ Trigger: TTGTCCTATGGCAGGTCCTCATAGCACACGATTGCT...ATGTATGAACACACTCTGGGTGGGTGGCCATACTCCCACTTTACCAATGAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| 3UTR-3UTR TCA 90 bp | ACATCTAGGCCCATTTCTTCATTGGTAAAGTGGGAGTATGGCCACCCACCCAGAGTAGGCCACATGTACTaGTTTCTGAGACTCATTTCA | + |
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Preference number: 2 (lower is better) Translates to: TSRPISSLVKWEYGHPPRVGHMY*FLRLIS Trigger: TGAAATGAGTCTCAGAAATCAGTACATGTGGCCTAC...TCTGGGTGGGTGGCCATACTCCCACTTTACCAATGAAGAAATGGGCCTAGATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| 3UTR-3UTR TCA 90 bp | ACATCTAGGCCCATTTCTTCATTGGTAAAGTGGGAGTATGGCCACCCACCCAGAACAAATGACATTATCTaGGAGCAATCGTGTGCTATG | + |
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Preference number: 2 (lower is better) Translates to: TSRPISSLVKWEYGHPPRTNDII*EQSCAM Trigger: CATAGCACACGATTGCTCTCAGATAATGTCATTTGT...TCTGGGTGGGTGGCCATACTCCCACTTTACCAATGAAGAAATGGGCCTAGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| 3UTR-3UTR TCA 90 bp | GTTCATACATACTCCTATGAAAGCATCCAGCACCAGGATTGGACCGTTTCTACTGCCATAGGACAAAAATaGTATGCCAGTACTATGCCT | + |
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Preference number: 2 (lower is better) Translates to: VHTYSYESIQHQDWTVSTAIGQK*YASTMP Trigger: AGGCATAGTACTGGCATATCATTTTTGTCCTATGGC...AGTAGAAACGGTCCAATCCTGGTGCTGGATGCTTTCATAGGAGTATGTATGAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| 3UTR TCA 72 bp | CCAGAGGCCCCCAAATGTAAACAGCTGGGAGAGAGCTaGGTACAGGCTATAAATCCCAGCACTGCCCCTTAC | + |
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Preference number: 3 (lower is better) Translates to: PEAPKCKQLGES*VQAINPSTAPY Trigger: GTAAGGGGCAGTGCTGGGATTTATAGCCTGTACTCAGCTCTCTCCCAGCTGTTTACATTTGGGGGCCTCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| 3UTR TCA 72 bp | GGCCACCCACCCAGAGTGTGTTCATACATACTCCTATaGAAGCATCCAGCACCAGGATTGGACCGTTTCTAC | + |
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Preference number: 3 (lower is better) Translates to: GHPPRVCSYILL*KHPAPGLDRFY Trigger: GTAGAAACGGTCCAATCCTGGTGCTGGATGCTTTCATAGGAGTATGTATGAACACACTCTGGGTGGGTGGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| 3UTR GCA 72 bp | GGGAGAGAGCTGAGTACAGGCTATAAATCCCAGCACTaGCCCTTACTGGATGTGGGGCCATATCTAACATCT | + |
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Preference number: 3 (lower is better) Translates to: GRELSTGYKSQH*PLLDVGPYLTS Trigger: AGATGTTAGATATGGCCCCACATCCAGTAAGGGGCAGTGCTGGGATTTATAGCCTGTACTCAGCTCTCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| 3UTR TCA 72 bp | AAAGCACATCACATCAGCATGAGCGGCACTCTGGTTTaGTCTTTGGAGGTTTTGCTAACTTTCAGGCCTCAT | + |
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Preference number: 3 (lower is better) Translates to: KAHHISMSGTLV*SLEVLLTFRPH Trigger: ATGAGGCCTGAAAGTTAGCAAAACCTCCAAAGATCAAACCAGAGTGCCGCTCATGCTGATGTGATGTGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| 3UTR CCA 72 bp | TATCTAACATCTAGGCCCATTTCTTCATTGGTAAAGTaGGAGTATGGCCACCCACCCAGAGTGTGTTCATAC | + |
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Preference number: 3 (lower is better) Translates to: YLTSRPISSLVK*EYGHPPRVCSY Trigger: GTATGAACACACTCTGGGTGGGTGGCCATACTCCCACTTTACCAATGAAGAAATGGGCCTAGATGTTAGATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| 3UTR CCA 72 bp | CATACATACTCCTATGAAAGCATCCAGCACCAGGATTaGACCGTTTCTACTGTACATGCTTCCTTTTTACAA | + |
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Preference number: 3 (lower is better) Translates to: HTYSYESIQHQD*TVSTVHASFLQ Trigger: TTGTAAAAAGGAAGCATGTACAGTAGAAACGGTCCAATCCTGGTGCTGGATGCTTTCATAGGAGTATGTATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| CDS-3UTR TCA 90 bp | TCCACGACCAAATCCGCCTCTTCCTATGAAAGCATCCAGCACCAGGATTGGACCATCCGCCTCTTCCTATaGAAGCATCCAGCACCAGGA | + |
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Preference number: 4 (lower is better) Translates to: STTKSASSYESIQHQDWTIRLFL*KHPAPG Trigger: TCCTGGTGCTGGATGCTTTCATAGGAAGAGGCGGAT...GGTCCAATCCTGGTGCTGGATGCTTTCATAGGAAGAGGCGGATTTGGTCGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344700.8 |
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| CDS-3UTR CCA 90 bp | GTGGGAGTATGGCCACCCACCCAGAGTGTGTTCATACATACTCCTATGAAAGCAGTGGGAGGAGGGAACTaGTTGACAGGACCCACCCAT | + |
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Preference number: 4 (lower is better) Translates to: VGVWPPTQSVFIHTPMKAVGGGN*LTGPTH Trigger: ATGGGTGGGTCCTGTCAACCAGTTCCCTCCTCCCAC...TGCTTTCATAGGAGTATGTATGAACACACTCTGGGTGGGTGGCCATACTCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| CDS-3UTR TCA 90 bp | CCTATGAAAGCATCCAGCACCAGGATTGGACCGTTTCTACTGTACATGCTTCCTGAGGAGGGAACTGGTTaGCAGGACCCACCCATACTA | + |
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Preference number: 4 (lower is better) Translates to: PMKASSTRIGPFLLYMLPEEGTG*QDPPIL Trigger: TAGTATGGGTGGGTCCTGTCAACCAGTTCCCTCCTC...AGGAAGCATGTACAGTAGAAACGGTCCAATCCTGGTGCTGGATGCTTTCATAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| 3UTR CAA 72 bp | GTGGGGCCATATCTAACATCTAGGCCCATTTCTTCATaGGTAAAGTGGGAGTATGGCCACCCACCCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VGPYLTSRPISS*VKWEYGHPPRV Trigger: CACTCTGGGTGGGTGGCCATACTCCCACTTTACCAATGAAGAAATGGGCCTAGATGTTAGATATGGCCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| CDS-3UTR TCA 90 bp | ACATCTAGGCCCATTTCTTCATTGGTAAAGTGGGAGTATGGCCACCCACCCAGACCCACCCATACTATATaGCATCCCCACAACTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: TSRPISSLVKWEYGHPPRPTHTI*HPHNLQ Trigger: CTGCAAGTTGTGGGGATGTCATATAGTATGGGTGGG...TCTGGGTGGGTGGCCATACTCCCACTTTACCAATGAAGAAATGGGCCTAGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| CDS-3UTR GCA 90 bp | CCTATGAAAGCATCCAGCACCAGGATTGGACCGTTTCTACTGTACATGCTTCCTGACATCCCCACAACTTaGAGAGCAACCAGACTGAGG | + |
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Preference number: 4 (lower is better) Translates to: PMKASSTRIGPFLLYMLPDIPTT*RATRLR Trigger: CCTCAGTCTGGTTGCTCTGCAAGTTGTGGGGATGTC...AGGAAGCATGTACAGTAGAAACGGTCCAATCCTGGTGCTGGATGCTTTCATAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| CDS-3UTR CCA 90 bp | TCCACGACCAAATCCGCCTCTTCCTATGAAAGCATCCAGCACCAGGATTGGACCATCCAGCACCAGGATTaGACCGTTTCTACTGTACAT | + |
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Preference number: 4 (lower is better) Translates to: STTKSASSYESIQHQDWTIQHQD*TVSTVH Trigger: ATGTACAGTAGAAACGGTCCAATCCTGGTGCTGGAT...GGTCCAATCCTGGTGCTGGATGCTTTCATAGGAAGAGGCGGATTTGGTCGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344700.8 |
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| CDS-3UTR TCA 90 bp | CCACGACCAAATCCGCCTCTTCCTATGAAAGCATCCAGCACCAGGATTGGACCGACAAATGACATTATCTaGGAGCAATCGTGTGCTATG | + |
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Preference number: 4 (lower is better) Translates to: PRPNPPLPMKASSTRIGPTNDII*EQSCAM Trigger: CATAGCACACGATTGCTCTCAGATAATGTCATTTGT...CGGTCCAATCCTGGTGCTGGATGCTTTCATAGGAAGAGGCGGATTTGGTCGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344700.8 |
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| CDS-3UTR CCA 90 bp | ATACATACTCCTATGAAAGCATCCAGCACCAGGATTGGACCGTTTCTACTGTACGGTAAAGTGGGAGTATaGCCACCCACCCAGAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: IHTPMKASSTRIGPFLLYGKVGV*PPTQSV Trigger: CACACTCTGGGTGGGTGGCCATACTCCCACTTTACC...GTACAGTAGAAACGGTCCAATCCTGGTGCTGGATGCTTTCATAGGAGTATGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| CDS-3UTR CCA 90 bp | CCTATGAAAGCATCCAGCACCAGGATTGGACCGTTTCTACTGTACATGCTTCCTTCTTCATTGGTAAAGTaGGAGTATGGCCACCCACCC | + |
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Preference number: 4 (lower is better) Translates to: PMKASSTRIGPFLLYMLPSSLVK*EYGHPP Trigger: GGGTGGGTGGCCATACTCCCACTTTACCAATGAAGA...AGGAAGCATGTACAGTAGAAACGGTCCAATCCTGGTGCTGGATGCTTTCATAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| CDS-3UTR CCA 90 bp | ACATCTAGGCCCATTTCTTCATTGGTAAAGTGGGAGTATGGCCACCCACCCAGACCAAATGTAAACAGCTaGGAGAGAGCTGAGTACAGG | + |
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Preference number: 4 (lower is better) Translates to: TSRPISSLVKWEYGHPPRPNVNS*ERAEYR Trigger: CCTGTACTCAGCTCTCTCCCAGCTGTTTACATTTGG...TCTGGGTGGGTGGCCATACTCCCACTTTACCAATGAAGAAATGGGCCTAGATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| CDS-3UTR TCA 90 bp | TTCTTCATTGGTAAAGTGGGAGTATGGCCACCCACCCAGAGTGTGTTCATACATCACATCACATCAGCATaGGCGGCACTCTGGTTTGAT | + |
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Preference number: 4 (lower is better) Translates to: FFIGKVGVWPPTQSVFIHHITSA*AALWFD Trigger: ATCAAACCAGAGTGCCGCTCATGCTGATGTGATGTG...ATGTATGAACACACTCTGGGTGGGTGGCCATACTCCCACTTTACCAATGAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| CDS-3UTR TCA 90 bp | GTATGGCCACCCACCCAGAGTGTGTTCATACATACTCCTATGAAAGCATCCAGCTCATACATACTCCTATaGAAGCATCCAGCACCAGGA | + |
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Preference number: 4 (lower is better) Translates to: VWPPTQSVFIHTPMKASSSYILL*KHPAPG Trigger: TCCTGGTGCTGGATGCTTTCATAGGAGTATGTATGA...GCTGGATGCTTTCATAGGAGTATGTATGAACACACTCTGGGTGGGTGGCCATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| CDS-3UTR TCA 90 bp | GTGTTCATACATACTCCTATGAAAGCATCCAGCACCAGGATTGGACCGTTTCTACAGCTGGGAGAGAGCTaGGTACAGGCTATAAATCCC | + |
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Preference number: 4 (lower is better) Translates to: VFIHTPMKASSTRIGPFLQLGES*VQAINP Trigger: GGGATTTATAGCCTGTACTCAGCTCTCTCCCAGCTG...TAGAAACGGTCCAATCCTGGTGCTGGATGCTTTCATAGGAGTATGTATGAACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| CDS-3UTR TCA 90 bp | GTTCATACATACTCCTATGAAAGCATCCAGCACCAGGATTGGACCGTTTCTACTAGCAATCGTGTGCTATaGGGACCTGCCATAGGACAA | + |
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Preference number: 4 (lower is better) Translates to: VHTYSYESIQHQDWTVSTSNRVL*GPAIGQ Trigger: TTGTCCTATGGCAGGTCCTCATAGCACACGATTGCT...AGTAGAAACGGTCCAATCCTGGTGCTGGATGCTTTCATAGGAGTATGTATGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| 3UTR CAA 72 bp | GAAAGCACATCACATCAGCATGAGCGGCACTCTGGTTaGATCTTTGGAGGTTTTGCTAACTTTCAGGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: ESTSHQHERHSG*IFGGFANFQAS Trigger: TGAGGCCTGAAAGTTAGCAAAACCTCCAAAGATCAAACCAGAGTGCCGCTCATGCTGATGTGATGTGCTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| CDS-3UTR TCA 90 bp | GTGTTCATACATACTCCTATGAAAGCATCCAGCACCAGGATTGGACCGTTTCTAAGCGGCACTCTGGTTTaGTCTTTGGAGGTTTTGCTA | + |
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Preference number: 4 (lower is better) Translates to: VFIHTPMKASSTRIGPFLSGTLV*SLEVLL Trigger: TAGCAAAACCTCCAAAGATCAAACCAGAGTGCCGCT...TAGAAACGGTCCAATCCTGGTGCTGGATGCTTTCATAGGAGTATGTATGAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| CDS-3UTR CCA 90 bp | ATACATACTCCTATGAAAGCATCCAGCACCAGGATTGGACCGTTTCTACTGTACATCCAGCACCAGGATTaGACCGTTTCTACTGTACAT | + |
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Preference number: 4 (lower is better) Translates to: IHTPMKASSTRIGPFLLYIQHQD*TVSTVH Trigger: ATGTACAGTAGAAACGGTCCAATCCTGGTGCTGGAT...GTACAGTAGAAACGGTCCAATCCTGGTGCTGGATGCTTTCATAGGAGTATGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| CDS-3UTR TCA 90 bp | GTGTTCATACATACTCCTATGAAAGCATCCAGCACCAGGATTGGACCGTTTCTAGTAGGCCACATGTACTaGTTTCTGAGACTCATTTCA | + |
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Preference number: 4 (lower is better) Translates to: VFIHTPMKASSTRIGPFLVGHMY*FLRLIS Trigger: TGAAATGAGTCTCAGAAATCAGTACATGTGGCCTAC...TAGAAACGGTCCAATCCTGGTGCTGGATGCTTTCATAGGAGTATGTATGAACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| CDS-3UTR GCA 90 bp | TTCTTCATTGGTAAAGTGGGAGTATGGCCACCCACCCAGAGTGTGTTCATACATTGTGCTATGAGGACCTaGCATAGGACAAAAATGATA | + |
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Preference number: 4 (lower is better) Translates to: FFIGKVGVWPPTQSVFIHCAMRT*HRTKMI Trigger: TATCATTTTTGTCCTATGGCAGGTCCTCATAGCACA...ATGTATGAACACACTCTGGGTGGGTGGCCATACTCCCACTTTACCAATGAAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| CDS-3UTR TCA 90 bp | GTTCATACATACTCCTATGAAAGCATCCAGCACCAGGATTGGACCGTTTCTACTACAAATGACATTATCTaGGAGCAATCGTGTGCTATG | + |
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Preference number: 4 (lower is better) Translates to: VHTYSYESIQHQDWTVSTTNDII*EQSCAM Trigger: CATAGCACACGATTGCTCTCAGATAATGTCATTTGT...AGTAGAAACGGTCCAATCCTGGTGCTGGATGCTTTCATAGGAGTATGTATGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| CDS-3UTR CAA 90 bp | CCACGACCAAATCCGCCTCTTCCTATGAAAGCATCCAGCACCAGGATTGGACCGCATCCAGCACCAGGATaGGACCGTTTCTACTGTACA | + |
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Preference number: 5 (lower is better) Translates to: PRPNPPLPMKASSTRIGPHPAPG*DRFYCT Trigger: TGTACAGTAGAAACGGTCCAATCCTGGTGCTGGATG...CGGTCCAATCCTGGTGCTGGATGCTTTCATAGGAAGAGGCGGATTTGGTCGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000344700.8 |
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| CDS TCA 90 bp | AAAGTGGGAGGAGGGAACTGGTTGACAGGACCCACCCATACTATATaGCATCCCCACAACTTGCAGAGCAACCAGACTGAGGCCAGAACA | + |
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Preference number: 5 (lower is better) Translates to: KVGGGNWLTGPTHTI*HPHNLQSNQTEART Trigger: TGTTCTGGCCTCAGTCTGGTTGCTCTGCAAGTTGTGGGGATGTCATATAGTATGGGTGGGTCCTGTCAACCAGTTCCCTCCTCCCACTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| CDS TCA 90 bp | AGTTCTATTCCAAGTCCCAAGCCATGGGACAAAGGTTCTAGCACTTaGCCAAATGCCTGCAGGCCAGAGCCCTCTAAAGCTGACATCAGC | + |
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Preference number: 5 (lower is better) Translates to: SSIPSPKPWDKGSST*PNACRPEPSKADIS Trigger: GCTGATGTCAGCTTTAGAGGGCTCTGGCCTGCAGGCATTTGGTCAAGTGCTAGAACCTTTGTCCCATGGCTTGGGACTTGGAATAGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480942.1 |
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| CDS-3UTR CAA 90 bp | TTCTTCATTGGTAAAGTGGGAGTATGGCCACCCACCCAGAGTGTGTTCATACATGGAGGAGGGAACTGGTaGACAGGACCCACCCATACT | + |
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Preference number: 5 (lower is better) Translates to: FFIGKVGVWPPTQSVFIHGGGNW*TGPTHT Trigger: AGTATGGGTGGGTCCTGTCAACCAGTTCCCTCCTCC...ATGTATGAACACACTCTGGGTGGGTGGCCATACTCCCACTTTACCAATGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| CDS TCA 90 bp | GAAAGTGACAGACTATCTGTGCTTAAGGCCATCTCATGGATGGCCTaGAGAACTGAGTCTAGTTCTATTCCAAGTCCCAAGCCATGGGAC | + |
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Preference number: 5 (lower is better) Translates to: ESDRLSVLKAISWMA*RTESSSIPSPKPWD Trigger: GTCCCATGGCTTGGGACTTGGAATAGAACTAGACTCAGTTCTTCAGGCCATCCATGAGATGGCCTTAAGCACAGATAGTCTGTCACTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480942.1 |
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| CDS-3UTR CAA 90 bp | GTTCATACATACTCCTATGAAAGCATCCAGCACCAGGATTGGACCGTTTCTACTCATCCAGCACCAGGATaGGACCGTTTCTACTGTACA | + |
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Preference number: 5 (lower is better) Translates to: VHTYSYESIQHQDWTVSTHPAPG*DRFYCT Trigger: TGTACAGTAGAAACGGTCCAATCCTGGTGCTGGATG...AGTAGAAACGGTCCAATCCTGGTGCTGGATGCTTTCATAGGAGTATGTATGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| CDS GCA 90 bp | TGGATGTTTGTACAGGTGTGGGTGAAGAAAGTGACAGACTATCTGTaGTTAAGGCCATCTCATGGATGGCCTGAAGAACTGAGTCTAGTT | + |
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Preference number: 5 (lower is better) Translates to: WMFVQVWVKKVTDYL*LRPSHGWPEELSLV Trigger: AACTAGACTCAGTTCTTCAGGCCATCCATGAGATGGCCTTAAGCACAGATAGTCTGTCACTTTCTTCACCCACACCTGTACAAACATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480942.1 |
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| CDS CCA 90 bp | GTGAAGAAAGTGACAGACTATCTGTGCTTAAGGCCATCTCATGGATaGCCTGAAGAACTGAGTCTAGTTCTATTCCAAGTCCCAAGCCAT | + |
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Preference number: 5 (lower is better) Translates to: VKKVTDYLCLRPSHG*PEELSLVLFQVPSH Trigger: ATGGCTTGGGACTTGGAATAGAACTAGACTCAGTTCTTCAGGCCATCCATGAGATGGCCTTAAGCACAGATAGTCTGTCACTTTCTTCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480942.1 |
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| CDS-3UTR CAA 90 bp | ATACATACTCCTATGAAAGCATCCAGCACCAGGATTGGACCGTTTCTACTGTACAGGCCCATTTCTTCATaGGTAAAGTGGGAGTATGGC | + |
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Preference number: 5 (lower is better) Translates to: IHTPMKASSTRIGPFLLYRPISS*VKWEYG Trigger: GCCATACTCCCACTTTACCAATGAAGAAATGGGCCT...GTACAGTAGAAACGGTCCAATCCTGGTGCTGGATGCTTTCATAGGAGTATGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| CDS CCA 90 bp | TTGGCAAGAAAACTACAACACTCTTGTTTCTTTCGAGGTGGTAAATaGCTTTGCTTTGGACTTCTCGGGAATAGTACAACGCACTCTGCG | + |
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Preference number: 5 (lower is better) Translates to: LARKLQHSCFFRGGK*LCFGLLGNSTTHSA Trigger: CGCAGAGTGCGTTGTACTATTCCCGAGAAGTCCAAAGCAAAGCCATTTACCACCTCGAAAGAAACAAGAGTGTTGTAGTTTTCTTGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480942.1 |
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| CDS GCA 90 bp | AGAAAACTACAACACTCTTGTTTCTTTCGAGGTGGTAAATGGCTTTaGTTTGGACTTCTCGGGAATAGTACAACGCACTCTGCGGGAAAA | + |
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Preference number: 5 (lower is better) Translates to: RKLQHSCFFRGGKWL*FGLLGNSTTHSAGK Trigger: TTTTCCCGCAGAGTGCGTTGTACTATTCCCGAGAAGTCCAAAGCAAAGCCATTTACCACCTCGAAAGAAACAAGAGTGTTGTAGTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480942.1 |
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| CDS CCA 90 bp | TACTCAATATTCTATACCACATGTATCTGGATGTTTGTACAGGTGTaGGTGAAGAAAGTGACAGACTATCTGTGCTTAAGGCCATCTCAT | + |
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Preference number: 5 (lower is better) Translates to: YSIFYTTCIWMFVQV*VKKVTDYLCLRPSH Trigger: ATGAGATGGCCTTAAGCACAGATAGTCTGTCACTTTCTTCACCCACACCTGTACAAACATCCAGATACATGTGGTATAGAATATTGAGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480942.1 |
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| CDS TCA 72 bp | CCAAGTCCCAAGCCATGGGACAAAGGTTCTAGCACTTaGCCAAATGCCTGCAGGCCAGAGCCCTCTAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: PSPKPWDKGSST*PNACRPEPSKA Trigger: AGCTTTAGAGGGCTCTGGCCTGCAGGCATTTGGTCAAGTGCTAGAACCTTTGTCCCATGGCTTGGGACTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480942.1 |
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| CDS CAA 72 bp | TTCTTAGGCATCAACATCCTGTATTATCGGGAGCAGTaGGAGGCCATCAGCGACCGTACCCAGCGCGGAATC | + |
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Preference number: 6 (lower is better) Translates to: FLGINILYYREQ*EAISDRTQRGI Trigger: GATTCCGCGCTGGGTACGGTCGCTGATGGCCTCCAACTGCTCCCGATAATACAGGATGTTGATGCCTAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000464218.5 |
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| CDS TCA 72 bp | GGAGGGAACTGGTTGACAGGACCCACCCATACTATATaGCATCCCCACAACTTGCAGAGCAACCAGACTGAG | + |
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Preference number: 6 (lower is better) Translates to: GGNWLTGPTHTI*HPHNLQSNQTE Trigger: CTCAGTCTGGTTGCTCTGCAAGTTGTGGGGATGTCATATAGTATGGGTGGGTCCTGTCAACCAGTTCCCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| CDS GCA 72 bp | CAGGACCCACCCATACTATATGACATCCCCACAACTTaGAGAGCAACCAGACTGAGGCCAGAACAAGTGATG | + |
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Preference number: 6 (lower is better) Translates to: QDPPILYDIPTT*RATRLRPEQVM Trigger: CATCACTTGTTCTGGCCTCAGTCTGGTTGCTCTGCAAGTTGTGGGGATGTCATATAGTATGGGTGGGTCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644700.1 |
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| CDS GCA 72 bp | GTACAGGTGTGGGTGAAGAAAGTGACAGACTATCTGTaGTTAAGGCCATCTCATGGATGGCCTGAAGAACTG | + |
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Preference number: 6 (lower is better) Translates to: VQVWVKKVTDYL*LRPSHGWPEEL Trigger: CAGTTCTTCAGGCCATCCATGAGATGGCCTTAAGCACAGATAGTCTGTCACTTTCTTCACCCACACCTGTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480942.1 |
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| CDS TCA 72 bp | AAAGCACATCACATCAGCATGAGCGGCACTCTGGTTTaGTCTTTGGAGGTTTTGAAACTGGAATTCGGTTGC | + |
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Preference number: 6 (lower is better) Translates to: KAHHISMSGTLV*SLEVLKLEFGC Trigger: GCAACCGAATTCCAGTTTCAAAACCTCCAAAGATCAAACCAGAGTGCCGCTCATGCTGATGTGATGTGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644393.1 |
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| CDS CCA 72 bp | TCCGCCTCTTCCTATGAAAGCATCCAGCACCAGGATTaGACCGTTTCTACTGTACATGCTTCCTTTTTACAA | + |
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Preference number: 6 (lower is better) Translates to: SASSYESIQHQD*TVSTVHASFLQ Trigger: TTGTAAAAAGGAAGCATGTACAGTAGAAACGGTCCAATCCTGGTGCTGGATGCTTTCATAGGAAGAGGCGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000344700.8 |
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| CDS CAA 90 bp | AACTACAACACTCTTGTTTCTTTCGAGGTGGTAAATGGCTTTGCTTaGGACTTCTCGGGAATAGTACAACGCACTCTGCGGGAAAAGTTA | + |
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Preference number: 6 (lower is better) Translates to: NYNTLVSFEVVNGFA*DFSGIVQRTLREKL Trigger: TAACTTTTCCCGCAGAGTGCGTTGTACTATTCCCGAGAAGTCCAAAGCAAAGCCATTTACCACCTCGAAAGAAACAAGAGTGTTGTAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480942.1 |
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| CDS CCA 72 bp | TTCTATACCACATGTATCTGGATGTTTGTACAGGTGTaGGTGAAGAAAGTGACAGACTATCTGTGCTTAAGG | + |
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Preference number: 6 (lower is better) Translates to: FYTTCIWMFVQV*VKKVTDYLCLR Trigger: CCTTAAGCACAGATAGTCTGTCACTTTCTTCACCCACACCTGTACAAACATCCAGATACATGTGGTATAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480942.1 |
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| CDS CCA 72 bp | AAACTACAACACTCTTGTTTCTTTCGAGGTGGTAAATaGCTTTGCTTTGGACTTCTCGGGAATAGTACAACG | + |
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Preference number: 6 (lower is better) Translates to: KLQHSCFFRGGK*LCFGLLGNSTT Trigger: CGTTGTACTATTCCCGAGAAGTCCAAAGCAAAGCCATTTACCACCTCGAAAGAAACAAGAGTGTTGTAGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480942.1 |
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