Pregenerated sensors for RPRML (Homo sapiens)
Ensembl gene IDs: ENSG00000179673Ensembl transcript IDs: ENST00000322329.5
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GATTTCTTTCCAAACGCAAGATCAGGCCAACAAGCTCAGCGACTCTaGCGCTTCACATCTTCACCCACTCGCACCGTGTTCCGAACCCAC | + |
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Preference number: 1 (lower is better) Translates to: DFFPNARSGQQAQRL*RFTSSPTRTVFRTH Trigger: GTGGGTTCGGAACACGGTGCGAGTGGGTGAAGATGTGAAGCGTCAGAGTCGCTGAGCTTGTTGGCCTGATCTTGCGTTTGGAAAGAAATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| 3UTR CAA 90 bp | CCAACGTACACACAAAACTCCCACGCGAGCGACCGCAGTCCCAAATaGCATCTCCATACCCACTCCCACCCTGCCCCGAACGTCTTAAAA | + |
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Preference number: 2 (lower is better) Translates to: PTYTQNSHASDRSPK*HLHTHSHPAPNVLK Trigger: TTTTAAGACGTTCGGGGCAGGGTGGGAGTGGGTATGGAGATGCAATTTGGGACTGCGGTCGCTCGCGTGGGAGTTTTGTGTGTACGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| 3UTR-3UTR GCA 90 bp | AGCTGCCTGAAGCCCTACGGCTGCAGTTTTATTACAAGATTTCTTTCCAAACGCCCCACCCCGCAACGCTaGAGCGCACACAGGACAGAG | + |
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Preference number: 2 (lower is better) Translates to: SCLKPYGCSFITRFLSKRPTPQR*SAHRTE Trigger: CTCTGTCCTGTGTGCGCTGCAGCGTTGCGGGGTGGG...GCGTTTGGAAAGAAATCTTGTAATAAAACTGCAGCCGTAGGGCTTCAGGCAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| 3UTR GCA 72 bp | GAGCGGGGCGAGGGTCCGGGTCTCCGGGGTCCTTCTTaGAGCAGCGCTGGCGAGGGCGGACCCAGATGGCGC | + |
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Preference number: 3 (lower is better) Translates to: ERGEGPGLRGPS*SSAGEGGPRWR Trigger: GCGCCATCTGGGTCCGCCCTCGCCAGCGCTGCTGCAAGAAGGACCCCGGAGACCCGGACCCTCGCCCCGCTC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| 3UTR-3UTR CAA 90 bp | CGTGTTCCGAACCCACCCGCACCAACGTACACACAAAACTCCCACGCGAGCGACTCTCCGGGGTCCTTCTaGCAGCAGCGCTGGCGAGGG | + |
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Preference number: 3 (lower is better) Translates to: RVPNPPAPTYTQNSHASDSPGSF*QQRWRG Trigger: CCCTCGCCAGCGCTGCTGCAAGAAGGACCCCGGAGA...GTCGCTCGCGTGGGAGTTTTGTGTGTACGTTGGTGCGGGTGGGTTCGGAACACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| 3UTR GCA 72 bp | CACAAAACTCCCACGCGAGCGACCGCAGTCCCAAATTaGATCTCCATACCCACTCCCACCCTGCCCCGAACG | + |
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Preference number: 3 (lower is better) Translates to: HKTPTRATAVPN*ISIPTPTLPRT Trigger: CGTTCGGGGCAGGGTGGGAGTGGGTATGGAGATGCAATTTGGGACTGCGGTCGCTCGCGTGGGAGTTTTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| 3UTR-3UTR CAA 90 bp | CCCACTCGCACCGTGTTCCGAACCCACCCGCACCAACGTACACACAAAACTCCCGACCGCAGTCCCAAATaGCATCTCCATACCCACTCC | + |
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Preference number: 3 (lower is better) Translates to: PTRTVFRTHPHQRTHKTPDRSPK*HLHTHS Trigger: GGAGTGGGTATGGAGATGCAATTTGGGACTGCGGTC...GGGAGTTTTGTGTGTACGTTGGTGCGGGTGGGTTCGGAACACGGTGCGAGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| 3UTR TCA 72 bp | CCAAACGCAAGATCAGGCCAACAAGCTCAGCGACTCTaGCGCTTCACATCTTCACCCACTCGCACCGTGTTC | + |
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Preference number: 3 (lower is better) Translates to: PNARSGQQAQRL*RFTSSPTRTVF Trigger: GAACACGGTGCGAGTGGGTGAAGATGTGAAGCGTCAGAGTCGCTGAGCTTGTTGGCCTGATCTTGCGTTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS-3UTR GCA 90 bp | GGGTCTCCGGGGTCCTTCTTGCAGCAGCGCTGGCGAGGGCGGACCCAGATGGCGGCGACACCCACAGGCTaGGCTCGTCGGGCGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: GSPGSFLQQRWRGRTQMAATPTG*ARRAPA Trigger: GGCTGGCGCCCGACGAGCGCAGCCTGTGGGTGTCGC...CGCCATCTGGGTCCGCCCTCGCCAGCGCTGCTGCAAGAAGGACCCCGGAGACCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS-3UTR CCA 90 bp | GGGTCTCCGGGGTCCTTCTTGCAGCAGCGCTGGCGAGGGCGGACCCAGATGGCGCACGTGCCCAGCCCGTaGGTGCGGTTTCCCAGGGCG | + |
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Preference number: 4 (lower is better) Translates to: GSPGSFLQQRWRGRTQMAHVPSP*VRFPRA Trigger: CGCCCTGGGAAACCGCACCCACGGGCTGGGCACGTG...CGCCATCTGGGTCCGCCCTCGCCAGCGCTGCTGCAAGAAGGACCCCGGAGACCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS-3UTR GCA 90 bp | CACCCCGCAACGCTGCAGCGCACACAGGACAGAGCCGGGCGTCCAAGTCCCTTCGGGAGGCTGGCTGCCTaGGCGCTCTCGGGCCGCCTA | + |
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Preference number: 4 (lower is better) Translates to: HPATLQRTQDRAGRPSPFGRLAA*ALSGRL Trigger: TAGGCGGCCCGAGAGCGCGCAGGCAGCCAGCCTCCC...GAAGGGACTTGGACGCCCGGCTCTGTCCTGTGTGCGCTGCAGCGTTGCGGGGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS-3UTR GCA 90 bp | AGAGAGCGGGGCGAGGGTCCGGGTCTCCGGGGTCCTTCTTGCAGCAGCGCTGGCCAGCCCCAGGATGGCTaGGCCCACGTCCTTGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: RERGEGPGLRGPSCSSAGQPQDG*AHVLGG Trigger: CCCTCCAAGGACGTGGGCGCAGCCATCCTGGGGCTG...GCCAGCGCTGCTGCAAGAAGGACCCCGGAGACCCGGACCCTCGCCCCGCTCTCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS-3UTR CCA 90 bp | GGACAGAGCCGGGCGTCCAAGTCCCTTCCCGCGCCCCCGCCGACAGTCTCGCCGAGTACAGCCCCAGGATaGCTGCGCCCACGTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: GQSRASKSLPAPPPTVSPSTAPG*LRPRPW Trigger: CCAAGGACGTGGGCGCAGCCATCCTGGGGCTGTACT...CGGCGAGACTGTCGGCGGGGGCGCGGGAAGGGACTTGGACGCCCGGCTCTGTCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS-3UTR CCA 90 bp | ACCCCACATTCTCCCACCCCGCAACGCTGCAGCGCACACAGGACAGAGCCGGGCACGAAGGCGGGAGGCTaGCTGCCTGCGCGCTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: TPHSPTPQRCSAHRTEPGTKAGG*LPARSR Trigger: CCGAGAGCGCGCAGGCAGCCAGCCTCCCGCCTTCGT...GCCCGGCTCTGTCCTGTGTGCGCTGCAGCGTTGCGGGGTGGGAGAATGTGGGGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS-3UTR CCA 90 bp | CCACCCCGCAACGCTGCAGCGCACACAGGACAGAGCCGGGCGTCCAAGTCCCTTCAGCGGTGCGCCCCCTaGACAGCAGCCCAGCCACGT | + |
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Preference number: 4 (lower is better) Translates to: PPRNAAAHTGQSRASKSLQRCAP*TAAQPR Trigger: ACGTGGCTGGGCTGCTGTCCAGGGGGCGCACCGCTG...AAGGGACTTGGACGCCCGGCTCTGTCCTGTGTGCGCTGCAGCGTTGCGGGGTGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS-3UTR GCA 90 bp | GGGCGAGGGTCCGGGTCTCCGGGGTCCTTCTTGCAGCAGCGCTGGCGAGGGCGGGAGGGCCGGCGCTCCTaGACCAGAAAGTTGATCATG | + |
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Preference number: 4 (lower is better) Translates to: GRGSGSPGSFLQQRWRGREGRRS*TRKLIM Trigger: CATGATCAACTTTCTGGTGCAGGAGCGCCGGCCCTC...CCGCCCTCGCCAGCGCTGCTGCAAGAAGGACCCCGGAGACCCGGACCCTCGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS-3UTR GCA 90 bp | ACCCACCCGCACCAACGTACACACAAAACTCCCACGCGAGCGACCGCAGTCCCATGCCCAGCCCGTGGGTaGGGTTTCCCAGGGCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: THPHQRTHKTPTRATAVPCPARG*GFPGRP Trigger: GGGCCGCCCTGGGAAACCGCACCCACGGGCTGGGCA...TGGGACTGCGGTCGCTCGCGTGGGAGTTTTGTGTGTACGTTGGTGCGGGTGGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS-3UTR CCA 90 bp | ACCCCACATTCTCCCACCCCGCAACGCTGCAGCGCACACAGGACAGAGCCGGGCGAGGGCGGACCCAGATaGCGCTCAGTACAGCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: TPHSPTPQRCSAHRTEPGEGGPR*RSVQPQ Trigger: CTGGGGCTGTACTGAGCGCCATCTGGGTCCGCCCTC...GCCCGGCTCTGTCCTGTGTGCGCTGCAGCGTTGCGGGGTGGGAGAATGTGGGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS-3UTR CCA 90 bp | TTCCGAACCCACCCGCACCAACGTACACACAAAACTCCCACGCGAGCGACCGCACAGTCCCGGGTGCACTaGGCTGCTCGCCGGGGTCCG | + |
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Preference number: 4 (lower is better) Translates to: FRTHPHQRTHKTPTRATAQSRVH*AARRGP Trigger: CGGACCCCGGCGAGCAGCCCAGTGCACCCGGGACTG...TGCGGTCGCTCGCGTGGGAGTTTTGTGTGTACGTTGGTGCGGGTGGGTTCGGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS-3UTR GCA 90 bp | GAGAGCGGGGCGAGGGTCCGGGTCTCCGGGGTCCTTCTTGCAGCAGCGCTGGCGACCGCAGTCCCAAATTaGATCTCCATACCCACTCCC | + |
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Preference number: 4 (lower is better) Translates to: ESGARVRVSGVLLAAALATAVPN*ISIPTP Trigger: GGGAGTGGGTATGGAGATGCAATTTGGGACTGCGGT...CGCCAGCGCTGCTGCAAGAAGGACCCCGGAGACCCGGACCCTCGCCCCGCTCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS-3UTR GCA 90 bp | CCCACTCGCACCGTGTTCCGAACCCACCCGCACCAACGTACACACAAAACTCCCCAGAGCACGGCGATCTaGGCCACCCGCGACACCCAC | + |
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Preference number: 4 (lower is better) Translates to: PTRTVFRTHPHQRTHKTPQSTAI*ATRDTH Trigger: GTGGGTGTCGCGGGTGGCGCAGATCGCCGTGCTCTG...GGGAGTTTTGTGTGTACGTTGGTGCGGGTGGGTTCGGAACACGGTGCGAGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS-3UTR GCA 90 bp | CCCACCCGCACCAACGTACACACAAAACTCCCACGCGAGCGACCGCAGTCCCAACCCACCCCGCAACGCTaGAGCGCACACAGGACAGAG | + |
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Preference number: 4 (lower is better) Translates to: PTRTNVHTKLPRERPQSQPTPQR*SAHRTE Trigger: CTCTGTCCTGTGTGCGCTGCAGCGTTGCGGGGTGGG...TTGGGACTGCGGTCGCTCGCGTGGGAGTTTTGTGTGTACGTTGGTGCGGGTGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS-3UTR CCA 90 bp | CACTCGCACCGTGTTCCGAACCCACCCGCACCAACGTACACACAAAACTCCCACCTGCGCCCACGTCCTTaGAGGGCCGGCGCTCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: HSHRVPNPPAPTYTQNSHLRPRP*RAGAPA Trigger: TGCAGGAGCGCCGGCCCTCCAAGGACGTGGGCGCAG...GTGGGAGTTTTGTGTGTACGTTGGTGCGGGTGGGTTCGGAACACGGTGCGAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS-3UTR CCA 90 bp | CGTGTTCCGAACCCACCCGCACCAACGTACACACAAAACTCCCACGCGAGCGACTCCTCCAAGCCGCTGTaGTTCAGGAAGGTCGCGTTC | + |
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Preference number: 4 (lower is better) Translates to: RVPNPPAPTYTQNSHASDSSKPL*FRKVAF Trigger: GAACGCGACCTTCCTGAACCACAGCGGCTTGGAGGA...GTCGCTCGCGTGGGAGTTTTGTGTGTACGTTGGTGCGGGTGGGTTCGGAACACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| 3UTR CAA 72 bp | ACACAAAACTCCCACGCGAGCGACCGCAGTCCCAAATaGCATCTCCATACCCACTCCCACCCTGCCCCGAAC | + |
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Preference number: 4 (lower is better) Translates to: TQNSHASDRSPK*HLHTHSHPAPN Trigger: GTTCGGGGCAGGGTGGGAGTGGGTATGGAGATGCAATTTGGGACTGCGGTCGCTCGCGTGGGAGTTTTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS-3UTR GCA 90 bp | AGAGAGCGGGGCGAGGGTCCGGGTCTCCGGGGTCCTTCTTGCAGCAGCGCTGGCCTGAAGCCCTACGGCTaGAGTTTTATTACAAGATTT | + |
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Preference number: 4 (lower is better) Translates to: RERGEGPGLRGPSCSSAGLKPYG*SFITRF Trigger: AAATCTTGTAATAAAACTGCAGCCGTAGGGCTTCAG...GCCAGCGCTGCTGCAAGAAGGACCCCGGAGACCCGGACCCTCGCCCCGCTCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS-3UTR TCA 90 bp | CTTCACATCTTCACCCACTCGCACCGTGTTCCGAACCCACCCGCACCAACGTACCAAGCTCAGCGACTCTaGCGCTTCACATCTTCACCC | + |
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Preference number: 4 (lower is better) Translates to: LHIFTHSHRVPNPPAPTYQAQRL*RFTSSP Trigger: GGGTGAAGATGTGAAGCGTCAGAGTCGCTGAGCTTG...GTACGTTGGTGCGGGTGGGTTCGGAACACGGTGCGAGTGGGTGAAGATGTGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS-3UTR GCA 90 bp | AGCTGCCTGAAGCCCTACGGCTGCAGTTTTATTACAAGATTTCTTTCCAAACGCCCTCGGACCGGCTCCTaGGGTACGGGGAGGGGACGA | + |
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Preference number: 4 (lower is better) Translates to: SCLKPYGCSFITRFLSKRPRTGS*GTGRGR Trigger: TCGTCCCCTCCCCGTACCGCAGGAGCCGGTCCGAGG...GCGTTTGGAAAGAAATCTTGTAATAAAACTGCAGCCGTAGGGCTTCAGGCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS-3UTR CCA 90 bp | TCCAAACGCAAGATCAGGCCAACAAGCTCAGCGACTCTGACGCTTCACATCTTCTTCTTGCAGCAGCGCTaGCGAGGGCGGACCCAGATG | + |
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Preference number: 4 (lower is better) Translates to: SKRKIRPTSSATLTLHIFFLQQR*RGRTQM Trigger: CATCTGGGTCCGCCCTCGCCAGCGCTGCTGCAAGAA...GAAGATGTGAAGCGTCAGAGTCGCTGAGCTTGTTGGCCTGATCTTGCGTTTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS GCA 90 bp | GAGCGCAGAGAGCGGGGCGAGGGTCCGGGTCTCCGGGGTCCTTCTTaGAGCAGCGCTGGCGAGGGCGGACCCAGATGGCGCTCAGTACAG | + |
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Preference number: 5 (lower is better) Translates to: ERRERGEGPGLRGPS*SSAGEGGPRWRSVQ Trigger: CTGTACTGAGCGCCATCTGGGTCCGCCCTCGCCAGCGCTGCTGCAAGAAGGACCCCGGAGACCCGGACCCTCGCCCCGCTCTCTGCGCTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS-3UTR CAA 90 bp | GGGTCTCCGGGGTCCTTCTTGCAGCAGCGCTGGCGAGGGCGGACCCAGATGGCGTCTCCGGGGTCCTTCTaGCAGCAGCGCTGGCGAGGG | + |
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Preference number: 5 (lower is better) Translates to: GSPGSFLQQRWRGRTQMASPGSF*QQRWRG Trigger: CCCTCGCCAGCGCTGCTGCAAGAAGGACCCCGGAGA...CGCCATCTGGGTCCGCCCTCGCCAGCGCTGCTGCAAGAAGGACCCCGGAGACCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS GCA 90 bp | GGCGAGGGCGGACCCAGATGGCGCTCAGTACAGCCCCAGGATGGCTaGGCCCACGTCCTTGGAGGGCCGGCGCTCCTGCACCAGAAAGTT | + |
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Preference number: 5 (lower is better) Translates to: GEGGPRWRSVQPQDG*AHVLGGPALLHQKV Trigger: AACTTTCTGGTGCAGGAGCGCCGGCCCTCCAAGGACGTGGGCGCAGCCATCCTGGGGCTGTACTGAGCGCCATCTGGGTCCGCCCTCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS CCA 90 bp | CTCCGGGGTCCTTCTTGCAGCAGCGCTGGCGAGGGCGGACCCAGATaGCGCTCAGTACAGCCCCAGGATGGCTGCGCCCACGTCCTTGGA | + |
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Preference number: 5 (lower is better) Translates to: LRGPSCSSAGEGGPR*RSVQPQDGCAHVLG Trigger: TCCAAGGACGTGGGCGCAGCCATCCTGGGGCTGTACTGAGCGCCATCTGGGTCCGCCCTCGCCAGCGCTGCTGCAAGAAGGACCCCGGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS-3UTR CAA 90 bp | CCGAACCCACCCGCACCAACGTACACACAAAACTCCCACGCGAGCGACCGCAGTGCTGCGCCCACGTCCTaGGAGGGCCGGCGCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: PNPPAPTYTQNSHASDRSAAPTS*EGRRSC Trigger: GCAGGAGCGCCGGCCCTCCAAGGACGTGGGCGCAGC...ACTGCGGTCGCTCGCGTGGGAGTTTTGTGTGTACGTTGGTGCGGGTGGGTTCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS-3UTR CAA 90 bp | AGAGAGCGGGGCGAGGGTCCGGGTCTCCGGGGTCCTTCTTGCAGCAGCGCTGGCGACCGCAGTCCCAAATaGCATCTCCATACCCACTCC | + |
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Preference number: 5 (lower is better) Translates to: RERGEGPGLRGPSCSSAGDRSPK*HLHTHS Trigger: GGAGTGGGTATGGAGATGCAATTTGGGACTGCGGTC...GCCAGCGCTGCTGCAAGAAGGACCCCGGAGACCCGGACCCTCGCCCCGCTCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS-3UTR CAA 90 bp | TCCAAACGCAAGATCAGGCCAACAAGCTCAGCGACTCTGACGCTTCACATCTTCTCCTGCACCAGAAAGTaGATCATGCTCTCGGACTTG | + |
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Preference number: 5 (lower is better) Translates to: SKRKIRPTSSATLTLHIFSCTRK*IMLSDL Trigger: CAAGTCCGAGAGCATGATCAACTTTCTGGTGCAGGA...GAAGATGTGAAGCGTCAGAGTCGCTGAGCTTGTTGGCCTGATCTTGCGTTTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS-3UTR CAA 90 bp | AGCTGCCTGAAGCCCTACGGCTGCAGTTTTATTACAAGATTTCTTTCCAAACGCATCATGCTCTCGGACTaGATGAGCAGGTTGCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: SCLKPYGCSFITRFLSKRIMLSD*MSRLQP Trigger: GGGCTGCAACCTGCTCATCAAGTCCGAGAGCATGAT...GCGTTTGGAAAGAAATCTTGTAATAAAACTGCAGCCGTAGGGCTTCAGGCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS GCA 72 bp | CGGGGGTCTCGGCGCGCAGTCCCGGGTGCACTGGGCTaGTCGCCGGGGTCCGCGCTCTCAGGGACGCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: RGSRRAVPGALG*SPGSALSGTLR Trigger: CCGGAGCGTCCCTGAGAGCGCGGACCCCGGCGAGCAGCCCAGTGCACCCGGGACTGCGCGCCGAGACCCCCG 79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS GCA 72 bp | CCAGCGGTGCGCCCCCTGGACAGCAGCCCAGCCACGTaGCCAGCCCGTGGGTGCGGTTTCCCAGGGCGGCCC | + |
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Preference number: 6 (lower is better) Translates to: PAVRPLDSSPAT*PARGCGFPGRP Trigger: GGGCCGCCCTGGGAAACCGCACCCACGGGCTGGGCACGTGGCTGGGCTGCTGTCCAGGGGGCGCACCGCTGG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS CCA 72 bp | GGGCGGACCCAGATGGCGCTCAGTACAGCCCCAGGATaGCTGCGCCCACGTCCTTGGAGGGCCGGCGCTCCT | + |
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Preference number: 6 (lower is better) Translates to: GRTQMALSTAPG*LRPRPWRAGAP Trigger: AGGAGCGCCGGCCCTCCAAGGACGTGGGCGCAGCCATCCTGGGGCTGTACTGAGCGCCATCTGGGTCCGCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS GCA 72 bp | GGACCCAGATGGCGCTCAGTACAGCCCCAGGATGGCTaGGCCCACGTCCTTGGAGGGCCGGCGCTCCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: GPRWRSVQPQDG*AHVLGGPALLH Trigger: GTGCAGGAGCGCCGGCCCTCCAAGGACGTGGGCGCAGCCATCCTGGGGCTGTACTGAGCGCCATCTGGGTCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS CCA 72 bp | GGGTCCGGGTCTCCGGGGTCCTTCTTGCAGCAGCGCTaGCGAGGGCGGACCCAGATGGCGCTCAGTACAGCC | + |
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Preference number: 6 (lower is better) Translates to: GSGSPGSFLQQR*RGRTQMALSTA Trigger: GGCTGTACTGAGCGCCATCTGGGTCCGCCCTCGCCAGCGCTGCTGCAAGAAGGACCCCGGAGACCCGGACCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS CAA 90 bp | AGAGCGCAGAGAGCGGGGCGAGGGTCCGGGTCTCCGGGGTCCTTCTaGCAGCAGCGCTGGCGAGGGCGGACCCAGATGGCGCTCAGTACA | + |
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Preference number: 6 (lower is better) Translates to: RAQRAGRGSGSPGSF*QQRWRGRTQMALST Trigger: TGTACTGAGCGCCATCTGGGTCCGCCCTCGCCAGCGCTGCTGCAAGAAGGACCCCGGAGACCCGGACCCTCGCCCCGCTCTCTGCGCTCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS GCA 72 bp | ACCACGGTAAGCGACAGCACGCAGAGCACGGCGATCTaGGCCACCCGCGACACCCACAGGCTGCGCTCGTCG | + |
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Preference number: 6 (lower is better) Translates to: TTVSDSTQSTAI*ATRDTHRLRSS Trigger: CGACGAGCGCAGCCTGTGGGTGTCGCGGGTGGCGCAGATCGCCGTGCTCTGCGTGCTGTCGCTTACCGTGGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS CCA 72 bp | CCTTCTTGCAGCAGCGCTGGCGAGGGCGGACCCAGATaGCGCTCAGTACAGCCCCAGGATGGCTGCGCCCAC | + |
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Preference number: 6 (lower is better) Translates to: PSCSSAGEGGPR*RSVQPQDGCAH Trigger: GTGGGCGCAGCCATCCTGGGGCTGTACTGAGCGCCATCTGGGTCCGCCCTCGCCAGCGCTGCTGCAAGAAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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| CDS CAA 72 bp | GCTCAGTACAGCCCCAGGATGGCTGCGCCCACGTCCTaGGAGGGCCGGCGCTCCTGCACCAGAAAGTTGATC | + |
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Preference number: 6 (lower is better) Translates to: AQYSPRMAAPTS*EGRRSCTRKLI Trigger: GATCAACTTTCTGGTGCAGGAGCGCCGGCCCTCCAAGGACGTGGGCGCAGCCATCCTGGGGCTGTACTGAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000322329.5 |
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