Pregenerated sensors for RPPH1 (Homo sapiens)

Ensembl gene IDs: ENSG00000277209

Ensembl transcript IDs: ENST00000516869.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	ACGGCATCTCCTGCCCAGTCTGACCTCGCGCGGAGCCCCGTTCTCTaGGAACTCACCTCCCCGAAGCTCAGGGAGAGCCCTGTTAGGGCC	+
Preference number: 5 (lower is better) Translates to: TASPAQSDLARSPVL*ELTSPKLRESPVRA Trigger: GGCCCTAACAGGGCTCTCCCTGAGCTTCGGGGAGGTGAGTTCCCAGAGAACGGGGCTCCGCGCGAGGTCAGACTGGGCAGGAGATGCCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000516869.1
CDS TCA 90 bp	CTGCGGGGTACCTCACCTCAGCCATTGAACTCACTTCGCTGGCCGTaGGTCTGTTCCAAGCTCCGGCAAAGGAGGCATCCGCCGGGCCCC	+
Preference number: 5 (lower is better) Translates to: LRGTSPQPLNSLRWP*VCSKLRQRRHPPGP Trigger: GGGGCCCGGCGGATGCCTCCTTTGCCGGAGCTTGGAACAGACTCACGGCCAGCGAAGTGAGTTCAATGGCTGAGGTGAGGTACCCCGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000516869.1
CDS TCA 72 bp	CCGAAGGGCGGGGTCCACGGCATCTCCTGCCCAGTCTaGCCTCGCGCGGAGCCCCGTTCTCTGGGAACTCAC	+
Preference number: 6 (lower is better) Translates to: PKGGVHGISCPV*PRAEPRSLGTH Trigger: GTGAGTTCCCAGAGAACGGGGCTCCGCGCGAGGTCAGACTGGGCAGGAGATGCCGTGGACCCCGCCCTTCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000516869.1
CDS CCA 72 bp	CCTGCCCAGTCTGACCTCGCGCGGAGCCCCGTTCTCTaGGAACTCACCTCCCCGAAGCTCAGGGAGAGCCCT	+
Preference number: 6 (lower is better) Translates to: PAQSDLARSPVL*ELTSPKLRESP Trigger: AGGGCTCTCCCTGAGCTTCGGGGAGGTGAGTTCCCAGAGAACGGGGCTCCGCGCGAGGTCAGACTGGGCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000516869.1
CDS TCA 72 bp	ACCTCACCTCAGCCATTGAACTCACTTCGCTGGCCGTaGGTCTGTTCCAAGCTCCGGCAAAGGAGGCATCCG	+
Preference number: 6 (lower is better) Translates to: TSPQPLNSLRWP*VCSKLRQRRHP Trigger: CGGATGCCTCCTTTGCCGGAGCTTGGAACAGACTCACGGCCAGCGAAGTGAGTTCAATGGCTGAGGTGAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000516869.1
CDS TCA 72 bp	TATGAGGTCCCCTGCGGGGTACCTCACCTCAGCCATTaGACTCACTTCGCTGGCCGTGAGTCTGTTCCAAGC	+
Preference number: 6 (lower is better) Translates to: YEVPCGVPHLSH*THFAGRESVPS Trigger: GCTTGGAACAGACTCACGGCCAGCGAAGTGAGTTCAATGGCTGAGGTGAGGTACCCCGCAGGGGACCTCATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000516869.1

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