Pregenerated sensors for RPP38-DT (Homo sapiens)

Ensembl gene IDs: ENSG00000176236

Ensembl transcript IDs: ENST00000624760.1

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	CCGCTTTCCCCTCTCCGGAGTGACCTAACACAGGATAACGAAACCTaGACTGCTCCGAGCGCTTCCTCCCCGGCCCGTCGCGTCTGCGAG	+
Preference number: 5 (lower is better) Translates to: PLSPLRSDLTQDNET*TAPSASSPARRVCE Trigger: CTCGCAGACGCGACGGGCCGGGGAGGAAGCGCTCGGAGCAGTGCAGGTTTCGTTATCCTGTGTTAGGTCACTCCGGAGAGGGGAAAGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000624760.1
CDS TCA 90 bp	GCTTCATCACTTGTCCCCGACTTTGCAGCGACTCCGATGGTAGCCTaGGTCTCCATTGCTTGGAGCAGCCACAGTGGACACTGGACGGGA	+
Preference number: 5 (lower is better) Translates to: ASSLVPDFAATPMVA*VSIAWSSHSGHWTG Trigger: TCCCGTCCAGTGTCCACTGTGGCTGCTCCAAGCAATGGAGACTCAGGCTACCATCGGAGTCGCTGCAAAGTCGGGGACAAGTGATGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000624760.1
CDS CCA 90 bp	GACTCCGATGGTAGCCTGAGTCTCCATTGCTTGGAGCAGCCACAGTaGACACTGGACGGGATATTCTGTGCAGCTGTTGCTGAACTCAAG	+
Preference number: 5 (lower is better) Translates to: DSDGSLSLHCLEQPQ*TLDGIFCAAVAELK Trigger: CTTGAGTTCAGCAACAGCTGCACAGAATATCCCGTCCAGTGTCCACTGTGGCTGCTCCAAGCAATGGAGACTCAGGCTACCATCGGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624760.1
CDS GCA 90 bp	AGCTTTAAAATGTTATTCGGCCGCTTCATCACTTGTCCCCGACTTTaGAGCGACTCCGATGGTAGCCTGAGTCTCCATTGCTTGGAGCAG	+
Preference number: 5 (lower is better) Translates to: SFKMLFGRFITCPRL*SDSDGSLSLHCLEQ Trigger: CTGCTCCAAGCAATGGAGACTCAGGCTACCATCGGAGTCGCTGCAAAGTCGGGGACAAGTGATGAAGCGGCCGAATAACATTTTAAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000624760.1
CDS CCA 72 bp	GGGATTCCATGGCGACGGGCTCACTGGGACAGGGGCTaGGGTTGTGCGTCCCTCGCGCCTGCGCACTGCCCC	+
Preference number: 6 (lower is better) Translates to: GIPWRRAHWDRG*GCASLAPAHCP Trigger: GGGGCAGTGCGCAGGCGCGAGGGACGCACAACCCCAGCCCCTGTCCCAGTGAGCCCGTCGCCATGGAATCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000624760.1
CDS GCA 72 bp	CCTCTCCGGAGTGACCTAACACAGGATAACGAAACCTaGACTGCTCCGAGCGCTTCCTCCCCGGCCCGTCGC	+
Preference number: 6 (lower is better) Translates to: PLRSDLTQDNET*TAPSASSPARR Trigger: GCGACGGGCCGGGGAGGAAGCGCTCGGAGCAGTGCAGGTTTCGTTATCCTGTGTTAGGTCACTCCGGAGAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000624760.1
CDS CAA 72 bp	CGGGGCCTAAACTCGAGTCTAAAAGATTGGGCCTCGTaGTGTCGTTTCCGGGTCGCGCGACGCTGTGGGCCG	+
Preference number: 6 (lower is better) Translates to: RGLNSSLKDWAS*CRFRVARRCGP Trigger: CGGCCCACAGCGTCGCGCGACCCGGAAACGACACAACGAGGCCCAATCTTTTAGACTCGAGTTTAGGCCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000624760.1
CDS TCA 72 bp	CTTGTCCCCGACTTTGCAGCGACTCCGATGGTAGCCTaGGTCTCCATTGCTTGGAGCAGCCACAGTGGACAC	+
Preference number: 6 (lower is better) Translates to: LVPDFAATPMVA*VSIAWSSHSGH Trigger: GTGTCCACTGTGGCTGCTCCAAGCAATGGAGACTCAGGCTACCATCGGAGTCGCTGCAAAGTCGGGGACAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000624760.1
CDS GCA 72 bp	CTTTGCAGCGACTCCGATGGTAGCCTGAGTCTCCATTaGTTGGAGCAGCCACAGTGGACACTGGACGGGATA	+
Preference number: 6 (lower is better) Translates to: LCSDSDGSLSLH*LEQPQWTLDGI Trigger: TATCCCGTCCAGTGTCCACTGTGGCTGCTCCAAGCAATGGAGACTCAGGCTACCATCGGAGTCGCTGCAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624760.1
CDS CAA 72 bp	TGCAGCGACTCCGATGGTAGCCTGAGTCTCCATTGCTaGGAGCAGCCACAGTGGACACTGGACGGGATATTC	+
Preference number: 6 (lower is better) Translates to: CSDSDGSLSLHC*EQPQWTLDGIF Trigger: GAATATCCCGTCCAGTGTCCACTGTGGCTGCTCCAAGCAATGGAGACTCAGGCTACCATCGGAGTCGCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624760.1
CDS CCA 72 bp	GGTAGCCTGAGTCTCCATTGCTTGGAGCAGCCACAGTaGACACTGGACGGGATATTCTGTGCAGCTGTTGCT	+
Preference number: 6 (lower is better) Translates to: GSLSLHCLEQPQ*TLDGIFCAAVA Trigger: AGCAACAGCTGCACAGAATATCCCGTCCAGTGTCCACTGTGGCTGCTCCAAGCAATGGAGACTCAGGCTACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624760.1
CDS GCA 72 bp	ATGTTATTCGGCCGCTTCATCACTTGTCCCCGACTTTaGAGCGACTCCGATGGTAGCCTGAGTCTCCATTGC	+
Preference number: 6 (lower is better) Translates to: MLFGRFITCPRL*SDSDGSLSLHC Trigger: GCAATGGAGACTCAGGCTACCATCGGAGTCGCTGCAAAGTCGGGGACAAGTGATGAAGCGGCCGAATAACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000624760.1
CDS TCA 72 bp	GTGGACACTGGACGGGATATTCTGTGCAGCTGTTGCTaGACTCAAGGCAACTCTTACTGCCTTTCTCTTTTC	+
Preference number: 6 (lower is better) Translates to: VDTGRDILCSCC*TQGNSYCLSLF Trigger: GAAAAGAGAAAGGCAGTAAGAGTTGCCTTGAGTTCAGCAACAGCTGCACAGAATATCCCGTCCAGTGTCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000624760.1
CDS CAA 72 bp	CCTGTGTCTCTATTTGTCTTTGGAAATGCAAGCTGCTaGCAGTTCATCATAGCTAACTCACACAATTCATTT	+
Preference number: 6 (lower is better) Translates to: PVSLFVFGNASC*QFIIANSHNSF Trigger: AAATGAATTGTGTGAGTTAGCTATGATGAACTGCAAGCAGCTTGCATTTCCAAAGACAAATAGAGACACAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624760.1
CDS CAA 72 bp	TACTTTAGCATTTTAATTAGATTCCTGTGTCTCTATTaGTCTTTGGAAATGCAAGCTGCTTGCAGTTCATCA	+
Preference number: 6 (lower is better) Translates to: YFSILIRFLCLY*SLEMQAACSSS Trigger: TGATGAACTGCAAGCAGCTTGCATTTCCAAAGACAAATAGAGACACAGGAATCTAATTAAAATGCTAAAGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000624760.1