Pregenerated sensors for RPP30 (Homo sapiens)
Ensembl gene IDs: ENSG00000148688Ensembl transcript IDs: ENST00000277882.7, ENST00000371703.8, ENST00000413330.5, ENST00000414836.1, ENST00000466462.5, ENST00000470933.1, ENST00000479678.1, ENST00000480406.6, ENST00000487998.5, ENST00000489806.5
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGGAATATGAGGTCAGGAGATTGAGACCATCCTGGCTAACACGGTaGAACCCCGTCTCTGCTAAATACATGGCGAGCGCCTGTAGTCCC | + |
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Preference number: 1 (lower is better) Translates to: VEYEVRRLRPSWLTR*NPVSAKYMASACSP Trigger: GGGACTACAGGCGCTCGCCATGTATTTAGCAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCAATCTCCTGACCTCATATTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371703.8 |
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| 3UTR TCA 72 bp | GAGGTCAGGAGATTGAGACCATCCTGGCTAACACGGTaGAACCCCGTCTCTGCTAAATACATGGCGAGCGCC | + |
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Preference number: 3 (lower is better) Translates to: EVRRLRPSWLTR*NPVSAKYMASA Trigger: GGCGCTCGCCATGTATTTAGCAGAGACGGGGTTTCACCGTGTTAGCCAGGATGGTCTCAATCTCCTGACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371703.8 |
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| CDS-3UTR CCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGAGCGCTGCTCGGCAGTTaGTGGACACCGCAGCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRALLGS*WTPQPW Trigger: CCAAGGCTGCGGTGTCCACCAACTGCCGAGCAGCGC...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000371703.8 ENST00000414836.1 |
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| CDS-3UTR CCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGACTGCTCGGCAGTTGGTaGACACCGCAGCCTTGGCGT | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRLLGSW*TPQPWR Trigger: ACGCCAAGGCTGCGGTGTCCACCAACTGCCGAGCAG...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000371703.8 ENST00000414836.1 |
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| CDS-3UTR GCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGACAGAGATCGAGCCACTaGACTCCAGCCTGGGGGACA | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRQRSSH*TPAWGT Trigger: TGTCCCCCAGGCTGGAGTGCAGTGGCTCGATCTCTG...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000371703.8 |
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| CDS-3UTR GCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGACCAGGAGGCGGAGCTTaGAGTGAGCAGAGATCGAGC | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRPGGGA*SEQRSS Trigger: GCTCGATCTCTGCTCACTGCAAGCTCCGCCTCCTGG...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371703.8 |
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| CDS-3UTR GCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGATCCATGGAGAAGCGCTaGTCGGCAGTTGGTGGACAC | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRSMEKR*SAVGGH Trigger: GTGTCCACCAACTGCCGAGCAGCGCTTCTCCATGGA...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000371703.8 ENST00000414836.1 |
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| CDS-3UTR CCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGATGGACACCGCAGCCTTaGCGTCACTTTCAGAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRWTPQP*RHFQRA Trigger: GGCTCTCTGAAAGTGACGCCAAGGCTGCGGTGTCCA...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000371703.8 ENST00000414836.1 |
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| CDS-3UTR TCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGAGGAAGAAGGGAGTGCTaGCAGAGACTGGGGCATTCT | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRGRREC*QRLGHS Trigger: AGAATGCCCCAGTCTCTGTCAGCACTCCCTTCTTCC...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000371703.8 ENST00000414836.1 |
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| CDS-3UTR CCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGAGCCAAAGCGGGAGGATaGCTTGATCCTAGGAGTTTG | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRAKAGG*LDPRSL Trigger: CAAACTCCTAGGATCAAGCCATCCTCCCGCTTTGGC...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371703.8 |
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| CDS-3UTR TCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGAATAGAGCCGGGCCCTTaGAGAAGTTGCTCTCAAAAC | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRIEPGP*RSCSQN Trigger: GTTTTGAGAGCAACTTCTTCAAGGGCCCGGCTCTAT...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000371703.8 ENST00000414836.1 |
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| CDS-3UTR TCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGAGGTTGCAGTGAGCTGTaGTTATGCCACTGTACTCCA | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRGCSEL*LCHCTP Trigger: TGGAGTACAGTGGCATAATCACAGCTCACTGCAACC...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371703.8 |
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| CDS-3UTR TCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGAGGATTGAGGTTGCAGTaGGCTGTGATTATGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRGLRLQ*AVIMPL Trigger: CAGTGGCATAATCACAGCTCACTGCAACCTCAATCC...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371703.8 |
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| CDS-3UTR GCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGATCGCAGGTCCAAATCTaGAAACACCGCCATGCTGAA | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRSQVQI*KHRHAE Trigger: TTCAGCATGGCGGTGTTTGCAGATTTGGACCTGCGA...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371703.8 |
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| CDS-3UTR CCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGAAGTGCTGACAGAGACTaGGGCATTCTTTTCAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRSADRD*GILFSP Trigger: AGGGCTGAAAAGAATGCCCCAGTCTCTGTCAGCACT...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000371703.8 ENST00000414836.1 |
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| CDS-3UTR TCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGAATTGATAGCAACAACTaGATAGCCAAGGTGAGCGGC | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRIDSNN*IAKVSG Trigger: GCCGCTCACCTTGGCTATTCAGTTGTTGCTATCAAT...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371703.8 |
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| CDS-3UTR TCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGAATCTTCATCTCCTTCTaGTGGCCGAGGTTTCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRIFISF*WPRFLH Trigger: GTGAAGAAACCTCGGCCATCAGAAGGAGATGAAGAT...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000371703.8 ENST00000414836.1 |
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| CDS-3UTR TCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGATTGATCCTAGGAGTTTaGGACCAGCCTCAGCAACAT | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRLILGV*DQPQQH Trigger: ATGTTGCTGAGGCTGGTCTCAAACTCCTAGGATCAA...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371703.8 |
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| CDS-3UTR TCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGAGTAGGCATGAAGCAGTaGAGGAAGAGACCAGATGTA | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRVGMKQ*RKRPDV Trigger: TACATCTGGTCTCTTCCTTCACTGCTTCATGCCTAC...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371703.8 |
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| CDS-3UTR TCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGACTCAAAACATTGCAGTaGGATGGATCCGAGACAATA | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRLKTLQ*DGSETI Trigger: TATTGTCTCGGATCCATCTCACTGCAATGTTTTGAG...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000371703.8 ENST00000414836.1 |
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| CDS-3UTR GCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGATTGCTCTCAAAACATTaGAGTGAGATGGATCCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRLLSKH*SEMDPR Trigger: TCTCGGATCCATCTCACTGCAATGTTTTGAGAGCAA...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000371703.8 ENST00000414836.1 |
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| CDS-3UTR CCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGACACACTTGGCTTTCTTaGAAGCTGGAAGACAATCTT | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRHTWLS*KLEDNL Trigger: AAGATTGTCTTCCAGCTTCCAAGAAAGCCAAGTGTG...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000371703.8 ENST00000414836.1 |
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| CDS-3UTR TCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGACAATTGGCAAAGTTGTaGAGAGTTCAGAAACAGCTA | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRQLAKL*RVQKQL Trigger: TAGCTGTTTCTGAACTCTTCACAACTTTGCCAATTG...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000371703.8 ENST00000414836.1 |
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| CDS-3UTR GCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGATGTCTTTGGAAAAACTaGAACAACATCATAGAGCCG | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRCLWKN*NNIIEP Trigger: CGGCTCTATGATGTTGTTGCAGTTTTTCCAAAGACA...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000371703.8 ENST00000414836.1 |
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| CDS-3UTR GCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGATTTCCTTTGCAGATTTaGATCAAATTGAGGGCACTG | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRFPLQI*IKLRAL Trigger: CAGTGCCCTCAATTTGATGCAAATCTGCAAAGGAAA...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000371703.8 ENST00000414836.1 |
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| CDS-3UTR CCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGAAAATATTCAAACATCTaGCTGCATGTGGTGGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRKYSNI*LHVVAH Trigger: ATGAGCCACCACATGCAGCCAGATGTTTGAATATTT...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000371703.8 |
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| CDS-3UTR TCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGAAGATTTGCATCAAATTaGGGGCACTGGAAATTGTAT | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRRFASN*GHWKLY Trigger: ATACAATTTCCAGTGCCCTCAATTTGATGCAAATCT...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000371703.8 ENST00000414836.1 |
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| CDS-3UTR CCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGATTTTCCCTGTACAATTaGCAAAGTTGTGAAGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRFSLYN*QSCEEF Trigger: GAACTCTTCACAACTTTGCCAATTGTACAGGGAAAA...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000371703.8 ENST00000414836.1 |
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| CDS-3UTR CCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGAAACATTGCAGTGAGATaGATCCGAGACAATAATTGT | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRNIAVR*IRDNNC Trigger: ACAATTATTGTCTCGGATCCATCTCACTGCAATGTT...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000371703.8 ENST00000414836.1 |
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| CDS-3UTR CCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGAAATTATTTCCAAAGTTaGTTCAGTCCGATGCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRNYFQS*FSPMLC Trigger: GCAAAGCATCGGACTGAACCAACTTTGGAAATAATT...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371703.8 |
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| CDS-3UTR GCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGACCACATCTAAATGTGTaGAAGCAATATGAAAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRPHLNV*KQYEKA Trigger: AGCTTTTTCATATTGCTTGCACACATTTAGATGTGG...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000371703.8 ENST00000414836.1 |
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| CDS-3UTR GCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGATCTCTGTTACAGTTATaGAGACTAAATCCACATCTA | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRSLLQL*RLNPHL Trigger: TAGATGTGGATTTAGTCTGCATAACTGTAACAGAGA...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000371703.8 ENST00000414836.1 |
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| CDS-3UTR GCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGAAGCCTTTTAAAAAGATaGTTCACTAGGTTTCGTTTG | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRSLLKR*FTRFRL Trigger: CAAACGAAACCTAGTGAAGCATCTTTTTAAAAGGCT...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000371703.8 |
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| CDS-3UTR GCA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGAGTTGGTTCAGTCCGATaGTTTGCTATTTTTAATACA | + |
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Preference number: 4 (lower is better) Translates to: LFLLWLMNYKREEGSADRVGSVR*FAIFNT Trigger: TGTATTAAAAATAGCAAAGCATCGGACTGAACCAAC...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000371703.8 |
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| CDS TCA 90 bp | GGGTGGCATGAGGTTGGCCAGGCGCGAAGCCGGGGCAACTCACGGTaGGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTCAGGTCAGAA | + |
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Preference number: 5 (lower is better) Translates to: GWHEVGQARSRGNSR*AAVSTSPRRAFRSE Trigger: TTCTGACCTGAAGGCTCTGCGCGGACTTGTGGAGACAGCCGCTCACCGTGAGTTGCCCCGGCTTCGCGCCTGGCCAACCTCATGCCACCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000277882.7 |
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| CDS CCA 90 bp | CTCCATGGAGAAGCGCTGCTCGGCAGTTGGTGGACACCGCAGCCTTaGCGTCACTTTCAGAGAGCCCAAACAGCAAGCCTAGATTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: LHGEALLGSWWTPQP*RHFQRAQTASLDLP Trigger: TGGCAAATCTAGGCTTGCTGTTTGGGCTCTCTGAAAGTGACGCCAAGGCTGCGGTGTCCACCAACTGCCGAGCAGCGCTTCTCCATGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000277882.7 ENST00000371703.8 ENST00000413330.5 ENST00000414836.1 ENST00000479678.1 ENST00000480406.6 ENST00000487998.5 ENST00000489806.5 |
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| CDS CCA 90 bp | CCACCGAGGCCAGTGGGCCAGGCTGTAATGTCCTGCATCAGTCACTaGCCATGGGCCAACCTCAGAGGAGACAAAACTTCCCAGGTATCT | + |
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Preference number: 5 (lower is better) Translates to: PPRPVGQAVMSCISH*PWANLRGDKTSQVS Trigger: AGATACCTGGGAAGTTTTGTCTCCTCTGAGGTTGGCCCATGGCCAGTGACTGATGCAGGACATTACAGCCTGGCCCACTGGCCTCGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000480406.6 ENST00000489806.5 |
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| CDS CCA 90 bp | GACAGAGACTGGGGCATTCTTTTCAGCCCTCACACTTGGCTTTCTTaGAAGCTGGAAGACAATCTTCATCTCCTTCTGATGGCCGAGGTT | + |
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Preference number: 5 (lower is better) Translates to: DRDWGILFSPHTWLS*KLEDNLHLLLMAEV Trigger: AACCTCGGCCATCAGAAGGAGATGAAGATTGTCTTCCAGCTTCCAAGAAAGCCAAGTGTGAGGGCTGAAAAGAATGCCCCAGTCTCTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000371703.8 ENST00000414836.1 ENST00000466462.5 ENST00000479678.1 ENST00000487998.5 |
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| CDS CCA 90 bp | GGGAGTGCTGACAGAGACTGGGGCATTCTTTTCAGCCCTCACACTTaGCTTTCTTGGAAGCTGGAAGACAATCTTCATCTCCTTCTGATG | + |
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Preference number: 5 (lower is better) Translates to: GSADRDWGILFSPHT*LSWKLEDNLHLLLM Trigger: CATCAGAAGGAGATGAAGATTGTCTTCCAGCTTCCAAGAAAGCCAAGTGTGAGGGCTGAAAAGAATGCCCCAGTCTCTGTCAGCACTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000371703.8 ENST00000414836.1 ENST00000466462.5 ENST00000479678.1 ENST00000487998.5 |
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| CDS-3UTR CAA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGAAGCGCTGCTCGGCAGTaGGTGGACACCGCAGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: LFLLWLMNYKREEGSADRSAARQ*VDTAAL Trigger: CAAGGCTGCGGTGTCCACCAACTGCCGAGCAGCGCT...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000371703.8 ENST00000414836.1 |
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| CDS TCA 90 bp | CCAACCTCAGAGGAGACAAAACTTCCCAGGTATCTTCAGGTAAAGTaGCTCTCATCAGCCCAGGACAATCCTTTGGCTTTCTTGGAAGCT | + |
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Preference number: 5 (lower is better) Translates to: PTSEETKLPRYLQVK*LSSAQDNPLAFLEA Trigger: AGCTTCCAAGAAAGCCAAAGGATTGTCCTGGGCTGATGAGAGTCACTTTACCTGAAGATACCTGGGAAGTTTTGTCTCCTCTGAGGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480406.6 |
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| CDS-3UTR CAA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGAGTGGACACCGCAGCCTaGGCGTCACTTTCAGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: LFLLWLMNYKREEGSADRVDTAA*ASLSES Trigger: GCTCTCTGAAAGTGACGCCAAGGCTGCGGTGTCCAC...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000371703.8 ENST00000414836.1 |
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| CDS TCA 90 bp | CCAACCTCAGAGGAGACAAAACTTCCCAGGTATCTTCAGGTAAAGTaGCTCTCATCAGCCCAGGACAATCCTCTTTTAAAGAAGGGTCAA | + |
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Preference number: 5 (lower is better) Translates to: PTSEETKLPRYLQVK*LSSAQDNPLLKKGQ Trigger: TTGACCCTTCTTTAAAAGAGGATTGTCCTGGGCTGATGAGAGTCACTTTACCTGAAGATACCTGGGAAGTTTTGTCTCCTCTGAGGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000489806.5 |
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| CDS-3UTR CAA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGAAAGCGGGAGGATCACTaGAGCCCAGGATTGAGGTTG | + |
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Preference number: 5 (lower is better) Translates to: LFLLWLMNYKREEGSADRKREDH*SPGLRL Trigger: CAACCTCAATCCTGGGCTCAAGTGATCCTCCCGCTT...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371703.8 |
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| CDS TCA 90 bp | CCACTTGGCTTTCTTGGAAGCTGGAAGACAATCTTCATCTCCTTCTaGTGGCCGAGGTTTCTTCACTGTAGAGATAATTCCAAAAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PLGFLGSWKTIFISF*WPRFLHCRDNSKSS Trigger: ACTGCTTTTGGAATTATCTCTACAGTGAAGAAACCTCGGCCATCAGAAGGAGATGAAGATTGTCTTCCAGCTTCCAAGAAAGCCAAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000413330.5 ENST00000470933.1 ENST00000489806.5 |
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| CDS-3UTR CAA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGAACAGCAAGCCTAGATTaGCCACGTCATATGGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LFLLWLMNYKREEGSADRTASLD*PRHMAL Trigger: GAGGGCCATATGACGTGGCAAATCTAGGCTTGCTGT...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000371703.8 ENST00000414836.1 |
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| CDS TCA 90 bp | ACACTTGGCTTTCTTGGAAGCTGGAAGACAATCTTCATCTCCTTCTaGTGGCCGAGGTTTCTTCACTGTAGAGATAATTCCAAAAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: TLGFLGSWKTIFISF*WPRFLHCRDNSKSS Trigger: ACTGCTTTTGGAATTATCTCTACAGTGAAGAAACCTCGGCCATCAGAAGGAGATGAAGATTGTCTTCCAGCTTCCAAGAAAGCCAAGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000371703.8 ENST00000414836.1 ENST00000466462.5 ENST00000479678.1 ENST00000487998.5 |
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| CDS TCA 90 bp | TCCTTTGGCTTTCTTGGAAGCTGGAAGACAATCTTCATCTCCTTCTaGTGGCCGAGGTTTCTTCACTGTAGAGATAATTCCAAAAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SFGFLGSWKTIFISF*WPRFLHCRDNSKSS Trigger: ACTGCTTTTGGAATTATCTCTACAGTGAAGAAACCTCGGCCATCAGAAGGAGATGAAGATTGTCTTCCAGCTTCCAAGAAAGCCAAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480406.6 |
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| CDS-3UTR CAA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGACATAGAGCCGGGCCCTaGAAGAAGTTGCTCTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LFLLWLMNYKREEGSADRHRAGP*KKLLSK Trigger: TTTTGAGAGCAACTTCTTCAAGGGCCCGGCTCTATG...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000371703.8 ENST00000414836.1 |
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| CDS-3UTR CAA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGATTTCAGCCCTCACACTaGGCTTTCTTGGAAGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LFLLWLMNYKREEGSADRFQPSH*AFLEAG Trigger: TCCAGCTTCCAAGAAAGCCAAGTGTGAGGGCTGAAA...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000371703.8 ENST00000414836.1 |
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| CDS-3UTR CAA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGACTTGATCCTAGGAGTTaGAGACCAGCCTCAGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: LFLLWLMNYKREEGSADRLDPRS*RPASAT Trigger: TGTTGCTGAGGCTGGTCTCAAACTCCTAGGATCAAG...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371703.8 |
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| CDS-3UTR CAA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGAGGGCCCTTGAAGAAGTaGCTCTCAAAACATTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LFLLWLMNYKREEGSADRGPLKK*LSKHCS Trigger: ACTGCAATGTTTTGAGAGCAACTTCTTCAAGGGCCC...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000371703.8 ENST00000414836.1 |
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| CDS-3UTR CAA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGATATGAGGTCAGGAGATaGAGACCATCCTGGCTAACA | + |
|
Preference number: 5 (lower is better) Translates to: LFLLWLMNYKREEGSADRYEVRR*RPSWLT Trigger: TGTTAGCCAGGATGGTCTCAATCTCCTGACCTCATA...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371703.8 |
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| CDS-3UTR CAA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGATCACACTTGGCTTTCTaGGAAGCTGGAAGACAATCT | + |
|
Preference number: 5 (lower is better) Translates to: LFLLWLMNYKREEGSADRSHLAF*EAGRQS Trigger: AGATTGTCTTCCAGCTTCCAAGAAAGCCAAGTGTGA...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000371703.8 ENST00000414836.1 |
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| CDS-3UTR CAA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGACAACCCGCAGAACAGTaGTCTTTCTCTTGCTTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LFLLWLMNYKREEGSADRQPAEQ*SFSCLK Trigger: TTTTAAGCAAGAGAAAGACAACTGTTCTGCGGGTTG...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371703.8 |
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| CDS-3UTR CAA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGACAGATTTGCATCAAATaGAGGGCACTGGAAATTGTA | + |
|
Preference number: 5 (lower is better) Translates to: LFLLWLMNYKREEGSADRQICIK*RALEIV Trigger: TACAATTTCCAGTGCCCTCAATTTGATGCAAATCTG...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000371703.8 ENST00000414836.1 |
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| CDS TCA 90 bp | AAATTTGCAGAGCTCACTGAAATGGCAGAATTTGTTCCTATGCTATaGGAACATTCTGCTTTAAGGAAAAGGAGTCAGTTTGACAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: KFAELTEMAEFVPML*EHSALRKRSQFDNS Trigger: GGAATTGTCAAACTGACTCCTTTTCCTTAAAGCAGAATGTTCTCATAGCATAGGAACAAATTCTGCCATTTCAGTGAGCTCTGCAAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487998.5 |
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| CDS-3UTR CAA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGAGTTCAGTCCGATGCTTaGCTATTTTTAATACAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: LFLLWLMNYKREEGSADRVQSDA*LFLIQL Trigger: TAGCTGTATTAAAAATAGCAAAGCATCGGACTGAAC...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000371703.8 |
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| CDS-3UTR CAA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGAAAATTATTTCCAAAGTaGGTTCAGTCCGATGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LFLLWLMNYKREEGSADRKLFPK*VQSDAL Trigger: CAAAGCATCGGACTGAACCAACTTTGGAAATAATTT...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000371703.8 |
||
| CDS-3UTR CAA 90 bp | TTATTTTTGTTGTGGCTGATGAACTATAAAAGGGAAGAAGGGAGTGCTGACAGATCTAAAGGCTTTCCTTaGCAGATTTGCATCAAATTG | + |
|
Preference number: 5 (lower is better) Translates to: LFLLWLMNYKREEGSADRSKGFP*QICIKL Trigger: CAATTTGATGCAAATCTGCAAAGGAAAGCCTTTAGA...TCTGTCAGCACTCCCTTCTTCCCTTTTATAGTTCATCAGCCACAACAAAAATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000414836.1 |
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| CDS TCA 90 bp | TCCTATGCTATGAGAACATTCTGCTTTAAGGAAAAGGAGTCAGTTTaGCAATTCCAGTGTACTACTAATAATAAACTGCCAGATGCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SYAMRTFCFKEKESV*QFQCTTNNKLPDAK Trigger: TTTCGCATCTGGCAGTTTATTATTAGTAGTACACTGGAATTGTCAAACTGACTCCTTTTCCTTAAAGCAGAATGTTCTCATAGCATAGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000487998.5 |
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| CDS TCA 90 bp | TCTTCCCTTGGTATTTTTCTTTCCCTTAAAATTTGCAGAGCTCACTaGAATGGCAGAATTTGTTCCTATGCTATGAGAACATTCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSLGIFLSLKICRAH*NGRICSYAMRTFCF Trigger: AAAGCAGAATGTTCTCATAGCATAGGAACAAATTCTGCCATTTCAGTGAGCTCTGCAAATTTTAAGGGAAAGAAAAATACCAAGGGAAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000487998.5 |
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| CDS TCA 72 bp | GAGGTTGGCCAGGCGCGAAGCCGGGGCAACTCACGGTaGGCGGCTGTCTCCACAAGTCCGCGCAGAGCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: EVGQARSRGNSR*AAVSTSPRRAF Trigger: GAAGGCTCTGCGCGGACTTGTGGAGACAGCCGCTCACCGTGAGTTGCCCCGGCTTCGCGCCTGGCCAACCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000277882.7 |
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| CDS TCA 72 bp | GCCAATCCGGAGTGTGGCCCGATGGTCTGGGTGGCATaGGGTTGGCCAGGCGCGAAGCCGGGGCAACTCACG | + |
|
Preference number: 6 (lower is better) Translates to: ANPECGPMVWVA*GWPGAKPGQLT Trigger: CGTGAGTTGCCCCGGCTTCGCGCCTGGCCAACCTCATGCCACCCAGACCATCGGGCCACACTCCGGATTGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000277882.7 |
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| CDS CAA 72 bp | TCCGGAGTGTGGCCCGATGGTCTGGGTGGCATGAGGTaGGCCAGGCGCGAAGCCGGGGCAACTCACGGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SGVWPDGLGGMR*ARREAGATHGE Trigger: CTCACCGTGAGTTGCCCCGGCTTCGCGCCTGGCCAACCTCATGCCACCCAGACCATCGGGCCACACTCCGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000277882.7 |
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| CDS CAA 90 bp | AATAGCCAATCCGGAGTGTGGCCCGATGGTCTGGGTGGCATGAGGTaGGCCAGGCGCGAAGCCGGGGCAACTCACGGTGAGCGGCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: NSQSGVWPDGLGGMR*ARREAGATHGERLS Trigger: AGACAGCCGCTCACCGTGAGTTGCCCCGGCTTCGCGCCTGGCCAACCTCATGCCACCCAGACCATCGGGCCACACTCCGGATTGGCTATT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000277882.7 |
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| CDS GCA 72 bp | GTACCACCGAGGCCAGTGGGCCAGGCTGTAATGTCCTaGATCAGTCACTGGCCATGGGCCAACCTCAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: VPPRPVGQAVMS*ISHWPWANLRG Trigger: TCCTCTGAGGTTGGCCCATGGCCAGTGACTGATGCAGGACATTACAGCCTGGCCCACTGGCCTCGGTGGTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000480406.6 ENST00000489806.5 |
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| CDS CCA 72 bp | GAAGCGCTGCTCGGCAGTTGGTGGACACCGCAGCCTTaGCGTCACTTTCAGAGAGCCCAAACAGCAAGCCTA | + |
|
Preference number: 6 (lower is better) Translates to: EALLGSWWTPQP*RHFQRAQTASL Trigger: TAGGCTTGCTGTTTGGGCTCTCTGAAAGTGACGCCAAGGCTGCGGTGTCCACCAACTGCCGAGCAGCGCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000277882.7 ENST00000371703.8 ENST00000413330.5 ENST00000414836.1 ENST00000479678.1 ENST00000480406.6 ENST00000487998.5 ENST00000489806.5 |
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| CDS CAA 72 bp | AGAAGCGCTGCTCGGCAGTTGGTGGACACCGCAGCCTaGGCGTCACTTTCAGAGAGCCCAAACAGCAAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: RSAARQLVDTAA*ASLSESPNSKP Trigger: AGGCTTGCTGTTTGGGCTCTCTGAAAGTGACGCCAAGGCTGCGGTGTCCACCAACTGCCGAGCAGCGCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000277882.7 ENST00000371703.8 ENST00000413330.5 ENST00000414836.1 ENST00000479678.1 ENST00000480406.6 ENST00000487998.5 ENST00000489806.5 |
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| CDS CAA 90 bp | TCTCCATGGAGAAGCGCTGCTCGGCAGTTGGTGGACACCGCAGCCTaGGCGTCACTTTCAGAGAGCCCAAACAGCAAGCCTAGATTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SPWRSAARQLVDTAA*ASLSESPNSKPRFA Trigger: GGCAAATCTAGGCTTGCTGTTTGGGCTCTCTGAAAGTGACGCCAAGGCTGCGGTGTCCACCAACTGCCGAGCAGCGCTTCTCCATGGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000371703.8 ENST00000413330.5 ENST00000414836.1 ENST00000479678.1 ENST00000480406.6 ENST00000487998.5 ENST00000489806.5 |
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| CDS CCA 72 bp | CCAGTGGGCCAGGCTGTAATGTCCTGCATCAGTCACTaGCCATGGGCCAACCTCAGAGGAGACAAAACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: PVGQAVMSCISH*PWANLRGDKTS Trigger: GGAAGTTTTGTCTCCTCTGAGGTTGGCCCATGGCCAGTGACTGATGCAGGACATTACAGCCTGGCCCACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000480406.6 ENST00000489806.5 |
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| CDS CCA 72 bp | GGCCAGGCTGTAATGTCCTGCATCAGTCACTGGCCATaGGCCAACCTCAGAGGAGACAAAACTTCCCAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: GQAVMSCISHWP*ANLRGDKTSQV Trigger: TACCTGGGAAGTTTTGTCTCCTCTGAGGTTGGCCCATGGCCAGTGACTGATGCAGGACATTACAGCCTGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000480406.6 ENST00000489806.5 |
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| CDS CAA 72 bp | TTTCTAGTTTCTCCATGGAGAAGCGCTGCTCGGCAGTaGGTGGACACCGCAGCCTTGGCGTCACTTTCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: FLVSPWRSAARQ*VDTAALASLSE Trigger: CTCTGAAAGTGACGCCAAGGCTGCGGTGTCCACCAACTGCCGAGCAGCGCTTCTCCATGGAGAAACTAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENST00000371703.8 ENST00000413330.5 ENST00000414836.1 ENST00000470933.1 ENST00000479678.1 ENST00000480406.6 ENST00000487998.5 ENST00000489806.5 |
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| CDS GCA 72 bp | AAAAGCAGTTTTTCTAGTTTCTCCATGGAGAAGCGCTaGTCGGCAGTTGGTGGACACCGCAGCCTTGGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: KSSFSSFSMEKR*SAVGGHRSLGV Trigger: GACGCCAAGGCTGCGGTGTCCACCAACTGCCGAGCAGCGCTTCTCCATGGAGAAACTAGAAAAACTGCTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENST00000371703.8 ENST00000413330.5 ENST00000414836.1 ENST00000470933.1 ENST00000479678.1 ENST00000480406.6 ENST00000487998.5 ENST00000489806.5 |
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| CDS CAA 90 bp | AAAGCAGTTTTTCTAGTTTCTCCATGGAGAAGCGCTGCTCGGCAGTaGGTGGACACCGCAGCCTTGGCGTCACTTTCAGAGAGCCCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: KAVFLVSPWRSAARQ*VDTAALASLSESPN Trigger: GTTTGGGCTCTCTGAAAGTGACGCCAAGGCTGCGGTGTCCACCAACTGCCGAGCAGCGCTTCTCCATGGAGAAACTAGAAAAACTGCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000371703.8 ENST00000413330.5 ENST00000414836.1 ENST00000479678.1 ENST00000480406.6 ENST00000487998.5 ENST00000489806.5 |
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| CDS CCA 72 bp | GACAGAGACTGGGGCATTCTTTTCAGCCCTCACACTTaGCTTTCTTGGAAGCTGGAAGACAATCTTCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: DRDWGILFSPHT*LSWKLEDNLHL Trigger: GAGATGAAGATTGTCTTCCAGCTTCCAAGAAAGCCAAGTGTGAGGGCTGAAAAGAATGCCCCAGTCTCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000371703.8 ENST00000414836.1 ENST00000466462.5 ENST00000479678.1 ENST00000487998.5 |
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| CDS CAA 90 bp | CCAGGTGCTAGGCCAGGTCCTAAGACCTGTGGTAAGAAAAAGAGATaGTCCATGACATGCCCTCCTTTTAAAGAAGGGTCAAAGCCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: PGARPGPKTCGKKKR*SMTCPPFKEGSKPV Trigger: AACAGGCTTTGACCCTTCTTTAAAAGGAGGGCATGTCATGGACAATCTCTTTTTCTTACCACAGGTCTTAGGACCTGGCCTAGCACCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000470933.1 |
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| CDS TCA 72 bp | TGGAAAAACTGCAACAACATCATAGAGCCGGGCCCTTaGAGAAGTTGCTCTCAAAACATTGCAGTGAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: WKNCNNIIEPGP*RSCSQNIAVRW Trigger: CCATCTCACTGCAATGTTTTGAGAGCAACTTCTTCAAGGGCCCGGCTCTATGATGTTGTTGCAGTTTTTCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000277882.7 ENST00000371703.8 ENST00000413330.5 ENST00000414836.1 ENST00000466462.5 ENST00000487998.5 |
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| CDS CAA 90 bp | AAGCCTGTTCTTGGGAGTATGATCTCTCTGATGAGAGATCAAAAGTaGTCTTTGTTGAATTCTAGTTCTTGGGAGGCTGAGGTGGGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: KPVLGSMISLMRDQK*SLLNSSSWEAEVGG Trigger: TCCTCCCACCTCAGCCTCCCAAGAACTAGAATTCAACAAAGACAACTTTTGATCTCTCATCAGAGAGATCATACTCCCAAGAACAGGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000413330.5 ENST00000470933.1 ENST00000489806.5 |
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| CDS CAA 72 bp | TTGGAAAAACTGCAACAACATCATAGAGCCGGGCCCTaGAAGAAGTTGCTCTCAAAACATTGCAGTGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: LEKLQQHHRAGP*KKLLSKHCSEM Trigger: CATCTCACTGCAATGTTTTGAGAGCAACTTCTTCAAGGGCCCGGCTCTATGATGTTGTTGCAGTTTTTCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENST00000277882.7 ENST00000371703.8 ENST00000413330.5 ENST00000414836.1 ENST00000466462.5 ENST00000487998.5 |
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| CDS TCA 72 bp | TTTCTTGGAAGCTGGAAGACAATCTTCATCTCCTTCTaGTGGCCGAGGTTTCTTCACTGTAGAGATAATTCC | + |
|
Preference number: 6 (lower is better) Translates to: FLGSWKTIFISF*WPRFLHCRDNS Trigger: GGAATTATCTCTACAGTGAAGAAACCTCGGCCATCAGAAGGAGATGAAGATTGTCTTCCAGCTTCCAAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENST00000371703.8 ENST00000413330.5 ENST00000414836.1 ENST00000466462.5 ENST00000470933.1 ENST00000479678.1 ENST00000480406.6 ENST00000487998.5 ENST00000489806.5 |
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| CDS TCA 72 bp | CGGGCCCTTGAAGAAGTTGCTCTCAAAACATTGCAGTaGGATGGATCCGAGACAATAATTGTTAATCTAGTT | + |
|
Preference number: 6 (lower is better) Translates to: RALEEVALKTLQ*DGSETIIVNLV Trigger: AACTAGATTAACAATTATTGTCTCGGATCCATCTCACTGCAATGTTTTGAGAGCAACTTCTTCAAGGGCCCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000277882.7 ENST00000371703.8 ENST00000413330.5 ENST00000414836.1 ENST00000466462.5 ENST00000487998.5 |
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| CDS CAA 72 bp | AGTATGATCTCTCTGATGAGAGATCAAAAGTTGTCTTaGTTGAATTCTAGTTCTTGGGAGGCTGAGGTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SMISLMRDQKLS*LNSSSWEAEVG Trigger: TCCCACCTCAGCCTCCCAAGAACTAGAATTCAACAAAGACAACTTTTGATCTCTCATCAGAGAGATCATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000413330.5 ENST00000470933.1 ENST00000489806.5 |
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| CDS CAA 90 bp | GCACTAGATATAATTACATTCTTTCCTTTGCAGATTTGCATCAAATaGAGGGCACTGGAAATTGTATACCTTCTCATTGTGGAGTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: ALDIITFFPLQICIK*RALEIVYLLIVESL Trigger: CAAAGACTCCACAATGAGAAGGTATACAATTTCCAGTGCCCTCAATTTGATGCAAATCTGCAAAGGAAAGAATGTAATTATATCTAGTGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000277882.7 ENST00000371703.8 ENST00000413330.5 ENST00000480406.6 ENST00000489806.5 |
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| CDS CAA 90 bp | AAAAGCAGTTTTTCTAGTTTCTTTCCTTTGCAGATTTGCATCAAATaGAGGGCACTGGAAATTGTATACCTTCTCATTGTGGAGTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: KSSFSSFFPLQICIK*RALEIVYLLIVESL Trigger: CAAAGACTCCACAATGAGAAGGTATACAATTTCCAGTGCCCTCAATTTGATGCAAATCTGCAAAGGAAAGAAACTAGAAAAACTGCTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000466462.5 |
||
| CDS TCA 72 bp | TTGGTCTTGATTTTCCCTGTACAATTGGCAAAGTTGTaGAGAGTTCAGAAACAGCTACTGGTTTTTCAATTT | + |
|
Preference number: 6 (lower is better) Translates to: LVLIFPVQLAKL*RVQKQLLVFQF Trigger: AAATTGAAAAACCAGTAGCTGTTTCTGAACTCTTCACAACTTTGCCAATTGTACAGGGAAAATCAAGACCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000277882.7 ENST00000371703.8 ENST00000413330.5 ENST00000414836.1 ENST00000487998.5 |
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| CDS CAA 72 bp | TTTTCTAGTTTCTTTCCTTTGCAGATTTGCATCAAATaGAGGGCACTGGAAATTGTATACCTTCTCATTGTG | + |
|
Preference number: 6 (lower is better) Translates to: FSSFFPLQICIK*RALEIVYLLIV Trigger: CACAATGAGAAGGTATACAATTTCCAGTGCCCTCAATTTGATGCAAATCTGCAAAGGAAAGAAACTAGAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000466462.5 |
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