Pregenerated sensors for RPP21 (Homo sapiens)
Ensembl gene IDs: ENSG00000239865, ENSG00000239927, ENSG00000241779, ENSG00000241863, ENSG00000242726, ENSG00000243009Ensembl transcript IDs: ENST00000376642.8, ENST00000411515.6, ENST00000411784.6, ENST00000412659.6, ENST00000413228.5, ENST00000414187.6, ENST00000415583.6, ENST00000416977.6, ENST00000418043.6, ENST00000422320.5, ENST00000422720.2, ENST00000424616.6, ENST00000425575.2, ENST00000427637.2, ENST00000428040.6, ENST00000430819.6, ENST00000430900.6, ENST00000433076.6, ENST00000434282.6, ENST00000435318.2, ENST00000436442.2, ENST00000437470.2, ENST00000439624.5, ENST00000439797.2, ENST00000442966.7, ENST00000452262.5, ENST00000455025.6, ENST00000456870.6, ENST00000460847.1, ENST00000461233.5, ENST00000463825.5, ENST00000464725.5, ENST00000465345.5, ENST00000465470.5, ENST00000466327.5, ENST00000467113.5, ENST00000467844.1, ENST00000468883.5, ENST00000470122.1, ENST00000471153.5, ENST00000472865.5, ENST00000472882.5, ENST00000473266.1, ENST00000473319.5, ENST00000476358.5, ENST00000478784.5, ENST00000480480.1, ENST00000482357.5, ENST00000482830.1, ENST00000484136.5, ENST00000484944.5, ENST00000488929.5, ENST00000489124.5, ENST00000489296.5, ENST00000490158.5, ENST00000490988.1, ENST00000491477.5, ENST00000491758.5, ENST00000492100.1, ENST00000493641.1, ENST00000496417.5, ENST00000498414.5, ENST00000498637.5, ENST00000550581.3, ENST00000550618.2, ENST00000551862.5, ENST00000552136.5, ENST00000552257.4, ENST00000552950.4
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | AACCTCGCCAGCGCCTGGTTCTCGGGGTCCTGGGCAAGGACACAATaGGCGGCCTGCGGGAGGGGAGCAGTCACTCTGGGACGCCGAGCA | + |
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Preference number: 5 (lower is better) Translates to: NLASAWFSGSWARTQ*AACGRGAVTLGRRA Trigger: TGCTCGGCGTCCCAGAGTGACTGCTCCCCTCCCGCAGGCCGCCCATTGTGTCCTTGCCCAGGACCCCGAGAACCAGGCGCTGGCGAGGTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000411784.6 ENST00000413228.5 ENST00000422320.5 ENST00000428040.6 ENST00000430900.6 ENST00000439624.5 ENST00000452262.5 |
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| CDS CCA 90 bp | TGGGGCCCTTGTCGCAGACTCACCTGGTACAGGAAGTTGAGCCTCTaGAAGGCCTCGCGGTCCTTCACCGGCCCCGCCATCACCGCCGCG | + |
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Preference number: 5 (lower is better) Translates to: WGPCRRLTWYRKLSL*KASRSFTGPAITAA Trigger: CGCGGCGGTGATGGCGGGGCCGGTGAAGGACCGCGAGGCCTTCCAGAGGCTCAACTTCCTGTACCAGGTGAGTCTGCGACAAGGGCCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000411784.6 ENST00000413228.5 ENST00000422320.5 ENST00000428040.6 ENST00000430900.6 ENST00000439624.5 ENST00000452262.5 |
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| CDS CCA 90 bp | TGCGGGAGGGGAGCAGTCACTCTGGGACGCCGAGCACCGTCCCCGTaGGGCCCTTGTCGCAGACTCACCTGGTACAGGAAGTTGAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: CGRGAVTLGRRAPSP*GPCRRLTWYRKLSL Trigger: GAGGCTCAACTTCCTGTACCAGGTGAGTCTGCGACAAGGGCCCCACGGGGACGGTGCTCGGCGTCCCAGAGTGACTGCTCCCCTCCCGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000411784.6 ENST00000413228.5 ENST00000422320.5 ENST00000428040.6 ENST00000430900.6 ENST00000439624.5 ENST00000452262.5 |
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| CDS CCA 90 bp | CCAGCGCTGTCCCCTGCAGCCGCCGCAAGACGAGCCGCTTCGCAATaGTCCTCTCAGTGTAGCAGTAAAACCTCGCCAGCGCCTGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: PALSPAAAARRAASQ*SSQCSSKTSPAPGS Trigger: AGAACCAGGCGCTGGCGAGGTTTTACTGCTACACTGAGAGGACCATTGCGAAGCGGCTCGTCTTGCGGCGGCTGCAGGGGACAGCGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000461233.5 ENST00000464725.5 ENST00000465345.5 ENST00000484944.5 ENST00000489124.5 ENST00000491758.5 ENST00000498637.5 |
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| CDS CCA 90 bp | CCGCCCCGTGGCTGTCTCACCGCCGCAAGACGAGCCGCTTCGCAATaGTCCTCTCAGTGTAGCAGTAAAACCTCGCCAGCGCCTGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: PPRGCLTAARRAASQ*SSQCSSKTSPAPGS Trigger: AGAACCAGGCGCTGGCGAGGTTTTACTGCTACACTGAGAGGACCATTGCGAAGCGGCTCGTCTTGCGGCGGTGAGACAGCCACGGGGCGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 14 transcripts: ENST00000460847.1 ENST00000467844.1 ENST00000468883.5 ENST00000470122.1 ENST00000472865.5 ENST00000473266.1 ENST00000476358.5 ENST00000478784.5 ENST00000482357.5 ENST00000488929.5 ENST00000490988.1 ENST00000492100.1 ENST00000493641.1 ENST00000498414.5 |
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| CDS GCA 90 bp | GCTTGGCTCCCGAGCTGGGCCTCAGGCCTGTCTCCCCAGAGTAAATaGCCGGGATCATTGAGGAAGCGTTGGCTGCGCTGGCATGTTAGG | + |
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Preference number: 5 (lower is better) Translates to: AWLPSWASGLSPQSK*PGSLRKRWLRWHVR Trigger: CCTAACATGCCAGCGCAGCCAACGCTTCCTCAATGATCCCGGGCATTTACTCTGGGGAGACAGGCCTGAGGCCCAGCTCGGGAGCCAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 62 transcripts: ENST00000376642.8 ENST00000411515.6 ENST00000411784.6 ENST00000412659.6 ENST00000413228.5 ENST00000414187.6 ENST00000415583.6 ENST00000416977.6 ENST00000418043.6 ENST00000422320.5 ENST00000422720.2 ENST00000424616.6 ENST00000425575.2 ENST00000427637.2 ENST00000428040.6 ENST00000430819.6 ENST00000430900.6 ENST00000433076.6 ENST00000434282.6 ENST00000435318.2 ENST00000436442.2 ENST00000437470.2 ENST00000439624.5 ENST00000439797.2 ENST00000442966.7 ENST00000452262.5 ENST00000455025.6 ENST00000456870.6 ENST00000460847.1 ENST00000461233.5 ENST00000464725.5 ENST00000465345.5 ENST00000465470.5 ENST00000467844.1 ENST00000468883.5 ENST00000470122.1 ENST00000471153.5 ENST00000472865.5 ENST00000472882.5 ENST00000473266.1 ENST00000476358.5 ENST00000478784.5 ENST00000482357.5 ENST00000482830.1 ENST00000484944.5 ENST00000488929.5 ENST00000489124.5 ENST00000490158.5 ENST00000490988.1 ENST00000491477.5 ENST00000491758.5 ENST00000492100.1 ENST00000493641.1 ENST00000496417.5 ENST00000498414.5 ENST00000498637.5 ENST00000550581.3 ENST00000550618.2 ENST00000551862.5 ENST00000552136.5 ENST00000552257.4 ENST00000552950.4 |
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| CDS TCA 90 bp | GCTGGGCCTCAGGCCTGTCTCCCCAGAGTAAATGCCCGGGATCATTaGGGAAGCGTTGGCTGCGCTGGCATGTTAGGCAGGTCTGTACGG | + |
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Preference number: 5 (lower is better) Translates to: AGPQACLPRVNARDH*GSVGCAGMLGRSVR Trigger: CCGTACAGACCTGCCTAACATGCCAGCGCAGCCAACGCTTCCTCAATGATCCCGGGCATTTACTCTGGGGAGACAGGCCTGAGGCCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 62 transcripts: ENST00000376642.8 ENST00000411515.6 ENST00000411784.6 ENST00000412659.6 ENST00000413228.5 ENST00000414187.6 ENST00000415583.6 ENST00000416977.6 ENST00000418043.6 ENST00000422320.5 ENST00000422720.2 ENST00000424616.6 ENST00000425575.2 ENST00000427637.2 ENST00000428040.6 ENST00000430819.6 ENST00000430900.6 ENST00000433076.6 ENST00000434282.6 ENST00000435318.2 ENST00000436442.2 ENST00000437470.2 ENST00000439624.5 ENST00000439797.2 ENST00000442966.7 ENST00000452262.5 ENST00000455025.6 ENST00000456870.6 ENST00000460847.1 ENST00000461233.5 ENST00000464725.5 ENST00000465345.5 ENST00000465470.5 ENST00000467844.1 ENST00000468883.5 ENST00000470122.1 ENST00000471153.5 ENST00000472865.5 ENST00000472882.5 ENST00000473266.1 ENST00000476358.5 ENST00000478784.5 ENST00000482357.5 ENST00000482830.1 ENST00000484944.5 ENST00000488929.5 ENST00000489124.5 ENST00000490158.5 ENST00000490988.1 ENST00000491477.5 ENST00000491758.5 ENST00000492100.1 ENST00000493641.1 ENST00000496417.5 ENST00000498414.5 ENST00000498637.5 ENST00000550581.3 ENST00000550618.2 ENST00000551862.5 ENST00000552136.5 ENST00000552257.4 ENST00000552950.4 |
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| CDS CCA 90 bp | CCCCAGAGTAAATGCCCGGGATCATTGAGGAAGCGTTGGCTGCGCTaGCATGTTAGGCAGGTCTGTACGGTCCAGCGCTGTCCCCTGCAG | + |
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Preference number: 5 (lower is better) Translates to: PQSKCPGSLRKRWLR*HVRQVCTVQRCPLQ Trigger: CTGCAGGGGACAGCGCTGGACCGTACAGACCTGCCTAACATGCCAGCGCAGCCAACGCTTCCTCAATGATCCCGGGCATTTACTCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 62 transcripts: ENST00000376642.8 ENST00000411515.6 ENST00000411784.6 ENST00000412659.6 ENST00000413228.5 ENST00000414187.6 ENST00000415583.6 ENST00000416977.6 ENST00000418043.6 ENST00000422320.5 ENST00000422720.2 ENST00000424616.6 ENST00000425575.2 ENST00000427637.2 ENST00000428040.6 ENST00000430819.6 ENST00000430900.6 ENST00000433076.6 ENST00000434282.6 ENST00000435318.2 ENST00000436442.2 ENST00000437470.2 ENST00000439624.5 ENST00000439797.2 ENST00000442966.7 ENST00000452262.5 ENST00000455025.6 ENST00000456870.6 ENST00000460847.1 ENST00000461233.5 ENST00000464725.5 ENST00000465345.5 ENST00000465470.5 ENST00000467844.1 ENST00000468883.5 ENST00000470122.1 ENST00000471153.5 ENST00000472865.5 ENST00000472882.5 ENST00000473266.1 ENST00000476358.5 ENST00000478784.5 ENST00000482357.5 ENST00000482830.1 ENST00000484944.5 ENST00000488929.5 ENST00000489124.5 ENST00000490158.5 ENST00000490988.1 ENST00000491477.5 ENST00000491758.5 ENST00000492100.1 ENST00000493641.1 ENST00000496417.5 ENST00000498414.5 ENST00000498637.5 ENST00000550581.3 ENST00000550618.2 ENST00000551862.5 ENST00000552136.5 ENST00000552257.4 ENST00000552950.4 |
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| CDS CCA 90 bp | GGGCGGAGGAGGATAGTGGTCGCCGCAAGACGAGCCGCTTCGCAATaGTCCTCTCAGTGTAGCAGTAAAACCTCGCCAGCGCCTGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: GRRRIVVAARRAASQ*SSQCSSKTSPAPGS Trigger: AGAACCAGGCGCTGGCGAGGTTTTACTGCTACACTGAGAGGACCATTGCGAAGCGGCTCGTCTTGCGGCGACCACTATCCTCCTCCGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000411515.6 ENST00000412659.6 ENST00000425575.2 ENST00000430819.6 ENST00000433076.6 ENST00000455025.6 ENST00000456870.6 |
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| CDS CCA 90 bp | GGCCTGTCTCCCCAGAGTAAATGCCCGGGATCATTGAGGAAGCGTTaGCTGCGCTGGCATGTTAGGCAGGTCTGTACGGTCCAGCGCTGT | + |
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Preference number: 5 (lower is better) Translates to: GLSPQSKCPGSLRKR*LRWHVRQVCTVQRC Trigger: ACAGCGCTGGACCGTACAGACCTGCCTAACATGCCAGCGCAGCCAACGCTTCCTCAATGATCCCGGGCATTTACTCTGGGGAGACAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 62 transcripts: ENST00000376642.8 ENST00000411515.6 ENST00000411784.6 ENST00000412659.6 ENST00000413228.5 ENST00000414187.6 ENST00000415583.6 ENST00000416977.6 ENST00000418043.6 ENST00000422320.5 ENST00000422720.2 ENST00000424616.6 ENST00000425575.2 ENST00000427637.2 ENST00000428040.6 ENST00000430819.6 ENST00000430900.6 ENST00000433076.6 ENST00000434282.6 ENST00000435318.2 ENST00000436442.2 ENST00000437470.2 ENST00000439624.5 ENST00000439797.2 ENST00000442966.7 ENST00000452262.5 ENST00000455025.6 ENST00000456870.6 ENST00000460847.1 ENST00000461233.5 ENST00000464725.5 ENST00000465345.5 ENST00000465470.5 ENST00000467844.1 ENST00000468883.5 ENST00000470122.1 ENST00000471153.5 ENST00000472865.5 ENST00000472882.5 ENST00000473266.1 ENST00000476358.5 ENST00000478784.5 ENST00000482357.5 ENST00000482830.1 ENST00000484944.5 ENST00000488929.5 ENST00000489124.5 ENST00000490158.5 ENST00000490988.1 ENST00000491477.5 ENST00000491758.5 ENST00000492100.1 ENST00000493641.1 ENST00000496417.5 ENST00000498414.5 ENST00000498637.5 ENST00000550581.3 ENST00000550618.2 ENST00000551862.5 ENST00000552136.5 ENST00000552257.4 ENST00000552950.4 |
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| CDS CCA 90 bp | TCCTCTTCACCGAGGGATCCCGCCGCAAGACGAGCCGCTTCGCAATaGTCCTCTCAGTGTAGCAGTAAAACCTCGCCAGCGCCTGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: SSSPRDPAARRAASQ*SSQCSSKTSPAPGS Trigger: AGAACCAGGCGCTGGCGAGGTTTTACTGCTACACTGAGAGGACCATTGCGAAGCGGCTCGTCTTGCGGCGGGATCCCTCGGTGAAGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 29 transcripts: ENST00000411784.6 ENST00000413228.5 ENST00000414187.6 ENST00000416977.6 ENST00000418043.6 ENST00000422320.5 ENST00000422720.2 ENST00000424616.6 ENST00000427637.2 ENST00000428040.6 ENST00000434282.6 ENST00000435318.2 ENST00000436442.2 ENST00000437470.2 ENST00000439624.5 ENST00000439797.2 ENST00000442966.7 ENST00000452262.5 ENST00000463825.5 ENST00000466327.5 ENST00000467113.5 ENST00000473319.5 ENST00000480480.1 ENST00000484136.5 ENST00000550581.3 ENST00000550618.2 ENST00000551862.5 ENST00000552136.5 ENST00000552950.4 |
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| CDS CCA 90 bp | TCCTCTTCACCGAGGGATCTCGCCGCAAGACGAGCCGCTTCGCAATaGTCCTCTCAGTGTAGCAGTAAAACCTCGCCAGCGCCTGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: SSSPRDLAARRAASQ*SSQCSSKTSPAPGS Trigger: AGAACCAGGCGCTGGCGAGGTTTTACTGCTACACTGAGAGGACCATTGCGAAGCGGCTCGTCTTGCGGCGAGATCCCTCGGTGAAGAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000376642.8 ENST00000415583.6 ENST00000430900.6 ENST00000489296.5 ENST00000552257.4 |
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| CDS CCA 90 bp | AGGGTTGTAGTGGTTTGGAATCTCTCACCTGCTTGGCTCCCGAGCTaGGCCTCAGGCCTGTCTCCCCAGAGTAAATGCCCGGGATCATTG | + |
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Preference number: 5 (lower is better) Translates to: RVVVVWNLSPAWLPS*ASGLSPQSKCPGSL Trigger: CAATGATCCCGGGCATTTACTCTGGGGAGACAGGCCTGAGGCCCAGCTCGGGAGCCAAGCAGGTGAGAGATTCCAAACCACTACAACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000415583.6 ENST00000422720.2 ENST00000427637.2 ENST00000435318.2 ENST00000436442.2 ENST00000437470.2 ENST00000439797.2 |
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| CDS TCA 90 bp | TTAGGCAGGTCTGTACGGTCCAGCGCTGTCCCCTGCAGCCTAGGGTaGACATGGGAAAAAGACTGTCCACGTTTAGAAGTAACGGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: LGRSVRSSAVPCSLG*TWEKDCPRLEVTVS Trigger: AGAGACCGTTACTTCTAAACGTGGACAGTCTTTTTCCCATGTTCACCCTAGGCTGCAGGGGACAGCGCTGGACCGTACAGACCTGCCTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000467844.1 ENST00000468883.5 ENST00000472865.5 ENST00000476358.5 ENST00000478784.5 ENST00000488929.5 ENST00000498414.5 |
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| CDS GCA 90 bp | CAAGACTTCAAGAACTGGCCTGTTTCCCCCTCCAGTCTCATGTTTTaGCCTCCTACCTCAAACTCCAGCCTCCTGAACTCTCATTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: QDFKNWPVSPSSLMF*PPTSNSSLLNSHFF Trigger: AAAGAAATGAGAGTTCAGGAGGCTGGAGTTTGAGGTAGGAGGGCAAAACATGAGACTGGAGGGGGAAACAGGCCAGTTCTTGAAGTCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000467844.1 ENST00000468883.5 ENST00000472865.5 ENST00000476358.5 ENST00000478784.5 ENST00000488929.5 ENST00000498414.5 |
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| CDS CCA 90 bp | TGGGAATCGTCCTCCACAAAGCCGAACAACATCTATTATTGTGCATaGGTGGGGTTGCCTCTTAAAAGTTATTATTTATTGCCCACACTG | + |
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Preference number: 5 (lower is better) Translates to: WESSSTKPNNIYYCA*VGLPLKSYYLLPTL Trigger: CAGTGTGGGCAATAAATAATAACTTTTAAGAGGCAACCCCACCCATGCACAATAATAGATGTTGTTCGGCTTTGTGGAGGACGATTCCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 14 transcripts: ENST00000463825.5 ENST00000466327.5 ENST00000467113.5 ENST00000467844.1 ENST00000468883.5 ENST00000472865.5 ENST00000473319.5 ENST00000476358.5 ENST00000478784.5 ENST00000480480.1 ENST00000484136.5 ENST00000488929.5 ENST00000489296.5 ENST00000498414.5 |
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| CDS CCA 72 bp | GGAGCAGTCACTCTGGGACGCCGAGCACCGTCCCCGTaGGGCCCTTGTCGCAGACTCACCTGGTACAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: GAVTLGRRAPSP*GPCRRLTWYRK Trigger: CTTCCTGTACCAGGTGAGTCTGCGACAAGGGCCCCACGGGGACGGTGCTCGGCGTCCCAGAGTGACTGCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000411784.6 ENST00000413228.5 ENST00000422320.5 ENST00000428040.6 ENST00000430900.6 ENST00000439624.5 ENST00000452262.5 |
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| CDS CAA 90 bp | GGGAGCAGTCACTCTGGGACGCCGAGCACCGTCCCCGTGGGGCCCTaGTCGCAGACTCACCTGGTACAGGAAGTTGAGCCTCTGGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: GSSHSGTPSTVPVGP*SQTHLVQEVEPLEG Trigger: GCCTTCCAGAGGCTCAACTTCCTGTACCAGGTGAGTCTGCGACAAGGGCCCCACGGGGACGGTGCTCGGCGTCCCAGAGTGACTGCTCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000411784.6 ENST00000413228.5 ENST00000422320.5 ENST00000428040.6 ENST00000430900.6 ENST00000439624.5 ENST00000452262.5 |
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| CDS TCA 72 bp | GGGGCCCTTGTCGCAGACTCACCTGGTACAGGAAGTTaGGCCTCTGGAAGGCCTCGCGGTCCTTCACCGGCC | + |
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Preference number: 6 (lower is better) Translates to: GALVADSPGTGS*ASGRPRGPSPA Trigger: GGCCGGTGAAGGACCGCGAGGCCTTCCAGAGGCTCAACTTCCTGTACCAGGTGAGTCTGCGACAAGGGCCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000411784.6 ENST00000413228.5 ENST00000422320.5 ENST00000428040.6 ENST00000430900.6 ENST00000439624.5 ENST00000452262.5 |
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| CDS CCA 72 bp | ACACAATGGGCGGCCTGGTACAGGAAGTTGAGCCTCTaGAAGGCCTCGCGGTCCTTCACCGGCCCCGCCATC | + |
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Preference number: 6 (lower is better) Translates to: TQWAAWYRKLSL*KASRSFTGPAI Trigger: GATGGCGGGGCCGGTGAAGGACCGCGAGGCCTTCCAGAGGCTCAACTTCCTGTACCAGGCCGCCCATTGTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 48 transcripts: ENST00000376642.8 ENST00000411515.6 ENST00000412659.6 ENST00000414187.6 ENST00000415583.6 ENST00000416977.6 ENST00000418043.6 ENST00000422720.2 ENST00000424616.6 ENST00000425575.2 ENST00000427637.2 ENST00000430819.6 ENST00000433076.6 ENST00000434282.6 ENST00000435318.2 ENST00000436442.2 ENST00000437470.2 ENST00000439797.2 ENST00000442966.7 ENST00000455025.6 ENST00000456870.6 ENST00000460847.1 ENST00000461233.5 ENST00000463825.5 ENST00000464725.5 ENST00000465345.5 ENST00000466327.5 ENST00000467113.5 ENST00000467844.1 ENST00000468883.5 ENST00000470122.1 ENST00000472865.5 ENST00000473266.1 ENST00000473319.5 ENST00000476358.5 ENST00000478784.5 ENST00000482357.5 ENST00000484136.5 ENST00000484944.5 ENST00000488929.5 ENST00000489124.5 ENST00000489296.5 ENST00000490988.1 ENST00000491758.5 ENST00000492100.1 ENST00000493641.1 ENST00000498414.5 ENST00000498637.5 |
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| CDS CCA 72 bp | TCACCGAGGGATCCCTGGTACAGGAAGTTGAGCCTCTaGAAGGCCTCGCGGTCCTTCACCGGCCCCGCCATC | + |
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Preference number: 6 (lower is better) Translates to: SPRDPWYRKLSL*KASRSFTGPAI Trigger: GATGGCGGGGCCGGTGAAGGACCGCGAGGCCTTCCAGAGGCTCAACTTCCTGTACCAGGGATCCCTCGGTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000465470.5 ENST00000471153.5 ENST00000482830.1 ENST00000490158.5 ENST00000491477.5 ENST00000496417.5 |
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| CDS CCA 72 bp | TGGTTCTCGGGGTCCTGGTACAGGAAGTTGAGCCTCTaGAAGGCCTCGCGGTCCTTCACCGGCCCCGCCATC | + |
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Preference number: 6 (lower is better) Translates to: WFSGSWYRKLSL*KASRSFTGPAI Trigger: GATGGCGGGGCCGGTGAAGGACCGCGAGGCCTTCCAGAGGCTCAACTTCCTGTACCAGGACCCCGAGAACCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000480480.1 |
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| CDS CAA 72 bp | CACTCTGGGACGCCGAGCACCGTCCCCGTGGGGCCCTaGTCGCAGACTCACCTGGTACAGGAAGTTGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: HSGTPSTVPVGP*SQTHLVQEVEP Trigger: AGGCTCAACTTCCTGTACCAGGTGAGTCTGCGACAAGGGCCCCACGGGGACGGTGCTCGGCGTCCCAGAGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000411784.6 ENST00000413228.5 ENST00000422320.5 ENST00000428040.6 ENST00000430900.6 ENST00000439624.5 ENST00000452262.5 |
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| CDS CCA 72 bp | TGTCGCAGACTCACCTGGTACAGGAAGTTGAGCCTCTaGAAGGCCTCGCGGTCCTTCACCGGCCCCGCCATC | + |
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Preference number: 6 (lower is better) Translates to: CRRLTWYRKLSL*KASRSFTGPAI Trigger: GATGGCGGGGCCGGTGAAGGACCGCGAGGCCTTCCAGAGGCTCAACTTCCTGTACCAGGTGAGTCTGCGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000411784.6 ENST00000413228.5 ENST00000422320.5 ENST00000428040.6 ENST00000430900.6 ENST00000439624.5 ENST00000452262.5 |
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| CDS CCA 72 bp | TCACCGAGGGATCTCTGGTACAGGAAGTTGAGCCTCTaGAAGGCCTCGCGGTCCTTCACCGGCCCCGCCATC | + |
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Preference number: 6 (lower is better) Translates to: SPRDLWYRKLSL*KASRSFTGPAI Trigger: GATGGCGGGGCCGGTGAAGGACCGCGAGGCCTTCCAGAGGCTCAACTTCCTGTACCAGAGATCCCTCGGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000472882.5 |
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| CDS CAA 72 bp | TGGGGCCCTTGTCGCAGACTCACCTGGTACAGGAAGTaGAGCCTCTGGAAGGCCTCGCGGTCCTTCACCGGC | + |
|
Preference number: 6 (lower is better) Translates to: WGPCRRLTWYRK*SLWKASRSFTG Trigger: GCCGGTGAAGGACCGCGAGGCCTTCCAGAGGCTCAACTTCCTGTACCAGGTGAGTCTGCGACAAGGGCCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000411784.6 ENST00000413228.5 ENST00000422320.5 ENST00000428040.6 ENST00000430900.6 ENST00000439624.5 ENST00000452262.5 |
||
| CDS TCA 72 bp | GCCAAGTGGGCCAGGTCCCGGCGCTTGTCCCCAAGGTaGGCAGCATTTTCTCGGAGTCGCTGCAGAATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: AKWARSRRLSPR*AAFSRSRCRMS Trigger: GGACATTCTGCAGCGACTCCGAGAAAATGCTGCTCACCTTGGGGACAAGCGCCGGGACCTGGCCCACTTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000550581.3 ENST00000550618.2 ENST00000551862.5 ENST00000552136.5 ENST00000552257.4 ENST00000552950.4 |
||
| CDS CCA 72 bp | CCGAGGGATCCCGCCGCAAGACGAGCCGCTTCGCAATaGTCCTCTCAGTGTAGCAGTAAAACCTCGCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: PRDPAARRAASQ*SSQCSSKTSPA Trigger: CGCTGGCGAGGTTTTACTGCTACACTGAGAGGACCATTGCGAAGCGGCTCGTCTTGCGGCGGGATCCCTCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 29 transcripts: ENST00000411784.6 ENST00000413228.5 ENST00000414187.6 ENST00000416977.6 ENST00000418043.6 ENST00000422320.5 ENST00000422720.2 ENST00000424616.6 ENST00000427637.2 ENST00000428040.6 ENST00000434282.6 ENST00000435318.2 ENST00000436442.2 ENST00000437470.2 ENST00000439624.5 ENST00000439797.2 ENST00000442966.7 ENST00000452262.5 ENST00000463825.5 ENST00000466327.5 ENST00000467113.5 ENST00000473319.5 ENST00000480480.1 ENST00000484136.5 ENST00000550581.3 ENST00000550618.2 ENST00000551862.5 ENST00000552136.5 ENST00000552950.4 |
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| CDS CCA 72 bp | TCCCCTGCAGCCGCCGCAAGACGAGCCGCTTCGCAATaGTCCTCTCAGTGTAGCAGTAAAACCTCGCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: SPAAAARRAASQ*SSQCSSKTSPA Trigger: CGCTGGCGAGGTTTTACTGCTACACTGAGAGGACCATTGCGAAGCGGCTCGTCTTGCGGCGGCTGCAGGGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 7 transcripts: ENST00000461233.5 ENST00000464725.5 ENST00000465345.5 ENST00000484944.5 ENST00000489124.5 ENST00000491758.5 ENST00000498637.5 |
||
| CDS TCA 72 bp | ACTCCTGCGAATCCCACACCCAACATCCATCTACAGTaGGAAAGGCGCTGTTGGCCTCCAGTGCCCGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: TPANPTPNIHLQ*ERRCWPPVPAP Trigger: GGGGGCGGGCACTGGAGGCCAACAGCGCCTTTCTCACTGTAGATGGATGTTGGGTGTGGGATTCGCAGGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 14 transcripts: ENST00000463825.5 ENST00000466327.5 ENST00000467113.5 ENST00000467844.1 ENST00000468883.5 ENST00000472865.5 ENST00000473319.5 ENST00000476358.5 ENST00000478784.5 ENST00000480480.1 ENST00000484136.5 ENST00000488929.5 ENST00000489296.5 ENST00000498414.5 |
||
| CDS CCA 72 bp | CCGAGGGATCTCGCCGCAAGACGAGCCGCTTCGCAATaGTCCTCTCAGTGTAGCAGTAAAACCTCGCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: PRDLAARRAASQ*SSQCSSKTSPA Trigger: CGCTGGCGAGGTTTTACTGCTACACTGAGAGGACCATTGCGAAGCGGCTCGTCTTGCGGCGAGATCCCTCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000376642.8 ENST00000415583.6 ENST00000430900.6 ENST00000489296.5 ENST00000552257.4 |
||
| CDS CCA 72 bp | GGCTGTCTCACCGCCGCAAGACGAGCCGCTTCGCAATaGTCCTCTCAGTGTAGCAGTAAAACCTCGCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: GCLTAARRAASQ*SSQCSSKTSPA Trigger: CGCTGGCGAGGTTTTACTGCTACACTGAGAGGACCATTGCGAAGCGGCTCGTCTTGCGGCGGTGAGACAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000460847.1 ENST00000467844.1 ENST00000468883.5 ENST00000470122.1 ENST00000472865.5 ENST00000473266.1 ENST00000476358.5 ENST00000478784.5 ENST00000482357.5 ENST00000488929.5 ENST00000490988.1 ENST00000492100.1 ENST00000493641.1 ENST00000498414.5 |
||
| CDS CAA 90 bp | AGCTGGGCCTCAGGCCTGTCTCCCCAGAGTAAATGCCCGGGATCATaGAGGAAGCGTTGGCTGCGCTGGCATGTTAGGCAGGTCTGTACG | + |
|
Preference number: 6 (lower is better) Translates to: SWASGLSPQSKCPGS*RKRWLRWHVRQVCT Trigger: CGTACAGACCTGCCTAACATGCCAGCGCAGCCAACGCTTCCTCAATGATCCCGGGCATTTACTCTGGGGAGACAGGCCTGAGGCCCAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 62 transcripts: ENST00000376642.8 ENST00000411515.6 ENST00000411784.6 ENST00000412659.6 ENST00000413228.5 ENST00000414187.6 ENST00000415583.6 ENST00000416977.6 ENST00000418043.6 ENST00000422320.5 ENST00000422720.2 ENST00000424616.6 ENST00000425575.2 ENST00000427637.2 ENST00000428040.6 ENST00000430819.6 ENST00000430900.6 ENST00000433076.6 ENST00000434282.6 ENST00000435318.2 ENST00000436442.2 ENST00000437470.2 ENST00000439624.5 ENST00000439797.2 ENST00000442966.7 ENST00000452262.5 ENST00000455025.6 ENST00000456870.6 ENST00000460847.1 ENST00000461233.5 ENST00000464725.5 ENST00000465345.5 ENST00000465470.5 ENST00000467844.1 ENST00000468883.5 ENST00000470122.1 ENST00000471153.5 ENST00000472865.5 ENST00000472882.5 ENST00000473266.1 ENST00000476358.5 ENST00000478784.5 ENST00000482357.5 ENST00000482830.1 ENST00000484944.5 ENST00000488929.5 ENST00000489124.5 ENST00000490158.5 ENST00000490988.1 ENST00000491477.5 ENST00000491758.5 ENST00000492100.1 ENST00000493641.1 ENST00000496417.5 ENST00000498414.5 ENST00000498637.5 ENST00000550581.3 ENST00000550618.2 ENST00000551862.5 ENST00000552136.5 ENST00000552257.4 ENST00000552950.4 |
||
| CDS TCA 72 bp | CAGGCCTGTCTCCCCAGAGTAAATGCCCGGGATCATTaGGGAAGCGTTGGCTGCGCTGGCATGTTAGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QACLPRVNARDH*GSVGCAGMLGR Trigger: CCTGCCTAACATGCCAGCGCAGCCAACGCTTCCTCAATGATCCCGGGCATTTACTCTGGGGAGACAGGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 62 transcripts: ENST00000376642.8 ENST00000411515.6 ENST00000411784.6 ENST00000412659.6 ENST00000413228.5 ENST00000414187.6 ENST00000415583.6 ENST00000416977.6 ENST00000418043.6 ENST00000422320.5 ENST00000422720.2 ENST00000424616.6 ENST00000425575.2 ENST00000427637.2 ENST00000428040.6 ENST00000430819.6 ENST00000430900.6 ENST00000433076.6 ENST00000434282.6 ENST00000435318.2 ENST00000436442.2 ENST00000437470.2 ENST00000439624.5 ENST00000439797.2 ENST00000442966.7 ENST00000452262.5 ENST00000455025.6 ENST00000456870.6 ENST00000460847.1 ENST00000461233.5 ENST00000464725.5 ENST00000465345.5 ENST00000465470.5 ENST00000467844.1 ENST00000468883.5 ENST00000470122.1 ENST00000471153.5 ENST00000472865.5 ENST00000472882.5 ENST00000473266.1 ENST00000476358.5 ENST00000478784.5 ENST00000482357.5 ENST00000482830.1 ENST00000484944.5 ENST00000488929.5 ENST00000489124.5 ENST00000490158.5 ENST00000490988.1 ENST00000491477.5 ENST00000491758.5 ENST00000492100.1 ENST00000493641.1 ENST00000496417.5 ENST00000498414.5 ENST00000498637.5 ENST00000550581.3 ENST00000550618.2 ENST00000551862.5 ENST00000552136.5 ENST00000552257.4 ENST00000552950.4 |
||
| CDS TCA 72 bp | GTTGGGGGCAGAGGCTCTCATCCCGGATCTTCCGCTTaGCGGCCTGGAGCTGCTTGGCAATTTCCACCATAC | + |
|
Preference number: 6 (lower is better) Translates to: VGGRGSHPGSSA*RPGAAWQFPPY Trigger: GTATGGTGGAAATTGCCAAGCAGCTCCAGGCCGTCAAGCGGAAGATCCGGGATGAGAGCCTCTGCCCCCAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000550581.3 ENST00000550618.2 ENST00000551862.5 ENST00000552136.5 ENST00000552257.4 ENST00000552950.4 |
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| CDS CAA 90 bp | GCCTCATGGTGTTGGGGGCAGAGGCTCTCATCCCGGATCTTCCGCTaGACGGCCTGGAGCTGCTTGGCAATTTCCACCATACTGCCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: ASWCWGQRLSSRIFR*TAWSCLAISTILPS Trigger: ACTAGGCAGTATGGTGGAAATTGCCAAGCAGCTCCAGGCCGTCAAGCGGAAGATCCGGGATGAGAGCCTCTGCCCCCAACACCATGAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000550581.3 ENST00000550618.2 ENST00000551862.5 ENST00000552136.5 ENST00000552257.4 ENST00000552950.4 |
||
| CDS CAA 90 bp | GTACTTTTGACATCCTTAAGCATCTCGAAGCCTGACTGTAAGCACTaGCCCTCCACCTCGGCAGCCAAGTGGGCCAGGTCCCGGCGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VLLTSLSISKPDCKH*PSTSAAKWARSRRL Trigger: CAAGCGCCGGGACCTGGCCCACTTGGCTGCCGAGGTGGAGGGCAAGTGCTTACAGTCAGGCTTCGAGATGCTTAAGGATGTCAAAAGTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000550581.3 ENST00000550618.2 ENST00000551862.5 ENST00000552136.5 ENST00000552257.4 ENST00000552950.4 |
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| CDS CCA 72 bp | AAATGCCCGGGATCATTGAGGAAGCGTTGGCTGCGCTaGCATGTTAGGCAGGTCTGTACGGTCCAGCGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: KCPGSLRKRWLR*HVRQVCTVQRC Trigger: ACAGCGCTGGACCGTACAGACCTGCCTAACATGCCAGCGCAGCCAACGCTTCCTCAATGATCCCGGGCATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 62 transcripts: ENST00000376642.8 ENST00000411515.6 ENST00000411784.6 ENST00000412659.6 ENST00000413228.5 ENST00000414187.6 ENST00000415583.6 ENST00000416977.6 ENST00000418043.6 ENST00000422320.5 ENST00000422720.2 ENST00000424616.6 ENST00000425575.2 ENST00000427637.2 ENST00000428040.6 ENST00000430819.6 ENST00000430900.6 ENST00000433076.6 ENST00000434282.6 ENST00000435318.2 ENST00000436442.2 ENST00000437470.2 ENST00000439624.5 ENST00000439797.2 ENST00000442966.7 ENST00000452262.5 ENST00000455025.6 ENST00000456870.6 ENST00000460847.1 ENST00000461233.5 ENST00000464725.5 ENST00000465345.5 ENST00000465470.5 ENST00000467844.1 ENST00000468883.5 ENST00000470122.1 ENST00000471153.5 ENST00000472865.5 ENST00000472882.5 ENST00000473266.1 ENST00000476358.5 ENST00000478784.5 ENST00000482357.5 ENST00000482830.1 ENST00000484944.5 ENST00000488929.5 ENST00000489124.5 ENST00000490158.5 ENST00000490988.1 ENST00000491477.5 ENST00000491758.5 ENST00000492100.1 ENST00000493641.1 ENST00000496417.5 ENST00000498414.5 ENST00000498637.5 ENST00000550581.3 ENST00000550618.2 ENST00000551862.5 ENST00000552136.5 ENST00000552257.4 ENST00000552950.4 |
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| CDS CCA 72 bp | CCCCAGAGTAAATGCCCGGGATCATTGAGGAAGCGTTaGCTGCGCTGGCATGTTAGGCAGGTCTGTACGGTC | + |
|
Preference number: 6 (lower is better) Translates to: PQSKCPGSLRKR*LRWHVRQVCTV Trigger: GACCGTACAGACCTGCCTAACATGCCAGCGCAGCCAACGCTTCCTCAATGATCCCGGGCATTTACTCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 62 transcripts: ENST00000376642.8 ENST00000411515.6 ENST00000411784.6 ENST00000412659.6 ENST00000413228.5 ENST00000414187.6 ENST00000415583.6 ENST00000416977.6 ENST00000418043.6 ENST00000422320.5 ENST00000422720.2 ENST00000424616.6 ENST00000425575.2 ENST00000427637.2 ENST00000428040.6 ENST00000430819.6 ENST00000430900.6 ENST00000433076.6 ENST00000434282.6 ENST00000435318.2 ENST00000436442.2 ENST00000437470.2 ENST00000439624.5 ENST00000439797.2 ENST00000442966.7 ENST00000452262.5 ENST00000455025.6 ENST00000456870.6 ENST00000460847.1 ENST00000461233.5 ENST00000464725.5 ENST00000465345.5 ENST00000465470.5 ENST00000467844.1 ENST00000468883.5 ENST00000470122.1 ENST00000471153.5 ENST00000472865.5 ENST00000472882.5 ENST00000473266.1 ENST00000476358.5 ENST00000478784.5 ENST00000482357.5 ENST00000482830.1 ENST00000484944.5 ENST00000488929.5 ENST00000489124.5 ENST00000490158.5 ENST00000490988.1 ENST00000491477.5 ENST00000491758.5 ENST00000492100.1 ENST00000493641.1 ENST00000496417.5 ENST00000498414.5 ENST00000498637.5 ENST00000550581.3 ENST00000550618.2 ENST00000551862.5 ENST00000552136.5 ENST00000552257.4 ENST00000552950.4 |
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| CDS CCA 72 bp | AGGATAGTGGTCGCCGCAAGACGAGCCGCTTCGCAATaGTCCTCTCAGTGTAGCAGTAAAACCTCGCCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: RIVVAARRAASQ*SSQCSSKTSPA Trigger: CGCTGGCGAGGTTTTACTGCTACACTGAGAGGACCATTGCGAAGCGGCTCGTCTTGCGGCGACCACTATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000411515.6 ENST00000412659.6 ENST00000425575.2 ENST00000430819.6 ENST00000433076.6 ENST00000455025.6 ENST00000456870.6 |
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| CDS CAA 72 bp | TCAGGCCTGTCTCCCCAGAGTAAATGCCCGGGATCATaGAGGAAGCGTTGGCTGCGCTGGCATGTTAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SGLSPQSKCPGS*RKRWLRWHVRQ Trigger: CTGCCTAACATGCCAGCGCAGCCAACGCTTCCTCAATGATCCCGGGCATTTACTCTGGGGAGACAGGCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 62 transcripts: ENST00000376642.8 ENST00000411515.6 ENST00000411784.6 ENST00000412659.6 ENST00000413228.5 ENST00000414187.6 ENST00000415583.6 ENST00000416977.6 ENST00000418043.6 ENST00000422320.5 ENST00000422720.2 ENST00000424616.6 ENST00000425575.2 ENST00000427637.2 ENST00000428040.6 ENST00000430819.6 ENST00000430900.6 ENST00000433076.6 ENST00000434282.6 ENST00000435318.2 ENST00000436442.2 ENST00000437470.2 ENST00000439624.5 ENST00000439797.2 ENST00000442966.7 ENST00000452262.5 ENST00000455025.6 ENST00000456870.6 ENST00000460847.1 ENST00000461233.5 ENST00000464725.5 ENST00000465345.5 ENST00000465470.5 ENST00000467844.1 ENST00000468883.5 ENST00000470122.1 ENST00000471153.5 ENST00000472865.5 ENST00000472882.5 ENST00000473266.1 ENST00000476358.5 ENST00000478784.5 ENST00000482357.5 ENST00000482830.1 ENST00000484944.5 ENST00000488929.5 ENST00000489124.5 ENST00000490158.5 ENST00000490988.1 ENST00000491477.5 ENST00000491758.5 ENST00000492100.1 ENST00000493641.1 ENST00000496417.5 ENST00000498414.5 ENST00000498637.5 ENST00000550581.3 ENST00000550618.2 ENST00000551862.5 ENST00000552136.5 ENST00000552257.4 ENST00000552950.4 |
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| CDS CAA 90 bp | CAGAGGCTCTCATCCCGGATCTTCCGCTTGACGGCCTGGAGCTGCTaGGCAATTTCCACCATACTGCCTAGTTGCCGATTAGGTCGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: QRLSSRIFRLTAWSC*AISTILPSCRLGRR Trigger: TCTCCGACCTAATCGGCAACTAGGCAGTATGGTGGAAATTGCCAAGCAGCTCCAGGCCGTCAAGCGGAAGATCCGGGATGAGAGCCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000550581.3 ENST00000550618.2 ENST00000551862.5 ENST00000552136.5 ENST00000552257.4 ENST00000552950.4 |
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| CDS CCA 72 bp | CAGAGGCTCTCATCCCGGATCTTCCGCTTGACGGCCTaGAGCTGCTTGGCAATTTCCACCATACTGCCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: QRLSSRIFRLTA*SCLAISTILPS Trigger: ACTAGGCAGTATGGTGGAAATTGCCAAGCAGCTCCAGGCCGTCAAGCGGAAGATCCGGGATGAGAGCCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000550581.3 ENST00000550618.2 ENST00000551862.5 ENST00000552136.5 ENST00000552257.4 ENST00000552950.4 |
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| CDS CCA 72 bp | AGTAGCCAGGACGCAAGGGTAGAAGGTGAAACGCCTTaGTGTGTCAGGGAGATCCCGGAGTCTTGTCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SSQDARVEGETP*CVREIPESCLH Trigger: GTGGAGACAAGACTCCGGGATCTCCCTGACACACCAAGGCGTTTCACCTTCTACCCTTGCGTCCTGGCTACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000550581.3 ENST00000550618.2 ENST00000551862.5 ENST00000552136.5 ENST00000552257.4 ENST00000552950.4 |
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| CDS TCA 72 bp | AAGGGAAGTCCCTCTCTAGGTCCTCCCACCAGCGGGTaGTGCAAGCTTTGCAGAAGTTGTGCCCACACTCAA | + |
|
Preference number: 6 (lower is better) Translates to: KGSPSLGPPTSG*CKLCRSCAHTQ Trigger: TTGAGTGTGGGCACAACTTCTGCAAAGCTTGCATCACCCGCTGGTGGGAGGACCTAGAGAGGGACTTCCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000550581.3 ENST00000550618.2 ENST00000551862.5 ENST00000552136.5 ENST00000552257.4 ENST00000552950.4 |
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| CDS CAA 72 bp | CCTCAGGAAGGCGGTCTGAAATGGAGTGGGCTGTGTTaGGCAAGGGTTGTAGTGGTTTGGAATCTGCTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PQEGGLKWSGLC*ARVVVVWNLLG Trigger: GCCAAGCAGATTCCAAACCACTACAACCCTTGCCAAACACAGCCCACTCCATTTCAGACCGCCTTCCTGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 55 transcripts: ENST00000376642.8 ENST00000411515.6 ENST00000411784.6 ENST00000412659.6 ENST00000413228.5 ENST00000414187.6 ENST00000416977.6 ENST00000418043.6 ENST00000422320.5 ENST00000424616.6 ENST00000425575.2 ENST00000428040.6 ENST00000430819.6 ENST00000430900.6 ENST00000433076.6 ENST00000434282.6 ENST00000439624.5 ENST00000442966.7 ENST00000452262.5 ENST00000455025.6 ENST00000456870.6 ENST00000460847.1 ENST00000461233.5 ENST00000464725.5 ENST00000465345.5 ENST00000465470.5 ENST00000467844.1 ENST00000468883.5 ENST00000470122.1 ENST00000471153.5 ENST00000472865.5 ENST00000472882.5 ENST00000473266.1 ENST00000476358.5 ENST00000478784.5 ENST00000482357.5 ENST00000482830.1 ENST00000484944.5 ENST00000488929.5 ENST00000489124.5 ENST00000490158.5 ENST00000490988.1 ENST00000491477.5 ENST00000491758.5 ENST00000492100.1 ENST00000493641.1 ENST00000496417.5 ENST00000498414.5 ENST00000498637.5 ENST00000550581.3 ENST00000550618.2 ENST00000551862.5 ENST00000552136.5 ENST00000552257.4 ENST00000552950.4 |
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| CDS CAA 72 bp | CAAGAACTGGCCTGTTTCCCCCTCCAGTCTCATGTTTaGCCCTCCTACCTCAAACTCCAGCCTCCTGAACTC | + |
|
Preference number: 6 (lower is better) Translates to: QELACFPLQSHV*PSYLKLQPPEL Trigger: GAGTTCAGGAGGCTGGAGTTTGAGGTAGGAGGGCAAAACATGAGACTGGAGGGGGAAACAGGCCAGTTCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000467844.1 ENST00000468883.5 ENST00000472865.5 ENST00000476358.5 ENST00000478784.5 ENST00000488929.5 ENST00000498414.5 |
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| CDS CAA 90 bp | GCATTTTCTCCTCAGGAAGGCGGTCTGAAATGGAGTGGGCTGTGTTaGGCAAGGGTTGTAGTGGTTTGGAATCTGCTTGGCTCCCGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: AFSPQEGGLKWSGLC*ARVVVVWNLLGSRA Trigger: AGCTCGGGAGCCAAGCAGATTCCAAACCACTACAACCCTTGCCAAACACAGCCCACTCCATTTCAGACCGCCTTCCTGAGGAGAAAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 55 transcripts: ENST00000376642.8 ENST00000411515.6 ENST00000411784.6 ENST00000412659.6 ENST00000413228.5 ENST00000414187.6 ENST00000416977.6 ENST00000418043.6 ENST00000422320.5 ENST00000424616.6 ENST00000425575.2 ENST00000428040.6 ENST00000430819.6 ENST00000430900.6 ENST00000433076.6 ENST00000434282.6 ENST00000439624.5 ENST00000442966.7 ENST00000452262.5 ENST00000455025.6 ENST00000456870.6 ENST00000460847.1 ENST00000461233.5 ENST00000464725.5 ENST00000465345.5 ENST00000465470.5 ENST00000467844.1 ENST00000468883.5 ENST00000470122.1 ENST00000471153.5 ENST00000472865.5 ENST00000472882.5 ENST00000473266.1 ENST00000476358.5 ENST00000478784.5 ENST00000482357.5 ENST00000482830.1 ENST00000484944.5 ENST00000488929.5 ENST00000489124.5 ENST00000490158.5 ENST00000490988.1 ENST00000491477.5 ENST00000491758.5 ENST00000492100.1 ENST00000493641.1 ENST00000496417.5 ENST00000498414.5 ENST00000498637.5 ENST00000550581.3 ENST00000550618.2 ENST00000551862.5 ENST00000552136.5 ENST00000552257.4 ENST00000552950.4 |
||
| CDS CAA 90 bp | CTCTCTAGGTCCTCCCACCAGCGGGTGATGCAAGCTTTGCAGAAGTaGTGCCCACACTCAATGATGACAGGTTCCTTCAGATACTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LSRSSHQRVMQALQK*CPHSMMTGSFRYSR Trigger: CCTGGAGTATCTGAAGGAACCTGTCATCATTGAGTGTGGGCACAACTTCTGCAAAGCTTGCATCACCCGCTGGTGGGAGGACCTAGAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000550581.3 ENST00000550618.2 ENST00000551862.5 ENST00000552136.5 ENST00000552257.4 ENST00000552950.4 |
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| CDS CAA 72 bp | CCTCAGGAAGGCGGTCTGAAATGGAGTGGGCTGTGTTaGGCAAGGGTTGTAGTGGTTTGGAATCTCTCACCT | + |
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Preference number: 6 (lower is better) Translates to: PQEGGLKWSGLC*ARVVVVWNLSP Trigger: AGGTGAGAGATTCCAAACCACTACAACCCTTGCCAAACACAGCCCACTCCATTTCAGACCGCCTTCCTGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENST00000415583.6 ENST00000422720.2 ENST00000427637.2 ENST00000435318.2 ENST00000436442.2 ENST00000437470.2 ENST00000439797.2 |
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| CDS CAA 90 bp | GCATTTTCTCCTCAGGAAGGCGGTCTGAAATGGAGTGGGCTGTGTTaGGCAAGGGTTGTAGTGGTTTGGAATCTCTCACCTGCTTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: AFSPQEGGLKWSGLC*ARVVVVWNLSPAWL Trigger: GAGCCAAGCAGGTGAGAGATTCCAAACCACTACAACCCTTGCCAAACACAGCCCACTCCATTTCAGACCGCCTTCCTGAGGAGAAAATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENST00000415583.6 ENST00000422720.2 ENST00000427637.2 ENST00000435318.2 ENST00000436442.2 ENST00000437470.2 ENST00000439797.2 |
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| CDS CAA 90 bp | ACAAGACTTCAAGAACTGGCCTGTTTCCCCCTCCAGTCTCATGTTTaGCCCTCCTACCTCAAACTCCAGCCTCCTGAACTCTCATTTCTT | + |
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Preference number: 6 (lower is better) Translates to: TRLQELACFPLQSHV*PSYLKLQPPELSFL Trigger: AAGAAATGAGAGTTCAGGAGGCTGGAGTTTGAGGTAGGAGGGCAAAACATGAGACTGGAGGGGGAAACAGGCCAGTTCTTGAAGTCTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENST00000467844.1 ENST00000468883.5 ENST00000472865.5 ENST00000476358.5 ENST00000478784.5 ENST00000488929.5 ENST00000498414.5 |
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| CDS GCA 72 bp | AAAGACTGTCCACGTTTAGAAGTAACGGTCTCTTGCTaGCAGTTTTGCCTCCAGTGTTTTTCAGTAGGTATC | + |
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Preference number: 6 (lower is better) Translates to: KDCPRLEVTVSC*QFCLQCFSVGI Trigger: GATACCTACTGAAAAACACTGGAGGCAAAACTGGCAGCAAGAGACCGTTACTTCTAAACGTGGACAGTCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENST00000467844.1 ENST00000468883.5 ENST00000472865.5 ENST00000476358.5 ENST00000478784.5 ENST00000488929.5 ENST00000498414.5 |
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| CDS CCA 72 bp | CCACAAAGCCGAACAACATCTATTATTGTGCATGGGTaGGGTTGCCTCTTAAAAGTTATTATTTATTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: PQSRTTSIIVHG*GCLLKVIIYCP Trigger: TGGGCAATAAATAATAACTTTTAAGAGGCAACCCCACCCATGCACAATAATAGATGTTGTTCGGCTTTGTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 14 transcripts: ENST00000463825.5 ENST00000466327.5 ENST00000467113.5 ENST00000467844.1 ENST00000468883.5 ENST00000472865.5 ENST00000473319.5 ENST00000476358.5 ENST00000478784.5 ENST00000480480.1 ENST00000484136.5 ENST00000488929.5 ENST00000489296.5 ENST00000498414.5 |
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