Pregenerated sensors for RPLP2 (Homo sapiens)
Ensembl gene IDs: ENSG00000177600Ensembl transcript IDs: ENST00000524867.1, ENST00000527517.1, ENST00000530797.5
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TCCTCGGGTGAGGCTTCTAGGGTGCTCTGGTCCACAAGCGAAACCTaGCAGGCCACAGATGGACCGGCAGGGATTAGGATGGACCATGAA | + |
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Preference number: 5 (lower is better) Translates to: SSGEASRVLWSTSET*QATDGPAGIRMDHE Trigger: TTCATGGTCCATCCTAATCCCTGCCGGTCCATCTGTGGCCTGCCAGGTTTCGCTTGTGGACCAGAGCACCCTAGAAGCCTCACCCGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000524867.1 |
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| CDS GCA 90 bp | TATCCAGGGACTTGCCTTCTAGGAATTAGGCCCACACTGCCTGCCTaGCCAATTTCCCCACCTCCACCCTCAGAGGTCCACTGGACAGAC | + |
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Preference number: 5 (lower is better) Translates to: YPGTCLLGIRPTLPA*PISPPPPSEVHWTD Trigger: GTCTGTCCAGTGGACCTCTGAGGGTGGAGGTGGGGAAATTGGGCAGGCAGGCAGTGTGGGCCTAATTCCTAGAAGGCAAGTCCCTGGATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527517.1 |
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| CDS TCA 90 bp | CACATCTCTGGCCACAACGCTGTGTTCATGGCTTGGCCCGTTTGCTaGGCTGGCCCTGTCGTGGTCACATGCATGGAAGACAAGAACAGC | + |
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Preference number: 5 (lower is better) Translates to: HISGHNAVFMAWPVC*AGPVVVTCMEDKNS Trigger: GCTGTTCTTGTCTTCCATGCATGTGACCACGACAGGGCCAGCTCAGCAAACGGGCCAAGCCATGAACACAGCGTTGTGGCCAGAGATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527517.1 |
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| CDS CCA 90 bp | GGAGGCTGTTCCACAGGGAAGTTAGATGGCACCAGAGATGGCACATaGCACCCAACATATCTGGACCCACCATATGCCAGTGTCTCCCGT | + |
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Preference number: 5 (lower is better) Translates to: GGCSTGKLDGTRDGT*HPTYLDPPYASVSR Trigger: ACGGGAGACACTGGCATATGGTGGGTCCAGATATGTTGGGTGCCATGTGCCATCTCTGGTGCCATCTAACTTCCCTGTGGAACAGCCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527517.1 |
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| CDS CCA 90 bp | CAGCCTGGGAGGCTGTTCCACAGGGAAGTTAGATGGCACCAGAGATaGCACATGGCACCCAACATATCTGGACCCACCATATGCCAGTGT | + |
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Preference number: 5 (lower is better) Translates to: QPGRLFHREVRWHQR*HMAPNISGPTICQC Trigger: ACACTGGCATATGGTGGGTCCAGATATGTTGGGTGCCATGTGCCATCTCTGGTGCCATCTAACTTCCCTGTGGAACAGCCTCCCAGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527517.1 |
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| CDS CCA 90 bp | CAAGCGAAACCTGGCAGGCCACAGATGGACCGGCAGGGATTAGGATaGACCATGAAAACAAACGAAAGCCCGTCCACATCAACTCACCCT | + |
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Preference number: 5 (lower is better) Translates to: QAKPGRPQMDRQGLG*TMKTNESPSTSTHP Trigger: AGGGTGAGTTGATGTGGACGGGCTTTCGTTTGTTTTCATGGTCCATCCTAATCCCTGCCGGTCCATCTGTGGCCTGCCAGGTTTCGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524867.1 |
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| CDS GCA 72 bp | CCCCGGGCCCGGTCACCACACTCACGCGGCGGCGTCTaGGGCGGAGGCGGCGGAGAAGTCTCACGCGTGCGA | + |
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Preference number: 6 (lower is better) Translates to: PRARSPHSRGGV*GGGGGEVSRVR Trigger: TCGCACGCGTGAGACTTCTCCGCCGCCTCCGCCGCAGACGCCGCCGCGTGAGTGTGGTGACCGGGCCCGGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530797.5 |
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| CDS TCA 72 bp | GGCCACAACGCTGTGTTCATGGCTTGGCCCGTTTGCTaGGCTGGCCCTGTCGTGGTCACATGCATGGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: GHNAVFMAWPVC*AGPVVVTCMED Trigger: GTCTTCCATGCATGTGACCACGACAGGGCCAGCTCAGCAAACGGGCCAAGCCATGAACACAGCGTTGTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527517.1 |
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| CDS CAA 72 bp | CTCTGGCCACAACGCTGTGTTCATGGCTTGGCCCGTTaGCTGAGCTGGCCCTGTCGTGGTCACATGCATGGA | + |
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Preference number: 6 (lower is better) Translates to: LWPQRCVHGLAR*LSWPCRGHMHG Trigger: TCCATGCATGTGACCACGACAGGGCCAGCTCAGCAAACGGGCCAAGCCATGAACACAGCGTTGTGGCCAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527517.1 |
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| CDS GCA 72 bp | ACTTGCCTTCTAGGAATTAGGCCCACACTGCCTGCCTaGCCAATTTCCCCACCTCCACCCTCAGAGGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: TCLLGIRPTLPA*PISPPPPSEVH Trigger: GTGGACCTCTGAGGGTGGAGGTGGGGAAATTGGGCAGGCAGGCAGTGTGGGCCTAATTCCTAGAAGGCAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527517.1 |
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| CDS GCA 72 bp | TGGCACATGGCACCCAACATATCTGGACCCACCATATaGCAGTGTCTCCCGTTCTTCCTGAACACTCCCTCC | + |
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Preference number: 6 (lower is better) Translates to: WHMAPNISGPTI*QCLPFFLNTPS Trigger: GGAGGGAGTGTTCAGGAAGAACGGGAGACACTGGCATATGGTGGGTCCAGATATGTTGGGTGCCATGTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527517.1 |
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| CDS CCA 72 bp | CCTGGCAGGCCACAGATGGACCGGCAGGGATTAGGATaGACCATGAAAACAAACGAAAGCCCGTCCACATCA | + |
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Preference number: 6 (lower is better) Translates to: PGRPQMDRQGLG*TMKTNESPSTS Trigger: TGATGTGGACGGGCTTTCGTTTGTTTTCATGGTCCATCCTAATCCCTGCCGGTCCATCTGTGGCCTGCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000524867.1 |
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| CDS CCA 72 bp | ATGGCACCAGAGATGGCACATGGCACCCAACATATCTaGACCCACCATATGCCAGTGTCTCCCGTTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: MAPEMAHGTQHI*THHMPVSPVLP Trigger: AGGAAGAACGGGAGACACTGGCATATGGTGGGTCCAGATATGTTGGGTGCCATGTGCCATCTCTGGTGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527517.1 |
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| CDS CCA 72 bp | TCCACAGGGAAGTTAGATGGCACCAGAGATGGCACATaGCACCCAACATATCTGGACCCACCATATGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: STGKLDGTRDGT*HPTYLDPPYAS Trigger: ACTGGCATATGGTGGGTCCAGATATGTTGGGTGCCATGTGCCATCTCTGGTGCCATCTAACTTCCCTGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527517.1 |
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