Pregenerated sensors for RPL9 (Homo sapiens)
Ensembl gene IDs: ENSG00000163682Ensembl transcript IDs: ENST00000449470.6, ENST00000511075.5, ENST00000514842.6, ENST00000642337.1, ENST00000644328.1, ENST00000645496.2, ENST00000645585.1, ENST00000645894.1
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GACCCATATTTCCCAACCTTTCGAGGATGTGATCTTACTTCACGTTaGTCCCATTCATCGCCTACAACCCCATCCGTTATTTCTGAGCAA | + |
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Preference number: 1 (lower is better) Translates to: DPYFPTFRGCDLTSR*SHSSPTTPSVISEQ Trigger: TTGCTCAGAAATAACGGATGGGGTTGTAGGCGATGAATGGGATCAACGTGAAGTAAGATCACATCCTCGAAAGGTTGGGAAATATGGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| 3UTR TCA 90 bp | AAATTTGTATCTAATGGACCCATATTTCCCAACCTTTCGAGGATGTaGTCTTACTTCACGTTGATCCCATTCATCGCCTACAACCCCATC | + |
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Preference number: 1 (lower is better) Translates to: KFVSNGPIFPNLSRM*SYFTLIPFIAYNPI Trigger: GATGGGGTTGTAGGCGATGAATGGGATCAACGTGAAGTAAGATCACATCCTCGAAAGGTTGGGAAATATGGGTCCATTAGATACAAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| 3UTR TCA 90 bp | GATGCTGTATCACTCTGTTCTACTCCTCAGCTGTTTCTCCACCAGTaGCTAAGACAACATTTGCCTTACCAAATATTCAAATTCATGCCT | + |
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Preference number: 1 (lower is better) Translates to: DAVSLCSTPQLFLHQ*LRQHLPYQIFKFMP Trigger: AGGCATGAATTTGAATATTTGGTAAGGCAAATGTTGTCTTAGTCACTGGTGGAGAAACAGCTGAGGAGTAGAACAGAGTGATACAGCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| 3UTR GCA 90 bp | TTGCCTGTCACTGGTACAATATTCCTCTTGCCTAAAATATATCCTTaGTATTCCTTCAAGAACCAGATTAAAGCTCCTTGTTCCACGAGG | + |
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Preference number: 1 (lower is better) Translates to: LPVTGTIFLLPKIYP*YSFKNQIKAPCSTR Trigger: CCTCGTGGAACAAGGAGCTTTAATCTGGTTCTTGAAGGAATAGCAAGGATATATTTTAGGCAAGAGGAATATTGTACCAGTGACAGGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| 3UTR GCA 90 bp | GATGAATGGCCTCATGTTTGCCTGTCACTGGTACAATATTCCTCTTaGCTAAAATATATCCTTGCTATTCCTTCAAGAACCAGATTAAAG | + |
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Preference number: 1 (lower is better) Translates to: DEWPHVCLSLVQYSS*LKYILAIPSRTRLK Trigger: CTTTAATCTGGTTCTTGAAGGAATAGCAAGGATATATTTTAGGCAAGAGGAATATTGTACCAGTGACAGGCAAACATGAGGCCATTCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGACCTGAAGGTAAGTGAAATTAGCCACACAGCTCAGCTGAGAGCATTCCAATCCAGCCTGGGCAACTaGGTAAGACATTGTAAGATC | + |
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Preference number: 2 (lower is better) Translates to: IDLKVSEISHTAQLRAFQSSLGN*VRHCKI Trigger: GATCTTACAATGTCTTACTCAGTTGCCCAGGCTGGA...TTGGAATGCTCTCAGCTGAGCTGTGTGGCTAATTTCACTTACCTTCAGGTCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| 3UTR-3UTR TCA 90 bp | GGATTATTGCTTGAGTCCAGTAGGTTGAAGTTACAGAGCTATGACTATGGCACTTGGGGGTCACCATGTTaGCCTAAGTCTAGTTATGGT | + |
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Preference number: 2 (lower is better) Translates to: GLLLESSRLKLQSYDYGTWGSPC*PKSSYG Trigger: ACCATAACTAGACTTAGGTCAACATGGTGACCCCCA...AGTGCCATAGTCATAGCTCTGTAACTTCAACCTACTGGACTCAAGCAATAATCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| 3UTR-3UTR GCA 90 bp | TGCTGTATCACTCTGTTCTACTCCTCAGCTGTTTCTCCACCAGTGACTAAGACAGAATGGCCTCATGTTTaGCTGTCACTGGTACAATAT | + |
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Preference number: 2 (lower is better) Translates to: CCITLFYSSAVSPPVTKTEWPHV*LSLVQY Trigger: ATATTGTACCAGTGACAGGCAAACATGAGGCCATTC...TGTCTTAGTCACTGGTGGAGAAACAGCTGAGGAGTAGAACAGAGTGATACAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| 3UTR-3UTR CCA 90 bp | ATAGACCTGAAGGTAAGTGAAATTAGCCACACAGCTCAGCTGAGAGCATTCCAAATGTTTGCCTGTCACTaGTACAATATTCCTCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: IDLKVSEISHTAQLRAFQMFACH*YNIPLA Trigger: GGCAAGAGGAATATTGTACCAGTGACAGGCAAACAT...TTGGAATGCTCTCAGCTGAGCTGTGTGGCTAATTTCACTTACCTTCAGGTCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGACCTGAAGGTAAGTGAAATTAGCCACACAGCTCAGCTGAGAGCATTCCAACCTTCTAATTCTAACTaGTGCTGTATCACTCTGTTC | + |
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Preference number: 2 (lower is better) Translates to: IDLKVSEISHTAQLRAFQPSNSN*CCITLF Trigger: GAACAGAGTGATACAGCATCAGTTAGAATTAGAAGG...TTGGAATGCTCTCAGCTGAGCTGTGTGGCTAATTTCACTTACCTTCAGGTCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGACCTGAAGGTAAGTGAAATTAGCCACACAGCTCAGCTGAGAGCATTCCAAATGGAAGTAAATGGCTaGGGTAAAGGACAAGATTAT | + |
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Preference number: 2 (lower is better) Translates to: IDLKVSEISHTAQLRAFQMEVNG*GKGQDY Trigger: ATAATCTTGTCCTTTACCTCAGCCATTTACTTCCAT...TTGGAATGCTCTCAGCTGAGCTGTGTGGCTAATTTCACTTACCTTCAGGTCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGACCTGAAGGTAAGTGAAATTAGCCACACAGCTCAGCTGAGAGCATTCCAAGCAGTTTCCATCAAATaGGATGTAGAATTCACAAAG | + |
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Preference number: 2 (lower is better) Translates to: IDLKVSEISHTAQLRAFQAVSIK*DVEFTK Trigger: CTTTGTGAATTCTACATCTCATTTGATGGAAACTGC...TTGGAATGCTCTCAGCTGAGCTGTGTGGCTAATTTCACTTACCTTCAGGTCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| 3UTR-3UTR TCA 90 bp | GGATTATTGCTTGAGTCCAGTAGGTTGAAGTTACAGAGCTATGACTATGGCACTGACCATACCTTACAATaGAGGTACTTAGTACGTTTT | + |
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Preference number: 2 (lower is better) Translates to: GLLLESSRLKLQSYDYGTDHTLQ*RYLVRF Trigger: AAAACGTACTAAGTACCTTCATTGTAAGGTATGGTC...AGTGCCATAGTCATAGCTCTGTAACTTCAACCTACTGGACTCAAGCAATAATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| 3UTR-3UTR GCA 90 bp | ATAGACCTGAAGGTAAGTGAAATTAGCCACACAGCTCAGCTGAGAGCATTCCAACCTAAAATATATCCTTaGTATTCCTTCAAGAACCAG | + |
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Preference number: 2 (lower is better) Translates to: IDLKVSEISHTAQLRAFQPKIYP*YSFKNQ Trigger: CTGGTTCTTGAAGGAATAGCAAGGATATATTTTAGG...TTGGAATGCTCTCAGCTGAGCTGTGTGGCTAATTTCACTTACCTTCAGGTCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| 3UTR TCA 72 bp | TTCCCAACCTTTCGAGGATGTGATCTTACTTCACGTTaGTCCCATTCATCGCCTACAACCCCATCCGTTATT | + |
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Preference number: 3 (lower is better) Translates to: FPTFRGCDLTSR*SHSSPTTPSVI Trigger: AATAACGGATGGGGTTGTAGGCGATGAATGGGATCAACGTGAAGTAAGATCACATCCTCGAAAGGTTGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| 3UTR TCA 72 bp | TCTAATGGACCCATATTTCCCAACCTTTCGAGGATGTaGTCTTACTTCACGTTGATCCCATTCATCGCCTAC | + |
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Preference number: 3 (lower is better) Translates to: SNGPIFPNLSRM*SYFTLIPFIAY Trigger: GTAGGCGATGAATGGGATCAACGTGAAGTAAGATCACATCCTCGAAAGGTTGGGAAATATGGGTCCATTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| 3UTR TCA 72 bp | GATGTAGAATTCACAAAGGTTTGGGGGTCACCATGTTaGCCTAAGTCTAGTTATGGTGGCCTTGTACCATAT | + |
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Preference number: 3 (lower is better) Translates to: DVEFTKVWGSPC*PKSSYGGLVPY Trigger: ATATGGTACAAGGCCACCATAACTAGACTTAGGTCAACATGGTGACCCCCAAACCTTTGTGAATTCTACATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| 3UTR TCA 72 bp | TCACTCTGTTCTACTCCTCAGCTGTTTCTCCACCAGTaGCTAAGACAACATTTGCCTTACCAAATATTCAAA | + |
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Preference number: 3 (lower is better) Translates to: SLCSTPQLFLHQ*LRQHLPYQIFK Trigger: TTTGAATATTTGGTAAGGCAAATGTTGTCTTAGTCACTGGTGGAGAAACAGCTGAGGAGTAGAACAGAGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| 3UTR TCA 72 bp | ATCCCATTCATCGCCTACAACCCCATCCGTTATTTCTaGGCAAATCCGAGATTTATGATTTCCTCCAAATTT | + |
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Preference number: 3 (lower is better) Translates to: IPFIAYNPIRYF*ANPRFMISSKF Trigger: AAATTTGGAGGAAATCATAAATCTCGGATTTGCTCAGAAATAACGGATGGGGTTGTAGGCGATGAATGGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| 3UTR TCA 72 bp | TTAAATTTTGCCTTAGAAATTGCAGTTTCCATCAAATaGGATGTAGAATTCACAAAGGTTTGGGGGTCACCA | + |
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Preference number: 3 (lower is better) Translates to: LNFALEIAVSIK*DVEFTKVWGSP Trigger: TGGTGACCCCCAAACCTTTGTGAATTCTACATCTCATTTGATGGAAACTGCAATTTCTAAGGCAAAATTTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| 3UTR TCA 72 bp | ACTTTTTCTGATAAAGTACCTGACCATACCTTACAATaGAGGTACTTAGTACGTTTTCCTGACGCATTTGAT | + |
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Preference number: 3 (lower is better) Translates to: TFSDKVPDHTLQ*RYLVRFPDAFD Trigger: ATCAAATGCGTCAGGAAAACGTACTAAGTACCTTCATTGTAAGGTATGGTCAGGTACTTTATCAGAAAAAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| 3UTR TCA 72 bp | TACTTAGTACGTTTTCCTGACGCATTTGATCAAGGATaGATGTTAAATTTTGCCTTAGAAATTGCAGTTTCC | + |
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Preference number: 3 (lower is better) Translates to: YLVRFPDAFDQG*MLNFALEIAVS Trigger: GGAAACTGCAATTTCTAAGGCAAAATTTAACATTCATCCTTGATCAAATGCGTCAGGAAAACGTACTAAGTA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS-3UTR TCA 90 bp | ATAGACCTGAAGGTAAGTGAAATTAGCCACACAGCTCAGCTGAGAGCATTCCAACACAAACACTGGGGGTaGGGCCGACGCAAGGCCCGT | + |
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Preference number: 4 (lower is better) Translates to: IDLKVSEISHTAQLRAFQHKHWG*GRRKAR Trigger: ACGGGCCTTGCGTCGGCCTCACCCCCAGTGTTTGTG...TTGGAATGCTCTCAGCTGAGCTGTGTGGCTAATTTCACTTACCTTCAGGTCTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS-3UTR CCA 90 bp | ATAGACCTGAAGGTAAGTGAAATTAGCCACACAGCTCAGCTGAGAGCATTCCAAGTAGTTCCAGCCCTCTaGGAGGCCAAAGAGGAACAC | + |
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Preference number: 4 (lower is better) Translates to: IDLKVSEISHTAQLRAFQVVPAL*EAKEEH Trigger: GTGTTCCTCTTTGGCCTCCCAGAGGGCTGGAACTAC...TTGGAATGCTCTCAGCTGAGCTGTGTGGCTAATTTCACTTACCTTCAGGTCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS-3UTR GCA 90 bp | CTATATGCAATGATGAATGGCCTCATGTTTGCCTGTCACTGGTACAATATTCCTACTCCTACTGGAGACTaGCAGGCGGAAGTTCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: LYAMMNGLMFACHWYNIPTPTGD*QAEVPD Trigger: GTCTGGAACTTCCGCCTGGCAGTCTCCAGTAGGAGT...AGGAATATTGTACCAGTGACAGGCAAACATGAGGCCATTCATCATTGCATATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS-3UTR TCA 90 bp | CTATATGCAATGATGAATGGCCTCATGTTTGCCTGTCACTGGTACAATATTCCTGCCACACAGCTCAGCTaGGAGCATTCCAAAGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: LYAMMNGLMFACHWYNIPATQLS*EHSKGK Trigger: TTTCCCTTTGGAATGCTCTCAGCTGAGCTGTGTGGC...AGGAATATTGTACCAGTGACAGGCAAACATGAGGCCATTCATCATTGCATATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS-3UTR TCA 90 bp | GGATTATTGCTTGAGTCCAGTAGGTTGAAGTTACAGAGCTATGACTATGGCACTTCCAGCCTGGGCAACTaGGTAAGACATTGTAAGATC | + |
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Preference number: 4 (lower is better) Translates to: GLLLESSRLKLQSYDYGTSSLGN*VRHCKI Trigger: GATCTTACAATGTCTTACTCAGTTGCCCAGGCTGGA...AGTGCCATAGTCATAGCTCTGTAACTTCAACCTACTGGACTCAAGCAATAATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS-3UTR TCA 90 bp | TGCTGTATCACTCTGTTCTACTCCTCAGCTGTTTCTCCACCAGTGACTAAGACACCCATCCGTTATTTCTaGGCAAATCCGAGATTTATG | + |
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Preference number: 4 (lower is better) Translates to: CCITLFYSSAVSPPVTKTPIRYF*ANPRFM Trigger: CATAAATCTCGGATTTGCTCAGAAATAACGGATGGG...TGTCTTAGTCACTGGTGGAGAAACAGCTGAGGAGTAGAACAGAGTGATACAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS-3UTR CCA 90 bp | ATTCATGCCTCAGCAAATTTAGACACTTTCAGGGTATTCCTAAAGTTCTATATGGAGCTCCACTCCTACTaGAGACTGCCAGGCGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: IHASANLDTFRVFLKFYMELHSY*RLPGGS Trigger: ACTTCCGCCTGGCAGTCTCCAGTAGGAGTGGAGCTC...CATATAGAACTTTAGGAATACCCTGAAAGTGTCTAAATTTGCTGAGGCATGAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS-3UTR CCA 90 bp | ATAGACCTGAAGGTAAGTGAAATTAGCCACACAGCTCAGCTGAGAGCATTCCAACGGCTGCAGGTACAATaGGGAGGCTATTTTAAAAAG | + |
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Preference number: 4 (lower is better) Translates to: IDLKVSEISHTAQLRAFQRLQVQ*GGYFKK Trigger: CTTTTTAAAATAGCCTCCCCATTGTACCTGCAGCCG...TTGGAATGCTCTCAGCTGAGCTGTGTGGCTAATTTCACTTACCTTCAGGTCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| 3UTR CAA 72 bp | TCCTTGCTACTAAGGAGGCTGAAGCAGGTAGGATTATaGCTTGAGTCCAGTAGGTTGAAGTTACAGAGCTAT | + |
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Preference number: 4 (lower is better) Translates to: SLLLRRLKQVGL*LESSRLKLQSY Trigger: ATAGCTCTGTAACTTCAACCTACTGGACTCAAGCAATAATCCTACCTGCTTCAGCCTCCTTAGTAGCAAGGA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS-3UTR TCA 90 bp | CTATATGCAATGATGAATGGCCTCATGTTTGCCTGTCACTGGTACAATATTCCTTGGGGGTCACCATGTTaGCCTAAGTCTAGTTATGGT | + |
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Preference number: 4 (lower is better) Translates to: LYAMMNGLMFACHWYNIPWGSPC*PKSSYG Trigger: ACCATAACTAGACTTAGGTCAACATGGTGACCCCCA...AGGAATATTGTACCAGTGACAGGCAAACATGAGGCCATTCATCATTGCATATAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS-3UTR TCA 90 bp | GGATTATTGCTTGAGTCCAGTAGGTTGAAGTTACAGAGCTATGACTATGGCACTGATCTTACTTCACGTTaGTCCCATTCATCGCCTACA | + |
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Preference number: 4 (lower is better) Translates to: GLLLESSRLKLQSYDYGTDLTSR*SHSSPT Trigger: TGTAGGCGATGAATGGGATCAACGTGAAGTAAGATC...AGTGCCATAGTCATAGCTCTGTAACTTCAACCTACTGGACTCAAGCAATAATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS-3UTR TCA 90 bp | CTATATGCAATGATGAATGGCCTCATGTTTGCCTGTCACTGGTACAATATTCCTGACAGGAGAGGAAGATaGCCAGTTGACTGTCACAAT | + |
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Preference number: 4 (lower is better) Translates to: LYAMMNGLMFACHWYNIPDRRGR*PVDCHN Trigger: ATTGTGACAGTCAACTGGTCATCTTCCTCTCCTGTC...AGGAATATTGTACCAGTGACAGGCAAACATGAGGCCATTCATCATTGCATATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| 3UTR CAA 72 bp | CTGAAGCAGGTAGGATTATTGCTTGAGTCCAGTAGGTaGAAGTTACAGAGCTATGACTATGGCACTGTATTC | + |
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Preference number: 4 (lower is better) Translates to: LKQVGLLLESSR*KLQSYDYGTVF Trigger: GAATACAGTGCCATAGTCATAGCTCTGTAACTTCAACCTACTGGACTCAAGCAATAATCCTACCTGCTTCAG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS-3UTR TCA 90 bp | ATAGACCTGAAGGTAAGTGAAATTAGCCACACAGCTCAGCTGAGAGCATTCCAAAGATTATTGAGACCATaGACCAAACCAACTACACCT | + |
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Preference number: 4 (lower is better) Translates to: IDLKVSEISHTAQLRAFQRLLRP*TKPTTP Trigger: AGGTGTAGTTGGTTTGGTTCATGGTCTCAATAATCT...TTGGAATGCTCTCAGCTGAGCTGTGTGGCTAATTTCACTTACCTTCAGGTCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS-3UTR CCA 90 bp | GGATTATTGCTTGAGTCCAGTAGGTTGAAGTTACAGAGCTATGACTATGGCACTATGTTTGCCTGTCACTaGTACAATATTCCTCTTGCC | + |
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Preference number: 4 (lower is better) Translates to: GLLLESSRLKLQSYDYGTMFACH*YNIPLA Trigger: GGCAAGAGGAATATTGTACCAGTGACAGGCAAACAT...AGTGCCATAGTCATAGCTCTGTAACTTCAACCTACTGGACTCAAGCAATAATCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS-3UTR TCA 90 bp | ATGGCCTCATGTTTGCCTGTCACTGGTACAATATTCCTCTTGCCTAAAATATATCTGTTTCTCCACCAGTaGCTAAGACAACATTTGCCT | + |
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Preference number: 4 (lower is better) Translates to: MASCLPVTGTIFLLPKIYLFLHQ*LRQHLP Trigger: AGGCAAATGTTGTCTTAGTCACTGGTGGAGAAACAG...ATATATTTTAGGCAAGAGGAATATTGTACCAGTGACAGGCAAACATGAGGCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS-3UTR CCA 90 bp | TTCCATCAAATGAGATGTAGAATTCACAAAGGTTTGGGGGTCACCATGTTGACCATATGCAATGATGAATaGCCTCATGTTTGCCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: FHQMRCRIHKGLGVTMLTICNDE*PHVCLS Trigger: TGACAGGCAAACATGAGGCCATTCATCATTGCATAT...GGTCAACATGGTGACCCCCAAACCTTTGTGAATTCTACATCTCATTTGATGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS-3UTR TCA 90 bp | CTATATGCAATGATGAATGGCCTCATGTTTGCCTGTCACTGGTACAATATTCCTACCTGTTGCAGGATTTaGAACAGTGCTATAATCCAT | + |
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Preference number: 4 (lower is better) Translates to: LYAMMNGLMFACHWYNIPTCCRI*NSAIIH Trigger: ATGGATTATAGCACTGTTTCAAATCCTGCAACAGGT...AGGAATATTGTACCAGTGACAGGCAAACATGAGGCCATTCATCATTGCATATAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS-3UTR GCA 90 bp | ATAGACCTGAAGGTAAGTGAAATTAGCCACACAGCTCAGCTGAGAGCATTCCAAAAACGACAACTTAAATaGTTAATGACAGAGTGCTTG | + |
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Preference number: 4 (lower is better) Translates to: IDLKVSEISHTAQLRAFQKRQLK*LMTECL Trigger: CAAGCACTCTGTCATTAAGCATTTAAGTTGTCGTTT...TTGGAATGCTCTCAGCTGAGCTGTGTGGCTAATTTCACTTACCTTCAGGTCTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS-3UTR TCA 90 bp | ATGGCCTCATGTTTGCCTGTCACTGGTACAATATTCCTCTTGCCTAAAATATATCCTTCTAATTCTAACTaGTGCTGTATCACTCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: MASCLPVTGTIFLLPKIYPSNSN*CCITLF Trigger: GAACAGAGTGATACAGCATCAGTTAGAATTAGAAGG...ATATATTTTAGGCAAGAGGAATATTGTACCAGTGACAGGCAAACATGAGGCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS-3UTR TCA 90 bp | GTAAGATCCAAGATAACATATATGCCAACTGATCGTGACCTCTGTCCTTATATTAACCTTTCGAGGATGTaGTCTTACTTCACGTTGATC | + |
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Preference number: 4 (lower is better) Translates to: VRSKITYMPTDRDLCPYINLSRM*SYFTLI Trigger: GATCAACGTGAAGTAAGATCACATCCTCGAAAGGTT...AATATAAGGACAGAGGTCACGATCAGTTGGCATATATGTTATCTTGGATCTTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| 3UTR CAA 72 bp | CAACAAGACTCCTTAATGTATGTTCAATTAGTGTACTaGAATCCAGATCTAAGACGTATAGGGCATGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: QQDSLMYVQLVY*NPDLRRIGHGD Trigger: GTCACCATGCCCTATACGTCTTAGATCTGGATTCAAGTACACTAATTGAACATACATTAAGGAGTCTTGTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS-3UTR TCA 90 bp | ATGGCCTCATGTTTGCCTGTCACTGGTACAATATTCCTCTTGCCTAAAATATATATGGAAGTAAATGGCTaGGGTAAAGGACAAGATTAT | + |
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Preference number: 4 (lower is better) Translates to: MASCLPVTGTIFLLPKIYMEVNG*GKGQDY Trigger: ATAATCTTGTCCTTTACCTCAGCCATTTACTTCCAT...ATATATTTTAGGCAAGAGGAATATTGTACCAGTGACAGGCAAACATGAGGCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS-3UTR TCA 90 bp | ATGGCCTCATGTTTGCCTGTCACTGGTACAATATTCCTCTTGCCTAAAATATATGCAGTTTCCATCAAATaGGATGTAGAATTCACAAAG | + |
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Preference number: 4 (lower is better) Translates to: MASCLPVTGTIFLLPKIYAVSIK*DVEFTK Trigger: CTTTGTGAATTCTACATCTCATTTGATGGAAACTGC...ATATATTTTAGGCAAGAGGAATATTGTACCAGTGACAGGCAAACATGAGGCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS-3UTR TCA 90 bp | ATTCATGCCTCAGCAAATTTAGACACTTTCAGGGTATTCCTAAAGTTCTATATGAGAAGTCAGAAAAATTaGGTTAAAAACGGCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: IHASANLDTFRVFLKFYMRSQKN*VKNGCR Trigger: CCTGCAGCCGTTTTTAACTCAATTTTTCTGACTTCT...CATATAGAACTTTAGGAATACCCTGAAAGTGTCTAAATTTGCTGAGGCATGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS-3UTR TCA 90 bp | ATTCATGCCTCAGCAAATTTAGACACTTTCAGGGTATTCCTAAAGTTCTATATGGACCATACCTTACAATaGAGGTACTTAGTACGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: IHASANLDTFRVFLKFYMDHTLQ*RYLVRF Trigger: AAAACGTACTAAGTACCTTCATTGTAAGGTATGGTC...CATATAGAACTTTAGGAATACCCTGAAAGTGTCTAAATTTGCTGAGGCATGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS CCA 90 bp | GGATTCGCATCTGGCGCCGCCAGGCTCATATGGCGCTTGCCGAGCTaGGGGACAAACAGGACAAGGTTCCGAGAGTGGGAGCCGCGCCGC | + |
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Preference number: 5 (lower is better) Translates to: GFASGAARLIWRLPS*GTNRTRFREWEPRR Trigger: GCGGCGCGGCTCCCACTCTCGGAACCTTGTCCTGTTTGTCCCCCAGCTCGGCAAGCGCCATATGAGCCTGGCGGCGCCAGATGCGAATCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449470.6 ENST00000514842.6 |
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| CDS CCA 90 bp | GAGAATTACGAGGCCCAGCAGTCGAACTCCCACTCAGCCCAACCCTaGAAGTCCTATGCGGGCGGTGCCATCCCGGCAAGACTGAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: ENYEAQQSNSHSAQP*KSYAGGAIPARLRG Trigger: GCCCCTCAGTCTTGCCGGGATGGCACCGCCCGCATAGGACTTCCAGGGTTGGGCTGAGTGGGAGTTCGACTGCTGGGCCTCGTAATTCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449470.6 ENST00000514842.6 |
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| CDS GCA 90 bp | CCACAACAGGATTCGCATCTGGCGCCGCCAGGCTCATATGGCGCTTaGCGAGCTGGGGGACAAACAGGACAAGGTTCCGAGAGTGGGAGC | + |
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Preference number: 5 (lower is better) Translates to: PQQDSHLAPPGSYGA*RAGGQTGQGSESGS Trigger: GCTCCCACTCTCGGAACCTTGTCCTGTTTGTCCCCCAGCTCGGCAAGCGCCATATGAGCCTGGCGGCGCCAGATGCGAATCCTGTTGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000449470.6 ENST00000514842.6 |
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| CDS TCA 90 bp | CCCAACCCTGGAAGTCCTATGCGGGCGGTGCCATCCCGGCAAGACTaGGGGGCGGGAATAGGCCAAAAAGCCCACAACAGGATTCGCATC | + |
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Preference number: 5 (lower is better) Translates to: PNPGSPMRAVPSRQD*GAGIGQKAHNRIRI Trigger: GATGCGAATCCTGTTGTGGGCTTTTTGGCCTATTCCCGCCCCTCAGTCTTGCCGGGATGGCACCGCCCGCATAGGACTTCCAGGGTTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000449470.6 ENST00000514842.6 |
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| CDS CCA 90 bp | TGGCGCTTGCCGAGCTGGGGGACAAACAGGACAAGGTTCCGAGAGTaGGAGCCGCGCCGCAGCCTTTCCCAGAGCAGATGGTTTCAGATT | + |
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Preference number: 5 (lower is better) Translates to: WRLPSWGTNRTRFRE*EPRRSLSQSRWFQI Trigger: AATCTGAAACCATCTGCTCTGGGAAAGGCTGCGGCGCGGCTCCCACTCTCGGAACCTTGTCCTGTTTGTCCCCCAGCTCGGCAAGCGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000449470.6 ENST00000514842.6 |
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| CDS GCA 90 bp | TTTCCACCAAACTACGCCGCACAGAGCTCCACTCCTACTGGAGACTaGCAGGCGGAAGTTCCAGACAAGATGTCGGAGGACGGGAGACCG | + |
|
Preference number: 5 (lower is better) Translates to: FPPNYAAQSSTPTGD*QAEVPDKMSEDGRP Trigger: CGGTCTCCCGTCCTCCGACATCTTGTCTGGAACTTCCGCCTGGCAGTCTCCAGTAGGAGTGGAGCTCTGTGCGGCGTAGTTTGGTGGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000449470.6 ENST00000514842.6 ENST00000645496.2 |
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| CDS CCA 90 bp | AAAAAGCCCACAACAGGATTCGCATCTGGCGCCGCCAGGCTCATATaGCGCTTGCCGAGCTGGGGGACAAACAGGACAAGGTTCCGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: KKPTTGFASGAARLI*RLPSWGTNRTRFRE Trigger: CTCTCGGAACCTTGTCCTGTTTGTCCCCCAGCTCGGCAAGCGCCATATGAGCCTGGCGGCGCCAGATGCGAATCCTGTTGTGGGCTTTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000449470.6 ENST00000514842.6 |
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| CDS CCA 90 bp | GCCCGTTTTTCCACCAAACTACGCCGCACAGAGCTCCACTCCTACTaGAGACTGCCAGGCGGAAGTTCCAGACAAGATGTCGGAGGACGG | + |
|
Preference number: 5 (lower is better) Translates to: ARFSTKLRRTELHSY*RLPGGSSRQDVGGR Trigger: CCGTCCTCCGACATCTTGTCTGGAACTTCCGCCTGGCAGTCTCCAGTAGGAGTGGAGCTCTGTGCGGCGTAGTTTGGTGGAAAAACGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000449470.6 ENST00000514842.6 ENST00000645496.2 |
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| CDS CCA 90 bp | TTAGACATTAGACTAACATTTACTGAGTTACTAAGGTACAGCACATaGCAGGAATTGAGACCACCAAGCCAAAGGCAGGCCCCCTGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LDIRLTFTELLRYST*QELRPPSQRQAPCL Trigger: AAGGCAGGGGGCCTGCCTTTGGCTTGGTGGTCTCAATTCCTGCCATGTGCTGTACCTTAGTAACTCAGTAAATGTTAGTCTAATGTCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644328.1 |
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| CDS-3UTR CAA 90 bp | TTCCATCAAATGAGATGTAGAATTCACAAAGGTTTGGGGGTCACCATGTTGACCAGAATTCACAAAGGTTaGGGGGTCACCATGTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: FHQMRCRIHKGLGVTMLTRIHKG*GVTMLT Trigger: GGTCAACATGGTGACCCCCAAACCTTTGTGAATTCT...GGTCAACATGGTGACCCCCAAACCTTTGTGAATTCTACATCTCATTTGATGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS TCA 90 bp | ACCCATTCTCTGAAAGAGACACTTACGCTGTATAAAGCACAGGTTTaGGAAACCTCCCTTTCCAAAACAAGGAAGTCTGATACATCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: THSLKETLTLYKAQV*ETSLSKTRKSDTSA Trigger: AGCAGATGTATCAGACTTCCTTGTTTTGGAAAGGGAGGTTTCTCAAACCTGTGCTTTATACAGCGTAAGTGTCTCTTTCAGAGAATGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000514842.6 ENST00000645585.1 |
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| CDS CCA 90 bp | AAGATGTTTGCAATTTTAAGCTGCAGAGAGATGACATGCCCAAGGTaGACAGTGAGAGCTGAAATTTACGCTAGGCTATTAACCACTACT | + |
|
Preference number: 5 (lower is better) Translates to: KMFAILSCREMTCPR*TVRAEIYARLLTTT Trigger: AGTAGTGGTTAATAGCCTAGCGTAAATTTCAGCTCTCACTGTCCACCTTGGGCATGTCATCTCTCTGCAGCTTAAAATTGCAAACATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511075.5 |
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| CDS GCA 90 bp | CCATCTGGTCTTTGCTCTCAGCTCTATCGCTTAAAGACCCACAGATaGCTATTTTTGCCAAGTTCTTGCGTATTACACCAAATAAAATAC | + |
|
Preference number: 5 (lower is better) Translates to: PSGLCSQLYRLKTHR*LFLPSSCVLHQIKY Trigger: GTATTTTATTTGGTGTAATACGCAAGAACTTGGCAAAAATAGGCATCTGTGGGTCTTTAAGCGATAGAGCTGAGAGCAAAGACCAGATGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000514842.6 ENST00000645585.1 |
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| CDS-3UTR CAA 90 bp | ATAGACCTGAAGGTAAGTGAAATTAGCCACACAGCTCAGCTGAGAGCATTCCAAGTTCAATTAGTGTACTaGAATCCAGATCTAAGACGT | + |
|
Preference number: 5 (lower is better) Translates to: IDLKVSEISHTAQLRAFQVQLVY*NPDLRR Trigger: ACGTCTTAGATCTGGATTCAAGTACACTAATTGAAC...TTGGAATGCTCTCAGCTGAGCTGTGTGGCTAATTTCACTTACCTTCAGGTCTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS-3UTR CAA 90 bp | GGATTATTGCTTGAGTCCAGTAGGTTGAAGTTACAGAGCTATGACTATGGCACTAACCTGTTGCAGGATTaGAAACAGTGCTATAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: GLLLESSRLKLQSYDYGTNLLQD*KQCYNP Trigger: TGGATTATAGCACTGTTTCAAATCCTGCAACAGGTT...AGTGCCATAGTCATAGCTCTGTAACTTCAACCTACTGGACTCAAGCAATAATCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS GCA 90 bp | CCTTATAAACATTGTTCTGTCTATTCAGTGGACTGTAAAGCTCCTTaGGGAGGCTTTATTTCACTAGCTCTTATGCCCTCAATGAACAAT | + |
|
Preference number: 5 (lower is better) Translates to: PYKHCSVYSVDCKAP*GGFISLALMPSMNN Trigger: ATTGTTCATTGAGGGCATAAGAGCTAGTGAAATAAAGCCTCCGCAAGGAGCTTTACAGTCCACTGAATAGACAGAACAATGTTTATAAGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644328.1 |
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| CDS CCA 90 bp | CTCCCAACAGTTAAGCTTTGTAGAAGTTGCAACAAACTTCCCTTCTaGAAAATTAAATCATCAGGTTTAAATGACCTACTGCCGGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LPTVKLCRSCNKLPF*KIKSSGLNDLLPVP Trigger: AGGAACCGGCAGTAGGTCATTTAAACCTGATGATTTAATTTTCCAGAAGGGAAGTTTGTTGCAACTTCTACAAAGCTTAACTGTTGGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000642337.1 |
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| CDS-3UTR CAA 90 bp | TTCCATCAAATGAGATGTAGAATTCACAAAGGTTTGGGGGTCACCATGTTGACCGAACTTCGCAGGTCTTaGTTTCATTTTCTACATTGT | + |
|
Preference number: 5 (lower is better) Translates to: FHQMRCRIHKGLGVTMLTELRRS*FHFLHC Trigger: ACAATGTAGAAAATGAAACAAAGACCTGCGAAGTTC...GGTCAACATGGTGACCCCCAAACCTTTGTGAATTCTACATCTCATTTGATGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS GCA 90 bp | CTCTATCGCTTAAAGACCCACAGATGCCTATTTTTGCCAAGTTCTTaGGTATTACACCAAATAAAATACATGACCCATTCTCTGAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LYRLKTHRCLFLPSS*VLHQIKYMTHSLKE Trigger: CTCTTTCAGAGAATGGGTCATGTATTTTATTTGGTGTAATACGCAAGAACTTGGCAAAAATAGGCATCTGTGGGTCTTTAAGCGATAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000514842.6 ENST00000645585.1 |
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| CDS-3UTR CAA 90 bp | ATTCATGCCTCAGCAAATTTAGACACTTTCAGGGTATTCCTAAAGTTCTATATGGAGGAAGATGACCAGTaGACTGTCACAATAATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: IHASANLDTFRVFLKFYMEEDDQ*TVTIIQ Trigger: CTGGATTATTGTGACAGTCAACTGGTCATCTTCCTC...CATATAGAACTTTAGGAATACCCTGAAAGTGTCTAAATTTGCTGAGGCATGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000645496.2 |
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| CDS TCA 90 bp | CTTTATATAATTGGCTGTGTTCAGAATCTGGTTTTTCAATTTCACTaGACAGGCTGGTATTCTGGACAGCAACATTTAAAGCTGAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LYIIGCVQNLVFQFH*TGWYSGQQHLKLKH Trigger: GTGCTTCAGCTTTAAATGTTGCTGTCCAGAATACCAGCCTGTTCAGTGAAATTGAAAAACCAGATTCTGAACACAGCCAATTATATAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000642337.1 ENST00000645894.1 |
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| CDS GCA 72 bp | GTCGAACTCCCACTCAGCCCAACCCTGGAAGTCCTATaGGGGCGGTGCCATCCCGGCAAGACTGAGGGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: VELPLSPTLEVL*GRCHPGKTEGR Trigger: CCGCCCCTCAGTCTTGCCGGGATGGCACCGCCCGCATAGGACTTCCAGGGTTGGGCTGAGTGGGAGTTCGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000449470.6 ENST00000514842.6 |
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| CDS CCA 72 bp | CCGAGCTGGGGGACAAACAGGACAAGGTTCCGAGAGTaGGAGCCGCGCCGCAGCCTTTCCCAGAGCAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: PSWGTNRTRFRE*EPRRSLSQSRW Trigger: CCATCTGCTCTGGGAAAGGCTGCGGCGCGGCTCCCACTCTCGGAACCTTGTCCTGTTTGTCCCCCAGCTCGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000449470.6 ENST00000514842.6 |
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| CDS CCA 72 bp | GAGGCCCAGCAGTCGAACTCCCACTCAGCCCAACCCTaGAAGTCCTATGCGGGCGGTGCCATCCCGGCAAGA | + |
|
Preference number: 6 (lower is better) Translates to: EAQQSNSHSAQP*KSYAGGAIPAR Trigger: TCTTGCCGGGATGGCACCGCCCGCATAGGACTTCCAGGGTTGGGCTGAGTGGGAGTTCGACTGCTGGGCCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000449470.6 ENST00000514842.6 |
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| CDS CCA 72 bp | TCTGGCGCCGCCAGGCTCATATGGCGCTTGCCGAGCTaGGGGACAAACAGGACAAGGTTCCGAGAGTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: SGAARLIWRLPS*GTNRTRFREWE Trigger: CTCCCACTCTCGGAACCTTGTCCTGTTTGTCCCCCAGCTCGGCAAGCGCCATATGAGCCTGGCGGCGCCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000449470.6 ENST00000514842.6 |
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| CDS CAA 90 bp | CCCACAACAGGATTCGCATCTGGCGCCGCCAGGCTCATATGGCGCTaGCCGAGCTGGGGGACAAACAGGACAAGGTTCCGAGAGTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: PTTGFASGAARLIWR*PSWGTNRTRFREWE Trigger: CTCCCACTCTCGGAACCTTGTCCTGTTTGTCCCCCAGCTCGGCAAGCGCCATATGAGCCTGGCGGCGCCAGATGCGAATCCTGTTGTGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000449470.6 ENST00000514842.6 |
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| CDS TCA 72 bp | GGAAGTCCTATGCGGGCGGTGCCATCCCGGCAAGACTaGGGGGCGGGAATAGGCCAAAAAGCCCACAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: GSPMRAVPSRQD*GAGIGQKAHNR Trigger: CCTGTTGTGGGCTTTTTGGCCTATTCCCGCCCCTCAGTCTTGCCGGGATGGCACCGCCCGCATAGGACTTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000449470.6 ENST00000514842.6 |
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| CDS GCA 72 bp | GATTCGCATCTGGCGCCGCCAGGCTCATATGGCGCTTaGCGAGCTGGGGGACAAACAGGACAAGGTTCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: DSHLAPPGSYGA*RAGGQTGQGSE Trigger: CTCGGAACCTTGTCCTGTTTGTCCCCCAGCTCGGCAAGCGCCATATGAGCCTGGCGGCGCCAGATGCGAATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000449470.6 ENST00000514842.6 |
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| CDS CAA 72 bp | GGATTCGCATCTGGCGCCGCCAGGCTCATATGGCGCTaGCCGAGCTGGGGGACAAACAGGACAAGGTTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: GFASGAARLIWR*PSWGTNRTRFR Trigger: TCGGAACCTTGTCCTGTTTGTCCCCCAGCTCGGCAAGCGCCATATGAGCCTGGCGGCGCCAGATGCGAATCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000449470.6 ENST00000514842.6 |
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| CDS CCA 72 bp | ACAACAGGATTCGCATCTGGCGCCGCCAGGCTCATATaGCGCTTGCCGAGCTGGGGGACAAACAGGACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: TTGFASGAARLI*RLPSWGTNRTR Trigger: CCTTGTCCTGTTTGTCCCCCAGCTCGGCAAGCGCCATATGAGCCTGGCGGCGCCAGATGCGAATCCTGTTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000449470.6 ENST00000514842.6 |
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| CDS CCA 72 bp | GGAATAGGCCAAAAAGCCCACAACAGGATTCGCATCTaGCGCCGCCAGGCTCATATGGCGCTTGCCGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: GIGQKAHNRIRI*RRQAHMALAEL Trigger: CAGCTCGGCAAGCGCCATATGAGCCTGGCGGCGCCAGATGCGAATCCTGTTGTGGGCTTTTTGGCCTATTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000449470.6 ENST00000514842.6 |
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| CDS GCA 72 bp | AACTACGCCGCACAGAGCTCCACTCCTACTGGAGACTaGCAGGCGGAAGTTCCAGACAAGATGTCGGAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: NYAAQSSTPTGD*QAEVPDKMSED Trigger: GTCCTCCGACATCTTGTCTGGAACTTCCGCCTGGCAGTCTCCAGTAGGAGTGGAGCTCTGTGCGGCGTAGTT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000449470.6 ENST00000514842.6 ENST00000645496.2 |
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| CDS CCA 72 bp | TCCACCAAACTACGCCGCACAGAGCTCCACTCCTACTaGAGACTGCCAGGCGGAAGTTCCAGACAAGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: STKLRRTELHSY*RLPGGSSRQDV Trigger: GACATCTTGTCTGGAACTTCCGCCTGGCAGTCTCCAGTAGGAGTGGAGCTCTGTGCGGCGTAGTTTGGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000449470.6 ENST00000514842.6 ENST00000645496.2 |
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| CDS CAA 72 bp | TTTACTGAGTTACTAAGGTACAGCACATGGCAGGAATaGAGACCACCAAGCCAAAGGCAGGCCCCCTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: FTELLRYSTWQE*RPPSQRQAPCL Trigger: AAGGCAGGGGGCCTGCCTTTGGCTTGGTGGTCTCAATTCCTGCCATGTGCTGTACCTTAGTAACTCAGTAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644328.1 |
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| CDS CAA 90 bp | AGACTAACATTTACTGAGTTACTAAGGTACAGCACATGGCAGGAATaGAGACCACCAAGCCAAAGGCAGGCCCCCTGCCTTCAAGGAACT | + |
|
Preference number: 6 (lower is better) Translates to: RLTFTELLRYSTWQE*RPPSQRQAPCLQGT Trigger: AGTTCCTTGAAGGCAGGGGGCCTGCCTTTGGCTTGGTGGTCTCAATTCCTGCCATGTGCTGTACCTTAGTAACTCAGTAAATGTTAGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000644328.1 |
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| CDS CCA 72 bp | AGACTAACATTTACTGAGTTACTAAGGTACAGCACATaGCAGGAATTGAGACCACCAAGCCAAAGGCAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RLTFTELLRYST*QELRPPSQRQA Trigger: GGCCTGCCTTTGGCTTGGTGGTCTCAATTCCTGCCATGTGCTGTACCTTAGTAACTCAGTAAATGTTAGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644328.1 |
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| CDS GCA 72 bp | CATTGTTCTGTCTATTCAGTGGACTGTAAAGCTCCTTaGGGAGGCTTTATTTCACTAGCTCTTATGCCCTCA | + |
|
Preference number: 6 (lower is better) Translates to: HCSVYSVDCKAP*GGFISLALMPS Trigger: TGAGGGCATAAGAGCTAGTGAAATAAAGCCTCCGCAAGGAGCTTTACAGTCCACTGAATAGACAGAACAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644328.1 |
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| CDS TCA 72 bp | CTGAAAGAGACACTTACGCTGTATAAAGCACAGGTTTaGGAAACCTCCCTTTCCAAAACAAGGAAGTCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: LKETLTLYKAQV*ETSLSKTRKSD Trigger: ATCAGACTTCCTTGTTTTGGAAAGGGAGGTTTCTCAAACCTGTGCTTTATACAGCGTAAGTGTCTCTTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000514842.6 ENST00000645585.1 |
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| CDS CCA 72 bp | GAACCAAGCCTTATAAACATTGTTCTGTCTATTCAGTaGACTGTAAAGCTCCTTGCGGAGGCTTTATTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: EPSLINIVLSIQ*TVKLLAEALFH Trigger: GTGAAATAAAGCCTCCGCAAGGAGCTTTACAGTCCACTGAATAGACAGAACAATGTTTATAAGGCTTGGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000644328.1 |
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| CDS CAA 90 bp | CTTTGCTCTCAGCTCTATCGCTTAAAGACCCACAGATGCCTATTTTaGCCAAGTTCTTGCGTATTACACCAAATAAAATACATGACCCAT | + |
|
Preference number: 6 (lower is better) Translates to: LCSQLYRLKTHRCLF*PSSCVLHQIKYMTH Trigger: ATGGGTCATGTATTTTATTTGGTGTAATACGCAAGAACTTGGCAAAAATAGGCATCTGTGGGTCTTTAAGCGATAGAGCTGAGAGCAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000514842.6 ENST00000645585.1 |
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| CDS CCA 72 bp | TCTGGTTTTTCAATTTCACTGAACAGGCTGGTATTCTaGACAGCAACATTTAAAGCTGAAGCACTGAACCTT | + |
|
Preference number: 6 (lower is better) Translates to: SGFSISLNRLVF*TATFKAEALNL Trigger: AAGGTTCAGTGCTTCAGCTTTAAATGTTGCTGTCCAGAATACCAGCCTGTTCAGTGAAATTGAAAAACCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000642337.1 ENST00000645894.1 |
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| CDS CAA 90 bp | GCTCTATCGCTTAAAGACCCACAGATGCCTATTTTTGCCAAGTTCTaGCGTATTACACCAAATAAAATACATGACCCATTCTCTGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: ALSLKDPQMPIFAKF*RITPNKIHDPFSER Trigger: TCTTTCAGAGAATGGGTCATGTATTTTATTTGGTGTAATACGCAAGAACTTGGCAAAAATAGGCATCTGTGGGTCTTTAAGCGATAGAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000514842.6 ENST00000645585.1 |
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| CDS CAA 72 bp | CAGCTCTATCGCTTAAAGACCCACAGATGCCTATTTTaGCCAAGTTCTTGCGTATTACACCAAATAAAATAC | + |
|
Preference number: 6 (lower is better) Translates to: QLYRLKTHRCLF*PSSCVLHQIKY Trigger: GTATTTTATTTGGTGTAATACGCAAGAACTTGGCAAAAATAGGCATCTGTGGGTCTTTAAGCGATAGAGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000514842.6 ENST00000645585.1 |
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| CDS TCA 72 bp | AACACTCACTGCCAAGATTTTCTAATAACTGTCACCTaGACCAAGCCTTATAAACATTGTTCTGTCTATTCA | + |
|
Preference number: 6 (lower is better) Translates to: NTHCQDFLITVT*TKPYKHCSVYS Trigger: TGAATAGACAGAACAATGTTTATAAGGCTTGGTTCAGGTGACAGTTATTAGAAAATCTTGGCAGTGAGTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000644328.1 |
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| CDS GCA 72 bp | TTAAAGACCCACAGATGCCTATTTTTGCCAAGTTCTTaGGTATTACACCAAATAAAATACATGACCCATTCT | + |
|
Preference number: 6 (lower is better) Translates to: LKTHRCLFLPSS*VLHQIKYMTHS Trigger: AGAATGGGTCATGTATTTTATTTGGTGTAATACGCAAGAACTTGGCAAAAATAGGCATCTGTGGGTCTTTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000514842.6 ENST00000645585.1 |
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