Pregenerated sensors for RPL8 (Homo sapiens)
Ensembl gene IDs: ENSG00000161016Ensembl transcript IDs: ENST00000262584.7, ENST00000394920.6, ENST00000525232.5, ENST00000528957.6, ENST00000529920.5, ENST00000531767.1, ENST00000532702.1, ENST00000534781.1
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CCAGCCACCACACCTCCATCACCTAGAATGCTGGCTGAGCTCCAAGCGCAGGGACCCCCTCACCATGTGTaGGACGTCAGGCCGGCCACT | + |
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Preference number: 4 (lower is better) Translates to: PATTPPSPRMLAELQAQGPPHHV*DVRPAT Trigger: AGTGGCCGGCCTGACGTCTCACACATGGTGAGGGGG...TCCCTGCGCTTGGAGCTCAGCCAGCATTCTAGGTGATGGAGGTGTGGTGGCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000529920.5 |
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| CDS-3UTR GCA 90 bp | CCAGCCACCACACCTCCATCACCTAGAATGCTGGCTGAGCTCCAAGCGCAGGGAGCAGCGCCTTTACGGTaGTTCACGTGCGCGCGGAAC | + |
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Preference number: 4 (lower is better) Translates to: PATTPPSPRMLAELQAQGAAPLR*FTCARN Trigger: GTTCCGCGCGCACGTGAAGCACCGTAAAGGCGCTGC...TCCCTGCGCTTGGAGCTCAGCCAGCATTCTAGGTGATGGAGGTGTGGTGGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000529920.5 |
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| CDS-3UTR CCA 90 bp | CCTCCAGCCACCACACCTCCATCACCTAGAATGCTGGCTGAGCTCCAAGCGCAGCCGCGGCCCGGGTCGTaGATGATGTCCTTGACGATG | + |
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Preference number: 4 (lower is better) Translates to: PPATTPPSPRMLAELQAQPRPGS*MMSLTM Trigger: CATCGTCAAGGACATCATCCACGACCCGGGCCGCGG...CTGCGCTTGGAGCTCAGCCAGCATTCTAGGTGATGGAGGTGTGGTGGCTGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000529920.5 |
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| CDS-3UTR GCA 90 bp | CCAGCCACCACACCTCCATCACCTAGAATGCTGGCTGAGCTCCAAGCGCAGGGATTACGGTGCTTCACGTaGGCGCGGAACACAGACCCG | + |
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Preference number: 4 (lower is better) Translates to: PATTPPSPRMLAELQAQGLRCFT*ARNTDP Trigger: CGGGTCTGTGTTCCGCGCGCACGTGAAGCACCGTAA...TCCCTGCGCTTGGAGCTCAGCCAGCATTCTAGGTGATGGAGGTGTGGTGGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000529920.5 |
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| CDS-3UTR CCA 90 bp | CCTCCAGCCACCACACCTCCATCACCTAGAATGCTGGCTGAGCTCCAAGCGCAGCATCACCTAGAATGCTaGCTGAGCTCCAAGCGCAGG | + |
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Preference number: 4 (lower is better) Translates to: PPATTPPSPRMLAELQAQHHLEC*LSSKRR Trigger: CCTGCGCTTGGAGCTCAGCCAGCATTCTAGGTGATG...CTGCGCTTGGAGCTCAGCCAGCATTCTAGGTGATGGAGGTGTGGTGGCTGGAGG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000529920.5 |
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| CDS-3UTR GCA 90 bp | CCAGCCACCACACCTCCATCACCTAGAATGCTGGCTGAGCTCCAAGCGCAGGGACCACCTCCAAAAGGATaGTCCACAGGATTCATGGCC | + |
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Preference number: 4 (lower is better) Translates to: PATTPPSPRMLAELQAQGPPPKG*STGFMA Trigger: GGCCATGAATCCTGTGGAGCATCCTTTTGGAGGTGG...TCCCTGCGCTTGGAGCTCAGCCAGCATTCTAGGTGATGGAGGTGTGGTGGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000529920.5 |
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| CDS GCA 90 bp | AGGGCCGCGACACCTTCCGGGCGCGCCACGGCCAGCCTAGCGCGGTaGACGCCGGGGCTTGTAGTCACCAGCGGCCGCCGGCCCCGCCTA | + |
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Preference number: 5 (lower is better) Translates to: RAATPSGRATASLAR*TPGLVVTSGRRPRL Trigger: TAGGCGGGGCCGGCGGCCGCTGGTGACTACAAGCCCCGGCGTGCACCGCGCTAGGCTGGCCGTGGCGCGCCCGGAAGGTGTCGCGGCCCT 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262584.7 |
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| CDS CCA 90 bp | CTCAGGAGGGCCGGTCCGGGTCTCAGCGCGCCTCACGGAAGAGGATaGCGGCGGATACTGCCCATGCCGCAAGGCCGCAAGGATGACCTA | + |
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Preference number: 5 (lower is better) Translates to: LRRAGPGLSAPHGRG*RRILPMPQGRKDDL Trigger: TAGGTCATCCTTGCGGCCTTGCGGCATGGGCAGTATCCGCCGCCATCCTCTTCCGTGAGGCGCGCTGAGACCCGGACCGGCCCTCCTGAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000394920.6 ENST00000528957.6 ENST00000532702.1 |
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| CDS GCA 90 bp | GTCTCAGCGCGCCTCACGGAAGAGGATGGCGGCGGATACTGCCCATaGCGCAAGGCCGCAAGGATGACCTACCTGTTCACCAGCGCGGCC | + |
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Preference number: 5 (lower is better) Translates to: VSARLTEEDGGGYCP*RKAARMTYLFTSAA Trigger: GGCCGCGCTGGTGAACAGGTAGGTCATCCTTGCGGCCTTGCGGCATGGGCAGTATCCGCCGCCATCCTCTTCCGTGAGGCGCGCTGAGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000394920.6 ENST00000528957.6 ENST00000532702.1 |
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| CDS CCA 90 bp | GCCTCCCGGTACAACTCTCTCGGCACCCACCGGTGGCCACTGGTCTaGCCACGCGGATGTCCCCACCTGAAGCTTCTGCCTGCGAGGTTC | + |
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Preference number: 5 (lower is better) Translates to: ASRYNSLGTHRWPLV*PRGCPHLKLLPARF Trigger: GAACCTCGCAGGCAGAAGCTTCAGGTGGGGACATCCGCGTGGCCAGACCAGTGGCCACCGGTGGGTGCCGAGAGAGTTGTACCGGGAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000525232.5 ENST00000531767.1 |
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| CDS GCA 90 bp | GTCCGGGTCTCAGCGCGCCTCACGGAAGAGGATGGCGGCGGATACTaGCCATGCCGCAAGGCCGCAAGGATGACCTACCTGTTCACCAGC | + |
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Preference number: 5 (lower is better) Translates to: VRVSARLTEEDGGGY*PCRKAARMTYLFTS Trigger: GCTGGTGAACAGGTAGGTCATCCTTGCGGCCTTGCGGCATGGGCAGTATCCGCCGCCATCCTCTTCCGTGAGGCGCGCTGAGACCCGGAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000394920.6 ENST00000528957.6 ENST00000532702.1 |
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| CDS GCA 90 bp | CTGCAAGGGGAAGCAGCATCAGGCCGTCAGCACAGTAAGAAACAATaGGAACCCCCTCGCTCTAGGCAACCCGCGAAGTTGCGAGCACAG | + |
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Preference number: 5 (lower is better) Translates to: LQGEAASGRQHSKKQ*EPPRSRQPAKLRAQ Trigger: CTGTGCTCGCAACTTCGCGGGTTGCCTAGAGCGAGGGGGTTCGCATTGTTTCTTACTGTGCTGACGGCCTGATGCTGCTTCCCCTTGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525232.5 |
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| CDS GCA 90 bp | GTAAGAAACAATGCGAACCCCCTCGCTCTAGGCAACCCGCGAAGTTaGGAGCACAGCATTCAACATCCAGCCTCCCGGTACAACTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: VRNNANPLALGNPRS*EHSIQHPASRYNSL Trigger: GAGAGAGTTGTACCGGGAGGCTGGATGTTGAATGCTGTGCTCGCAACTTCGCGGGTTGCCTAGAGCGAGGGGGTTCGCATTGTTTCTTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000525232.5 ENST00000531767.1 |
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| CDS CCA 90 bp | CCCCTTGCACCCTGTGAGCTGACATCCAGTTTCTTCAATCCACAATaGGCAGGCAAGCCAAGGCCCTCACCTCCATCACCTAGAATGCTG | + |
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Preference number: 5 (lower is better) Translates to: PLAPCELTSSFFNPQ*AGKPRPSPPSPRML Trigger: CAGCATTCTAGGTGATGGAGGTGAGGGCCTTGGCTTGCCTGCCCATTGTGGATTGAAGAAACTGGATGTCAGCTCACAGGGTGCAAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000534781.1 |
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| CDS CCA 90 bp | TTTAGAACAACAGGTAATCGAATTCCAGGGACCAAGTCTAGCCACTaGCTGTCCACCGGCACTCACAGCATGTTCACCCACAGCCCTCAG | + |
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Preference number: 5 (lower is better) Translates to: FRTTGNRIPGTKSSH*LSTGTHSMFTHSPQ Trigger: CTGAGGGCTGTGGGTGAACATGCTGTGAGTGCCGGTGGACAGCCAGTGGCTAGACTTGGTCCCTGGAATTCGATTACCTGTTGTTCTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525232.5 |
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| CDS GCA 72 bp | ACACCTTCCGGGCGCGCCACGGCCAGCCTAGCGCGGTaGACGCCGGGGCTTGTAGTCACCAGCGGCCGCCGG | + |
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Preference number: 6 (lower is better) Translates to: TPSGRATASLAR*TPGLVVTSGRR Trigger: CCGGCGGCCGCTGGTGACTACAAGCCCCGGCGTGCACCGCGCTAGGCTGGCCGTGGCGCGCCCGGAAGGTGT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262584.7 |
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| CDS CCA 72 bp | GCCGGTCCGGGTCTCAGCGCGCCTCACGGAAGAGGATaGCGGCGGATACTGCCCATGCCGCAAGGCCGCAAG | + |
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Preference number: 6 (lower is better) Translates to: AGPGLSAPHGRG*RRILPMPQGRK Trigger: CTTGCGGCCTTGCGGCATGGGCAGTATCCGCCGCCATCCTCTTCCGTGAGGCGCGCTGAGACCCGGACCGGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000394920.6 ENST00000528957.6 ENST00000532702.1 |
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| CDS CCA 72 bp | CCAGCCTCCCGGTACAACTCTCTCGGCACCCACCGGTaGCCACTGGTCTGGCCACGCGGATGTCCCCACCTG | + |
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Preference number: 6 (lower is better) Translates to: PASRYNSLGTHR*PLVWPRGCPHL Trigger: CAGGTGGGGACATCCGCGTGGCCAGACCAGTGGCCACCGGTGGGTGCCGAGAGAGTTGTACCGGGAGGCTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000525232.5 ENST00000531767.1 |
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| CDS GCA 72 bp | TCAGCGCGCCTCACGGAAGAGGATGGCGGCGGATACTaGCCATGCCGCAAGGCCGCAAGGATGACCTACCTG | + |
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Preference number: 6 (lower is better) Translates to: SARLTEEDGGGY*PCRKAARMTYL Trigger: CAGGTAGGTCATCCTTGCGGCCTTGCGGCATGGGCAGTATCCGCCGCCATCCTCTTCCGTGAGGCGCGCTGA 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000394920.6 ENST00000528957.6 ENST00000532702.1 |
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| CDS GCA 72 bp | CGCCTCACGGAAGAGGATGGCGGCGGATACTGCCCATaGCGCAAGGCCGCAAGGATGACCTACCTGTTCACC | + |
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Preference number: 6 (lower is better) Translates to: RLTEEDGGGYCP*RKAARMTYLFT Trigger: GGTGAACAGGTAGGTCATCCTTGCGGCCTTGCGGCATGGGCAGTATCCGCCGCCATCCTCTTCCGTGAGGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000394920.6 ENST00000528957.6 ENST00000532702.1 |
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| CDS CCA 72 bp | TACAACTCTCTCGGCACCCACCGGTGGCCACTGGTCTaGCCACGCGGATGTCCCCACCTGAAGCTTCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: YNSLGTHRWPLV*PRGCPHLKLLP Trigger: AGGCAGAAGCTTCAGGTGGGGACATCCGCGTGGCCAGACCAGTGGCCACCGGTGGGTGCCGAGAGAGTTGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000525232.5 ENST00000531767.1 |
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| CDS TCA 72 bp | GGTGGCCACTGGTCTGGCCACGCGGATGTCCCCACCTaGAGCTTCTGCCTGCGAGGTTCCCATATCGGCTTA | + |
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Preference number: 6 (lower is better) Translates to: GGHWSGHADVPT*SFCLRGSHIGL Trigger: TAAGCCGATATGGGAACCTCGCAGGCAGAAGCTTCAGGTGGGGACATCCGCGTGGCCAGACCAGTGGCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000525232.5 ENST00000531767.1 |
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| CDS GCA 72 bp | AATGCGAACCCCCTCGCTCTAGGCAACCCGCGAAGTTaGGAGCACAGCATTCAACATCCAGCCTCCCGGTAC | + |
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Preference number: 6 (lower is better) Translates to: NANPLALGNPRS*EHSIQHPASRY Trigger: GTACCGGGAGGCTGGATGTTGAATGCTGTGCTCGCAACTTCGCGGGTTGCCTAGAGCGAGGGGGTTCGCATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000525232.5 ENST00000531767.1 |
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| CDS CAA 72 bp | CAATGCGAACCCCCTCGCTCTAGGCAACCCGCGAAGTaGCGAGCACAGCATTCAACATCCAGCCTCCCGGTA | + |
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Preference number: 6 (lower is better) Translates to: QCEPPRSRQPAK*RAQHSTSSLPV Trigger: TACCGGGAGGCTGGATGTTGAATGCTGTGCTCGCAACTTCGCGGGTTGCCTAGAGCGAGGGGGTTCGCATTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000525232.5 ENST00000531767.1 |
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| CDS GCA 72 bp | GAAGCAGCATCAGGCCGTCAGCACAGTAAGAAACAATaGGAACCCCCTCGCTCTAGGCAACCCGCGAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: EAASGRQHSKKQ*EPPRSRQPAKL Trigger: CAACTTCGCGGGTTGCCTAGAGCGAGGGGGTTCGCATTGTTTCTTACTGTGCTGACGGCCTGATGCTGCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000525232.5 |
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| CDS CCA 72 bp | CCCTGTGAGCTGACATCCAGTTTCTTCAATCCACAATaGGCAGGCAAGCCAAGGCCCTCACCTCCATCACCT | + |
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Preference number: 6 (lower is better) Translates to: PCELTSSFFNPQ*AGKPRPSPPSP Trigger: AGGTGATGGAGGTGAGGGCCTTGGCTTGCCTGCCCATTGTGGATTGAAGAAACTGGATGTCAGCTCACAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534781.1 |
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| CDS CAA 90 bp | AGTAAGAAACAATGCGAACCCCCTCGCTCTAGGCAACCCGCGAAGTaGCGAGCACAGCATTCAACATCCAGCCTCCCGGTACAACTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SKKQCEPPRSRQPAK*RAQHSTSSLPVQLS Trigger: AGAGAGTTGTACCGGGAGGCTGGATGTTGAATGCTGTGCTCGCAACTTCGCGGGTTGCCTAGAGCGAGGGGGTTCGCATTGTTTCTTACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000525232.5 ENST00000531767.1 |
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| CDS GCA 72 bp | TCACAGCATGTTCACCCACAGCCCTCAGCATTCAACTaGTGCCTGATACTCACCAACCACAGCTCTGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: SQHVHPQPSAFN*CLILTNHSSVG Trigger: GCCAACAGAGCTGTGGTTGGTGAGTATCAGGCAGCAGTTGAATGCTGAGGGCTGTGGGTGAACATGCTGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525232.5 |
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