Pregenerated sensors for RPL4 (Homo sapiens)
Ensembl gene IDs: ENSG00000174444Ensembl transcript IDs: ENST00000307961.11, ENST00000561554.5, ENST00000561775.5, ENST00000564517.1, ENST00000566491.1, ENST00000567229.5, ENST00000568588.5
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCGATAGGCCATTTGCGCACCAAGTGGTCAAACACCGTTTCAAATaGCCGGGTGAACAGCACTTCCAATGTGGTGTGCCACCAAGTGGC | + |
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Preference number: 1 (lower is better) Translates to: SDRPFAHQVVKHRFK*PGEQHFQCGVPPSG Trigger: GCCACTTGGTGGCACACCACATTGGAAGTGCTGTTCACCCGGTCATTTGAAACGGTGTTTGACCACTTGGTGCGCAAATGGCCTATCGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR TCA 90 bp | GCCATTTGCGCACCAAGTGGTCAAACACCGTTTCAAATGACCGGGTaGACAGCACTTCCAATGTGGTGTGCCACCAAGTGGCTATCTTTA | + |
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Preference number: 1 (lower is better) Translates to: AICAPSGQTPFQMTG*TALPMWCATKWLSL Trigger: TAAAGATAGCCACTTGGTGGCACACCACATTGGAAGTGCTGTTCACCCGGTCATTTGAAACGGTGTTTGACCACTTGGTGCGCAAATGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR GCA 90 bp | AACACCGTTTCAAATGACCGGGTGAACAGCACTTCCAATGTGGTGTaGCACCAAGTGGCTATCTTTAACCCCACAAAACTTGCACATGTG | + |
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Preference number: 1 (lower is better) Translates to: NTVSNDRVNSTSNVV*HQVAIFNPTKLAHV Trigger: CACATGTGCAAGTTTTGTGGGGTTAAAGATAGCCACTTGGTGGCACACCACATTGGAAGTGCTGTTCACCCGGTCATTTGAAACGGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR CCA 90 bp | TGGGTTTGGCTATCCTTTAATCCGATAGGCCATTTGCGCACCAAGTaGTCAAACACCGTTTCAAATGACCGGGTGAACAGCACTTCCAAT | + |
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Preference number: 1 (lower is better) Translates to: WVWLSFNPIGHLRTK*SNTVSNDRVNSTSN Trigger: ATTGGAAGTGCTGTTCACCCGGTCATTTGAAACGGTGTTTGACCACTTGGTGCGCAAATGGCCTATCGGATTAAAGGATAGCCAAACCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR-3UTR CCA 90 bp | CCCTGGAAATGGGGAGGGTTAACAGATCACCTTGGCTGTGAACTGAGACTGTCTGCAATGGTACAATCTTaGCTCATTGCAACCTCCACC | + |
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Preference number: 2 (lower is better) Translates to: PWKWGGLTDHLGCELRLSAMVQS*LIATST Trigger: GGTGGAGGTTGCAATGAGCCAAGATTGTACCATTGC...AGACAGTCTCAGTTCACAGCCAAGGTGATCTGTTAACCCTCCCCATTTCCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR-3UTR CCA 90 bp | GTCTTGACAGTTCGAGACTGTCAGAGAGAAGCTGACAGTTTAACAATCCAGATGCAGCCTCCAAGTAGCTaGGGTTACAGGCATGCACCA | + |
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Preference number: 2 (lower is better) Translates to: VLTVRDCQREADSLTIQMQPPSS*GYRHAP Trigger: TGGTGCATGCCTGTAACCCCAGCTACTTGGAGGCTG...CATCTGGATTGTTAAACTGTCAGCTTCTCTCTGACAGTCTCGAACTGTCAAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR-3UTR CCA 90 bp | TGGGTTTGGCTATCCTTTAATCCGATAGGCCATTTGCGCACCAAGTGGTCAAACCAGGCTGGAGGGCAATaGTACAATCTTGGCTCATTG | + |
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Preference number: 2 (lower is better) Translates to: WVWLSFNPIGHLRTKWSNQAGGQ*YNLGSL Trigger: CAATGAGCCAAGATTGTACCATTGCCCTCCAGCCTG...GTTTGACCACTTGGTGCGCAAATGGCCTATCGGATTAAAGGATAGCCAAACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR-3UTR CCA 90 bp | TGGGTTTGGCTATCCTTTAATCCGATAGGCCATTTGCGCACCAAGTGGTCAAACACAGCACTTCCAATGTaGTGTGCCACCAAGTGGCTA | + |
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Preference number: 2 (lower is better) Translates to: WVWLSFNPIGHLRTKWSNTALPM*CATKWL Trigger: TAGCCACTTGGTGGCACACCACATTGGAAGTGCTGT...GTTTGACCACTTGGTGCGCAAATGGCCTATCGGATTAAAGGATAGCCAAACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR-3UTR TCA 90 bp | GTCTTGACAGTTCGAGACTGTCAGAGAGAAGCTGACAGTTTAACAATCCAGATGCAGCCTCTGCGTTTCTaGCCAAGTCCTGTTACACCT | + |
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Preference number: 2 (lower is better) Translates to: VLTVRDCQREADSLTIQMQPLRF*PSPVTP Trigger: AGGTGTAACAGGACTTGGTCAGAAACGCAGAGGCTG...CATCTGGATTGTTAAACTGTCAGCTTCTCTCTGACAGTCTCGAACTGTCAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR-3UTR CCA 90 bp | GACACACAGGCAGTCCTGAAAAATGCTTCTGGTACTTTTCAGAGAGTCTTGCTCGCCAGTGTGGCCTTCTaGCACTTTTTCAAACCATGG | + |
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Preference number: 2 (lower is better) Translates to: DTQAVLKNASGTFQRVLLASVAF*HFFKPW Trigger: CCATGGTTTGAAAAAGTGCCAGAAGGCCACACTGGC...GAGCAAGACTCTCTGAAAAGTACCAGAAGCATTTTTCAGGACTGCCTGTGTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR-3UTR CCA 90 bp | GACACACAGGCAGTCCTGAAAAATGCTTCTGGTACTTTTCAGAGAGTCTTGCTCAGATGTGGGCCAGTGTaGCCTTCTGGCACTTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: DTQAVLKNASGTFQRVLLRCGPV*PSGTFS Trigger: TGAAAAAGTGCCAGAAGGCCACACTGGCCCACATCT...GAGCAAGACTCTCTGAAAAGTACCAGAAGCATTTTTCAGGACTGCCTGTGTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR-3UTR CCA 90 bp | AGACACACAGGCAGTCCTGAAAAATGCTTCTGGTACTTTTCAGAGAGTCTTGCTTTGGGATTACAGATGTaGGCCAGTGTGGCCTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: RHTGSPEKCFWYFSESLALGLQM*ASVAFW Trigger: CCAGAAGGCCACACTGGCCCACATCTGTAATCCCAA...AGCAAGACTCTCTGAAAAGTACCAGAAGCATTTTTCAGGACTGCCTGTGTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR CAA 90 bp | CCAATGTGGTGTGCCACCAAGTGGCTATCTTTAACCCCACAAAACTaGCACATGTGTTTGAAGGCAGGCACCAAATCAGTAGCACATGAA | + |
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Preference number: 2 (lower is better) Translates to: PMWCATKWLSLTPQN*HMCLKAGTKSVAHE Trigger: TTCATGTGCTACTGATTTGGTGCCTGCCTTCAAACACATGTGCAAGTTTTGTGGGGTTAAAGATAGCCACTTGGTGGCACACCACATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR-3UTR GCA 90 bp | CACCAAGTGGCTATCTTTAACCCCACAAAACTTGCACATGTGTTTGAAGGCAGGAACTTGAACAGCCTCTaGGTTTCTGACCAAGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: HQVAIFNPTKLAHVFEGRNLNSL*VSDQVL Trigger: CAGGACTTGGTCAGAAACGCAGAGGCTGTTCAAGTT...CCTGCCTTCAAACACATGTGCAAGTTTTGTGGGGTTAAAGATAGCCACTTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR CAA 90 bp | GCCACCAAGTGGCTATCTTTAACCCCACAAAACTTGCACATGTGTTaGAAGGCAGGCACCAAATCAGTAGCACATGAACTCTACTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: ATKWLSLTPQNLHMC*KAGTKSVAHELYCV Trigger: AACACAGTAGAGTTCATGTGCTACTGATTTGGTGCCTGCCTTCAAACACATGTGCAAGTTTTGTGGGGTTAAAGATAGCCACTTGGTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR-3UTR GCA 90 bp | GTCTTGACAGTTCGAGACTGTCAGAGAGAAGCTGACAGTTTAACAATCCAGATGCTGGGGTTACAGGCATaGACCATGACTGGCTATTTT | + |
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Preference number: 2 (lower is better) Translates to: VLTVRDCQREADSLTIQMLGLQA*TMTGYF Trigger: AAAATAGCCAGTCATGGTGCATGCCTGTAACCCCAG...CATCTGGATTGTTAAACTGTCAGCTTCTCTCTGACAGTCTCGAACTGTCAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR-3UTR GCA 90 bp | TGGGTTTGGCTATCCTTTAATCCGATAGGCCATTTGCGCACCAAGTGGTCAAACGGCAGTCCTGAAAAATaGTTCTGGTACTTTTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: WVWLSFNPIGHLRTKWSNGSPEK*FWYFSE Trigger: CTCTGAAAAGTACCAGAAGCATTTTTCAGGACTGCC...GTTTGACCACTTGGTGCGCAAATGGCCTATCGGATTAAAGGATAGCCAAACCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR-3UTR GCA 90 bp | AGACACACAGGCAGTCCTGAAAAATGCTTCTGGTACTTTTCAGAGAGTCTTGCTTGTGCTCTCCAGTTGTaGCCTCTTGTGGTTAAAGTT | + |
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Preference number: 2 (lower is better) Translates to: RHTGSPEKCFWYFSESLACALQL*PLVVKV Trigger: AACTTTAACCACAAGAGGGCACAACTGGAGAGCACA...AGCAAGACTCTCTGAAAAGTACCAGAAGCATTTTTCAGGACTGCCTGTGTGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR-3UTR CCA 90 bp | GTCTTGACAGTTCGAGACTGTCAGAGAGAAGCTGACAGTTTAACAATCCAGATGAACCTATTTTCCATCTaGTGGGGAGCTAAACTTGAA | + |
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Preference number: 2 (lower is better) Translates to: VLTVRDCQREADSLTIQMNLFSI*WGAKLE Trigger: TTCAAGTTTAGCTCCCCACCAGATGGAAAATAGGTT...CATCTGGATTGTTAAACTGTCAGCTTCTCTCTGACAGTCTCGAACTGTCAAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR-3UTR CCA 90 bp | GTCTTGACAGTTCGAGACTGTCAGAGAGAAGCTGACAGTTTAACAATCCAGATGAAACACCCTTATATCTaGAGGCATTTCATGGGTACT | + |
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Preference number: 2 (lower is better) Translates to: VLTVRDCQREADSLTIQMKHPYI*RHFMGT Trigger: AGTACCCATGAAATGCCTCCAGATATAAGGGTGTTT...CATCTGGATTGTTAAACTGTCAGCTTCTCTCTGACAGTCTCGAACTGTCAAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR CAA 90 bp | TCTTTACAGAATTTAACCTATTTTCCATCTGGTGGGGAGCTAAACTaGAACAGCCTCTGCGTTTCTGACCAAGTCCTGTTACACCTATTT | + |
|
Preference number: 2 (lower is better) Translates to: SLQNLTYFPSGGELN*NSLCVSDQVLLHLF Trigger: AAATAGGTGTAACAGGACTTGGTCAGAAACGCAGAGGCTGTTCAAGTTTAGCTCCCCACCAGATGGAAAATAGGTTAAATTCTGTAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR-3UTR TCA 90 bp | GTCTTGACAGTTCGAGACTGTCAGAGAGAAGCTGACAGTTTAACAATCCAGATGCATGGGTACTTCTTTTaGACACAGTTGGTTAACATA | + |
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Preference number: 2 (lower is better) Translates to: VLTVRDCQREADSLTIQMHGYFF*TQLVNI Trigger: TATGTTAACCAACTGTGTTCAAAAGAAGTACCCATG...CATCTGGATTGTTAAACTGTCAGCTTCTCTCTGACAGTCTCGAACTGTCAAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGAGAGAAGCTGACAGTTTAACAATCCAGATGCAAAACAAGACTTTTGACCTATTTTCCATCTGGTaGGGAGCTAAACTTGAACAG | + |
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Preference number: 2 (lower is better) Translates to: CQREADSLTIQMQNKTFDLFSIW*GAKLEQ Trigger: CTGTTCAAGTTTAGCTCCCCACCAGATGGAAAATAG...GTCAAAAGTCTTGTTTTGCATCTGGATTGTTAAACTGTCAGCTTCTCTCTGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR-3UTR CCA 90 bp | GTCTTGACAGTTCGAGACTGTCAGAGAGAAGCTGACAGTTTAACAATCCAGATGCACTTTTTCAAACCATaGGTGAAAATACTCAACTCT | + |
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Preference number: 2 (lower is better) Translates to: VLTVRDCQREADSLTIQMHFFKP*VKILNS Trigger: AGAGTTGAGTATTTTCACCCATGGTTTGAAAAAGTG...CATCTGGATTGTTAAACTGTCAGCTTCTCTCTGACAGTCTCGAACTGTCAAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR-3UTR GCA 90 bp | CAGTGTGGCCTTCTGGCACTTTTTCAAACCATGGGTGAAAATACTCAACTCTATCTTAGTATAAATCCATaGCCCATTTTATACCACACT | + |
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Preference number: 2 (lower is better) Translates to: QCGLLALFQTMGENTQLYLSINP*PILYHT Trigger: AGTGTGGTATAAAATGGGGCATGGATTTATACTAAG...ATAGAGTTGAGTATTTTCACCCATGGTTTGAAAAAGTGCCAGAAGGCCACACTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR TCA 72 bp | GCACCAAGTGGTCAAACACCGTTTCAAATGACCGGGTaGACAGCACTTCCAATGTGGTGTGCCACCAAGTGG | + |
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Preference number: 3 (lower is better) Translates to: APSGQTPFQMTG*TALPMWCATKW Trigger: CCACTTGGTGGCACACCACATTGGAAGTGCTGTTCACCCGGTCATTTGAAACGGTGTTTGACCACTTGGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR TCA 72 bp | CCATTTGCGCACCAAGTGGTCAAACACCGTTTCAAATaGCCGGGTGAACAGCACTTCCAATGTGGTGTGCCA | + |
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Preference number: 3 (lower is better) Translates to: PFAHQVVKHRFK*PGEQHFQCGVP Trigger: TGGCACACCACATTGGAAGTGCTGTTCACCCGGTCATTTGAAACGGTGTTTGACCACTTGGTGCGCAAATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR CCA 72 bp | CTATCCTTTAATCCGATAGGCCATTTGCGCACCAAGTaGTCAAACACCGTTTCAAATGACCGGGTGAACAGC | + |
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Preference number: 3 (lower is better) Translates to: LSFNPIGHLRTK*SNTVSNDRVNS Trigger: GCTGTTCACCCGGTCATTTGAAACGGTGTTTGACCACTTGGTGCGCAAATGGCCTATCGGATTAAAGGATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR-3UTR CAA 90 bp | GTCTTGACAGTTCGAGACTGTCAGAGAGAAGCTGACAGTTTAACAATCCAGATGGGTGGGGAGCTAAACTaGAACAGCCTCTGCGTTTCT | + |
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Preference number: 3 (lower is better) Translates to: VLTVRDCQREADSLTIQMGGELN*NSLCVS Trigger: AGAAACGCAGAGGCTGTTCAAGTTTAGCTCCCCACC...CATCTGGATTGTTAAACTGTCAGCTTCTCTCTGACAGTCTCGAACTGTCAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR-3UTR CAA 90 bp | GTCTTGACAGTTCGAGACTGTCAGAGAGAAGCTGACAGTTTAACAATCCAGATGTTGACCAGGCTGGTCTaGAACTCATTGGCTCAAGTG | + |
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Preference number: 3 (lower is better) Translates to: VLTVRDCQREADSLTIQMLTRLV*NSLAQV Trigger: CACTTGAGCCAATGAGTTCAAGACCAGCCTGGTCAA...CATCTGGATTGTTAAACTGTCAGCTTCTCTCTGACAGTCTCGAACTGTCAAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR-3UTR CAA 90 bp | TGGGTTTGGCTATCCTTTAATCCGATAGGCCATTTGCGCACCAAGTGGTCAAACAACTTGCACATGTGTTaGAAGGCAGGCACCAAATCA | + |
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Preference number: 3 (lower is better) Translates to: WVWLSFNPIGHLRTKWSNNLHMC*KAGTKS Trigger: TGATTTGGTGCCTGCCTTCAAACACATGTGCAAGTT...GTTTGACCACTTGGTGCGCAAATGGCCTATCGGATTAAAGGATAGCCAAACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR GCA 72 bp | TCAAATGACCGGGTGAACAGCACTTCCAATGTGGTGTaGCACCAAGTGGCTATCTTTAACCCCACAAAACTT | + |
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Preference number: 3 (lower is better) Translates to: SNDRVNSTSNVV*HQVAIFNPTKL Trigger: AAGTTTTGTGGGGTTAAAGATAGCCACTTGGTGGCACACCACATTGGAAGTGCTGTTCACCCGGTCATTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR TCA 72 bp | TTAACAGATCACCTTGGCTGTGAACTGAGACTGTCTTaGCAGTTCGAGACTGTCAGAGAGAAGCTGACAGTT | + |
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Preference number: 3 (lower is better) Translates to: LTDHLGCELRLS*QFETVREKLTV Trigger: AACTGTCAGCTTCTCTCTGACAGTCTCGAACTGTCAAGACAGTCTCAGTTCACAGCCAAGGTGATCTGTTAA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR GCA 72 bp | TTTCCATCTGGTGGGGAGCTAAACTTGAACAGCCTCTaGGTTTCTGACCAAGTCCTGTTACACCTATTTTTC | + |
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Preference number: 3 (lower is better) Translates to: FPSGGELNLNSL*VSDQVLLHLFF Trigger: GAAAAATAGGTGTAACAGGACTTGGTCAGAAACGCAGAGGCTGTTCAAGTTTAGCTCCCCACCAGATGGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR-3UTR CAA 90 bp | GTCTTGACAGTTCGAGACTGTCAGAGAGAAGCTGACAGTTTAACAATCCAGATGTCCAGTTGTGCCCTCTaGTGGTTAAAGTTAAATCTT | + |
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Preference number: 3 (lower is better) Translates to: VLTVRDCQREADSLTIQMSSCAL*WLKLNL Trigger: AAGATTTAACTTTAACCACAAGAGGGCACAACTGGA...CATCTGGATTGTTAAACTGTCAGCTTCTCTCTGACAGTCTCGAACTGTCAAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR-3UTR CAA 90 bp | TGTCAGAGAGAAGCTGACAGTTTAACAATCCAGATGCAAAACAAGACTTTTGACCGAGATTTCATCATGTaGACCAGGCTGGTCTTGAAC | + |
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Preference number: 3 (lower is better) Translates to: CQREADSLTIQMQNKTFDRDFIM*TRLVLN Trigger: GTTCAAGACCAGCCTGGTCAACATGATGAAATCTCG...GTCAAAAGTCTTGTTTTGCATCTGGATTGTTAAACTGTCAGCTTCTCTCTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR TCA 72 bp | GACTGTCTTGACAGTTCGAGACTGTCAGAGAGAAGCTaGCAGTTTAACAATCCAGATGCAAAACAAGACTTT | + |
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Preference number: 3 (lower is better) Translates to: DCLDSSRLSERS*QFNNPDAKQDF Trigger: AAAGTCTTGTTTTGCATCTGGATTGTTAAACTGTCAGCTTCTCTCTGACAGTCTCGAACTGTCAAGACAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR TCA 72 bp | CCCTTATATCTGGAGGCATTTCATGGGTACTTCTTTTaGACACAGTTGGTTAACATAATCACCAAGACACAC | + |
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Preference number: 3 (lower is better) Translates to: PLYLEAFHGYFF*TQLVNIITKTH Trigger: GTGTGTCTTGGTGATTATGTTAACCAACTGTGTTCAAAAGAAGTACCCATGAAATGCCTCCAGATATAAGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR CCA 90 bp | TGGGTTTGGCTATCCTTTAATCCGATAGGCCATTTGCGCACCAAGTGGTCAAACCAGCCTCCAAGTAGCTaGGGTTACAGGCATGCACCA | + |
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Preference number: 4 (lower is better) Translates to: WVWLSFNPIGHLRTKWSNQPPSS*GYRHAP Trigger: TGGTGCATGCCTGTAACCCCAGCTACTTGGAGGCTG...GTTTGACCACTTGGTGCGCAAATGGCCTATCGGATTAAAGGATAGCCAAACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR CCA 90 bp | CCCTGGAAATGGGGAGGGTTAACAGATCACCTTGGCTGTGAACTGAGACTGTCTCAGGCTGGAGGGCAATaGTACAATCTTGGCTCATTG | + |
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Preference number: 4 (lower is better) Translates to: PWKWGGLTDHLGCELRLSQAGGQ*YNLGSL Trigger: CAATGAGCCAAGATTGTACCATTGCCCTCCAGCCTG...AGACAGTCTCAGTTCACAGCCAAGGTGATCTGTTAACCCTCCCCATTTCCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR GCA 90 bp | GACACACAGGCAGTCCTGAAAAATGCTTCTGGTACTTTTCAGAGAGTCTTGCTCTGCGATGGATCTTCTTaGGTGGTGCTCGAAGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: DTQAVLKNASGTFQRVLLCDGSS*VVLEGL Trigger: GAGCCCTTCGAGCACCACGCAAGAAGATCCATCGCA...GAGCAAGACTCTCTGAAAAGTACCAGAAGCATTTTTCAGGACTGCCTGTGTGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR TCA 90 bp | CCCTGGAAATGGGGAGGGTTAACAGATCACCTTGGCTGTGAACTGAGACTGTCTACACACAGGCAGTCCTaGAAAATGCTTCTGGTACTT | + |
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Preference number: 4 (lower is better) Translates to: PWKWGGLTDHLGCELRLSTHRQS*KMLLVL Trigger: AAGTACCAGAAGCATTTTTCAGGACTGCCTGTGTGT...AGACAGTCTCAGTTCACAGCCAAGGTGATCTGTTAACCCTCCCCATTTCCAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR TCA 90 bp | AGACACACAGGCAGTCCTGAAAAATGCTTCTGGTACTTTTCAGAGAGTCTTGCTCAGCCTCTGCGTTTCTaGCCAAGTCCTGTTACACCT | + |
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Preference number: 4 (lower is better) Translates to: RHTGSPEKCFWYFSESLAQPLRF*PSPVTP Trigger: AGGTGTAACAGGACTTGGTCAGAAACGCAGAGGCTG...AGCAAGACTCTCTGAAAAGTACCAGAAGCATTTTTCAGGACTGCCTGTGTGTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR TCA 90 bp | GACACACAGGCAGTCCTGAAAAATGCTTCTGGTACTTTTCAGAGAGTCTTGCTCACCTTGGCTGTGAACTaGGACTGTCTTGACAGTTCG | + |
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Preference number: 4 (lower is better) Translates to: DTQAVLKNASGTFQRVLLTLAVN*DCLDSS Trigger: CGAACTGTCAAGACAGTCTCAGTTCACAGCCAAGGT...GAGCAAGACTCTCTGAAAAGTACCAGAAGCATTTTTCAGGACTGCCTGTGTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR CCA 90 bp | CACCAAGTGGCTATCTTTAACCCCACAAAACTTGCACATGTGTTTGAAGGCAGGAGATGTGGGCCAGTGTaGCCTTCTGGCACTTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: HQVAIFNPTKLAHVFEGRRCGPV*PSGTFS Trigger: TGAAAAAGTGCCAGAAGGCCACACTGGCCCACATCT...CCTGCCTTCAAACACATGTGCAAGTTTTGTGGGGTTAAAGATAGCCACTTGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR CCA 90 bp | GTCTTGACAGTTCGAGACTGTCAGAGAGAAGCTGACAGTTTAACAATCCAGATGTTGGGATTACAGATGTaGGCCAGTGTGGCCTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: VLTVRDCQREADSLTIQMLGLQM*ASVAFW Trigger: CCAGAAGGCCACACTGGCCCACATCTGTAATCCCAA...CATCTGGATTGTTAAACTGTCAGCTTCTCTCTGACAGTCTCGAACTGTCAAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR CCA 90 bp | TGGGTTTGGCTATCCTTTAATCCGATAGGCCATTTGCGCACCAAGTGGTCAAACGCAATGGTACAATCTTaGCTCATTGCAACCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: WVWLSFNPIGHLRTKWSNAMVQS*LIATST Trigger: GGTGGAGGTTGCAATGAGCCAAGATTGTACCATTGC...GTTTGACCACTTGGTGCGCAAATGGCCTATCGGATTAAAGGATAGCCAAACCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR CCA 90 bp | GACACACAGGCAGTCCTGAAAAATGCTTCTGGTACTTTTCAGAGAGTCTTGCTCACAGCACTTCCAATGTaGTGTGCCACCAAGTGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: DTQAVLKNASGTFQRVLLTALPM*CATKWL Trigger: TAGCCACTTGGTGGCACACCACATTGGAAGTGCTGT...GAGCAAGACTCTCTGAAAAGTACCAGAAGCATTTTTCAGGACTGCCTGTGTGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR GCA 90 bp | AATCATTCCCCTTCCACTGAACTCCATGGACTTAGTATAAATCCATGCCCCATTTGTGTTAAGAGGCCCTaGAGGGTAGGACTCACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NHSPSTELHGLSINPCPICVKRP*RVGLTV Trigger: CACTGTGAGTCCTACCCTGCAGGGCCTCTTAACACA...AATGGGGCATGGATTTATACTAAGTCCATGGAGTTCAGTGGAAGGGGAATGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR CCA 90 bp | CACCAAGTGGCTATCTTTAACCCCACAAAACTTGCACATGTGTTTGAAGGCAGGTGGTGTGCCACCAAGTaGCTATCTTTAACCCCACAA | + |
|
Preference number: 4 (lower is better) Translates to: HQVAIFNPTKLAHVFEGRWCATK*LSLTPQ Trigger: TTGTGGGGTTAAAGATAGCCACTTGGTGGCACACCA...CCTGCCTTCAAACACATGTGCAAGTTTTGTGGGGTTAAAGATAGCCACTTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR TCA 90 bp | GTCTTGACAGTTCGAGACTGTCAGAGAGAAGCTGACAGTTTAACAATCCAGATGGAACTGAGACTGTCTTaGCAGTTCGAGACTGTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLTVRDCQREADSLTIQMELRLS*QFETVR Trigger: TCTGACAGTCTCGAACTGTCAAGACAGTCTCAGTTC...CATCTGGATTGTTAAACTGTCAGCTTCTCTCTGACAGTCTCGAACTGTCAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR TCA 90 bp | AGACACACAGGCAGTCCTGAAAAATGCTTCTGGTACTTTTCAGAGAGTCTTGCTAGATCACCTTGGCTGTaGACTGAGACTGTCTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: RHTGSPEKCFWYFSESLARSPWL*TETVLT Trigger: TGTCAAGACAGTCTCAGTTCACAGCCAAGGTGATCT...AGCAAGACTCTCTGAAAAGTACCAGAAGCATTTTTCAGGACTGCCTGTGTGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR TCA 90 bp | GTCTTGACAGTTCGAGACTGTCAGAGAGAAGCTGACAGTTTAACAATCCAGATGGACGTGCTTAAGAACTaGGATTTGGCCCTGGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: VLTVRDCQREADSLTIQMDVLKN*DLALEM Trigger: CATTTCCAGGGCCAAATCTCAGTTCTTAAGCACGTC...CATCTGGATTGTTAAACTGTCAGCTTCTCTCTGACAGTCTCGAACTGTCAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR GCA 90 bp | GTCTTGACAGTTCGAGACTGTCAGAGAGAAGCTGACAGTTTAACAATCCAGATGAACTTGAACAGCCTCTaGGTTTCTGACCAAGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VLTVRDCQREADSLTIQMNLNSL*VSDQVL Trigger: CAGGACTTGGTCAGAAACGCAGAGGCTGTTCAAGTT...CATCTGGATTGTTAAACTGTCAGCTTCTCTCTGACAGTCTCGAACTGTCAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR CCA 90 bp | AGACACACAGGCAGTCCTGAAAAATGCTTCTGGTACTTTTCAGAGAGTCTTGCTATTTGGCCCTGGAAATaGGGAGGGTTAACAGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: RHTGSPEKCFWYFSESLAIWPWK*GGLTDH Trigger: GTGATCTGTTAACCCTCCCCATTTCCAGGGCCAAAT...AGCAAGACTCTCTGAAAAGTACCAGAAGCATTTTTCAGGACTGCCTGTGTGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR CAA 72 bp | TGTGCCACCAAGTGGCTATCTTTAACCCCACAAAACTaGCACATGTGTTTGAAGGCAGGCACCAAATCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: CATKWLSLTPQN*HMCLKAGTKSV Trigger: TACTGATTTGGTGCCTGCCTTCAAACACATGTGCAAGTTTTGTGGGGTTAAAGATAGCCACTTGGTGGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR TCA 90 bp | CACCAAGTGGCTATCTTTAACCCCACAAAACTTGCACATGTGTTTGAAGGCAGGCTGTCAGAGAGAAGCTaGCAGTTTAACAATCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HQVAIFNPTKLAHVFEGRLSERS*QFNNPD Trigger: ATCTGGATTGTTAAACTGTCAGCTTCTCTCTGACAG...CCTGCCTTCAAACACATGTGCAAGTTTTGTGGGGTTAAAGATAGCCACTTGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR TCA 90 bp | CAGTGTGGCCTTCTGGCACTTTTTCAAACCATGGGTGAAAATACTCAACTCTATACTTGCACATGTGTTTaGAGGCAGGCACCAAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: QCGLLALFQTMGENTQLYTCTCV*RQAPNQ Trigger: CTGATTTGGTGCCTGCCTTCAAACACATGTGCAAGT...ATAGAGTTGAGTATTTTCACCCATGGTTTGAAAAAGTGCCAGAAGGCCACACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR TCA 90 bp | CAGTGTGGCCTTCTGGCACTTTTTCAAACCATGGGTGAAAATACTCAACTCTATTTTCAAATGACCGGGTaGACAGCACTTCCAATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QCGLLALFQTMGENTQLYFQMTG*TALPMW Trigger: CCACATTGGAAGTGCTGTTCACCCGGTCATTTGAAA...ATAGAGTTGAGTATTTTCACCCATGGTTTGAAAAAGTGCCAGAAGGCCACACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR TCA 90 bp | AATCATTCCCCTTCCACTGAACTCCATGGACTTAGTATAAATCCATGCCCCATTAAACACCGTTTCAAATaGCCGGGTGAACAGCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: NHSPSTELHGLSINPCPIKHRFK*PGEQHF Trigger: GAAGTGCTGTTCACCCGGTCATTTGAAACGGTGTTT...AATGGGGCATGGATTTATACTAAGTCCATGGAGTTCAGTGGAAGGGGAATGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR CCA 90 bp | CAGTGTGGCCTTCTGGCACTTTTTCAAACCATGGGTGAAAATACTCAACTCTATTTAAGAACTGAGATTTaGCCCTGGAAATGGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QCGLLALFQTMGENTQLYLRTEI*PWKWGG Trigger: CCCTCCCCATTTCCAGGGCCAAATCTCAGTTCTTAA...ATAGAGTTGAGTATTTTCACCCATGGTTTGAAAAAGTGCCAGAAGGCCACACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| 3UTR CAA 72 bp | TGGCTATCTTTAACCCCACAAAACTTGCACATGTGTTaGAAGGCAGGCACCAAATCAGTAGCACATGAACTC | + |
|
Preference number: 4 (lower is better) Translates to: WLSLTPQNLHMC*KAGTKSVAHEL Trigger: GAGTTCATGTGCTACTGATTTGGTGCCTGCCTTCAAACACATGTGCAAGTTTTGTGGGGTTAAAGATAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR GCA 90 bp | AATCATTCCCCTTCCACTGAACTCCATGGACTTAGTATAAATCCATGCCCCATTACTTCCAATGTGGTGTaGCACCAAGTGGCTATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NHSPSTELHGLSINPCPITSNVV*HQVAIF Trigger: AAAGATAGCCACTTGGTGGCACACCACATTGGAAGT...AATGGGGCATGGATTTATACTAAGTCCATGGAGTTCAGTGGAAGGGGAATGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR CCA 90 bp | GACACACAGGCAGTCCTGAAAAATGCTTCTGGTACTTTTCAGAGAGTCTTGCTCAACCTATTTTCCATCTaGTGGGGAGCTAAACTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: DTQAVLKNASGTFQRVLLNLFSI*WGAKLE Trigger: TTCAAGTTTAGCTCCCCACCAGATGGAAAATAGGTT...GAGCAAGACTCTCTGAAAAGTACCAGAAGCATTTTTCAGGACTGCCTGTGTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR CCA 90 bp | CACCAAGTGGCTATCTTTAACCCCACAAAACTTGCACATGTGTTTGAAGGCAGGTCTGGAGGCATTTCATaGGTACTTCTTTTGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: HQVAIFNPTKLAHVFEGRSGGIS*VLLLNT Trigger: TGTGTTCAAAAGAAGTACCCATGAAATGCCTCCAGA...CCTGCCTTCAAACACATGTGCAAGTTTTGTGGGGTTAAAGATAGCCACTTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR CCA 90 bp | GTCTTGACAGTTCGAGACTGTCAGAGAGAAGCTGACAGTTTAACAATCCAGATGCATTTGCGCACCAAGTaGTCAAACACCGTTTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: VLTVRDCQREADSLTIQMHLRTK*SNTVSN Trigger: ATTTGAAACGGTGTTTGACCACTTGGTGCGCAAATG...CATCTGGATTGTTAAACTGTCAGCTTCTCTCTGACAGTCTCGAACTGTCAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR CCA 90 bp | GACACACAGGCAGTCCTGAAAAATGCTTCTGGTACTTTTCAGAGAGTCTTGCTCCCTGAAAAATGCTTCTaGTACTTTTCAGAGAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: DTQAVLKNASGTFQRVLLPEKCF*YFSESL Trigger: AAGACTCTCTGAAAAGTACCAGAAGCATTTTTCAGG...GAGCAAGACTCTCTGAAAAGTACCAGAAGCATTTTTCAGGACTGCCTGTGTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR GCA 90 bp | TCTTTACAGAATTTAACCTATTTTCCATCTGGTGGGGAGCTAAACTTGAACAGCTGTGCTCTCCAGTTGTaGCCTCTTGTGGTTAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SLQNLTYFPSGGELNLNSCALQL*PLVVKV Trigger: AACTTTAACCACAAGAGGGCACAACTGGAGAGCACA...GCTGTTCAAGTTTAGCTCCCCACCAGATGGAAAATAGGTTAAATTCTGTAAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR TCA 90 bp | AATCATTCCCCTTCCACTGAACTCCATGGACTTAGTATAAATCCATGCCCCATTCATGGGTACTTCTTTTaGACACAGTTGGTTAACATA | + |
|
Preference number: 4 (lower is better) Translates to: NHSPSTELHGLSINPCPIHGYFF*TQLVNI Trigger: TATGTTAACCAACTGTGTTCAAAAGAAGTACCCATG...AATGGGGCATGGATTTATACTAAGTCCATGGAGTTCAGTGGAAGGGGAATGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR GCA 90 bp | GTCTTGACAGTTCGAGACTGTCAGAGAGAAGCTGACAGTTTAACAATCCAGATGCTTAGTATAAATCCATaGCCCATTTTATACCACACT | + |
|
Preference number: 4 (lower is better) Translates to: VLTVRDCQREADSLTIQMLSINP*PILYHT Trigger: AGTGTGGTATAAAATGGGGCATGGATTTATACTAAG...CATCTGGATTGTTAAACTGTCAGCTTCTCTCTGACAGTCTCGAACTGTCAAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR GCA 90 bp | TCTTTACAGAATTTAACCTATTTTCCATCTGGTGGGGAGCTAAACTTGAACAGCGGCAGTCCTGAAAAATaGTTCTGGTACTTTTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLQNLTYFPSGGELNLNSGSPEK*FWYFSE Trigger: CTCTGAAAAGTACCAGAAGCATTTTTCAGGACTGCC...GCTGTTCAAGTTTAGCTCCCCACCAGATGGAAAATAGGTTAAATTCTGTAAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR CCA 90 bp | TCTTTACAGAATTTAACCTATTTTCCATCTGGTGGGGAGCTAAACTTGAACAGCCTATTTTCCATCTGGTaGGGAGCTAAACTTGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: SLQNLTYFPSGGELNLNSLFSIW*GAKLEQ Trigger: CTGTTCAAGTTTAGCTCCCCACCAGATGGAAAATAG...GCTGTTCAAGTTTAGCTCCCCACCAGATGGAAAATAGGTTAAATTCTGTAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR CCA 90 bp | TGTCAGAGAGAAGCTGACAGTTTAACAATCCAGATGCAAAACAAGACTTTTGACAAACACCCTTATATCTaGAGGCATTTCATGGGTACT | + |
|
Preference number: 4 (lower is better) Translates to: CQREADSLTIQMQNKTFDKHPYI*RHFMGT Trigger: AGTACCCATGAAATGCCTCCAGATATAAGGGTGTTT...GTCAAAAGTCTTGTTTTGCATCTGGATTGTTAAACTGTCAGCTTCTCTCTGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR CCA 90 bp | TGTCAGAGAGAAGCTGACAGTTTAACAATCCAGATGCAAAACAAGACTTTTGACAGTTGTGCCCTCTTGTaGTTAAAGTTAAATCTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: CQREADSLTIQMQNKTFDSCALL*LKLNLY Trigger: GTAAAGATTTAACTTTAACCACAAGAGGGCACAACT...GTCAAAAGTCTTGTTTTGCATCTGGATTGTTAAACTGTCAGCTTCTCTCTGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS CCA 90 bp | CTAAGCCTCTTGCCACTCTGGGGATCAGCGCTTTGCCAGCTTTCCTaGGGTCCAGGAGTTGGGGAGAGGCCGGTTCTCGGCTCCGGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LSLLPLWGSALCQLS*GPGVGERPVLGSGV Trigger: CACACCGGAGCCGAGAACCGGCCTCTCCCCAACTCCTGGACCCCAGGAAAGCTGGCAAAGCGCTGATCCCCAGAGTGGCAAGAGGCTTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000564517.1 ENST00000568588.5 |
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| CDS CCA 90 bp | TCCGGCGCGCAGTTCAGTTTGGCGGTTCCGGTACCGCTCTCACATTaGGGCGGGATGTGGGAGCGGCTGAACTGCGCAGCAGAGGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: SGAQFSLAVPVPLSH*GGMWERLNCAAEDF Trigger: AAAGTCCTCTGCTGCGCAGTTCAGCCGCTCCCACATCCCGCCCCAATGTGAGAGCGGTACCGGAACCGCCAAACTGAACTGCGCGCCGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564517.1 |
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| CDS CCA 90 bp | CTTTCCCTGGGTGTCTGGATCCCCGCCCTAAGCCTCTTGCCACTCTaGGGATCAGCGCTTTGCCAGCTTTCCTGGGGTCCAGGAGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LSLGVWIPALSLLPL*GSALCQLSWGPGVG Trigger: CCCAACTCCTGGACCCCAGGAAAGCTGGCAAAGCGCTGATCCCCAGAGTGGCAAGAGGCTTAGGGCGGGGATCCAGACACCCAGGGAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000564517.1 ENST00000568588.5 |
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| CDS TCA 90 bp | CGGTTCCGGTACCGCTCTCACATTGGGGCGGGATGTGGGAGCGGCTaGACTGCGCAGCAGAGGACTTTTATTCTCGTCTCCTTCAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RFRYRSHIGAGCGSG*TAQQRTFILVSFSE Trigger: CTCACTGAAGGAGACGAGAATAAAAGTCCTCTGCTGCGCAGTTCAGCCGCTCCCACATCCCGCCCCAATGTGAGAGCGGTACCGGAACCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564517.1 |
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| CDS TCA 90 bp | TATCAGTGGGCGAGCACACGCATTGGGGCGGGATGTGGGAGCGGCTaGACTGCGCAGCAGAGGACTTTTATTCTCGTCTCCTTCAGTGAG | + |
|
Preference number: 5 (lower is better) Translates to: YQWASTRIGAGCGSG*TAQQRTFILVSFSE Trigger: CTCACTGAAGGAGACGAGAATAAAAGTCCTCTGCTGCGCAGTTCAGCCGCTCCCACATCCCGCCCCAATGCGTGTGCTCGCCCACTGATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568588.5 |
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| CDS CCA 90 bp | TTCAGTTTGGCGGTTCCGGTACCGCTCTCACATTGGGGCGGGATGTaGGAGCGGCTGAACTGCGCAGCAGAGGACTTTTATTCTCGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FSLAVPVPLSHWGGM*ERLNCAAEDFYSRL Trigger: GAGACGAGAATAAAAGTCCTCTGCTGCGCAGTTCAGCCGCTCCCACATCCCGCCCCAATGTGAGAGCGGTACCGGAACCGCCAAACTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564517.1 |
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| CDS GCA 90 bp | GAGGCCGGTTCTCGGCTCCGGTGTGGGGTTGACCGTGTGGGAGCTTaGTTGTCTCAGGAGAAAACGTGTACGTCATCAAACGAGATGGAA | + |
|
Preference number: 5 (lower is better) Translates to: EAGSRLRCGVDRVGA*LSQEKTCTSSNEME Trigger: TTCCATCTCGTTTGATGACGTACACGTTTTCTCCTGAGACAAGCAAGCTCCCACACGGTCAACCCCACACCGGAGCCGAGAACCGGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000564517.1 ENST00000568588.5 |
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| CDS CCA 90 bp | CTTTTATTCTCGTCTCCTTCAGTGAGTCTAGTCTCTTCTTTTGGCTaGGGTCCTGGGACAGCACTTCTTTCCCTGGGTGTCTGGATCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLFSSPSVSLVSSFG*GPGTALLSLGVWIP Trigger: GGGGATCCAGACACCCAGGGAAAGAAGTGCTGTCCCAGGACCCCAGCCAAAAGAAGAGACTAGACTCACTGAAGGAGACGAGAATAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000564517.1 ENST00000568588.5 |
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| CDS-3UTR CAA 90 bp | CCCTGGAAATGGGGAGGGTTAACAGATCACCTTGGCTGTGAACTGAGACTGTCTCGAGATTTCATCATGTaGACCAGGCTGGTCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PWKWGGLTDHLGCELRLSRDFIM*TRLVLN Trigger: GTTCAAGACCAGCCTGGTCAACATGATGAAATCTCG...AGACAGTCTCAGTTCACAGCCAAGGTGATCTGTTAACCCTCCCCATTTCCAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR CAA 90 bp | TGGGTTTGGCTATCCTTTAATCCGATAGGCCATTTGCGCACCAAGTGGTCAAACAATCCGATAGGCCATTaGCGCACCAAGTGGTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: WVWLSFNPIGHLRTKWSNNPIGH*RTKWSN Trigger: GTTTGACCACTTGGTGCGCAAATGGCCTATCGGATT...GTTTGACCACTTGGTGCGCAAATGGCCTATCGGATTAAAGGATAGCCAAACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS CCA 90 bp | GAGCTTGCTTGTCTCAGGAGAAAACGTGTACGTCATCAAACGAGATaGAAGGTGGCAAGTGTTCCAAGAGGCGATTTATTCTTTCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ELACLRRKRVRHQTR*KVASVPRGDLFFLL Trigger: CAGCAGAAAGAATAAATCGCCTCTTGGAACACTTGCCACCTTCCATCTCGTTTGATGACGTACACGTTTTCTCCTGAGACAAGCAAGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564517.1 ENST00000568588.5 |
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| CDS TCA 90 bp | TCGTCAACCTTCTGTACCAGCTTACTGACAGCAGGCAACTGTCGCTaGGAACAGAGTAAGACGCAAATTACGACATCATTGCAAGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SSTFCTSLLTAGNCR*EQSKTQITTSLQAK Trigger: TTTTGCTTGCAATGATGTCGTAATTTGCGTCTTACTCTGTTCTCAGCGACAGTTGCCTGCTGTCAGTAAGCTGGTACAGAAGGTTGACGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567229.5 |
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| CDS-3UTR CAA 90 bp | AATCATTCCCCTTCCACTGAACTCCATGGACTTAGTATAAATCCATGCCCCATTTTGACCAGGCTGGTCTaGAACTCATTGGCTCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: NHSPSTELHGLSINPCPILTRLV*NSLAQV Trigger: CACTTGAGCCAATGAGTTCAAGACCAGCCTGGTCAA...AATGGGGCATGGATTTATACTAAGTCCATGGAGTTCAGTGGAAGGGGAATGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS-3UTR CAA 90 bp | TGTCAGAGAGAAGCTGACAGTTTAACAATCCAGATGCAAAACAAGACTTTTGACGGTGGGGAGCTAAACTaGAACAGCCTCTGCGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CQREADSLTIQMQNKTFDGGELN*NSLCVS Trigger: AGAAACGCAGAGGCTGTTCAAGTTTAGCTCCCCACC...GTCAAAAGTCTTGTTTTGCATCTGGATTGTTAAACTGTCAGCTTCTCTCTGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS TCA 90 bp | TTCTTGCTCAGTAAGAATTTTCGTCAACCTTCTGTACCAGCTTACTaGCAGCAGGCAACTGTCGCTGAGAACAGAGTAAGACGCAAATTA | + |
|
Preference number: 5 (lower is better) Translates to: FLLSKNFRQPSVPAY*QQATVAENRVRRKL Trigger: TAATTTGCGTCTTACTCTGTTCTCAGCGACAGTTGCCTGCTGTCAGTAAGCTGGTACAGAAGGTTGACGAAAATTCTTACTGAGCAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567229.5 |
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| CDS-3UTR CAA 90 bp | AATCATTCCCCTTCCACTGAACTCCATGGACTTAGTATAAATCCATGCCCCATTTTAACCCCACAAAACTaGCACATGTGTTTGAAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: NHSPSTELHGLSINPCPILTPQN*HMCLKA Trigger: TGCCTTCAAACACATGTGCAAGTTTTGTGGGGTTAA...AATGGGGCATGGATTTATACTAAGTCCATGGAGTTCAGTGGAAGGGGAATGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENST00000307961.11 |
||
| CDS TCA 90 bp | TTATCATCAATAAACCAGACCCAGGCCGCTAAATTCCATCAGAGATaGCCAGTCTTAGGTAGTGAAACAAAGGATACGTTTCCAAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSSINQTQAAKFHQR*PVLGSETKDTFPKA Trigger: TGCTTTTGGAAACGTATCCTTTGTTTCACTACCTAAGACTGGTCATCTCTGATGGAATTTAGCGGCCTGGGTCTGGTTTATTGATGATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000567229.5 |
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| CDS-3UTR CAA 90 bp | TGTCAGAGAGAAGCTGACAGTTTAACAATCCAGATGCAAAACAAGACTTTTGACAACTTGCACATGTGTTaGAAGGCAGGCACCAAATCA | + |
|
Preference number: 5 (lower is better) Translates to: CQREADSLTIQMQNKTFDNLHMC*KAGTKS Trigger: TGATTTGGTGCCTGCCTTCAAACACATGTGCAAGTT...GTCAAAAGTCTTGTTTTGCATCTGGATTGTTAAACTGTCAGCTTCTCTCTGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS TCA 90 bp | AGAAGAGATAAAAGTTGTAGCTGCTTCATCATACATACCAACCCATaGCTATTATGCATGGTAGCAAACAGCATCAGAACATCCGAGAAA | + |
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Preference number: 5 (lower is better) Translates to: RRDKSCSCFIIHTNP*LLCMVANSIRTSEK Trigger: TTTCTCGGATGTTCTGATGCTGTTTGCTACCATGCATAATAGTCATGGGTTGGTATGTATGATGAAGCAGCTACAACTTTTATCTCTTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000561554.5 ENST00000566491.1 |
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| CDS-3UTR CAA 90 bp | TGTCAGAGAGAAGCTGACAGTTTAACAATCCAGATGCAAAACAAGACTTTTGACTGCAAAACAAGACTTTaGACACAGGACAAGAGGTTA | + |
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Preference number: 5 (lower is better) Translates to: CQREADSLTIQMQNKTFDCKTRL*TQDKRL Trigger: TAACCTCTTGTCCTGTGTCAAAAGTCTTGTTTTGCA...GTCAAAAGTCTTGTTTTGCATCTGGATTGTTAAACTGTCAGCTTCTCTCTGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000307961.11 |
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| CDS CCA 72 bp | ACCCCTGACGTCGCCGGTCCGGCGCGCAGTTCAGTTTaGCGGTTCCGGTACCGCTCTCACATTGGGGCGGGA | + |
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Preference number: 6 (lower is better) Translates to: TPDVAGPARSSV*RFRYRSHIGAG Trigger: TCCCGCCCCAATGTGAGAGCGGTACCGGAACCGCCAAACTGAACTGCGCGCCGGACCGGCGACGTCAGGGGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564517.1 |
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| CDS CAA 90 bp | GTCCGGCGCGCAGTTCAGTTTGGCGGTTCCGGTACCGCTCTCACATaGGGGCGGGATGTGGGAGCGGCTGAACTGCGCAGCAGAGGACTT | + |
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Preference number: 6 (lower is better) Translates to: VRRAVQFGGSGTALT*GRDVGAAELRSRGL Trigger: AAGTCCTCTGCTGCGCAGTTCAGCCGCTCCCACATCCCGCCCCAATGTGAGAGCGGTACCGGAACCGCCAAACTGAACTGCGCGCCGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564517.1 |
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| CDS CCA 72 bp | ATCAGCGCTTTGCCAGCTTTCCTGGGGTCCAGGAGTTaGGGAGAGGCCGGTTCTCGGCTCCGGTGTGGGGTT | + |
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Preference number: 6 (lower is better) Translates to: ISALPAFLGSRS*GEAGSRLRCGV Trigger: AACCCCACACCGGAGCCGAGAACCGGCCTCTCCCCAACTCCTGGACCCCAGGAAAGCTGGCAAAGCGCTGAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000564517.1 ENST00000568588.5 |
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| CDS CCA 72 bp | TTGCCACTCTGGGGATCAGCGCTTTGCCAGCTTTCCTaGGGTCCAGGAGTTGGGGAGAGGCCGGTTCTCGGC | + |
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Preference number: 6 (lower is better) Translates to: LPLWGSALCQLS*GPGVGERPVLG Trigger: GCCGAGAACCGGCCTCTCCCCAACTCCTGGACCCCAGGAAAGCTGGCAAAGCGCTGATCCCCAGAGTGGCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000564517.1 ENST00000568588.5 |
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| CDS CAA 72 bp | GCAGTTCAGTTTGGCGGTTCCGGTACCGCTCTCACATaGGGGCGGGATGTGGGAGCGGCTGAACTGCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: AVQFGGSGTALT*GRDVGAAELRS Trigger: GCTGCGCAGTTCAGCCGCTCCCACATCCCGCCCCAATGTGAGAGCGGTACCGGAACCGCCAAACTGAACTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564517.1 |
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| CDS CCA 72 bp | GGTGTCTGGATCCCCGCCCTAAGCCTCTTGCCACTCTaGGGATCAGCGCTTTGCCAGCTTTCCTGGGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: GVWIPALSLLPL*GSALCQLSWGP Trigger: TGGACCCCAGGAAAGCTGGCAAAGCGCTGATCCCCAGAGTGGCAAGAGGCTTAGGGCGGGGATCCAGACACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000564517.1 ENST00000568588.5 |
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| CDS CCA 72 bp | CAGTTCAGTTTGGCGGTTCCGGTACCGCTCTCACATTaGGGCGGGATGTGGGAGCGGCTGAACTGCGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: QFSLAVPVPLSH*GGMWERLNCAA Trigger: TGCTGCGCAGTTCAGCCGCTCCCACATCCCGCCCCAATGTGAGAGCGGTACCGGAACCGCCAAACTGAACTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564517.1 |
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| CDS TCA 72 bp | GCGAGCACACGCATTGGGGCGGGATGTGGGAGCGGCTaGACTGCGCAGCAGAGGACTTTTATTCTCGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: ASTRIGAGCGSG*TAQQRTFILVS Trigger: GGAGACGAGAATAAAAGTCCTCTGCTGCGCAGTTCAGCCGCTCCCACATCCCGCCCCAATGCGTGTGCTCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568588.5 |
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| CDS CCA 72 bp | GCGGTTCCGGTACCGCTCTCACATTGGGGCGGGATGTaGGAGCGGCTGAACTGCGCAGCAGAGGACTTTTAT | + |
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Preference number: 6 (lower is better) Translates to: AVPVPLSHWGGM*ERLNCAAEDFY Trigger: ATAAAAGTCCTCTGCTGCGCAGTTCAGCCGCTCCCACATCCCGCCCCAATGTGAGAGCGGTACCGGAACCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564517.1 |
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| CDS CAA 72 bp | GTTGGGGAGAGGCCGGTTCTCGGCTCCGGTGTGGGGTaGACCGTGTGGGAGCTTGCTTGTCTCAGGAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: VGERPVLGSGVG*TVWELACLRRK Trigger: TTTTCTCCTGAGACAAGCAAGCTCCCACACGGTCAACCCCACACCGGAGCCGAGAACCGGCCTCTCCCCAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000564517.1 ENST00000568588.5 |
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| CDS CAA 72 bp | CTTTCCCTGGGTGTCTGGATCCCCGCCCTAAGCCTCTaGCCACTCTGGGGATCAGCGCTTTGCCAGCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: LSLGVWIPALSL*PLWGSALCQLS Trigger: GGAAAGCTGGCAAAGCGCTGATCCCCAGAGTGGCAAGAGGCTTAGGGCGGGGATCCAGACACCCAGGGAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000564517.1 ENST00000568588.5 |
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| CDS CCA 72 bp | AGGCCGGTTCTCGGCTCCGGTGTGGGGTTGACCGTGTaGGAGCTTGCTTGTCTCAGGAGAAAACGTGTACGT | + |
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Preference number: 6 (lower is better) Translates to: RPVLGSGVGLTV*ELACLRRKRVR Trigger: ACGTACACGTTTTCTCCTGAGACAAGCAAGCTCCCACACGGTCAACCCCACACCGGAGCCGAGAACCGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000564517.1 ENST00000568588.5 |
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| CDS TCA 72 bp | TACCGCTCTCACATTGGGGCGGGATGTGGGAGCGGCTaGACTGCGCAGCAGAGGACTTTTATTCTCGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: YRSHIGAGCGSG*TAQQRTFILVS Trigger: GGAGACGAGAATAAAAGTCCTCTGCTGCGCAGTTCAGCCGCTCCCACATCCCGCCCCAATGTGAGAGCGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564517.1 |
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| CDS CCA 72 bp | ATATCAGTGGGCGAGCACACGCATTGGGGCGGGATGTaGGAGCGGCTGAACTGCGCAGCAGAGGACTTTTAT | + |
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Preference number: 6 (lower is better) Translates to: ISVGEHTHWGGM*ERLNCAAEDFY Trigger: ATAAAAGTCCTCTGCTGCGCAGTTCAGCCGCTCCCACATCCCGCCCCAATGCGTGTGCTCGCCCACTGATAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568588.5 |
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| CDS CAA 90 bp | GCCGGTTCTCGGCTCCGGTGTGGGGTTGACCGTGTGGGAGCTTGCTaGTCTCAGGAGAAAACGTGTACGTCATCAAACGAGATGGAAGGT | + |
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Preference number: 6 (lower is better) Translates to: AGSRLRCGVDRVGAC*SQEKTCTSSNEMEG Trigger: ACCTTCCATCTCGTTTGATGACGTACACGTTTTCTCCTGAGACAAGCAAGCTCCCACACGGTCAACCCCACACCGGAGCCGAGAACCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000564517.1 ENST00000568588.5 |
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| CDS CAA 72 bp | CGGCTCCGGTGTGGGGTTGACCGTGTGGGAGCTTGCTaGTCTCAGGAGAAAACGTGTACGTCATCAAACGAG | + |
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Preference number: 6 (lower is better) Translates to: RLRCGVDRVGAC*SQEKTCTSSNE Trigger: CTCGTTTGATGACGTACACGTTTTCTCCTGAGACAAGCAAGCTCCCACACGGTCAACCCCACACCGGAGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000564517.1 ENST00000568588.5 |
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| CDS GCA 72 bp | TCTCGGCTCCGGTGTGGGGTTGACCGTGTGGGAGCTTaGTTGTCTCAGGAGAAAACGTGTACGTCATCAAAC | + |
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Preference number: 6 (lower is better) Translates to: SRLRCGVDRVGA*LSQEKTCTSSN Trigger: GTTTGATGACGTACACGTTTTCTCCTGAGACAAGCAAGCTCCCACACGGTCAACCCCACACCGGAGCCGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000564517.1 ENST00000568588.5 |
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| CDS CCA 72 bp | TCGTCTCCTTCAGTGAGTCTAGTCTCTTCTTTTGGCTaGGGTCCTGGGACAGCACTTCTTTCCCTGGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: SSPSVSLVSSFG*GPGTALLSLGV Trigger: GACACCCAGGGAAAGAAGTGCTGTCCCAGGACCCCAGCCAAAAGAAGAGACTAGACTCACTGAAGGAGACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564517.1 ENST00000568588.5 |
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| CDS CCA 72 bp | ATTCTCGTCTCCTTCAGTGAGTCTAGTCTCTTCTTTTaGCTGGGGTCCTGGGACAGCACTTCTTTCCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: ILVSFSESSLFF*LGSWDSTSFPG Trigger: CCCAGGGAAAGAAGTGCTGTCCCAGGACCCCAGCCAAAAGAAGAGACTAGACTCACTGAAGGAGACGAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000564517.1 ENST00000568588.5 |
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| CDS CAA 72 bp | CTAGGTGTTGGCATCCTTCCCCTGTTTAAAGCCTTGTaGACTCCAAGCTCCTTGCTTGTAGCTCGGATCCTG | + |
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Preference number: 6 (lower is better) Translates to: LGVGILPLFKAL*TPSSLLVARIL Trigger: CAGGATCCGAGCTACAAGCAAGGAGCTTGGAGTCAACAAGGCTTTAAACAGGGGAAGGATGCCAACACCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568588.5 |
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| CDS CAA 90 bp | GGATACGGAAAACTAGGTGTTGGCATCCTTCCCCTGTTTAAAGCCTaGTTGACTCCAAGCTCCTTGCTTGTAGCTCGGATCCTGTCATAC | + |
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Preference number: 6 (lower is better) Translates to: GYGKLGVGILPLFKA*LTPSSLLVARILSY Trigger: GTATGACAGGATCCGAGCTACAAGCAAGGAGCTTGGAGTCAACAAGGCTTTAAACAGGGGAAGGATGCCAACACCTAGTTTTCCGTATCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568588.5 |
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| CDS CAA 72 bp | AAACTAGGTGTTGGCATCCTTCCCCTGTTTAAAGCCTaGTTGACTCCAAGCTCCTTGCTTGTAGCTCGGATC | + |
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Preference number: 6 (lower is better) Translates to: KLGVGILPLFKA*LTPSSLLVARI Trigger: GATCCGAGCTACAAGCAAGGAGCTTGGAGTCAACAAGGCTTTAAACAGGGGAAGGATGCCAACACCTAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568588.5 |
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| CDS CCA 72 bp | GGAGAAAACGTGTACGTCATCAAACGAGATGGAAGGTaGCAAGTGTTCCAAGAGGCGATTTATTCTTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: GENVYVIKRDGR*QVFQEAIYSFC Trigger: GCAGAAAGAATAAATCGCCTCTTGGAACACTTGCCACCTTCCATCTCGTTTGATGACGTACACGTTTTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564517.1 ENST00000568588.5 |
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| CDS CCA 72 bp | TGTCTCAGGAGAAAACGTGTACGTCATCAAACGAGATaGAAGGTGGCAAGTGTTCCAAGAGGCGATTTATTC | + |
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Preference number: 6 (lower is better) Translates to: CLRRKRVRHQTR*KVASVPRGDLF Trigger: GAATAAATCGCCTCTTGGAACACTTGCCACCTTCCATCTCGTTTGATGACGTACACGTTTTCTCCTGAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000564517.1 ENST00000568588.5 |
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| CDS TCA 72 bp | AGTAAGAATTTTCGTCAACCTTCTGTACCAGCTTACTaGCAGCAGGCAACTGTCGCTGCTAATTCACTGACA | + |
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Preference number: 6 (lower is better) Translates to: SKNFRQPSVPAY*QQATVAANSLT Trigger: TGTCAGTGAATTAGCAGCGACAGTTGCCTGCTGTCAGTAAGCTGGTACAGAAGGTTGACGAAAATTCTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000561775.5 |
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| CDS TCA 72 bp | ATAAACCAGACCCAGGCCGCTAAATTCCATCAGAGATaGCCAGTCTTAGGTAGTGAAACAAAGGATACGTTT | + |
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Preference number: 6 (lower is better) Translates to: INQTQAAKFHQR*PVLGSETKDTF Trigger: AAACGTATCCTTTGTTTCACTACCTAAGACTGGTCATCTCTGATGGAATTTAGCGGCCTGGGTCTGGTTTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000567229.5 |
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