Pregenerated sensors for RPL39L (Homo sapiens)
Ensembl gene IDs: ENSG00000163923Ensembl transcript IDs: ENST00000296277.9, ENST00000433055.1, ENST00000455270.5
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CCCGGCCTAGCTGCAGCCACCTTGTCGCAGGGGCCTTGGTGTCTCTaGGACTCCGAGACGCCTCGCCCCCACCTGGCGTTCGGAGGCGGT | + |
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Preference number: 5 (lower is better) Translates to: PGLAAATLSQGPWCL*DSETPRPHLAFGGG Trigger: ACCGCCTCCGAACGCCAGGTGGGGGCGAGGCGTCTCGGAGTCTCAGAGACACCAAGGCCCCTGCGACAAGGTGGCTGCAGCTAGGCCGGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000296277.9 ENST00000455270.5 |
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| CDS TCA 90 bp | TCCCTCAGGTCTGCGTGTCACCGACCCGAACCCGCTCCGTCGTCCTaGCGCCCCCGGCCTAGCTGCAGCCACCTTGTCGCAGGGGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: SLRSACHRPEPAPSS*RPRPSCSHLVAGAL Trigger: CAAGGCCCCTGCGACAAGGTGGCTGCAGCTAGGCCGGGGGCGTCAGGACGACGGAGCGGGTTCGGGTCGGTGACACGCAGACCTGAGGGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000296277.9 ENST00000455270.5 |
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| CDS CCA 90 bp | AGGGGCCTTGGTGTCTCTGAGACTCCGAGACGCCTCGCCCCCACCTaGCGTTCGGAGGCGGTTGCCTCGCTGGGCGCAGCAATTCAACCG | + |
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Preference number: 5 (lower is better) Translates to: RGLGVSETPRRLAPT*RSEAVASLGAAIQP Trigger: CGGTTGAATTGCTGCGCCCAGCGAGGCAACCGCCTCCGAACGCCAGGTGGGGGCGAGGCGTCTCGGAGTCTCAGAGACACCAAGGCCCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000296277.9 ENST00000455270.5 |
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| CDS TCA 90 bp | TTTAAAATTGGTGAGATGTTCCTTGGGCTGGTCCGTCTGAGGACCTaGGGTCGTAGGTGGATCTTTCTCATGGAGCAAAGAACAGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: FKIGEMFLGLVRLRT*GRRWIFLMEQRTGG Trigger: TCCTCCTGTTCTTTGCTCCATGAGAAAGATCCACCTACGACCTCAGGTCCTCAGACGGACCAGCCCAAGGAACATCTCACCAATTTTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433055.1 |
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| CDS TCA 90 bp | ATATCTGATTTAAAATTGGTGAGATGTTCCTTGGGCTGGTCCGTCTaGGGACCTGAGGTCGTAGGTGGATCTTTCTCATGGAGCAAAGAA | + |
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Preference number: 5 (lower is better) Translates to: ISDLKLVRCSLGWSV*GPEVVGGSFSWSKE Trigger: TTCTTTGCTCCATGAGAAAGATCCACCTACGACCTCAGGTCCTCAGACGGACCAGCCCAAGGAACATCTCACCAATTTTAAATCAGATAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000433055.1 |
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| CDS GCA 72 bp | CGCGGGCGGAAAAGGCGGGCCCAGCTCCCTCAGGTCTaGGTGTCACCGACCCGAACCCGCTCCGTCGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: RGRKRRAQLPQV*VSPTRTRSVVL Trigger: CAGGACGACGGAGCGGGTTCGGGTCGGTGACACGCAGACCTGAGGGAGCTGGGCCCGCCTTTTCCGCCCGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000296277.9 ENST00000455270.5 |
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| CDS CCA 72 bp | TCGCCCCCACCTGGCGTTCGGAGGCGGTTGCCTCGCTaGGCGCAGCAATTCAACCGCCGCGCGCCGGATGCT | + |
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Preference number: 6 (lower is better) Translates to: SPPPGVRRRLPR*AQQFNRRAPDA Trigger: AGCATCCGGCGCGCGGCGGTTGAATTGCTGCGCCCAGCGAGGCAACCGCCTCCGAACGCCAGGTGGGGGCGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296277.9 |
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| CDS CAA 90 bp | CTGAGACTCCGAGACGCCTCGCCCCCACCTGGCGTTCGGAGGCGGTaGCCTCGCTGGGCGCAGCAATTCAACCGCCGCGCGCCGGATGCT | + |
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Preference number: 6 (lower is better) Translates to: LRLRDASPPPGVRRR*PRWAQQFNRRAPDA Trigger: AGCATCCGGCGCGCGGCGGTTGAATTGCTGCGCCCAGCGAGGCAACCGCCTCCGAACGCCAGGTGGGGGCGAGGCGTCTCGGAGTCTCAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000296277.9 |
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| CDS CCA 72 bp | GGTGTCTCTGAGACTCCGAGACGCCTCGCCCCCACCTaGCGTTCGGAGGCGGTTGCCTCGCTGGGCGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: GVSETPRRLAPT*RSEAVASLGAA Trigger: TGCTGCGCCCAGCGAGGCAACCGCCTCCGAACGCCAGGTGGGGGCGAGGCGTCTCGGAGTCTCAGAGACACC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000296277.9 ENST00000455270.5 |
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| CDS TCA 72 bp | TCTGCGTGTCACCGACCCGAACCCGCTCCGTCGTCCTaGCGCCCCCGGCCTAGCTGCAGCCACCTTGTCGCA | + |
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Preference number: 6 (lower is better) Translates to: SACHRPEPAPSS*RPRPSCSHLVA Trigger: TGCGACAAGGTGGCTGCAGCTAGGCCGGGGGCGTCAGGACGACGGAGCGGGTTCGGGTCGGTGACACGCAGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000296277.9 ENST00000455270.5 |
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| CDS CCA 72 bp | CCCACTCTAGGACGCAAATCTCGATCTGCAAGGGCCTaGGGCGCGGGCGGAAAAGGCGGGCCCAGCTCCCTC | + |
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Preference number: 6 (lower is better) Translates to: PTLGRKSRSARA*GAGGKGGPSSL Trigger: GAGGGAGCTGGGCCCGCCTTTTCCGCCCGCGCCCCAGGCCCTTGCAGATCGAGATTTGCGTCCTAGAGTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000296277.9 ENST00000455270.5 |
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| CDS TCA 72 bp | GGTGAGATGTTCCTTGGGCTGGTCCGTCTGAGGACCTaGGGTCGTAGGTGGATCTTTCTCATGGAGCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: GEMFLGLVRLRT*GRRWIFLMEQR Trigger: TCTTTGCTCCATGAGAAAGATCCACCTACGACCTCAGGTCCTCAGACGGACCAGCCCAAGGAACATCTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433055.1 |
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| CDS CAA 90 bp | ACCAAATTTCATGCGCGTCCATGTGAAGAGACCACCAAACAGGCTTaGTGTGAGCAACATGGCTGTTTATTTCACCTGGGTGCAGGCGGG | + |
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Preference number: 6 (lower is better) Translates to: TKFHARPCEETTKQA*CEQHGCLFHLGAGG Trigger: CCCGCCTGCACCCAGGTGAAATAAACAGCCATGTTGCTCACACAAAGCCTGTTTGGTGGTCTCTTCACATGGACGCGCATGAAATTTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433055.1 |
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| CDS CAA 72 bp | CATGCGCGTCCATGTGAAGAGACCACCAAACAGGCTTaGTGTGAGCAACATGGCTGTTTATTTCACCTGGGT | + |
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Preference number: 6 (lower is better) Translates to: HARPCEETTKQA*CEQHGCLFHLG Trigger: ACCCAGGTGAAATAAACAGCCATGTTGCTCACACAAAGCCTGTTTGGTGGTCTCTTCACATGGACGCGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000433055.1 |
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