Pregenerated sensors for RPL39 (Homo sapiens)
Ensembl gene IDs: ENSG00000198918Ensembl transcript IDs: ENST00000468844.1
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ATCCCTGCCCGACTCGGCAGCGGCCGGGCAAAGAAAGAGCCCCCTTaGATCCGCGGCCGCAGCGCAGCCCGTCCCTCTCCAGGTTGCTCG | + |
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Preference number: 5 (lower is better) Translates to: IPARLGSGRAKKEPP*IRGRSAARPSPGCS Trigger: CGAGCAACCTGGAGAGGGACGGGCTGCGCTGCGGCCGCGGATTCAAGGGGGCTCTTTCTTTGCCCGGCCGCTGCCGAGTCGGGCAGGGAT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS CCA 90 bp | GAATCCGCGGCCGCAGCGCAGCCCGTCCCTCTCCAGGTTGCTCGCTaGCTCACTAGCTTCCCTCCAGGCCACGAAAGACAACAGTGGCCG | + |
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Preference number: 5 (lower is better) Translates to: ESAAAAQPVPLQVAR*LTSFPPGHERQQWP Trigger: CGGCCACTGTTGTCTTTCGTGGCCTGGAGGGAAGCTAGTGAGCCAGCGAGCAACCTGGAGAGGGACGGGCTGCGCTGCGGCCGCGGATTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS GCA 90 bp | ACCAGTAGCCCACAATACCCTCCTGATTACCCTCCACGTTGCGCATaGCACGGGCAGCCCACAGTCAGGCCACGATTTCGGGGGTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: TSSPQYPPDYPPRCA*HGQPTVRPRFRGWL Trigger: CAGCCACCCCCGAAATCGTGGCCTGACTGTGGGCTGCCCGTGGCATGCGCAACGTGGAGGGTAATCAGGAGGGTATTGTGGGCTACTGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS GCA 90 bp | GCCTCCAGAACGAGTTCGCTACAAGCGAAGGGAAACCGGAATCCCTaGCCGACTCGGCAGCGGCCGGGCAAAGAAAGAGCCCCCTTGAAT | + |
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Preference number: 5 (lower is better) Translates to: ASRTSSLQAKGNRNP*PTRQRPGKERAPLN Trigger: ATTCAAGGGGGCTCTTTCTTTGCCCGGCCGCTGCCGAGTCGGGCAGGGATTCCGGTTTCCCTTCGCTTGTAGCGAACTCGTTCTGGAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS GCA 90 bp | TCGAAAACCAGTAGCCCACAATACCCTCCTGATTACCCTCCACGTTaGGCATGCCACGGGCAGCCCACAGTCAGGCCACGATTTCGGGGG | + |
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Preference number: 5 (lower is better) Translates to: SKTSSPQYPPDYPPR*ACHGQPTVRPRFRG Trigger: CCCCCGAAATCGTGGCCTGACTGTGGGCTGCCCGTGGCATGCGCAACGTGGAGGGTAATCAGGAGGGTATTGTGGGCTACTGGTTTTCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS CCA 90 bp | ATTTACCCTGTGGTCCCCCAAGGACTCAGACGACCACACTGGGAATaGCTAGGGAATCTGGCTTCCTGGGAAGAACACAGCTTTGAGTCA | + |
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Preference number: 5 (lower is better) Translates to: IYPVVPQGLRRPHWE*LGNLASWEEHSFES Trigger: TGACTCAAAGCTGTGTTCTTCCCAGGAAGCCAGATTCCCTAGCCATTCCCAGTGTGGTCGTCTGAGTCCTTGGGGGACCACAGGGTAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS CCA 90 bp | GGACTCAGACGACCACACTGGGAATGGCTAGGGAATCTGGCTTCCTaGGAAGAACACAGCTTTGAGTCAAACAGAACCACCTACCTACCA | + |
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Preference number: 5 (lower is better) Translates to: GLRRPHWEWLGNLAS*EEHSFESNRTTYLP Trigger: TGGTAGGTAGGTGGTTCTGTTTGACTCAAAGCTGTGTTCTTCCCAGGAAGCCAGATTCCCTAGCCATTCCCAGTGTGGTCGTCTGAGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS CCA 90 bp | CTTTCAATTTACCCTGTGGTCCCCCAAGGACTCAGACGACCACACTaGGAATGGCTAGGGAATCTGGCTTCCTGGGAAGAACACAGCTTT | + |
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Preference number: 5 (lower is better) Translates to: LSIYPVVPQGLRRPH*EWLGNLASWEEHSF Trigger: AAAGCTGTGTTCTTCCCAGGAAGCCAGATTCCCTAGCCATTCCCAGTGTGGTCGTCTGAGTCCTTGGGGGACCACAGGGTAAATTGAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS TCA 90 bp | CTGGGAATGGCTAGGGAATCTGGCTTCCTGGGAAGAACACAGCTTTaGGTCAAACAGAACCACCTACCTACCATTTGCAAGTCAACGAAT | + |
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Preference number: 5 (lower is better) Translates to: LGMARESGFLGRTQL*VKQNHLPTICKSTN Trigger: ATTCGTTGACTTGCAAATGGTAGGTAGGTGGTTCTGTTTGACTCAAAGCTGTGTTCTTCCCAGGAAGCCAGATTCCCTAGCCATTCCCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS GCA 90 bp | ACGGATGCAGGTTTAATGCCTGGCCAACCTGGACGAACATACCCTTaGATAATAATGGGAGCCAATACAAAGAAGGCAAAGATTACACCC | + |
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Preference number: 5 (lower is better) Translates to: TDAGLMPGQPGRTYP*IIMGANTKKAKITP Trigger: GGGTGTAATCTTTGCCTTCTTTGTATTGGCTCCCATTATTATGCAAGGGTATGTTCGTCCAGGTTGGCCAGGCATTAAACCTGCATCCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS GCA 90 bp | AGTGGAATCCGGTTAAGAAACATGCACAAAATCAGAGCATCAATGTaGAGAACCAGGATTCAAACCCAGGTCCTTTCTGCTCCACAGCCA | + |
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Preference number: 5 (lower is better) Translates to: SGIRLRNMHKIRASM*RTRIQTQVLSAPQP Trigger: TGGCTGTGGAGCAGAAAGGACCTGGGTTTGAATCCTGGTTCTGCACATTGATGCTCTGATTTTGTGCATGTTTCTTAACCGGATTCCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS GCA 90 bp | ATACTCCCCCAAATCTACAGAATAATCTTGCAAAATTGGCACGGATaGAGGTTTAATGCCTGGCCAACCTGGACGAACATACCCTTGCAT | + |
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Preference number: 5 (lower is better) Translates to: ILPQIYRIILQNWHG*RFNAWPTWTNIPLH Trigger: ATGCAAGGGTATGTTCGTCCAGGTTGGCCAGGCATTAAACCTGCATCCGTGCCAATTTTGCAAGATTATTCTGTAGATTTGGGGGAGTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS CCA 90 bp | ATCTTGCAAAATTGGCACGGATGCAGGTTTAATGCCTGGCCAACCTaGACGAACATACCCTTGCATAATAATGGGAGCCAATACAAAGAA | + |
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Preference number: 5 (lower is better) Translates to: ILQNWHGCRFNAWPT*TNIPLHNNGSQYKE Trigger: TTCTTTGTATTGGCTCCCATTATTATGCAAGGGTATGTTCGTCCAGGTTGGCCAGGCATTAAACCTGCATCCGTGCCAATTTTGCAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS CCA 90 bp | TACAGAATAATCTTGCAAAATTGGCACGGATGCAGGTTTAATGCCTaGCCAACCTGGACGAACATACCCTTGCATAATAATGGGAGCCAA | + |
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Preference number: 5 (lower is better) Translates to: YRIILQNWHGCRFNA*PTWTNIPLHNNGSQ Trigger: TTGGCTCCCATTATTATGCAAGGGTATGTTCGTCCAGGTTGGCCAGGCATTAAACCTGCATCCGTGCCAATTTTGCAAGATTATTCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS CAA 72 bp | CCGACTCGGCAGCGGCCGGGCAAAGAAAGAGCCCCCTaGAATCCGCGGCCGCAGCGCAGCCCGTCCCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: PTRQRPGKERAP*NPRPQRSPSLS Trigger: GGAGAGGGACGGGCTGCGCTGCGGCCGCGGATTCAAGGGGGCTCTTTCTTTGCCCGGCCGCTGCCGAGTCGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS TCA 72 bp | CGACTCGGCAGCGGCCGGGCAAAGAAAGAGCCCCCTTaGATCCGCGGCCGCAGCGCAGCCCGTCCCTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: RLGSGRAKKEPP*IRGRSAARPSP Trigger: TGGAGAGGGACGGGCTGCGCTGCGGCCGCGGATTCAAGGGGGCTCTTTCTTTGCCCGGCCGCTGCCGAGTCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS CAA 90 bp | AATCCCTGCCCGACTCGGCAGCGGCCGGGCAAAGAAAGAGCCCCCTaGAATCCGCGGCCGCAGCGCAGCCCGTCCCTCTCCAGGTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: NPCPTRQRPGKERAP*NPRPQRSPSLSRLL Trigger: GAGCAACCTGGAGAGGGACGGGCTGCGCTGCGGCCGCGGATTCAAGGGGGCTCTTTCTTTGCCCGGCCGCTGCCGAGTCGGGCAGGGATT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS CAA 72 bp | AATCCGCGGCCGCAGCGCAGCCCGTCCCTCTCCAGGTaGCTCGCTGGCTCACTAGCTTCCCTCCAGGCCACG | + |
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Preference number: 6 (lower is better) Translates to: NPRPQRSPSLSR*LAGSLASLQAT Trigger: CGTGGCCTGGAGGGAAGCTAGTGAGCCAGCGAGCAACCTGGAGAGGGACGGGCTGCGCTGCGGCCGCGGATT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS CAA 90 bp | GCCCCCTTGAATCCGCGGCCGCAGCGCAGCCCGTCCCTCTCCAGGTaGCTCGCTGGCTCACTAGCTTCCCTCCAGGCCACGAAAGACAAC | + |
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Preference number: 6 (lower is better) Translates to: APLNPRPQRSPSLSR*LAGSLASLQATKDN Trigger: GTTGTCTTTCGTGGCCTGGAGGGAAGCTAGTGAGCCAGCGAGCAACCTGGAGAGGGACGGGCTGCGCTGCGGCCGCGGATTCAAGGGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS GCA 72 bp | ACGAGTTCGCTACAAGCGAAGGGAAACCGGAATCCCTaGCCGACTCGGCAGCGGCCGGGCAAAGAAAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: TSSLQAKGNRNP*PTRQRPGKERA Trigger: GGCTCTTTCTTTGCCCGGCCGCTGCCGAGTCGGGCAGGGATTCCGGTTTCCCTTCGCTTGTAGCGAACTCGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS GCA 72 bp | CCACAATACCCTCCTGATTACCCTCCACGTTGCGCATaGCACGGGCAGCCCACAGTCAGGCCACGATTTCGG | + |
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Preference number: 6 (lower is better) Translates to: PQYPPDYPPRCA*HGQPTVRPRFR Trigger: CCGAAATCGTGGCCTGACTGTGGGCTGCCCGTGGCATGCGCAACGTGGAGGGTAATCAGGAGGGTATTGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS GCA 72 bp | AGTAGCCCACAATACCCTCCTGATTACCCTCCACGTTaGGCATGCCACGGGCAGCCCACAGTCAGGCCACGA | + |
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Preference number: 6 (lower is better) Translates to: SSPQYPPDYPPR*ACHGQPTVRPR Trigger: TCGTGGCCTGACTGTGGGCTGCCCGTGGCATGCGCAACGTGGAGGGTAATCAGGAGGGTATTGTGGGCTACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS CCA 72 bp | TACCCTGTGGTCCCCCAAGGACTCAGACGACCACACTaGGAATGGCTAGGGAATCTGGCTTCCTGGGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: YPVVPQGLRRPH*EWLGNLASWEE Trigger: TTCTTCCCAGGAAGCCAGATTCCCTAGCCATTCCCAGTGTGGTCGTCTGAGTCCTTGGGGGACCACAGGGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS CCA 72 bp | GCTCCACAGCCAGAGGCTACCTTTCAATTTACCCTGTaGTCCCCCAAGGACTCAGACGACCACACTGGGAAT | + |
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Preference number: 6 (lower is better) Translates to: APQPEATFQFTL*SPKDSDDHTGN Trigger: ATTCCCAGTGTGGTCGTCTGAGTCCTTGGGGGACCACAGGGTAAATTGAAAGGTAGCCTCTGGCTGTGGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS TCA 72 bp | GCTAGGGAATCTGGCTTCCTGGGAAGAACACAGCTTTaGGTCAAACAGAACCACCTACCTACCATTTGCAAG | + |
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Preference number: 6 (lower is better) Translates to: ARESGFLGRTQL*VKQNHLPTICK Trigger: CTTGCAAATGGTAGGTAGGTGGTTCTGTTTGACTCAAAGCTGTGTTCTTCCCAGGAAGCCAGATTCCCTAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS CCA 72 bp | AATTGGCACGGATGCAGGTTTAATGCCTGGCCAACCTaGACGAACATACCCTTGCATAATAATGGGAGCCAA | + |
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Preference number: 6 (lower is better) Translates to: NWHGCRFNAWPT*TNIPLHNNGSQ Trigger: TTGGCTCCCATTATTATGCAAGGGTATGTTCGTCCAGGTTGGCCAGGCATTAAACCTGCATCCGTGCCAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS CAA 90 bp | CACGGATGCAGGTTTAATGCCTGGCCAACCTGGACGAACATACCCTaGCATAATAATGGGAGCCAATACAAAGAAGGCAAAGATTACACC | + |
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Preference number: 6 (lower is better) Translates to: HGCRFNAWPTWTNIP*HNNGSQYKEGKDYT Trigger: GGTGTAATCTTTGCCTTCTTTGTATTGGCTCCCATTATTATGCAAGGGTATGTTCGTCCAGGTTGGCCAGGCATTAAACCTGCATCCGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS GCA 72 bp | GGTTTAATGCCTGGCCAACCTGGACGAACATACCCTTaGATAATAATGGGAGCCAATACAAAGAAGGCAAAG | + |
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Preference number: 6 (lower is better) Translates to: GLMPGQPGRTYP*IIMGANTKKAK Trigger: CTTTGCCTTCTTTGTATTGGCTCCCATTATTATGCAAGGGTATGTTCGTCCAGGTTGGCCAGGCATTAAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS CCA 72 bp | ATCTTGCAAAATTGGCACGGATGCAGGTTTAATGCCTaGCCAACCTGGACGAACATACCCTTGCATAATAAT | + |
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Preference number: 6 (lower is better) Translates to: ILQNWHGCRFNA*PTWTNIPLHNN Trigger: ATTATTATGCAAGGGTATGTTCGTCCAGGTTGGCCAGGCATTAAACCTGCATCCGTGCCAATTTTGCAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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| CDS CAA 72 bp | AGGTTTAATGCCTGGCCAACCTGGACGAACATACCCTaGCATAATAATGGGAGCCAATACAAAGAAGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: RFNAWPTWTNIP*HNNGSQYKEGK Trigger: TTTGCCTTCTTTGTATTGGCTCCCATTATTATGCAAGGGTATGTTCGTCCAGGTTGGCCAGGCATTAAACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468844.1 |
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