Pregenerated sensors for RPL38 (Homo sapiens)
Ensembl gene IDs: ENSG00000172809Ensembl transcript IDs: ENST00000311111.11, ENST00000439590.6, ENST00000529123.2, ENST00000530646.1, ENST00000533498.1, ENST00000534490.5
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGGTAGATGTGCTATACCTTGTTGCACCCATTTTGGGACCTGTTTaGATGGCATGCCCCACCATCGCTCCCACATCTGCCAGTTATGTT | + |
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Preference number: 1 (lower is better) Translates to: VVDVLYLVAPILGPV*MACPTIAPTSASYV Trigger: AACATAACTGGCAGATGTGGGAGCGATGGTGGGGCATGCCATTCAAACAGGTCCCAAAATGGGTGCAACAAGGTATAGCACATCTACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| 3UTR GCA 90 bp | TCCAAGTCAGTCAAGTTAGCGAGTGGTAGATGTGCTATACCTTGTTaGACCCATTTTGGGACCTGTTTGAATGGCATGCCCCACCATCGC | + |
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Preference number: 1 (lower is better) Translates to: SKSVKLASGRCAIPC*THFGTCLNGMPHHR Trigger: GCGATGGTGGGGCATGCCATTCAAACAGGTCCCAAAATGGGTGCAACAAGGTATAGCACATCTACCACTCGCTAACTTGACTGACTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| 3UTR TCA 90 bp | AACAGCAAGAGCAGATTCTTAGACCATAAAATGGGCTCTGAAATCTaGGAGGGATTCAAAACAAGATACAACATGGCCACACACAGCAAC | + |
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Preference number: 1 (lower is better) Translates to: NSKSRFLDHKMGSEI*EGFKTRYNMATHSN Trigger: GTTGCTGTGTGTGGCCATGTTGTATCTTGTTTTGAATCCCTCTCAGATTTCAGAGCCCATTTTATGGTCTAAGAATCTGCTCTTGCTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534490.5 |
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| 3UTR-3UTR GCA 90 bp | CCTCATTTGCCGACTGAGATCATGCTCAAGATTAGGGATGCACCGGGCACGGAGGATATCGCACCACTGTaGTCCAGGATGAGCCACAGA | + |
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Preference number: 2 (lower is better) Translates to: PHLPTEIMLKIRDAPGTEDIAPL*SRMSHR Trigger: TCTGTGGCTCATCCTGGAGCACAGTGGTGCGATATC...CTCCGTGCCCGGTGCATCCCTAATCTTGAGCATGATCTCAGTCGGCAAATGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| 3UTR CAA 90 bp | AGTGGTAGATGTGCTATACCTTGTTGCACCCATTTTGGGACCTGTTaGAATGGCATGCCCCACCATCGCTCCCACATCTGCCAGTTATGT | + |
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Preference number: 2 (lower is better) Translates to: SGRCAIPCCTHFGTC*NGMPHHRSHICQLC Trigger: ACATAACTGGCAGATGTGGGAGCGATGGTGGGGCATGCCATTCAAACAGGTCCCAAAATGGGTGCAACAAGGTATAGCACATCTACCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| 3UTR CCA 72 bp | TATGATGCCAGTCATTTCCAGAGGGGCTGCCCGCTGTaGCACAGCACCACCTGGTGGCCACCCCAACCCATG | + |
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Preference number: 3 (lower is better) Translates to: YDASHFQRGCPL*HSTTWWPPQPM Trigger: CATGGGTTGGGGTGGCCACCAGGTGGTGCTGTGCCACAGCGGGCAGCCCCTCTGGAAATGACTGGCATCATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| 3UTR TCA 72 bp | GTGCTATACCTTGTTGCACCCATTTTGGGACCTGTTTaGATGGCATGCCCCACCATCGCTCCCACATCTGCC | + |
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Preference number: 3 (lower is better) Translates to: VLYLVAPILGPV*MACPTIAPTSA Trigger: GGCAGATGTGGGAGCGATGGTGGGGCATGCCATTCAAACAGGTCCCAAAATGGGTGCAACAAGGTATAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| 3UTR GCA 72 bp | CTGAAAACAGATGGCCTCATTTGCCGACTGAGATCATaGTCAAGATTAGGGATGCACCGGGCACGGAGGCTC | + |
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Preference number: 3 (lower is better) Translates to: LKTDGLICRLRS*SRLGMHRARRL Trigger: GAGCCTCCGTGCCCGGTGCATCCCTAATCTTGAGCATGATCTCAGTCGGCAAATGAGGCCATCTGTTTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| 3UTR CCA 72 bp | TATACCTTGTTGCACCCATTTTGGGACCTGTTTGAATaGCATGCCCCACCATCGCTCCCACATCTGCCAGTT | + |
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Preference number: 3 (lower is better) Translates to: YTLLHPFWDLFE*HAPPSLPHLPV Trigger: AACTGGCAGATGTGGGAGCGATGGTGGGGCATGCCATTCAAACAGGTCCCAAAATGGGTGCAACAAGGTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| 3UTR GCA 72 bp | GTCAAGTTAGCGAGTGGTAGATGTGCTATACCTTGTTaGACCCATTTTGGGACCTGTTTGAATGGCATGCCC | + |
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Preference number: 3 (lower is better) Translates to: VKLASGRCAIPC*THFGTCLNGMP Trigger: GGGCATGCCATTCAAACAGGTCCCAAAATGGGTGCAACAAGGTATAGCACATCTACCACTCGCTAACTTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| 3UTR-3UTR CAA 90 bp | AGTGGTAGATGTGCTATACCTTGTTGCACCCATTTTGGGACCTGTTTGAATGGCCTACAAATACAAAAATaGGCCAGGCGTGGTGATGTG | + |
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Preference number: 3 (lower is better) Translates to: SGRCAIPCCTHFGTCLNGLQIQK*ARRGDV Trigger: CACATCACCACGCCTGGCCAATTTTTGTATTTGTAG...GCCATTCAAACAGGTCCCAAAATGGGTGCAACAAGGTATAGCACATCTACCACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| 3UTR TCA 72 bp | AGCAGATTCTTAGACCATAAAATGGGCTCTGAAATCTaGGAGGGATTCAAAACAAGATACAACATGGCCACA | + |
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Preference number: 3 (lower is better) Translates to: SRFLDHKMGSEI*EGFKTRYNMAT Trigger: TGTGGCCATGTTGTATCTTGTTTTGAATCCCTCTCAGATTTCAGAGCCCATTTTATGGTCTAAGAATCTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534490.5 |
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| 3UTR TCA 72 bp | CCAATGAAAGAGGTGTTAATATGGCTATTTTCCAACTaGGGAAACAGGCAAAAGTGTAGTCATTTCTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: PMKEVLIWLFSN*GNRQKCSHFSK Trigger: CTTGGAGAAATGACTACACTTTTGCCTGTTTCCTCAGTTGGAAAATAGCCATATTAACACCTCTTTCATTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| CDS-3UTR CCA 90 bp | TGCCAGTCATTTCCAGAGGGGCTGCCCGCTGTGGCACAGCACCACCTGGTGGCCCAATTTTCCGAGGCATaGCGACGAGGCGCGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: CQSFPEGLPAVAQHHLVAQFSEA*RRGALG Trigger: GCCCAGCGCGCCTCGTCGCCATGCCTCGGAAAATTG...GGCCACCAGGTGGTGCTGTGCCACAGCGGGCAGCCCCTCTGGAAATGACTGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| CDS-3UTR CCA 90 bp | TTGAACCCAGGAGGCGGAGGTGGTAGTGAGCTGATATCGCACCACTGTGCTCCAAGGCGCGCTGGGCTCTaGCGCGGACCAGGACCTTTC | + |
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Preference number: 4 (lower is better) Translates to: LNPGGGGGSELISHHCAPRRAGL*RGPGPF Trigger: GAAAGGTCCTGGTCCGCGCCAGAGCCCAGCGCGCCT...TGGAGCACAGTGGTGCGATATCAGCTCACTACCACCTCCGCCTCCTGGGTTCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| CDS-3UTR CCA 90 bp | TTGAACCCAGGAGGCGGAGGTGGTAGTGAGCTGATATCGCACCACTGTGCTCCAAGGGGCTGCCCGCTGTaGCACAGCACCACCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LNPGGGGGSELISHHCAPRGCPL*HSTTWW Trigger: CCACCAGGTGGTGCTGTGCCACAGCGGGCAGCCCCT...TGGAGCACAGTGGTGCGATATCAGCTCACTACCACCTCCGCCTCCTGGGTTCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| CDS-3UTR CCA 90 bp | AACAAGATACAACATGGCCACACACAGCAACCTTCCAAACCCCACCCGCCCCTGAGGCGCGCTGGGCTCTaGCGCGGACCAGGACCTTTC | + |
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Preference number: 4 (lower is better) Translates to: NKIQHGHTQQPSKPHPPLRRAGL*RGPGPF Trigger: GAAAGGTCCTGGTCCGCGCCAGAGCCCAGCGCGCCT...CAGGGGCGGGTGGGGTTTGGAAGGTTGCTGTGTGTGGCCATGTTGTATCTTGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534490.5 |
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| CDS-3UTR TCA 90 bp | AACAAGATACAACATGGCCACACACAGCAACCTTCCAAACCCCACCCGCCCCTGCACCCGCCCCTGAAGTaGCTTCAGGCTCACTCACCG | + |
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Preference number: 4 (lower is better) Translates to: NKIQHGHTQQPSKPHPPLHPPLK*LQAHSP Trigger: CGGTGAGTGAGCCTGAAGTCACTTCAGGGGCGGGTG...CAGGGGCGGGTGGGGTTTGGAAGGTTGCTGTGTGTGGCCATGTTGTATCTTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000534490.5 |
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| CDS-3UTR GCA 90 bp | CCGCGTCCTGTTCCCATCAGAAGCCACTACGAGGTAGCATTTTTCCCTTTCCCACATTTCCAGAGGGGCTaGCCGCTGTGGCACAGCACC | + |
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Preference number: 4 (lower is better) Translates to: PRPVPIRSHYEVAFFPFPHFQRG*PLWHST Trigger: GGTGCTGTGCCACAGCGGGCAGCCCCTCTGGAAATG...TGGGAAAGGGAAAAATGCTACCTCGTAGTGGCTTCTGATGGGAACAGGACGCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| CDS-3UTR GCA 90 bp | ACTGAGATCATGCTCAAGATTAGGGATGCACCGGGCACGGAGGCTCATGCCTGTGATATCGCACCACTGTaGTCCAGGATGAGCCACAGA | + |
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Preference number: 4 (lower is better) Translates to: TEIMLKIRDAPGTEAHACDIAPL*SRMSHR Trigger: TCTGTGGCTCATCCTGGAGCACAGTGGTGCGATATC...ACAGGCATGAGCCTCCGTGCCCGGTGCATCCCTAATCTTGAGCATGATCTCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| CDS-3UTR CCA 90 bp | TTGAACCCAGGAGGCGGAGGTGGTAGTGAGCTGATATCGCACCACTGTGCTCCACAGGCTGAAAACAGATaGCCTCATTTGCCGACTGAG | + |
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Preference number: 4 (lower is better) Translates to: LNPGGGGGSELISHHCAPQAENR*PHLPTE Trigger: CTCAGTCGGCAAATGAGGCCATCTGTTTTCAGCCTG...TGGAGCACAGTGGTGCGATATCAGCTCACTACCACCTCCGCCTCCTGGGTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| CDS-3UTR CCA 90 bp | CAACAGAACCCGCGTCCTGTTCCCATCAGAAGCCACTACGAGGTAGCATTTTTCTGGGACCTGTTTGAATaGCATGCCCCACCATCGCTC | + |
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Preference number: 4 (lower is better) Translates to: QQNPRPVPIRSHYEVAFFWDLFE*HAPPSL Trigger: GAGCGATGGTGGGGCATGCCATTCAAACAGGTCCCA...GAAAAATGCTACCTCGTAGTGGCTTCTGATGGGAACAGGACGCGGGTTCTGTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| 3UTR CAA 72 bp | TGTGCTATACCTTGTTGCACCCATTTTGGGACCTGTTaGAATGGCATGCCCCACCATCGCTCCCACATCTGC | + |
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Preference number: 4 (lower is better) Translates to: CAIPCCTHFGTC*NGMPHHRSHIC Trigger: GCAGATGTGGGAGCGATGGTGGGGCATGCCATTCAAACAGGTCCCAAAATGGGTGCAACAAGGTATAGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| CDS-3UTR GCA 90 bp | CCTCATTTGCCGACTGAGATCATGCTCAAGATTAGGGATGCACCGGGCACGGAGTGCCGACTGAGATCATaGTCAAGATTAGGGATGCAC | + |
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Preference number: 4 (lower is better) Translates to: PHLPTEIMLKIRDAPGTECRLRS*SRLGMH Trigger: GTGCATCCCTAATCTTGAGCATGATCTCAGTCGGCA...CTCCGTGCCCGGTGCATCCCTAATCTTGAGCATGATCTCAGTCGGCAAATGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| CDS-3UTR CCA 90 bp | GCTCTGAAATCTGAGAGGGATTCAAAACAAGATACAACATGGCCACACACAGCACAATTTTCCGAGGCATaGCGACGAGGCGCGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: ALKSERDSKQDTTWPHTAQFSEA*RRGALG Trigger: GCCCAGCGCGCCTCGTCGCCATGCCTCGGAAAATTG...TGCTGTGTGTGGCCATGTTGTATCTTGTTTTGAATCCCTCTCAGATTTCAGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534490.5 |
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| CDS-3UTR TCA 90 bp | CTGAAATCTGAGAGGGATTCAAAACAAGATACAACATGGCCACACACAGCAACCAACCCCACCCGCCCCTaGAGTGACTTCAGGCTCACT | + |
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Preference number: 4 (lower is better) Translates to: LKSERDSKQDTTWPHTATNPTRP*SDFRLT Trigger: AGTGAGCCTGAAGTCACTTCAGGGGCGGGTGGGGTT...GGTTGCTGTGTGTGGCCATGTTGTATCTTGTTTTGAATCCCTCTCAGATTTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000534490.5 |
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| CDS-3UTR GCA 90 bp | CCTCATTTGCCGACTGAGATCATGCTCAAGATTAGGGATGCACCGGGCACGGAGATGTTTAACCCCACGTaGTATTTCCATCATGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: PHLPTEIMLKIRDAPGTEMFNPT*YFHHGL Trigger: GAGGCCATGATGGAAATAGCACGTGGGGTTAAACAT...CTCCGTGCCCGGTGCATCCCTAATCTTGAGCATGATCTCAGTCGGCAAATGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| CDS-3UTR GCA 90 bp | CCTCATTTGCCGACTGAGATCATGCTCAAGATTAGGGATGCACCGGGCACGGAGTGTGCTATACCTTGTTaGACCCATTTTGGGACCTGT | + |
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Preference number: 4 (lower is better) Translates to: PHLPTEIMLKIRDAPGTECAIPC*THFGTC Trigger: ACAGGTCCCAAAATGGGTGCAACAAGGTATAGCACA...CTCCGTGCCCGGTGCATCCCTAATCTTGAGCATGATCTCAGTCGGCAAATGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| CDS-3UTR TCA 90 bp | CAGGAAGGCAGCAACAGAACCCGCGTCCTGTTCCCATCAGAAGCCACTACGAGGTATTTTCAAACAGGCTaGAAACAGATGGCCTCATTT | + |
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Preference number: 4 (lower is better) Translates to: QEGSNRTRVLFPSEATTRYFQTG*KQMASF Trigger: AAATGAGGCCATCTGTTTTCAGCCTGTTTGAAAATA...CCTCGTAGTGGCTTCTGATGGGAACAGGACGCGGGTTCTGTTGCTGCCTTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| CDS-3UTR GCA 90 bp | GAAAACAGATGGCCTCATTTGCCGACTGAGATCATGCTCAAGATTAGGGATGCAACAGATGGCCTCATTTaGCGACTGAGATCATGCTCA | + |
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Preference number: 4 (lower is better) Translates to: ENRWPHLPTEIMLKIRDATDGLI*RLRSCS Trigger: TGAGCATGATCTCAGTCGGCAAATGAGGCCATCTGT...TGCATCCCTAATCTTGAGCATGATCTCAGTCGGCAAATGAGGCCATCTGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| CDS-3UTR CCA 90 bp | TCCCACATCTGCCAGTTATGTTTAACCCCACGTGCTATTTCCATCATGGCCTCCTTGTTGCACCCATTTTaGGACCTGTTTGAATGGCAT | + |
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Preference number: 4 (lower is better) Translates to: SHICQLCLTPRAISIMASLLHPF*DLFEWH Trigger: ATGCCATTCAAACAGGTCCCAAAATGGGTGCAACAA...GGAGGCCATGATGGAAATAGCACGTGGGGTTAAACATAACTGGCAGATGTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| CDS-3UTR TCA 90 bp | CTGAAATCTGAGAGGGATTCAAAACAAGATACAACATGGCCACACACAGCAACCATGGGCTCTGAAATCTaGGAGGGATTCAAAACAAGA | + |
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Preference number: 4 (lower is better) Translates to: LKSERDSKQDTTWPHTATMGSEI*EGFKTR Trigger: TCTTGTTTTGAATCCCTCTCAGATTTCAGAGCCCAT...GGTTGCTGTGTGTGGCCATGTTGTATCTTGTTTTGAATCCCTCTCAGATTTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000534490.5 |
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| CDS-3UTR CCA 90 bp | TTTTCAAACAGGCTGAAAACAGATGGCCTCATTTGCCGACTGAGATCATGCTCAGTGCTATTTCCATCATaGCCTCCCCACATCTTATTT | + |
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Preference number: 4 (lower is better) Translates to: FSNRLKTDGLICRLRSCSVLFPS*PPHILF Trigger: AAATAAGATGTGGGGAGGCCATGATGGAAATAGCAC...TGAGCATGATCTCAGTCGGCAAATGAGGCCATCTGTTTTCAGCCTGTTTGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| 3UTR CAA 72 bp | CTTATTTTCAAACAGGCTGAAAACAGATGGCCTCATTaGCCGACTGAGATCATGCTCAAGATTAGGGATGCA | + |
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Preference number: 4 (lower is better) Translates to: LIFKQAENRWPH*PTEIMLKIRDA Trigger: TGCATCCCTAATCTTGAGCATGATCTCAGTCGGCAAATGAGGCCATCTGTTTTCAGCCTGTTTGAAAATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| CDS-3UTR TCA 90 bp | CATTTTTCCCTTTCCCATCCGCAAAGACGAAAGACACTTAGGATTTTTAGTATTATTTTGGGACCTGTTTaGATGGCATGCCCCACCATC | + |
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Preference number: 4 (lower is better) Translates to: HFSLSHPQRRKTLRIFSIILGPV*MACPTI Trigger: GATGGTGGGGCATGCCATTCAAACAGGTCCCAAAAT...AATACTAAAAATCCTAAGTGTCTTTCGTCTTTGCGGATGGGAAAGGGAAAAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| CDS-3UTR TCA 90 bp | CATTTTTCCCTTTCCCATCCGCAAAGACGAAAGACACTTAGGATTTTTAGTATTTGGCTATTTTCCAACTaGGGAAACAGGCAAAAGTGT | + |
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Preference number: 4 (lower is better) Translates to: HFSLSHPQRRKTLRIFSIWLFSN*GNRQKC Trigger: ACACTTTTGCCTGTTTCCTCAGTTGGAAAATAGCCA...AATACTAAAAATCCTAAGTGTCTTTCGTCTTTGCGGATGGGAAAGGGAAAAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| CDS CCA 90 bp | AAGGAAGCGGGTGAACAGAGAGGAAAGAGACACGTCTCCCGGCGATaGCCCAGTCCACCAGCTTCTCCCGGCCTCAGGAGATCCTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: KEAGEQRGKRHVSRR*PSPPASPGLRRSLG Trigger: TCCCAAGGATCTCCTGAGGCCGGGAGAAGCTGGTGGACTGGGCCATCGCCGGGAGACGTGTCTCTTTCCTCTCTGTTCACCCGCTTCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530646.1 |
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| CDS TCA 90 bp | GGGAAGACGCTCCCGGAGCGGTGCCAGGCTAGGCACCGCTCTTCTTaGACCTTCGGAGCAACCACTTACATTTGGCATCCTTTCGTCGGG | + |
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Preference number: 5 (lower is better) Translates to: GKTLPERCQARHRSS*TFGATTYIWHPFVG Trigger: CCCGACGAAAGGATGCCAAATGTAAGTGGTTGCTCCGAAGGTTCAAGAAGAGCGGTGCCTAGCCTGGCACCGCTCCGGGAGCGTCTTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000529123.2 ENST00000530646.1 |
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| CDS GCA 90 bp | CCTCCACGCGGACCTGGGGTCCCCAGATTTCACCTGGCAGTGGATTaGCCCAGATTACCTTTCTCACCCACGTATCACCCTAGAGACACT | + |
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Preference number: 5 (lower is better) Translates to: PPRGPGVPRFHLAVD*PRLPFSPTYHPRDT Trigger: AGTGTCTCTAGGGTGATACGTGGGTGAGAAAGGTAATCTGGGGCAATCCACTGCCAGGTGAAATCTGGGGACCCCAGGTCCGCGTGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000533498.1 |
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| CDS CCA 90 bp | GAGACTTCCGTTTCCGGGCAGTTAAACCCTCCCAACGGAGGAAACTaGGTACGGTGCCTGCCGAGGATCAAGACTCATGTAGGCGTTCGC | + |
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Preference number: 5 (lower is better) Translates to: ETSVSGQLNPPNGGN*VRCLPRIKTHVGVR Trigger: GCGAACGCCTACATGAGTCTTGATCCTCGGCAGGCACCGTACCCAGTTTCCTCCGTTGGGAGGGTTTAACTGCCCGGAAACGGAAGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439590.6 |
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| CDS-3UTR CAA 90 bp | AAGGCAGCAACAGAACCCGCGTCCTGTTCCCATCAGAAGCCACTACGAGGTAGCCATTTTGGGACCTGTTaGAATGGCATGCCCCACCAT | + |
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Preference number: 5 (lower is better) Translates to: KAATEPASCSHQKPLRGSHFGTC*NGMPHH Trigger: ATGGTGGGGCATGCCATTCAAACAGGTCCCAAAATG...GCTACCTCGTAGTGGCTTCTGATGGGAACAGGACGCGGGTTCTGTTGCTGCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| CDS-3UTR CAA 90 bp | GACAGTCGCTTGAACCCAGGAGGCGGAGGTGGTAGTGAGCTGATATCGCACCACATGTGCTATACCTTGTaGCACCCATTTTGGGACCTG | + |
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Preference number: 5 (lower is better) Translates to: DSRLNPGGGGGSELISHHMCYTL*HPFWDL Trigger: CAGGTCCCAAAATGGGTGCAACAAGGTATAGCACAT...GTGGTGCGATATCAGCTCACTACCACCTCCGCCTCCTGGGTTCAAGCGACTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| CDS-3UTR CAA 90 bp | TTGAACCCAGGAGGCGGAGGTGGTAGTGAGCTGATATCGCACCACTGTGCTCCACTACAAATACAAAAATaGGCCAGGCGTGGTGATGTG | + |
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Preference number: 5 (lower is better) Translates to: LNPGGGGGSELISHHCAPLQIQK*ARRGDV Trigger: CACATCACCACGCCTGGCCAATTTTTGTATTTGTAG...TGGAGCACAGTGGTGCGATATCAGCTCACTACCACCTCCGCCTCCTGGGTTCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| CDS-3UTR CAA 90 bp | AGTGGTAGATGTGCTATACCTTGTTGCACCCATTTTGGGACCTGTTTGAATGGCAACAGATGGCCTCATTaGCCGACTGAGATCATGCTC | + |
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Preference number: 5 (lower is better) Translates to: SGRCAIPCCTHFGTCLNGNRWPH*PTEIML Trigger: GAGCATGATCTCAGTCGGCAAATGAGGCCATCTGTT...GCCATTCAAACAGGTCCCAAAATGGGTGCAACAAGGTATAGCACATCTACCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000311111.11 |
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| CDS GCA 90 bp | CCAGCGACCACAGGATCACGAGGTAAACGACCATACTACACAGTGTaGCGTGCTCGATACATTACATGCAAATATCCAGCACTTTATTAC | + |
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Preference number: 5 (lower is better) Translates to: PATTGSRGKRPYYTV*RARYITCKYPALYY Trigger: GTAATAAAGTGCTGGATATTTGCATGTAATGTATCGAGCACGGCACACTGTGTAGTATGGTCGTTTACCTCGTGATCCTGTGGTCGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530646.1 |
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| CDS CCA 90 bp | TGTGTTAAGATTTTGCACAACTGCAGAGAACCTAAACAGTGTTTATaGGACGTGTGTTTTGAGGCTTTCGCGGAGTGGAGATTCCGTTCC | + |
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Preference number: 5 (lower is better) Translates to: CVKILHNCREPKQCL*DVCFEAFAEWRFRS Trigger: GGAACGGAATCTCCACTCCGCGAAAGCCTCAAAACACACGTCCCATAAACACTGTTTAGGTTCTCTGCAGTTGTGCAAAATCTTAACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000529123.2 ENST00000530646.1 |
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| CDS TCA 90 bp | ACTATATTATACGAAAGAAAACTGAACTCAGGGCGGCCTCTGAGATaGTCGCGATTAGCTAAAGATGGTCCTAGAAATTCCAGGGCCTCA | + |
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Preference number: 5 (lower is better) Translates to: TILYERKLNSGRPLR*SRLAKDGPRNSRAS Trigger: TGAGGCCCTGGAATTTCTAGGACCATCTTTAGCTAATCGCGATCATCTCAGAGGCCGCCCTGAGTTCAGTTTTCTTTCGTATAATATAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000529123.2 ENST00000530646.1 |
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| CDS CCA 90 bp | CCTAAACAGTGTTTATGGGACGTGTGTTTTGAGGCTTTCGCGGAGTaGAGATTCCGTTCCGACAATTTACTATATTATACGAAAGAAAAC | + |
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Preference number: 5 (lower is better) Translates to: PKQCLWDVCFEAFAE*RFRSDNLLYYTKEN Trigger: GTTTTCTTTCGTATAATATAGTAAATTGTCGGAACGGAATCTCCACTCCGCGAAAGCCTCAAAACACACGTCCCATAAACACTGTTTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000529123.2 ENST00000530646.1 |
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| CDS CCA 90 bp | AGTAACACAACTACCTCTCACACTTGGTGTAAAAATTTAAGTAAGTaGGCAGCAGAGATTGGCACCTATCCATCGAAAACCTGCTGTTTA | + |
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Preference number: 5 (lower is better) Translates to: SNTTTSHTWCKNLSK*AAEIGTYPSKTCCL Trigger: TAAACAGCAGGTTTTCGATGGATAGGTGCCAATCTCTGCTGCCCACTTACTTAAATTTTTACACCAAGTGTGAGAGGTAGTTGTGTTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000530646.1 |
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| CDS CCA 72 bp | GGTGAACAGAGAGGAAAGAGACACGTCTCCCGGCGATaGCCCAGTCCACCAGCTTCTCCCGGCCTCAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: GEQRGKRHVSRR*PSPPASPGLRR Trigger: TCTCCTGAGGCCGGGAGAAGCTGGTGGACTGGGCCATCGCCGGGAGACGTGTCTCTTTCCTCTCTGTTCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530646.1 |
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| CDS CCA 72 bp | TCTCCCTGTACACCAACCACCGTCTGGCACCACGGCTaGCAGAGCATTAGAGACGGCTGGTGTCTTAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: SPCTPTTVWHHG*QSIRDGWCLSP Trigger: TGGGCTAAGACACCAGCCGTCTCTAATGCTCTGCCAGCCGTGGTGCCAGACGGTGGTTGGTGTACAGGGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530646.1 |
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| CDS CAA 72 bp | AAAAATCAGCTAGGCATGGTGGCGCGCCCAGCTACTTaGAGGCAGGGGGATCGCTTGAACCTGGGAGGCGGT | + |
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Preference number: 6 (lower is better) Translates to: KNQLGMVARPAT*RQGDRLNLGGG Trigger: ACCGCCTCCCAGGTTCAAGCGATCCCCCTGCCTCAAAGTAGCTGGGCGCGCCACCATGCCTAGCTGATTTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000530646.1 |
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| CDS TCA 72 bp | CTCCCGGAGCGGTGCCAGGCTAGGCACCGCTCTTCTTaGACCTTCGGAGCAACCACTTACATTTGGCATCCT | + |
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Preference number: 6 (lower is better) Translates to: LPERCQARHRSS*TFGATTYIWHP Trigger: AGGATGCCAAATGTAAGTGGTTGCTCCGAAGGTTCAAGAAGAGCGGTGCCTAGCCTGGCACCGCTCCGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000529123.2 ENST00000530646.1 |
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| CDS CCA 72 bp | GTTTCCGGGCAGTTAAACCCTCCCAACGGAGGAAACTaGGTACGGTGCCTGCCGAGGATCAAGACTCATGTA | + |
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Preference number: 6 (lower is better) Translates to: VSGQLNPPNGGN*VRCLPRIKTHV Trigger: TACATGAGTCTTGATCCTCGGCAGGCACCGTACCCAGTTTCCTCCGTTGGGAGGGTTTAACTGCCCGGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439590.6 |
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| CDS GCA 72 bp | GCTGGTGTCTTAGCCCACCTTAACAGGCCTGTCCCATaGAACCTCACTTCCACATGTGACCTGATTCTCAGT | + |
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Preference number: 6 (lower is better) Translates to: AGVLAHLNRPVP*NLTSTCDLILS Trigger: ACTGAGAATCAGGTCACATGTGGAAGTGAGGTTGCATGGGACAGGCCTGTTAAGGTGGGCTAAGACACCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530646.1 |
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| CDS CAA 72 bp | GCAGAGAACCTAAACAGTGTTTATGGGACGTGTGTTTaGAGGCTTTCGCGGAGTGGAGATTCCGTTCCGACA | + |
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Preference number: 6 (lower is better) Translates to: AENLNSVYGTCV*RLSRSGDSVPT Trigger: TGTCGGAACGGAATCTCCACTCCGCGAAAGCCTCAAAACACACGTCCCATAAACACTGTTTAGGTTCTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000529123.2 ENST00000530646.1 |
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| CDS CAA 72 bp | AACTTGCTGAGAAGGGTAAGTTACCTGCAGGTAGAGTaGGGCTTCAAACTAGGCAGTGACCCCATATGGTCT | + |
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Preference number: 6 (lower is better) Translates to: NLLRRVSYLQVE*GFKLGSDPIWS Trigger: AGACCATATGGGGTCACTGCCTAGTTTGAAGCCCAACTCTACCTGCAGGTAACTTACCCTTCTCAGCAAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530646.1 |
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| CDS CAA 90 bp | TGCACAACTGCAGAGAACCTAAACAGTGTTTATGGGACGTGTGTTTaGAGGCTTTCGCGGAGTGGAGATTCCGTTCCGACAATTTACTAT | + |
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Preference number: 6 (lower is better) Translates to: CTTAENLNSVYGTCV*RLSRSGDSVPTIYY Trigger: ATAGTAAATTGTCGGAACGGAATCTCCACTCCGCGAAAGCCTCAAAACACACGTCCCATAAACACTGTTTAGGTTCTCTGCAGTTGTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000529123.2 ENST00000530646.1 |
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| CDS TCA 72 bp | TACGAAAGAAAACTGAACTCAGGGCGGCCTCTGAGATaGTCGCGATTAGCTAAAGATGGTCCTAGAAATTCC | + |
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Preference number: 6 (lower is better) Translates to: YERKLNSGRPLR*SRLAKDGPRNS Trigger: GGAATTTCTAGGACCATCTTTAGCTAATCGCGATCATCTCAGAGGCCGCCCTGAGTTCAGTTTTCTTTCGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000529123.2 ENST00000530646.1 |
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| CDS GCA 72 bp | ACAGGATCACGAGGTAAACGACCATACTACACAGTGTaGCGTGCTCGATACATTACATGCAAATATCCAGCA | + |
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Preference number: 6 (lower is better) Translates to: TGSRGKRPYYTV*RARYITCKYPA Trigger: TGCTGGATATTTGCATGTAATGTATCGAGCACGGCACACTGTGTAGTATGGTCGTTTACCTCGTGATCCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000530646.1 |
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| CDS CAA 90 bp | GTCGTGTTTAACTTGCTGAGAAGGGTAAGTTACCTGCAGGTAGAGTaGGGCTTCAAACTAGGCAGTGACCCCATATGGTCTGAAATAAAA | + |
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Preference number: 6 (lower is better) Translates to: VVFNLLRRVSYLQVE*GFKLGSDPIWSEIK Trigger: TTTTATTTCAGACCATATGGGGTCACTGCCTAGTTTGAAGCCCAACTCTACCTGCAGGTAACTTACCCTTCTCAGCAAGTTAAACACGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530646.1 |
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| CDS CAA 90 bp | CACCACCCTTTTAAAACACAATCAAACGGTGGTGTCGTGTTTAACTaGCTGAGAAGGGTAAGTTACCTGCAGGTAGAGTTGGGCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: HHPFKTQSNGGVVFN*LRRVSYLQVELGFK Trigger: TTTGAAGCCCAACTCTACCTGCAGGTAACTTACCCTTCTCAGCAAGTTAAACACGACACCACCGTTTGATTGTGTTTTAAAAGGGTGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000530646.1 |
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| CDS TCA 72 bp | CTTTCCCCTGTATGTACAAGCTGGGAAACAGACCTATaGCAGTCCAACTTAAACTCTGTGACTTTACAATGG | + |
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Preference number: 6 (lower is better) Translates to: LSPVCTSWETDL*QSNLNSVTLQW Trigger: CCATTGTAAAGTCACAGAGTTTAAGTTGGACTGTCATAGGTCTGTTTCCCAGCTTGTACATACAGGGGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530646.1 |
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| CDS GCA 72 bp | TGGGCAGCAGAGATTGGCACCTATCCATCGAAAACCTaGTGTTTAAGGTTTTTCATTAATCACCTTCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: WAAEIGTYPSKT*CLRFFINHLLS Trigger: GGAAAGAAGGTGATTAATGAAAAACCTTAAACAGCAGGTTTTCGATGGATAGGTGCCAATCTCTGCTGCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000530646.1 |
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| CDS CCA 72 bp | TGTTTATGGGACGTGTGTTTTGAGGCTTTCGCGGAGTaGAGATTCCGTTCCGACAATTTACTATATTATACG | + |
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Preference number: 6 (lower is better) Translates to: CLWDVCFEAFAE*RFRSDNLLYYT Trigger: CGTATAATATAGTAAATTGTCGGAACGGAATCTCCACTCCGCGAAAGCCTCAAAACACACGTCCCATAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000529123.2 ENST00000530646.1 |
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| CDS CAA 72 bp | TTTAAAACACAATCAAACGGTGGTGTCGTGTTTAACTaGCTGAGAAGGGTAAGTTACCTGCAGGTAGAGTTG | + |
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Preference number: 6 (lower is better) Translates to: FKTQSNGGVVFN*LRRVSYLQVEL Trigger: CAACTCTACCTGCAGGTAACTTACCCTTCTCAGCAAGTTAAACACGACACCACCGTTTGATTGTGTTTTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530646.1 |
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| CDS GCA 72 bp | CCATACTACACAGTGTGCCGTGCTCGATACATTACATaGAAATATCCAGCACTTTATTACAAAATGGATTTT | + |
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Preference number: 6 (lower is better) Translates to: PYYTVCRARYIT*KYPALYYKMDF Trigger: AAAATCCATTTTGTAATAAAGTGCTGGATATTTGCATGTAATGTATCGAGCACGGCACACTGTGTAGTATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000530646.1 |
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