Pregenerated sensors for RPL36 (Homo sapiens)
Ensembl gene IDs: ENSG00000130255Ensembl transcript IDs: ENST00000347512.8, ENST00000394580.2, ENST00000577222.5, ENST00000579649.5, ENST00000582380.6, ENST00000590786.5
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GGCGGCTTCCTCACCTGCTGCCCCGGGAAGGGTGGGCGGGCCACGGCTTTTGATCACCCGGAGAGGGTGTaGCTCAGAGCGGGCACCAGA | + |
|
Preference number: 2 (lower is better) Translates to: GGFLTCCPGKGGRATAFDHPERV*LRAGTR Trigger: TCTGGTGCCCGCTCTGAGCCACACCCTCTCCGGGTG...ATCAAAAGCCGTGGCCCGCCCACCCTTCCCGGGGCAGCAGGTGAGGAAGCCGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000347512.8 |
||
| 3UTR TCA 72 bp | CTGCTGCCCCGGGAAGGGTGGGCGGGCCACGGCTTTTaGTTCACGACCAGGCAGCACCCGGAGAGGGTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LLPREGWAGHGF*FTTRQHPERVW Trigger: CCACACCCTCTCCGGGTGCTGCCTGGTCGTGAATCAAAAGCCGTGGCCCGCCCACCCTTCCCGGGGCAGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000347512.8 |
||
| CDS-3UTR GCA 90 bp | CAGACAGGGGACTGCGGGCCCCCGACACACCCACACCCACCCACGGACAGCAGGGGCGGCTTCCTCACCTaGTGCCCCGGGAAGGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QTGDCGPPTHPHPPTDSRGGFLT*CPGKGG Trigger: CCCACCCTTCCCGGGGCAGCAGGTGAGGAAGCCGCC...CCTGCTGTCCGTGGGTGGGTGTGGGTGTGTCGGGGGCCCGCAGTCCCCTGTCTG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000347512.8 |
||
| CDS-3UTR TCA 90 bp | CAGTACGGCGGCTTCCTCACCTGCTGCCCCGGGAAGGGTGGGCGGGCCACGGCTGCGGGCCACGGCTTTTaGTTCACGACCAGGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QYGGFLTCCPGKGGRATAAGHGF*FTTRQH Trigger: GTGCTGCCTGGTCGTGAATCAAAAGCCGTGGCCCGC...AGCCGTGGCCCGCCCACCCTTCCCGGGGCAGCAGGTGAGGAAGCCGCCGTACTG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000347512.8 |
||
| CDS-3UTR CCA 90 bp | CCAGACAGGGGACTGCGGGCCCCCGACACACCCACACCCACCCACGGACAGCAGCACCCGGAGAGGGTGTaGCTCAGAGCGGGCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PDRGLRAPDTPTPTHGQQHPERV*LRAGTR Trigger: TCTGGTGCCCGCTCTGAGCCACACCCTCTCCGGGTG...CTGCTGTCCGTGGGTGGGTGTGGGTGTGTCGGGGGCCCGCAGTCCCCTGTCTGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000347512.8 |
||
| 3UTR CAA 72 bp | CCTGCTGCCCCGGGAAGGGTGGGCGGGCCACGGCTTTaGATTCACGACCAGGCAGCACCCGGAGAGGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PAAPGRVGGPRL*IHDQAAPGEGV Trigger: CACACCCTCTCCGGGTGCTGCCTGGTCGTGAATCAAAAGCCGTGGCCCGCCCACCCTTCCCGGGGCAGCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000347512.8 |
||
| CDS-3UTR GCA 90 bp | AAAGTCATTTGCAGTACGGCGGCTTCCTCACCTGCTGCCCCGGGAAGGGTGGGCGGCTTCCTCACCTGCTaGCCCGGGAAGGGTGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KVICSTAASSPAAPGRVGGFLTC*PGKGGR Trigger: CCGCCCACCCTTCCCGGGGCAGCAGGTGAGGAAGCC...GCCCACCCTTCCCGGGGCAGCAGGTGAGGAAGCCGCCGTACTGCAAATGACTTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000347512.8 |
||
| CDS-3UTR GCA 90 bp | CAGACAGGGGACTGCGGGCCCCCGACACACCCACACCCACCCACGGACAGCAGGATGATTAAAGTCATTTaGAGTACGGCGGCTTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QTGDCGPPTHPHPPTDSRMIKVI*STAASS Trigger: TGAGGAAGCCGCCGTACTGCAAATGACTTTAATCAT...CCTGCTGTCCGTGGGTGGGTGTGGGTGTGTCGGGGGCCCGCAGTCCCCTGTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000347512.8 |
||
| CDS CCA 90 bp | GCGCAGGCCAGAGAGGCAAGAACGGCACGCGCTCCCCCTGGCGGCTaGAGTCTTCCCCGCCGTTGCGCTGAGCATGCGCGACCGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AQAREARTARAPPGG*SLPRRCAEHARPSS Trigger: GGAGCTCGGTCGCGCATGCTCAGCGCAACGGCGGGGAAGACTCCAGCCGCCAGGGGGAGCGCGTGCCGTTCTTGCCTCTCTGGCCTGCGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000577222.5 ENST00000582380.6 |
||
| CDS TCA 90 bp | GGCACGCGCTCCCCCTGGCGGCTGGAGTCTTCCCCGCCGTTGCGCTaGGCATGCGCGACCGAGCTCCCTGAGCATGCGCGTTTACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GTRSPWRLESSPPLR*ACATELPEHARLLL Trigger: CAGGAGTAAACGCGCATGCTCAGGGAGCTCGGTCGCGCATGCTCAGCGCAACGGCGGGGAAGACTCCAGCCGCCAGGGGGAGCGCGTGCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000577222.5 ENST00000582380.6 |
||
| CDS GCA 90 bp | AGAACGGCACGCGCTCCCCCTGGCGGCTGGAGTCTTCCCCGCCGTTaGGCTGAGCATGCGCGACCGAGCTCCCTGAGCATGCGCGTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: RTARAPPGGWSLPRR*AEHARPSSLSMRVY Trigger: GTAAACGCGCATGCTCAGGGAGCTCGGTCGCGCATGCTCAGCGCAACGGCGGGGAAGACTCCAGCCGCCAGGGGGAGCGCGTGCCGTTCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000577222.5 ENST00000582380.6 |
||
| CDS TCA 90 bp | GGAGTCTTCCCCGCCGTTGCGCTGAGCATGCGCGACCGAGCTCCCTaGGCATGCGCGTTTACTCCTGCGAGCCCGGGAGCTGGAGTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: GVFPAVALSMRDRAP*ACAFTPASPGAGVG Trigger: TCCGACTCCAGCTCCCGGGCTCGCAGGAGTAAACGCGCATGCTCAGGGAGCTCGGTCGCGCATGCTCAGCGCAACGGCGGGGAAGACTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577222.5 ENST00000582380.6 |
||
| CDS-3UTR CAA 90 bp | GGCGGCTTCCTCACCTGCTGCCCCGGGAAGGGTGGGCGGGCCACGGCTTTTGATGGCGGGCCACGGCTTTaGATTCACGACCAGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GGFLTCCPGKGGRATAFDGGPRL*IHDQAA Trigger: TGCTGCCTGGTCGTGAATCAAAAGCCGTGGCCCGCC...ATCAAAAGCCGTGGCCCGCCCACCCTTCCCGGGGCAGCAGGTGAGGAAGCCGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000347512.8 |
||
| CDS GCA 90 bp | GCCCGAACGCGCGTTCTTTCAGGTCGAGAGCCTTTGCCCAAGCCATaGCCTCCGCCCTCCAAGAAACCCCCGACAACCTCCGCGCGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: ARTRVLSGREPLPKP*PPPSKKPPTTSARH Trigger: GTGCCGCGCGGAGGTTGTCGGGGGTTTCTTGGAGGGCGGAGGGCATGGCTTGGGCAAAGGCTCTCGACCTGAAAGAACGCGCGTTCGGGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590786.5 |
||
| CDS GCA 90 bp | GCTGAGCATGCGCGACCGAGCTCCCTGAGCATGCGCGTTTACTCCTaGGAGCCCGGGAGCTGGAGTCGGAACCAGTGGAGGTGGCTATGG | + |
|
Preference number: 5 (lower is better) Translates to: AEHARPSSLSMRVYS*EPGSWSRNQWRWLW Trigger: CCATAGCCACCTCCACTGGTTCCGACTCCAGCTCCCGGGCTCGCAGGAGTAAACGCGCATGCTCAGGGAGCTCGGTCGCGCATGCTCAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577222.5 ENST00000582380.6 |
||
| CDS CCA 90 bp | CCGAGCTCCCTGAGCATGCGCGTTTACTCCTGCGAGCCCGGGAGCTaGAGTCGGAACCAGTGGAGGTGGCTATGGCTGCTCTCCTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PSSLSMRVYSCEPGS*SRNQWRWLWLLSSL Trigger: GAGGGAGGAGAGCAGCCATAGCCACCTCCACTGGTTCCGACTCCAGCTCCCGGGCTCGCAGGAGTAAACGCGCATGCTCAGGGAGCTCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577222.5 ENST00000582380.6 |
||
| CDS CCA 90 bp | GCCGCTCTCAAGGTGCTCCCTCTGCCCCAGCGTGGATTGCACGGTTaGGAAAAACCCAGATGGGTGCCCGCCTTCGAGCACCAGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: AALKVLPLPQRGLHG*EKPRWVPAFEHQAG Trigger: TCCTGCCTGGTGCTCGAAGGCGGGCACCCATCTGGGTTTTTCCCAACCGTGCAATCCACGCTGGGGCAGAGGGAGCACCTTGAGAGCGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000590786.5 |
||
| CDS TCA 90 bp | CTATTTCGGGCCGACCCTTCTGCAGGAGAGCCTCAGTGTGGGCAGTaGGCACCAGGTGGGAGCCCAGACGCGCGTAGTGATAGGCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LFRADPSAGEPQCGQ*APGGSPDARSDRPA Trigger: AGCTGGCCTATCACTACGCGCGTCTGGGCTCCCACCTGGTGCTCACTGCCCACACTGAGGCTCTCCTGCAGAAGGGTCGGCCCGAAATAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000577222.5 |
||
| CDS CCA 90 bp | CAACCAACCATCCTCCAACCTGCACAGAGGACCCGGGAGTCCGGATaGCGGCGGATACCGGCAGTGCGGGAAACCACTTACCTGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QPTILQPAQRTRESG*RRIPAVRETTYLLL Trigger: GAGCAGCAGGTAAGTGGTTTCCCGCACTGCCGGTATCCGCCGCCATCCGGACTCCCGGGTCCTCTGTGCAGGTTGGAGGATGGTTGGTTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394580.2 |
||
| CDS GCA 90 bp | GCGAGCCCGGGAGCTGGAGTCGGAACCAGTGGAGGTGGCTATGGCTaGTCTCCTCCCTCTGCCTGTGAAATGAGTTCGAATCCCAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASPGAGVGTSGGGYG*SPPSACEMSSNPNS Trigger: GGAGTTGGGATTCGAACTCATTTCACAGGCAGAGGGAGGAGAGCAGCCATAGCCACCTCCACTGGTTCCGACTCCAGCTCCCGGGCTCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577222.5 ENST00000582380.6 |
||
| CDS GCA 90 bp | CTTAGTTCTGCGCCCGAACGCGCGTTCTTTCAGGTCGAGAGCCTTTaGCCAAGCCATGCCCTCCGCCCTCCAAGAAACCCCCGACAACCT | + |
|
Preference number: 5 (lower is better) Translates to: LSSAPERAFFQVESL*PSHALRPPRNPRQP Trigger: AGGTTGTCGGGGGTTTCTTGGAGGGCGGAGGGCATGGCTTGGGCAAAGGCTCTCGACCTGAAAGAACGCGCGTTCGGGCGCAGAACTAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590786.5 |
||
| CDS TCA 90 bp | CCAGTGGAGGTGGCTATGGCTGCTCTCCTCCCTCTGCCTGTGAAATaGGTTCGAATCCCAACTCCGCCTATTTCGGGCCGACCCCGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PVEVAMAALLPLPVK*VRIPTPPISGRPRS Trigger: TGAGCGGGGTCGGCCCGAAATAGGCGGAGTTGGGATTCGAACTCATTTCACAGGCAGAGGGAGGAGAGCAGCCATAGCCACCTCCACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000582380.6 |
||
| CDS TCA 90 bp | CGGAACCAGTGGAGGTGGCTATGGCTGCTCTCCTCCCTCTGCCTGTaGAATGAGTTCGAATCCCAACTCCGCCTATTTCGGGCCGACCCC | + |
|
Preference number: 5 (lower is better) Translates to: RNQWRWLWLLSSLCL*NEFESQLRLFRADP Trigger: GGGGTCGGCCCGAAATAGGCGGAGTTGGGATTCGAACTCATTTCACAGGCAGAGGGAGGAGAGCAGCCATAGCCACCTCCACTGGTTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000582380.6 |
||
| CDS TCA 90 bp | CCAGTGGAGGTGGCTATGGCTGCTCTCCTCCCTCTGCCTGTGAAATaGGTTCGAATCCCAACTCCGCCTATTTCGGGCCGACCCTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PVEVAMAALLPLPVK*VRIPTPPISGRPFC Trigger: GCAGAAGGGTCGGCCCGAAATAGGCGGAGTTGGGATTCGAACTCATTTCACAGGCAGAGGGAGGAGAGCAGCCATAGCCACCTCCACTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000577222.5 |
||
| CDS TCA 90 bp | CGGAACCAGTGGAGGTGGCTATGGCTGCTCTCCTCCCTCTGCCTGTaGAATGAGTTCGAATCCCAACTCCGCCTATTTCGGGCCGACCCT | + |
|
Preference number: 5 (lower is better) Translates to: RNQWRWLWLLSSLCL*NEFESQLRLFRADP Trigger: AGGGTCGGCCCGAAATAGGCGGAGTTGGGATTCGAACTCATTTCACAGGCAGAGGGAGGAGAGCAGCCATAGCCACCTCCACTGGTTCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000577222.5 |
||
| CDS CCA 90 bp | TTCTCTCGCGCTGCCGCGATTTCCCTGGCTACTTCCTCCCCTCTGTaGGTAGCTGTGAGAACCAAGGTATTAACGCCTAGCGCTTTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: FSRAAAISLATSSPL*VAVRTKVLTPSAFR Trigger: GCGAAAAGCGCTAGGCGTTAATACCTTGGTTCTCACAGCTACCCACAGAGGGGAGGAAGTAGCCAGGGAAATCGCGGCAGCGCGAGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590786.5 |
||
| CDS GCA 72 bp | CGCGCTCCCCCTGGCGGCTGGAGTCTTCCCCGCCGTTaGGCTGAGCATGCGCGACCGAGCTCCCTGAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: RAPPGGWSLPRR*AEHARPSSLSM Trigger: CATGCTCAGGGAGCTCGGTCGCGCATGCTCAGCGCAACGGCGGGGAAGACTCCAGCCGCCAGGGGGAGCGCG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000577222.5 ENST00000582380.6 |
||
| CDS TCA 72 bp | TCCCCCTGGCGGCTGGAGTCTTCCCCGCCGTTGCGCTaGGCATGCGCGACCGAGCTCCCTGAGCATGCGCGT | + |
|
Preference number: 6 (lower is better) Translates to: SPWRLESSPPLR*ACATELPEHAR Trigger: ACGCGCATGCTCAGGGAGCTCGGTCGCGCATGCTCAGCGCAACGGCGGGGAAGACTCCAGCCGCCAGGGGGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000577222.5 ENST00000582380.6 |
||
| CDS TCA 72 bp | CCCGCCGTTGCGCTGAGCATGCGCGACCGAGCTCCCTaGGCATGCGCGTTTACTCCTGCGAGCCCGGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: PAVALSMRDRAP*ACAFTPASPGA Trigger: AGCTCCCGGGCTCGCAGGAGTAAACGCGCATGCTCAGGGAGCTCGGTCGCGCATGCTCAGCGCAACGGCGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577222.5 ENST00000582380.6 |
||
| CDS CCA 72 bp | AGAGAGGCAAGAACGGCACGCGCTCCCCCTGGCGGCTaGAGTCTTCCCCGCCGTTGCGCTGAGCATGCGCGA | + |
|
Preference number: 6 (lower is better) Translates to: REARTARAPPGG*SLPRRCAEHAR Trigger: TCGCGCATGCTCAGCGCAACGGCGGGGAAGACTCCAGCCGCCAGGGGGAGCGCGTGCCGTTCTTGCCTCTCT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000577222.5 ENST00000582380.6 |
||
| CDS GCA 72 bp | GCGCGACCGAGCTCCCTGAGCATGCGCGTTTACTCCTaGGAGCCCGGGAGCTGGAGTCGGAACCAGTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: ARPSSLSMRVYS*EPGSWSRNQWR Trigger: CCTCCACTGGTTCCGACTCCAGCTCCCGGGCTCGCAGGAGTAAACGCGCATGCTCAGGGAGCTCGGTCGCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577222.5 ENST00000582380.6 |
||
| CDS CAA 90 bp | CGCCGCTCTCAAGGTGCTCCCTCTGCCCCAGCGTGGATTGCACGGTaGGGAAAAACCCAGATGGGTGCCCGCCTTCGAGCACCAGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RRSQGAPSAPAWIAR*GKTQMGARLRAPGR Trigger: CCTGCCTGGTGCTCGAAGGCGGGCACCCATCTGGGTTTTTCCCAACCGTGCAATCCACGCTGGGGCAGAGGGAGCACCTTGAGAGCGGCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000590786.5 |
||
| CDS GCA 72 bp | GCGCCCGAACGCGCGTTCTTTCAGGTCGAGAGCCTTTaGCCAAGCCATGCCCTCCGCCCTCCAAGAAACCCC | + |
|
Preference number: 6 (lower is better) Translates to: APERAFFQVESL*PSHALRPPRNP Trigger: GGGGTTTCTTGGAGGGCGGAGGGCATGGCTTGGGCAAAGGCTCTCGACCTGAAAGAACGCGCGTTCGGGCGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590786.5 |
||
| CDS CCA 72 bp | AGGGCCATGGCTGCACAGAGGACCCGGGAGTCCGGATaGCGGCGGATACCGGCAGTGCGGGAAACCACTTTT | + |
|
Preference number: 6 (lower is better) Translates to: RAMAAQRTRESG*RRIPAVRETTF Trigger: AAAAGTGGTTTCCCGCACTGCCGGTATCCGCCGCCATCCGGACTCCCGGGTCCTCTGTGCAGCCATGGCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000579649.5 |
||
| CDS CCA 72 bp | TACTCCTGCGAGCCCGGGAGCTGGAGTCGGAACCAGTaGAGGTGGCTATGGCTGCTCTCCTCCCTCTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: YSCEPGSWSRNQ*RWLWLLSSLCL Trigger: CAGGCAGAGGGAGGAGAGCAGCCATAGCCACCTCCACTGGTTCCGACTCCAGCTCCCGGGCTCGCAGGAGTA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577222.5 ENST00000582380.6 |
||
| CDS CCA 72 bp | CCGCGCCGCTCTCAAGGTGCTCCCTCTGCCCCAGCGTaGATTGCACGGTTGGGAAAAACCCAGATGGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PRRSQGAPSAPA*IARLGKTQMGA Trigger: GGCACCCATCTGGGTTTTTCCCAACCGTGCAATCCACGCTGGGGCAGAGGGAGCACCTTGAGAGCGGCGCGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000590786.5 |
||
| CDS CAA 72 bp | GCCGCTCTCAAGGTGCTCCCTCTGCCCCAGCGTGGATaGCACGGTTGGGAAAAACCCAGATGGGTGCCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: AALKVLPLPQRG*HGWEKPRWVPA Trigger: GGCGGGCACCCATCTGGGTTTTTCCCAACCGTGCAATCCACGCTGGGGCAGAGGGAGCACCTTGAGAGCGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000590786.5 |
||
| CDS GCA 72 bp | GGACCCGGGAGTCCGGATGGCGGCGGATACCGGCAGTaGGGGAAACCACTTTTCTTCTCCTTGGGCACCACA | + |
|
Preference number: 6 (lower is better) Translates to: GPGSPDGGGYRQ*GKPLFFSLGTT Trigger: TGTGGTGCCCAAGGAGAAGAAAAGTGGTTTCCCGCACTGCCGGTATCCGCCGCCATCCGGACTCCCGGGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000579649.5 |
||
| CDS GCA 72 bp | CCGCTCTCAAGGTGCTCCCTCTGCCCCAGCGTGGATTaGACGGTTGGGAAAAACCCAGATGGGTGCCCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PLSRCSLCPSVD*TVGKNPDGCPP Trigger: AGGCGGGCACCCATCTGGGTTTTTCCCAACCGTGCAATCCACGCTGGGGCAGAGGGAGCACCTTGAGAGCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000590786.5 |
||
| CDS CCA 72 bp | ATCCTCCAACCTGCACAGAGGACCCGGGAGTCCGGATaGCGGCGGATACCGGCAGTGCGGGAAACCACTTAC | + |
|
Preference number: 6 (lower is better) Translates to: ILQPAQRTRESG*RRIPAVRETTY Trigger: GTAAGTGGTTTCCCGCACTGCCGGTATCCGCCGCCATCCGGACTCCCGGGTCCTCTGTGCAGGTTGGAGGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394580.2 |
||
| CDS CCA 72 bp | CTGAGCATGCGCGTTTACTCCTGCGAGCCCGGGAGCTaGAGTCGGAACCAGTGGAGGTGGCTATGGCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: LSMRVYSCEPGS*SRNQWRWLWLL Trigger: GAGCAGCCATAGCCACCTCCACTGGTTCCGACTCCAGCTCCCGGGCTCGCAGGAGTAAACGCGCATGCTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577222.5 ENST00000582380.6 |
||
| CDS CCA 72 bp | CCCCAGCGTGGATTGCACGGTTGGGAAAAACCCAGATaGGTGCCCGCCTTCGAGCACCAGGCAGGAAGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: PQRGLHGWEKPR*VPAFEHQAGSP Trigger: GGGACTTCCTGCCTGGTGCTCGAAGGCGGGCACCCATCTGGGTTTTTCCCAACCGTGCAATCCACGCTGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000590786.5 |
||
| CDS CAA 72 bp | TGCGCCCGAACGCGCGTTCTTTCAGGTCGAGAGCCTTaGCCCAAGCCATGCCCTCCGCCCTCCAAGAAACCC | + |
|
Preference number: 6 (lower is better) Translates to: CARTRVLSGREP*PKPCPPPSKKP Trigger: GGGTTTCTTGGAGGGCGGAGGGCATGGCTTGGGCAAAGGCTCTCGACCTGAAAGAACGCGCGTTCGGGCGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590786.5 |
||
| CDS GCA 72 bp | CGCGTTCTTTCAGGTCGAGAGCCTTTGCCCAAGCCATaGCCTCCGCCCTCCAAGAAACCCCCGACAACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RVLSGREPLPKP*PPPSKKPPTTS Trigger: GGAGGTTGTCGGGGGTTTCTTGGAGGGCGGAGGGCATGGCTTGGGCAAAGGCTCTCGACCTGAAAGAACGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590786.5 |
||
| CDS CCA 72 bp | AAGGTGCTCCCTCTGCCCCAGCGTGGATTGCACGGTTaGGAAAAACCCAGATGGGTGCCCGCCTTCGAGCAC | + |
|
Preference number: 6 (lower is better) Translates to: KVLPLPQRGLHG*EKPRWVPAFEH Trigger: GTGCTCGAAGGCGGGCACCCATCTGGGTTTTTCCCAACCGTGCAATCCACGCTGGGGCAGAGGGAGCACCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000590786.5 |
||
| CDS GCA 72 bp | AGCGTGGATTGCACGGTTGGGAAAAACCCAGATGGGTaGCCGCCTTCGAGCACCAGGCAGGAAGTCCCACTC | + |
|
Preference number: 6 (lower is better) Translates to: SVDCTVGKNPDG*PPSSTRQEVPL Trigger: GAGTGGGACTTCCTGCCTGGTGCTCGAAGGCGGGCACCCATCTGGGTTTTTCCCAACCGTGCAATCCACGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000590786.5 |
||
| CDS TCA 72 bp | TGGAGGTGGCTATGGCTGCTCTCCTCCCTCTGCCTGTaGAATGAGTTCGAATCCCAACTCCGCCTATTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: WRWLWLLSSLCL*NEFESQLRLFR Trigger: CCGAAATAGGCGGAGTTGGGATTCGAACTCATTTCACAGGCAGAGGGAGGAGAGCAGCCATAGCCACCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577222.5 ENST00000582380.6 |
||