Pregenerated sensors for RPL32 (Homo sapiens)
Ensembl gene IDs: ENSG00000144713Ensembl transcript IDs: ENST00000396953.6, ENST00000396957.5, ENST00000429711.7, ENST00000434963.1, ENST00000452606.2
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGGCTTGGGAGCCACAAGCTTCTTCAAGTGTCTCAGAACCTACCTaGTGTGAGGGCCAAGTCTGTACCCCTCATACCCAGCCTCAACTG | + |
|
Preference number: 1 (lower is better) Translates to: VAWEPQASSSVSEPT*CEGQVCTPHTQPQL Trigger: CAGTTGAGGCTGGGTATGAGGGGTACAGACTTGGCCCTCACACCAGGTAGGTTCTGAGACACTTGAAGAAGCTTGTGGCTCCCAAGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| 3UTR TCA 90 bp | GTGAGGGCCAAGTCTGTACCCCTCATACCCAGCCTCAACTGGAGATaGCTAAGGCTAGTCTGTGCACTTGAGGCCACATTCCCCTGTTCA | + |
|
Preference number: 1 (lower is better) Translates to: VRAKSVPLIPSLNWR*LRLVCALEATFPCS Trigger: TGAACAGGGGAATGTGGCCTCAAGTGCACAGACTAGCCTTAGTCATCTCCAGTTGAGGCTGGGTATGAGGGGTACAGACTTGGCCCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| 3UTR TCA 90 bp | TTGGGAGCCACAAGCTTCTTCAAGTGTCTCAGAACCTACCTGGTGTaGGGGCCAAGTCTGTACCCCTCATACCCAGCCTCAACTGGAGAT | + |
|
Preference number: 1 (lower is better) Translates to: LGATSFFKCLRTYLV*GPSLYPSYPASTGD Trigger: ATCTCCAGTTGAGGCTGGGTATGAGGGGTACAGACTTGGCCCTCACACCAGGTAGGTTCTGAGACACTTGAAGAAGCTTGTGGCTCCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| 3UTR CCA 90 bp | AGTACCAGTCAAGAGGCTCAATTGTCACCAGTTAGGTCCCCGCCTTaGCAAACTGCTGTAACATTATACCTGAAGCAGCAGCTGGTGGGA | + |
|
Preference number: 1 (lower is better) Translates to: STSQEAQLSPVRSPP*QTAVTLYLKQQLVG Trigger: TCCCACCAGCTGCTGCTTCAGGTATAATGTTACAGCAGTTTGCCAAGGCGGGGACCTAACTGGTGACAATTGAGCCTCTTGACTGGTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| 3UTR GCA 90 bp | GCATCCCGTAAGAATCTGTGTAAGAAATTCATCTGGATATTTCCATaGATATTTTCTCAATTCTCACAAGCATCACATGGAATAACTTGT | + |
|
Preference number: 1 (lower is better) Translates to: ASRKNLCKKFIWIFP*IFSQFSQASHGITC Trigger: ACAAGTTATTCCATGTGATGCTTGTGAGAATTGAGAAAATATGCATGGAAATATCCAGATGAATTTCTTACACAGATTCTTACGGGATGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| 3UTR-3UTR TCA 90 bp | CCAGTCAAGAGGCTCAATTGTCACCAGTTAGGTCCCCGCCTTGGCAAACTGCTGGCTAGTCTGTGCACTTaGGGCCACATTCCCCTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: PVKRLNCHQLGPRLGKLLASLCT*GHIPLF Trigger: GAACAGGGGAATGTGGCCTCAAGTGCACAGACTAGC...CAGCAGTTTGCCAAGGCGGGGACCTAACTGGTGACAATTGAGCCTCTTGACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| 3UTR-3UTR TCA 90 bp | TCAAGTGTCTCAGAACCTACCTGGTGTGAGGGCCAAGTCTGTACCCCTCATACCCCCCTGTTCAAGGACTaGGTGTCCTTTACAAATCCC | + |
|
Preference number: 2 (lower is better) Translates to: SSVSEPTWCEGQVCTPHTPLFKD*VSFTNP Trigger: GGGATTTGTAAAGGACACTCAGTCCTTGAACAGGGG...GGTATGAGGGGTACAGACTTGGCCCTCACACCAGGTAGGTTCTGAGACACTTGA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| 3UTR-3UTR TCA 90 bp | CACAAGCTTCTTCAAGTGTCTCAGAACCTACCTGGTGTGAGGGCCAAGTCTGTAAGCCTCAACTGGAGATaGCTAAGGCTAGTCTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: HKLLQVSQNLPGVRAKSVSLNWR*LRLVCA Trigger: TGCACAGACTAGCCTTAGTCATCTCCAGTTGAGGCT...TACAGACTTGGCCCTCACACCAGGTAGGTTCTGAGACACTTGAAGAAGCTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| 3UTR-3UTR CCA 90 bp | AGCAAGGCTAAGAATGACTACTTGTGGCTTGGGAGCCACAAGCTTCTTCAAGTGCAAATCCCCTCCAAATaGGAGATTCCAAAGGGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: SKAKNDYLWLGSHKLLQVQIPSK*EIPKGL Trigger: AAGCCCCTTTGGAATCTCCCATTTGGAGGGGATTTG...CACTTGAAGAAGCTTGTGGCTCCCAAGCCACAAGTAGTCATTCTTAGCCTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| 3UTR-3UTR GCA 90 bp | GTAGAAAAGCTTTATTATACCCAGCGCAGCATTTCTGCTAAGTTGACCAGGATGAGGCTGAAGCAGGATTaGTTGAGCTCAGGAGTTCGG | + |
|
Preference number: 2 (lower is better) Translates to: VEKLYYTQRSISAKLTRMRLKQD*LSSGVR Trigger: CCGAACTCCTGAGCTCAAGCAATCCTGCTTCAGCCT...CATCCTGGTCAACTTAGCAGAAATGCTGCGCTGGGTATAATAAAGCTTTTCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGTTATAGGAGACTGAAAGTGCTTTTCCAGTTAACCGTGGTGGATTACCTGCAAATCCCCTCCAAATaGGAGATTCCAAAGGGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: EGYRRLKVLFQLTVVDYLQIPSK*EIPKGL Trigger: AAGCCCCTTTGGAATCTCCCATTTGGAGGGGATTTG...CAGGTAATCCACCACGGTTAACTGGAAAAGCACTTTCAGTCTCCTATAACCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| 3UTR-3UTR TCA 90 bp | GTAGAAAAGCTTTATTATACCCAGCGCAGCATTTCTGCTAAGTTGACCAGGATGAGCCTCAACTGGAGATaGCTAAGGCTAGTCTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: VEKLYYTQRSISAKLTRMSLNWR*LRLVCA Trigger: TGCACAGACTAGCCTTAGTCATCTCCAGTTGAGGCT...CATCCTGGTCAACTTAGCAGAAATGCTGCGCTGGGTATAATAAAGCTTTTCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| 3UTR-3UTR CCA 90 bp | AGCAGCTGGTGGGAGGGTTATAGGAGACTGAAAGTGCTTTTCCAGTTAACCGTGCTCACAAGCATCACATaGAATAACTTGTCACCTAAC | + |
|
Preference number: 2 (lower is better) Translates to: SSWWEGYRRLKVLFQLTVLTSIT*NNLSPN Trigger: GTTAGGTGACAAGTTATTCCATGTGATGCTTGTGAG...CACGGTTAACTGGAAAAGCACTTTCAGTCTCCTATAACCCTCCCACCAGCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| 3UTR-3UTR CCA 90 bp | AGCAAGGCTAAGAATGACTACTTGTGGCTTGGGAGCCACAAGCTTCTTCAAGTGAAAGAACAATCTCTGTaGCAAACTAAGTTGGCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: SKAKNDYLWLGSHKLLQVKEQSL*QTKLAK Trigger: CTTGGCCAACTTAGTTTGCCACAGAGATTGTTCTTT...CACTTGAAGAAGCTTGTGGCTCCCAAGCCACAAGTAGTCATTCTTAGCCTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| 3UTR-3UTR CCA 90 bp | TCTTCCATGCCACCACCCAGGCATAACCAGTTGGTTTGTTTCCTTCTGAGGAAGACAAAGAAATACAAGTaGCAGGCCCAAGTATTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SSMPPPRHNQLVCFLLRKTKKYK*QAQVFS Trigger: AGAAAATACTTGGGCCTGCCACTTGTATTTCTTTGT...CTTCCTCAGAAGGAAACAAACCAACTGGTTATGCCTGGGTGGTGGCATGGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| 3UTR-3UTR GCA 90 bp | GTAGAAAAGCTTTATTATACCCAGCGCAGCATTTCTGCTAAGTTGACCAGGATGCCCGCCTTGGCAAACTaGTGTAACATTATACCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: VEKLYYTQRSISAKLTRMPALAN*CNIIPE Trigger: TTCAGGTATAATGTTACAGCAGTTTGCCAAGGCGGG...CATCCTGGTCAACTTAGCAGAAATGCTGCGCTGGGTATAATAAAGCTTTTCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| 3UTR-3UTR CCA 90 bp | CCTGTTCAAGGACTGAGTGTCCTTTACAAATCCCCTCCAAATGGGAGATTCCAAAAAGAACAATCTCTGTaGCAAACTAAGTTGGCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: PVQGLSVLYKSPPNGRFQKEQSL*QTKLAK Trigger: CTTGGCCAACTTAGTTTGCCACAGAGATTGTTCTTT...TTGGAATCTCCCATTTGGAGGGGATTTGTAAAGGACACTCAGTCCTTGAACAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| 3UTR CAA 90 bp | TGGTGGATTACCTGGAAGAGCAATTTGTACATCATCCTGTTCTTTTaGGACAGAAGTTACAGGATGCAATTTAGGCATCCCGTAAGAATC | + |
|
Preference number: 2 (lower is better) Translates to: WWITWKSNLYIILFF*DRSYRMQFRHPVRI Trigger: GATTCTTACGGGATGCCTAAATTGCATCCTGTAACTTCTGTCCAAAAAGAACAGGATGATGTACAAATTGCTCTTCCAGGTAATCCACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| 3UTR CAA 90 bp | TGGACCTCATGTTTCATTTCTAATTTCAAAATACTTATTAGCAAATaGGGCAACAATGGGCATCTTCCATGCCACCACCCAGGCATAACC | + |
|
Preference number: 2 (lower is better) Translates to: WTSCFISNFKILISK*GNNGHLPCHHPGIT Trigger: GGTTATGCCTGGGTGGTGGCATGGAAGATGCCCATTGTTGCCCAATTTGCTAATAAGTATTTTGAAATTAGAAATGAAACATGAGGTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| 3UTR-3UTR TCA 90 bp | GGTAGGGAACTGGACAGGCTTGGACCTCATGTTTCATTTCTAATTTCAAAATACGCATTTCTGCTAAGTTaGCCAGGATGGTTACAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: GRELDRLGPHVSFLISKYAFLLS*PGWLQK Trigger: TTTCTGTAACCATCCTGGTCAACTTAGCAGAAATGC...GTATTTTGAAATTAGAAATGAAACATGAGGTCCAAGCCTGTCCAGTTCCCTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| 3UTR-3UTR CCA 90 bp | GTAGAAAAGCTTTATTATACCCAGCGCAGCATTTCTGCTAAGTTGACCAGGATGTCATCCTGTTCTTTTTaGACAGAAGTTACAGGATGC | + |
|
Preference number: 2 (lower is better) Translates to: VEKLYYTQRSISAKLTRMSSCSF*TEVTGC Trigger: GCATCCTGTAACTTCTGTCCAAAAAGAACAGGATGA...CATCCTGGTCAACTTAGCAGAAATGCTGCGCTGGGTATAATAAAGCTTTTCTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| 3UTR CAA 90 bp | GAAGTAGAAAAGCTTTATTATACCCAGCGCAGCATTTCTGCTAAGTaGACCAGGATGGTTACAGAAAAACATCCTGTAAGCATTTCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: EVEKLYYTQRSISAK*TRMVTEKHPVSISV Trigger: GACAGAAATGCTTACAGGATGTTTTTCTGTAACCATCCTGGTCAACTTAGCAGAAATGCTGCGCTGGGTATAATAAAGCTTTTCTACTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| 3UTR-3UTR GCA 90 bp | AATTTCAAAATACTTATTAGCAAATTGGGCAACAATGGGCATCTTCCATGCCACGTTACTTCTTTCCTCTaGACGACTCGTCTCCAATTG | + |
|
Preference number: 2 (lower is better) Translates to: NFKILISKLGNNGHLPCHVTSFL*TTRLQL Trigger: CAATTGGAGACGAGTCGTGCAGAGGAAAGAAGTAAC...GTGGCATGGAAGATGCCCATTGTTGCCCAATTTGCTAATAAGTATTTTGAAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| 3UTR-3UTR TCA 90 bp | AATTTCAAAATACTTATTAGCAAATTGGGCAACAATGGGCATCTTCCATGCCACTGGTTTGTTTCCTTCTaGGGAAGGTTTCAAATGTGT | + |
|
Preference number: 2 (lower is better) Translates to: NFKILISKLGNNGHLPCHWFVSF*GRFQMC Trigger: ACACATTTGAAACCTTCCTCAGAAGGAAACAAACCA...GTGGCATGGAAGATGCCCATTGTTGCCCAATTTGCTAATAAGTATTTTGAAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| 3UTR CCA 72 bp | GAGCCACAAGCTTCTTCAAGTGTCTCAGAACCTACCTaGTGTGAGGGCCAAGTCTGTACCCCTCATACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: EPQASSSVSEPT*CEGQVCTPHTQ Trigger: CTGGGTATGAGGGGTACAGACTTGGCCCTCACACCAGGTAGGTTCTGAGACACTTGAAGAAGCTTGTGGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| 3UTR TCA 72 bp | ACAAGCTTCTTCAAGTGTCTCAGAACCTACCTGGTGTaGGGGCCAAGTCTGTACCCCTCATACCCAGCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: TSFFKCLRTYLV*GPSLYPSYPAS Trigger: TGAGGCTGGGTATGAGGGGTACAGACTTGGCCCTCACACCAGGTAGGTTCTGAGACACTTGAAGAAGCTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| 3UTR-3UTR CAA 90 bp | CCAGTCAAGAGGCTCAATTGTCACCAGTTAGGTCCCCGCCTTGGCAAACTGCTGCTGTGGCAAACTAAGTaGGCCAAGAAGCTGAAGACT | + |
|
Preference number: 3 (lower is better) Translates to: PVKRLNCHQLGPRLGKLLLWQTK*AKKLKT Trigger: AGTCTTCAGCTTCTTGGCCAACTTAGTTTGCCACAG...CAGCAGTTTGCCAAGGCGGGGACCTAACTGGTGACAATTGAGCCTCTTGACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| 3UTR TCA 72 bp | AAGTCTGTACCCCTCATACCCAGCCTCAACTGGAGATaGCTAAGGCTAGTCTGTGCACTTGAGGCCACATTC | + |
|
Preference number: 3 (lower is better) Translates to: KSVPLIPSLNWR*LRLVCALEATF Trigger: GAATGTGGCCTCAAGTGCACAGACTAGCCTTAGTCATCTCCAGTTGAGGCTGGGTATGAGGGGTACAGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| 3UTR CCA 72 bp | CAAGAGGCTCAATTGTCACCAGTTAGGTCCCCGCCTTaGCAAACTGCTGTAACATTATACCTGAAGCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: QEAQLSPVRSPP*QTAVTLYLKQQ Trigger: CTGCTGCTTCAGGTATAATGTTACAGCAGTTTGCCAAGGCGGGGACCTAACTGGTGACAATTGAGCCTCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| 3UTR CCA 72 bp | CCTGGAAGAGCAATTTGTACATCATCCTGTTCTTTTTaGACAGAAGTTACAGGATGCAATTTAGGCATCCCG | + |
|
Preference number: 3 (lower is better) Translates to: PGRAICTSSCSF*TEVTGCNLGIP Trigger: CGGGATGCCTAAATTGCATCCTGTAACTTCTGTCCAAAAAGAACAGGATGATGTACAAATTGCTCTTCCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| 3UTR-3UTR CAA 90 bp | AATTTCAAAATACTTATTAGCAAATTGGGCAACAATGGGCATCTTCCATGCCACCCCAGGCATAACCAGTaGGTTTGTTTCCTTCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: NFKILISKLGNNGHLPCHPRHNQ*VCFLLR Trigger: CCTCAGAAGGAAACAAACCAACTGGTTATGCCTGGG...GTGGCATGGAAGATGCCCATTGTTGCCCAATTTGCTAATAAGTATTTTGAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| 3UTR-3UTR CAA 90 bp | AATTTCAAAATACTTATTAGCAAATTGGGCAACAATGGGCATCTTCCATGCCACCTGTGGCAAACTAAGTaGGCCAAGAAGCTGAAGACT | + |
|
Preference number: 3 (lower is better) Translates to: NFKILISKLGNNGHLPCHLWQTK*AKKLKT Trigger: AGTCTTCAGCTTCTTGGCCAACTTAGTTTGCCACAG...GTGGCATGGAAGATGCCCATTGTTGCCCAATTTGCTAATAAGTATTTTGAAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| 3UTR-3UTR CAA 90 bp | GGTAGGGAACTGGACAGGCTTGGACCTCATGTTTCATTTCTAATTTCAAAATACATCATCCTGTTCTTTTaGGACAGAAGTTACAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: GRELDRLGPHVSFLISKYIILFF*DRSYRM Trigger: CATCCTGTAACTTCTGTCCAAAAAGAACAGGATGAT...GTATTTTGAAATTAGAAATGAAACATGAGGTCCAAGCCTGTCCAGTTCCCTACC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| 3UTR CCA 72 bp | TCCATGCATATTTTCTCAATTCTCACAAGCATCACATaGAATAACTTGTCACCTAACTTTACAAAAGCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SMHIFSILTSIT*NNLSPNFTKAR Trigger: CCTTGCTTTTGTAAAGTTAGGTGACAAGTTATTCCATGTGATGCTTGTGAGAATTGAGAAAATATGCATGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR CCA 90 bp | CCAGTCAAGAGGCTCAATTGTCACCAGTTAGGTCCCCGCCTTGGCAAACTGCTGGGTTGGGTAGGGAACTaGACAGGCTTGGACCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: PVKRLNCHQLGPRLGKLLGWVGN*TGLDLM Trigger: CATGAGGTCCAAGCCTGTCCAGTTCCCTACCCAACC...CAGCAGTTTGCCAAGGCGGGGACCTAACTGGTGACAATTGAGCCTCTTGACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| CDS-3UTR TCA 90 bp | AGCAAGGCTAAGAATGACTACTTGTGGCTTGGGAGCCACAAGCTTCTTCAAGTGGGTGGGAAGATCACCTaGGCCTGGGGAGGTCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SKAKNDYLWLGSHKLLQVGGKIT*AWGGQG Trigger: GCCTTGACCTCCCCAGGCTCAGGTGATCTTCCCACC...CACTTGAAGAAGCTTGTGGCTCCCAAGCCACAAGTAGTCATTCTTAGCCTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR CCA 90 bp | AGCAGCTGGTGGGAGGGTTATAGGAGACTGAAAGTGCTTTTCCAGTTAACCGTGACTGCACTCCCAGCCTaGGTGAGAGCAAGACCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SSWWEGYRRLKVLFQLTVTALPA*VRARPR Trigger: ACGGGGTCTTGCTCTCACCCAGGCTGGGAGTGCAGT...CACGGTTAACTGGAAAAGCACTTTCAGTCTCCTATAACCCTCCCACCAGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR TCA 90 bp | GAGGGTTATAGGAGACTGAAAGTGCTTTTCCAGTTAACCGTGGTGGATTACCTGGGTGGGAAGATCACCTaGGCCTGGGGAGGTCAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EGYRRLKVLFQLTVVDYLGGKIT*AWGGQG Trigger: GCCTTGACCTCCCCAGGCTCAGGTGATCTTCCCACC...CAGGTAATCCACCACGGTTAACTGGAAAAGCACTTTCAGTCTCCTATAACCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR TCA 90 bp | AGCAAGGCTAAGAATGACTACTTGTGGCTTGGGAGCCACAAGCTTCTTCAAGTGAGAACCTACCTGGTGTaGGGGCCAAGTCTGTACCCC | + |
|
Preference number: 4 (lower is better) Translates to: SKAKNDYLWLGSHKLLQVRTYLV*GPSLYP Trigger: GGGGTACAGACTTGGCCCTCACACCAGGTAGGTTCT...CACTTGAAGAAGCTTGTGGCTCCCAAGCCACAAGTAGTCATTCTTAGCCTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR TCA 90 bp | CCAGTCAAGAGGCTCAATTGTCACCAGTTAGGTCCCCGCCTTGGCAAACTGCTGCGTGTCACTAAATTCTaGGTACCAGTCAAGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PVKRLNCHQLGPRLGKLLRVTKF*VPVKRL Trigger: GAGCCTCTTGACTGGTACTCAGAATTTAGTGACACG...CAGCAGTTTGCCAAGGCGGGGACCTAACTGGTGACAATTGAGCCTCTTGACTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR TCA 90 bp | ACTTGTGGCTTGGGAGCCACAAGCTTCTTCAAGTGTCTCAGAACCTACCTGGTGCCCCTGTTCAAGGACTaGGTGTCCTTTACAAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: TCGLGATSFFKCLRTYLVPLFKD*VSFTNP Trigger: GGGATTTGTAAAGGACACTCAGTCCTTGAACAGGGG...CACCAGGTAGGTTCTGAGACACTTGAAGAAGCTTGTGGCTCCCAAGCCACAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR TCA 90 bp | GTCTGTACCCCTCATACCCAGCCTCAACTGGAGATGACTAAGGCTAGTCTGTGCCGTGTCACTAAATTCTaGGTACCAGTCAAGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VCTPHTQPQLEMTKASLCRVTKF*VPVKRL Trigger: GAGCCTCTTGACTGGTACTCAGAATTTAGTGACACG...GCACAGACTAGCCTTAGTCATCTCCAGTTGAGGCTGGGTATGAGGGGTACAGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR GCA 90 bp | GAGGGTTATAGGAGACTGAAAGTGCTTTTCCAGTTAACCGTGGTGGATTACCTGCCAAGATCAAGCCACTaGACTCCAGCCGGGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: EGYRRLKVLFQLTVVDYLPRSSH*TPAGVT Trigger: TGTCACCCCGGCTGGAGTGCAGTGGCTTGATCTTGG...CAGGTAATCCACCACGGTTAACTGGAAAAGCACTTTCAGTCTCCTATAACCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| CDS-3UTR GCA 90 bp | CACAAGCTTCTTCAAGTGTCTCAGAACCTACCTGGTGTGAGGGCCAAGTCTGTAAATGGGCATCTTCCATaGCACCACCCAGGCATAACC | + |
|
Preference number: 4 (lower is better) Translates to: HKLLQVSQNLPGVRAKSVNGHLP*HHPGIT Trigger: GGTTATGCCTGGGTGGTGGCATGGAAGATGCCCATT...TACAGACTTGGCCCTCACACCAGGTAGGTTCTGAGACACTTGAAGAAGCTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| CDS-3UTR TCA 90 bp | GAGGGTTATAGGAGACTGAAAGTGCTTTTCCAGTTAACCGTGGTGGATTACCTGGCTAGTCTGTGCACTTaGGGCCACATTCCCCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: EGYRRLKVLFQLTVVDYLASLCT*GHIPLF Trigger: GAACAGGGGAATGTGGCCTCAAGTGCACAGACTAGC...CAGGTAATCCACCACGGTTAACTGGAAAAGCACTTTCAGTCTCCTATAACCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR TCA 90 bp | AATGACTACTTGTGGCTTGGGAGCCACAAGCTTCTTCAAGTGTCTCAGAACCTAGCTAGTCTGTGCACTTaGGGCCACATTCCCCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: NDYLWLGSHKLLQVSQNLASLCT*GHIPLF Trigger: GAACAGGGGAATGTGGCCTCAAGTGCACAGACTAGC...TAGGTTCTGAGACACTTGAAGAAGCTTGTGGCTCCCAAGCCACAAGTAGTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR GCA 90 bp | AGCAAGGCTAAGAATGACTACTTGTGGCTTGGGAGCCACAAGCTTCTTCAAGTGAGGCTGAAGCAGGATTaGTTGAGCTCAGGAGTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SKAKNDYLWLGSHKLLQVRLKQD*LSSGVR Trigger: CCGAACTCCTGAGCTCAAGCAATCCTGCTTCAGCCT...CACTTGAAGAAGCTTGTGGCTCCCAAGCCACAAGTAGTCATTCTTAGCCTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR CCA 90 bp | ACTTGTGGCTTGGGAGCCACAAGCTTCTTCAAGTGTCTCAGAACCTACCTGGTGGTTAGGTCCCCGCCTTaGCAAACTGCTGTAACATTA | + |
|
Preference number: 4 (lower is better) Translates to: TCGLGATSFFKCLRTYLVVRSPP*QTAVTL Trigger: TAATGTTACAGCAGTTTGCCAAGGCGGGGACCTAAC...CACCAGGTAGGTTCTGAGACACTTGAAGAAGCTTGTGGCTCCCAAGCCACAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR TCA 90 bp | ATTCCAAAGGGGCTTAAGCAAAAGAACAATCTCTGTGGCAAACTAAGTTGGCCAAGAACCTACCTGGTGTaGGGGCCAAGTCTGTACCCC | + |
|
Preference number: 4 (lower is better) Translates to: IPKGLKQKNNLCGKLSWPRTYLV*GPSLYP Trigger: GGGGTACAGACTTGGCCCTCACACCAGGTAGGTTCT...TGGCCAACTTAGTTTGCCACAGAGATTGTTCTTTTGCTTAAGCCCCTTTGGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR TCA 90 bp | TCAAGTGTCTCAGAACCTACCTGGTGTGAGGGCCAAGTCTGTACCCCTCATACCGCATTTCTGCTAAGTTaGCCAGGATGGTTACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSVSEPTWCEGQVCTPHTAFLLS*PGWLQK Trigger: TTTCTGTAACCATCCTGGTCAACTTAGCAGAAATGC...GGTATGAGGGGTACAGACTTGGCCCTCACACCAGGTAGGTTCTGAGACACTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR GCA 90 bp | CCTGTTCAAGGACTGAGTGTCCTTTACAAATCCCCTCCAAATGGGAGATTCCAAAGGCTGAAGCAGGATTaGTTGAGCTCAGGAGTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PVQGLSVLYKSPPNGRFQRLKQD*LSSGVR Trigger: CCGAACTCCTGAGCTCAAGCAATCCTGCTTCAGCCT...TTGGAATCTCCCATTTGGAGGGGATTTGTAAAGGACACTCAGTCCTTGAACAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| 3UTR CAA 72 bp | TGGGCATCTTCCATGCCACCACCCAGGCATAACCAGTaGGTTTGTTTCCTTCTGAGGAAGGTTTCAAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: WASSMPPPRHNQ*VCFLLRKVSNV Trigger: CACATTTGAAACCTTCCTCAGAAGGAAACAAACCAACTGGTTATGCCTGGGTGGTGGCATGGAAGATGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| CDS-3UTR TCA 90 bp | GTCTGTACCCCTCATACCCAGCCTCAACTGGAGATGACTAAGGCTAGTCTGTGCATCCCATATCCCTCATaGCCTATATACTACAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VCTPHTQPQLEMTKASLCIPYPS*PIYYRR Trigger: TCTTCTGTAGTATATAGGTCATGAGGGATATGGGAT...GCACAGACTAGCCTTAGTCATCTCCAGTTGAGGCTGGGTATGAGGGGTACAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR GCA 90 bp | AGCAGCTGGTGGGAGGGTTATAGGAGACTGAAAGTGCTTTTCCAGTTAACCGTGCCCGCCTTGGCAAACTaGTGTAACATTATACCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSWWEGYRRLKVLFQLTVPALAN*CNIIPE Trigger: TTCAGGTATAATGTTACAGCAGTTTGCCAAGGCGGG...CACGGTTAACTGGAAAAGCACTTTCAGTCTCCTATAACCCTCCCACCAGCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR CCA 90 bp | AGCAGCTGGTGGGAGGGTTATAGGAGACTGAAAGTGCTTTTCCAGTTAACCGTGGGAACTGGACAGGCTTaGACCTCATGTTTCATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSWWEGYRRLKVLFQLTVGTGQA*TSCFIS Trigger: AGAAATGAAACATGAGGTCCAAGCCTGTCCAGTTCC...CACGGTTAACTGGAAAAGCACTTTCAGTCTCCTATAACCCTCCCACCAGCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| CDS-3UTR CCA 90 bp | CCTGTTCAAGGACTGAGTGTCCTTTACAAATCCCCTCCAAATGGGAGATTCCAACAAATCCCCTCCAAATaGGAGATTCCAAAGGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PVQGLSVLYKSPPNGRFQQIPSK*EIPKGL Trigger: AAGCCCCTTTGGAATCTCCCATTTGGAGGGGATTTG...TTGGAATCTCCCATTTGGAGGGGATTTGTAAAGGACACTCAGTCCTTGAACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR CCA 90 bp | ATTCCAAAGGGGCTTAAGCAAAAGAACAATCTCTGTGGCAAACTAAGTTGGCCAGTCTCAGAACCTACCTaGTGTGAGGGCCAAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IPKGLKQKNNLCGKLSWPVSEPT*CEGQVC Trigger: ACAGACTTGGCCCTCACACCAGGTAGGTTCTGAGAC...TGGCCAACTTAGTTTGCCACAGAGATTGTTCTTTTGCTTAAGCCCCTTTGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR CCA 90 bp | CCTGTTCAAGGACTGAGTGTCCTTTACAAATCCCCTCCAAATGGGAGATTCCAACAAATTGGGCAACAATaGGCATCTTCCATGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: PVQGLSVLYKSPPNGRFQQIGQQ*ASSMPP Trigger: TGGTGGCATGGAAGATGCCCATTGTTGCCCAATTTG...TTGGAATCTCCCATTTGGAGGGGATTTGTAAAGGACACTCAGTCCTTGAACAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| CDS-3UTR TCA 90 bp | ATTCCAAAGGGGCTTAAGCAAAAGAACAATCTCTGTGGCAAACTAAGTTGGCCAAGCCTCAACTGGAGATaGCTAAGGCTAGTCTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: IPKGLKQKNNLCGKLSWPSLNWR*LRLVCA Trigger: TGCACAGACTAGCCTTAGTCATCTCCAGTTGAGGCT...TGGCCAACTTAGTTTGCCACAGAGATTGTTCTTTTGCTTAAGCCCCTTTGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR GCA 90 bp | CCTGTTCAAGGACTGAGTGTCCTTTACAAATCCCCTCCAAATGGGAGATTCCAAGTTACTTCTTTCCTCTaGACGACTCGTCTCCAATTG | + |
|
Preference number: 4 (lower is better) Translates to: PVQGLSVLYKSPPNGRFQVTSFL*TTRLQL Trigger: CAATTGGAGACGAGTCGTGCAGAGGAAAGAAGTAAC...TTGGAATCTCCCATTTGGAGGGGATTTGTAAAGGACACTCAGTCCTTGAACAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| CDS-3UTR CCA 90 bp | AGCAGCTGGTGGGAGGGTTATAGGAGACTGAAAGTGCTTTTCCAGTTAACCGTGTCATCCTGTTCTTTTTaGACAGAAGTTACAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SSWWEGYRRLKVLFQLTVSSCSF*TEVTGC Trigger: GCATCCTGTAACTTCTGTCCAAAAAGAACAGGATGA...CACGGTTAACTGGAAAAGCACTTTCAGTCTCCTATAACCCTCCCACCAGCTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR TCA 90 bp | GGTAGGGAACTGGACAGGCTTGGACCTCATGTTTCATTTCTAATTTCAAAATACGTTAATCGAATCGCCTaGACCCAGGAGGCAGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: GRELDRLGPHVSFLISKYVNRIA*TQEAEV Trigger: AACTTCTGCCTCCTGGGTTCAGGCGATTCGATTAAC...GTATTTTGAAATTAGAAATGAAACATGAGGTCCAAGCCTGTCCAGTTCCCTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| CDS-3UTR CCA 90 bp | ATGCCACCACCCAGGCATAACCAGTTGGTTTGTTTCCTTCTGAGGAAGGTTTCAAAAGAACAATCTCTGTaGCAAACTAAGTTGGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: MPPPRHNQLVCFLLRKVSKEQSL*QTKLAK Trigger: CTTGGCCAACTTAGTTTGCCACAGAGATTGTTCTTT...TGAAACCTTCCTCAGAAGGAAACAAACCAACTGGTTATGCCTGGGTGGTGGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| CDS-3UTR CCA 90 bp | GTAGAAAAGCTTTATTATACCCAGCGCAGCATTTCTGCTAAGTTGACCAGGATGGTAATCCCAGTACTTTaGGAGGCTGAAGCAGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: VEKLYYTQRSISAKLTRMVIPVL*EAEAGL Trigger: CAATCCTGCTTCAGCCTCCCAAAGTACTGGGATTAC...CATCCTGGTCAACTTAGCAGAAATGCTGCGCTGGGTATAATAAAGCTTTTCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR CCA 90 bp | CACAAGCTTCTTCAAGTGTCTCAGAACCTACCTGGTGTGAGGGCCAAGTCTGTATACTTATTAGCAAATTaGGCAACAATGGGCATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HKLLQVSQNLPGVRAKSVYLLAN*ATMGIF Trigger: GAAGATGCCCATTGTTGCCCAATTTGCTAATAAGTA...TACAGACTTGGCCCTCACACCAGGTAGGTTCTGAGACACTTGAAGAAGCTTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| 3UTR CAA 72 bp | TTTACAAAAGCAAGGCTAAGAATGACTACTTGTGGCTaGGGAGCCACAAGCTTCTTCAAGTGTCTCAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: FTKARLRMTTCG*GATSFFKCLRT Trigger: GGTTCTGAGACACTTGAAGAAGCTTGTGGCTCCCAAGCCACAAGTAGTCATTCTTAGCCTTGCTTTTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR GCA 90 bp | ATTCCAAAGGGGCTTAAGCAAAAGAACAATCTCTGTGGCAAACTAAGTTGGCCACCCGCCTTGGCAAACTaGTGTAACATTATACCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IPKGLKQKNNLCGKLSWPPALAN*CNIIPE Trigger: TTCAGGTATAATGTTACAGCAGTTTGCCAAGGCGGG...TGGCCAACTTAGTTTGCCACAGAGATTGTTCTTTTGCTTAAGCCCCTTTGGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR CCA 90 bp | AATGACTACTTGTGGCTTGGGAGCCACAAGCTTCTTCAAGTGTCTCAGAACCTACTCACAAGCATCACATaGAATAACTTGTCACCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: NDYLWLGSHKLLQVSQNLLTSIT*NNLSPN Trigger: GTTAGGTGACAAGTTATTCCATGTGATGCTTGTGAG...TAGGTTCTGAGACACTTGAAGAAGCTTGTGGCTCCCAAGCCACAAGTAGTCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR CCA 90 bp | AATGACTACTTGTGGCTTGGGAGCCACAAGCTTCTTCAAGTGTCTCAGAACCTATCATCCTGTTCTTTTTaGACAGAAGTTACAGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: NDYLWLGSHKLLQVSQNLSSCSF*TEVTGC Trigger: GCATCCTGTAACTTCTGTCCAAAAAGAACAGGATGA...TAGGTTCTGAGACACTTGAAGAAGCTTGTGGCTCCCAAGCCACAAGTAGTCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR TCA 90 bp | AATTTCAAAATACTTATTAGCAAATTGGGCAACAATGGGCATCTTCCATGCCACCCCCTGTTCAAGGACTaGGTGTCCTTTACAAATCCC | + |
|
Preference number: 4 (lower is better) Translates to: NFKILISKLGNNGHLPCHPLFKD*VSFTNP Trigger: GGGATTTGTAAAGGACACTCAGTCCTTGAACAGGGG...GTGGCATGGAAGATGCCCATTGTTGCCCAATTTGCTAATAAGTATTTTGAAATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| CDS-3UTR TCA 90 bp | GTAGAAAAGCTTTATTATACCCAGCGCAGCATTTCTGCTAAGTTGACCAGGATGGCATTTCTGCTAAGTTaGCCAGGATGGTTACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VEKLYYTQRSISAKLTRMAFLLS*PGWLQK Trigger: TTTCTGTAACCATCCTGGTCAACTTAGCAGAAATGC...CATCCTGGTCAACTTAGCAGAAATGCTGCGCTGGGTATAATAAAGCTTTTCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR CCA 90 bp | AATGACTACTTGTGGCTTGGGAGCCACAAGCTTCTTCAAGTGTCTCAGAACCTAACAAAGAAATACAAGTaGCAGGCCCAAGTATTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NDYLWLGSHKLLQVSQNLTKKYK*QAQVFS Trigger: AGAAAATACTTGGGCCTGCCACTTGTATTTCTTTGT...TAGGTTCTGAGACACTTGAAGAAGCTTGTGGCTCCCAAGCCACAAGTAGTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| 3UTR CAA 72 bp | AAGCTTTATTATACCCAGCGCAGCATTTCTGCTAAGTaGACCAGGATGGTTACAGAAAAACATCCTGTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KLYYTQRSISAK*TRMVTEKHPVS Trigger: GCTTACAGGATGTTTTTCTGTAACCATCCTGGTCAACTTAGCAGAAATGCTGCGCTGGGTATAATAAAGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR TCA 90 bp | GTAGAAAAGCTTTATTATACCCAGCGCAGCATTTCTGCTAAGTTGACCAGGATGATCCCATATCCCTCATaGCCTATATACTACAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VEKLYYTQRSISAKLTRMIPYPS*PIYYRR Trigger: TCTTCTGTAGTATATAGGTCATGAGGGATATGGGAT...CATCCTGGTCAACTTAGCAGAAATGCTGCGCTGGGTATAATAAAGCTTTTCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR TCA 90 bp | ATTCCAAAGGGGCTTAAGCAAAAGAACAATCTCTGTGGCAAACTAAGTTGGCCATGGTTTGTTTCCTTCTaGGGAAGGTTTCAAATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IPKGLKQKNNLCGKLSWPWFVSF*GRFQMC Trigger: ACACATTTGAAACCTTCCTCAGAAGGAAACAAACCA...TGGCCAACTTAGTTTGCCACAGAGATTGTTCTTTTGCTTAAGCCCCTTTGGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| CDS-3UTR CCA 90 bp | ATTCCAAAGGGGCTTAAGCAAAAGAACAATCTCTGTGGCAAACTAAGTTGGCCAAAAGAACAATCTCTGTaGCAAACTAAGTTGGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: IPKGLKQKNNLCGKLSWPKEQSL*QTKLAK Trigger: CTTGGCCAACTTAGTTTGCCACAGAGATTGTTCTTT...TGGCCAACTTAGTTTGCCACAGAGATTGTTCTTTTGCTTAAGCCCCTTTGGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR CCA 90 bp | ATTCCAAAGGGGCTTAAGCAAAAGAACAATCTCTGTGGCAAACTAAGTTGGCCACTCACAAGCATCACATaGAATAACTTGTCACCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: IPKGLKQKNNLCGKLSWPLTSIT*NNLSPN Trigger: GTTAGGTGACAAGTTATTCCATGTGATGCTTGTGAG...TGGCCAACTTAGTTTGCCACAGAGATTGTTCTTTTGCTTAAGCCCCTTTGGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR CCA 90 bp | AATTTCAAAATACTTATTAGCAAATTGGGCAACAATGGGCATCTTCCATGCCACGTTAGGTCCCCGCCTTaGCAAACTGCTGTAACATTA | + |
|
Preference number: 4 (lower is better) Translates to: NFKILISKLGNNGHLPCHVRSPP*QTAVTL Trigger: TAATGTTACAGCAGTTTGCCAAGGCGGGGACCTAAC...GTGGCATGGAAGATGCCCATTGTTGCCCAATTTGCTAATAAGTATTTTGAAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| CDS-3UTR CCA 90 bp | GGTAGGGAACTGGACAGGCTTGGACCTCATGTTTCATTTCTAATTTCAAAATACGATGAATCAGAAATTTaGAAGATGATACGGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRELDRLGPHVSFLISKYDESEI*KMIRVS Trigger: AGAAACCCGTATCATCTTCCAAATTTCTGATTCATC...GTATTTTGAAATTAGAAATGAAACATGAGGTCCAAGCCTGTCCAGTTCCCTACC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| CDS GCA 90 bp | GTCTTTCCTTGGCGGTCCCGCAGCAGCAGCCCTCGGGCCAGAGACTaGAGCGGAAGAAGCCGGCCATGGCATGAACGAATACACGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VFPWRSRSSSPRARD*SGRSRPWHERIHVG Trigger: GCCCACGTGTATTCGTTCATGCCATGGCCGGCTTCTTCCGCTGCAGTCTCTGGCCCGAGGGCTGCTGCTGCGGGACCGCCAAGGAAAGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396953.6 |
||
| CDS TCA 90 bp | CAGCCCTCGGGCCAGAGACTGCAGCGGAAGAAGCCGGCCATGGCATaGACGAATACACGTGGGCCGACATTGGTGAGCGCTGGGATCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QPSGQRLQRKKPAMA*TNTRGPTLVSAGIH Trigger: GTGGATCCCAGCGCTCACCAATGTCGGCCCACGTGTATTCGTTCATGCCATGGCCGGCTTCTTCCGCTGCAGTCTCTGGCCCGAGGGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396953.6 |
||
| CDS TCA 90 bp | CTAGCACCCTCCACCGCCAAGGAACAAACAAGCAGCCCGCAGCTCTaGATACAGGCGGAGGGCAGGAGGCTCTGGGACGCAAAGCCCTAT | + |
|
Preference number: 5 (lower is better) Translates to: LAPSTAKEQTSSPQL*IQAEGRRLWDAKPY Trigger: ATAGGGCTTTGCGTCCCAGAGCCTCCTGCCCTCCGCCTGTATTCAGAGCTGCGGGCTGCTTGTTTGTTCCTTGGCGGTGGAGGGTGCTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396953.6 |
||
| CDS CCA 90 bp | GAGACTGCAGCGGAAGAAGCCGGCCATGGCATGAACGAATACACGTaGGCCGACATTGGTGAGCGCTGGGATCCACAGATCCCAGCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ETAAEEAGHGMNEYT*ADIGERWDPQIPAE Trigger: TTCAGCTGGGATCTGTGGATCCCAGCGCTCACCAATGTCGGCCCACGTGTATTCGTTCATGCCATGGCCGGCTTCTTCCGCTGCAGTCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396953.6 |
||
| CDS CCA 90 bp | GCAGCACCCCTTCTGCTCTCTTCGCAGCCATCAACTGGCCCAGAGTaGGTACTCAATGAACCACGTATTCAAAACGACTCTGCCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AAPLLLSSQPSTGPE*VLNEPRIQNDSAFW Trigger: CCAGAAGGCAGAGTCGTTTTGAATACGTGGTTCATTGAGTACCCACTCTGGGCCAGTTGATGGCTGCGAAGAGAGCAGAAGGGGTGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396953.6 |
||
| CDS GCA 90 bp | GGGGCAGTTGCATCTTCATATTCCCAGAGATACTACCAGAATTTCTaGCTGCAGCTGGACCAGCCGACCTACAGCTCGTCTTTCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GAVASSYSQRYYQNF*LQLDQPTYSSSFLG Trigger: GCCAAGGAAAGACGAGCTGTAGGTCGGCTGGTCCAGCTGCAGGCAGAAATTCTGGTAGTATCTCTGGGAATATGAAGATGCAACTGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396953.6 |
||
| CDS-3UTR CAA 90 bp | CCTGTTCAAGGACTGAGTGTCCTTTACAAATCCCCTCCAAATGGGAGATTCCAAGGGAGGAGGAATGGGTaGGGTAGGGAACTGGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: PVQGLSVLYKSPPNGRFQGRRNG*GRELDR Trigger: CCTGTCCAGTTCCCTACCCAACCCATTCCTCCTCCC...TTGGAATCTCCCATTTGGAGGGGATTTGTAAAGGACACTCAGTCCTTGAACAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| CDS TCA 90 bp | TCTGCTCTCTTCGCAGCCATCAACTGGCCCAGAGTGGGTACTCAATaGACCACGTATTCAAAACGACTCTGCCTTCTGGCCCATGATATC | + |
|
Preference number: 5 (lower is better) Translates to: SALFAAINWPRVGTQ*TTYSKRLCLLAHDI Trigger: GATATCATGGGCCAGAAGGCAGAGTCGTTTTGAATACGTGGTTCATTGAGTACCCACTCTGGGCCAGTTGATGGCTGCGAAGAGAGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396953.6 |
||
| CDS CCA 90 bp | GAGTGGGTACTCAATGAACCACGTATTCAAAACGACTCTGCCTTCTaGCCCATGATATCCTCGAAGGCAAGGTGGGGGCAGTTGCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: EWVLNEPRIQNDSAF*PMISSKARWGQLHL Trigger: AAGATGCAACTGCCCCCACCTTGCCTTCGAGGATATCATGGGCCAGAAGGCAGAGTCGTTTTGAATACGTGGTTCATTGAGTACCCACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396953.6 |
||
| CDS-3UTR CAA 90 bp | ATGCCACCACCCAGGCATAACCAGTTGGTTTGTTTCCTTCTGAGGAAGGTTTCACTGAAGCAGGATTGCTaGAGCTCAGGAGTTCGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: MPPPRHNQLVCFLLRKVSLKQDC*SSGVRE Trigger: CTCCCGAACTCCTGAGCTCAAGCAATCCTGCTTCAG...TGAAACCTTCCTCAGAAGGAAACAAACCAACTGGTTATGCCTGGGTGGTGGCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| CDS-3UTR CAA 90 bp | CACAAGCTTCTTCAAGTGTCTCAGAACCTACCTGGTGTGAGGGCCAAGTCTGTAATGACTACTTGTGGCTaGGGAGCCACAAGCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HKLLQVSQNLPGVRAKSVMTTCG*GATSFF Trigger: GAAGAAGCTTGTGGCTCCCAAGCCACAAGTAGTCAT...TACAGACTTGGCCCTCACACCAGGTAGGTTCTGAGACACTTGAAGAAGCTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR CAA 90 bp | AGCAGCTGGTGGGAGGGTTATAGGAGACTGAAAGTGCTTTTCCAGTTAACCGTGGCTAAGAATGACTACTaGTGGCTTGGGAGCCACAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSWWEGYRRLKVLFQLTVAKNDY*WLGSHK Trigger: CTTGTGGCTCCCAAGCCACAAGTAGTCATTCTTAGC...CACGGTTAACTGGAAAAGCACTTTCAGTCTCCTATAACCCTCCCACCAGCTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR CAA 90 bp | AATGACTACTTGTGGCTTGGGAGCCACAAGCTTCTTCAAGTGTCTCAGAACCTACTGAAGCAGGATTGCTaGAGCTCAGGAGTTCGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: NDYLWLGSHKLLQVSQNLLKQDC*SSGVRE Trigger: CTCCCGAACTCCTGAGCTCAAGCAATCCTGCTTCAG...TAGGTTCTGAGACACTTGAAGAAGCTTGTGGCTCCCAAGCCACAAGTAGTCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR CAA 90 bp | TCTTCCATGCCACCACCCAGGCATAACCAGTTGGTTTGTTTCCTTCTGAGGAAGCCCAGGCATAACCAGTaGGTTTGTTTCCTTCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SSMPPPRHNQLVCFLLRKPRHNQ*VCFLLR Trigger: CCTCAGAAGGAAACAAACCAACTGGTTATGCCTGGG...CTTCCTCAGAAGGAAACAAACCAACTGGTTATGCCTGGGTGGTGGCATGGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| CDS-3UTR CAA 90 bp | CACAAGCTTCTTCAAGTGTCTCAGAACCTACCTGGTGTGAGGGCCAAGTCTGTAGGGAACTGGACAGGCTaGGACCTCATGTTTCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: HKLLQVSQNLPGVRAKSVGNWTG*DLMFHF Trigger: GAAATGAAACATGAGGTCCAAGCCTGTCCAGTTCCC...TACAGACTTGGCCCTCACACCAGGTAGGTTCTGAGACACTTGAAGAAGCTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| CDS CCA 90 bp | CAAAACGACTCTGCCTTCTGGCCCATGATATCCTCGAAGGCAAGGTaGGGGCAGTTGCATCTTCATATTCCCAGAGATACTACCAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: QNDSAFWPMISSKAR*GQLHLHIPRDTTRI Trigger: AATTCTGGTAGTATCTCTGGGAATATGAAGATGCAACTGCCCCCACCTTGCCTTCGAGGATATCATGGGCCAGAAGGCAGAGTCGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396953.6 |
||
| CDS-3UTR CAA 90 bp | TCAAGTGTCTCAGAACCTACCTGGTGTGAGGGCCAAGTCTGTACCCCTCATACCAGCATTTCTGCTAAGTaGACCAGGATGGTTACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSVSEPTWCEGQVCTPHTSISAK*TRMVTE Trigger: TTCTGTAACCATCCTGGTCAACTTAGCAGAAATGCT...GGTATGAGGGGTACAGACTTGGCCCTCACACCAGGTAGGTTCTGAGACACTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS TCA 90 bp | TACTCAATGAACCACGTATTCAAAACGACTCTGCCTTCTGGCCCATaGTATCCTCGAAGGCAAGGTGGGGGCAGTTGCATCTTCATATTC | + |
|
Preference number: 5 (lower is better) Translates to: YSMNHVFKTTLPSGP*YPRRQGGGSCIFIF Trigger: GAATATGAAGATGCAACTGCCCCCACCTTGCCTTCGAGGATATCATGGGCCAGAAGGCAGAGTCGTTTTGAATACGTGGTTCATTGAGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396953.6 |
||
| CDS-3UTR CAA 90 bp | AGCAAGGCTAAGAATGACTACTTGTGGCTTGGGAGCCACAAGCTTCTTCAAGTGCTGTGGCAAACTAAGTaGGCCAAGAAGCTGAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: SKAKNDYLWLGSHKLLQVLWQTK*AKKLKT Trigger: AGTCTTCAGCTTCTTGGCCAACTTAGTTTGCCACAG...CACTTGAAGAAGCTTGTGGCTCCCAAGCCACAAGTAGTCATTCTTAGCCTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR CAA 90 bp | GAGGGTTATAGGAGACTGAAAGTGCTTTTCCAGTTAACCGTGGTGGATTACCTGATGACTACTTGTGGCTaGGGAGCCACAAGCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EGYRRLKVLFQLTVVDYLMTTCG*GATSFF Trigger: GAAGAAGCTTGTGGCTCCCAAGCCACAAGTAGTCAT...CAGGTAATCCACCACGGTTAACTGGAAAAGCACTTTCAGTCTCCTATAACCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR CAA 90 bp | GTCTGTACCCCTCATACCCAGCCTCAACTGGAGATGACTAAGGCTAGTCTGTGCATCATCCTGTTCTTTTaGGACAGAAGTTACAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: VCTPHTQPQLEMTKASLCIILFF*DRSYRM Trigger: CATCCTGTAACTTCTGTCCAAAAAGAACAGGATGAT...GCACAGACTAGCCTTAGTCATCTCCAGTTGAGGCTGGGTATGAGGGGTACAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR CAA 90 bp | GAGGGTTATAGGAGACTGAAAGTGCTTTTCCAGTTAACCGTGGTGGATTACCTGCTGTGGCAAACTAAGTaGGCCAAGAAGCTGAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: EGYRRLKVLFQLTVVDYLLWQTK*AKKLKT Trigger: AGTCTTCAGCTTCTTGGCCAACTTAGTTTGCCACAG...CAGGTAATCCACCACGGTTAACTGGAAAAGCACTTTCAGTCTCCTATAACCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR CAA 90 bp | AGCAAGGCTAAGAATGACTACTTGTGGCTTGGGAGCCACAAGCTTCTTCAAGTGACGACTCGTCTCCAATaGTTAATCGAATCGCCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SKAKNDYLWLGSHKLLQVTTRLQ*LIESPE Trigger: TTCAGGCGATTCGATTAACAATTGGAGACGAGTCGT...CACTTGAAGAAGCTTGTGGCTCCCAAGCCACAAGTAGTCATTCTTAGCCTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| CDS-3UTR CAA 90 bp | AGCAGCTGGTGGGAGGGTTATAGGAGACTGAAAGTGCTTTTCCAGTTAACCGTGATCATCCTGTTCTTTTaGGACAGAAGTTACAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: SSWWEGYRRLKVLFQLTVIILFF*DRSYRM Trigger: CATCCTGTAACTTCTGTCCAAAAAGAACAGGATGAT...CACGGTTAACTGGAAAAGCACTTTCAGTCTCCTATAACCCTCCCACCAGCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS GCA 90 bp | CTCACCTGTAAAATGAAGATGACACTGCGCGCTGAATGCCTGCAGTaGCTGTCACAGGGTAAATGTTCAATAAAACCTTCTAATTCCCTA | + |
|
Preference number: 5 (lower is better) Translates to: LTCKMKMTLRAECLQ*LSQGKCSIKPSNSL Trigger: TAGGGAATTAGAAGGTTTTATTGAACATTTACCCTGTGACAGGCACTGCAGGCATTCAGCGCGCAGTGTCATCTTCATTTTACAGGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396953.6 |
||
| CDS GCA 90 bp | GATGCCTGTAAAATGAAGATGACACTGCGCGCTGAATGCCTGCAGTaGCTGTCACAGGGTAAATGTTCAATAAAACCTTCTAATTCCCTA | + |
|
Preference number: 5 (lower is better) Translates to: DACKMKMTLRAECLQ*LSQGKCSIKPSNSL Trigger: TAGGGAATTAGAAGGTTTTATTGAACATTTACCCTGTGACAGGCACTGCAGGCATTCAGCGCGCAGTGTCATCTTCATTTTACAGGCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000434963.1 |
||
| CDS-3UTR CAA 90 bp | CCTGTTCAAGGACTGAGTGTCCTTTACAAATCCCCTCCAAATGGGAGATTCCAAAGCATTTCTGCTAAGTaGACCAGGATGGTTACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PVQGLSVLYKSPPNGRFQSISAK*TRMVTE Trigger: TTCTGTAACCATCCTGGTCAACTTAGCAGAAATGCT...TTGGAATCTCCCATTTGGAGGGGATTTGTAAAGGACACTCAGTCCTTGAACAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000396957.5 ENST00000429711.7 |
||
| CDS-3UTR CAA 90 bp | AGCAGCTGGTGGGAGGGTTATAGGAGACTGAAAGTGCTTTTCCAGTTAACCGTGATACTTATTAGCAAATaGGGCAACAATGGGCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: SSWWEGYRRLKVLFQLTVILISK*GNNGHL Trigger: AAGATGCCCATTGTTGCCCAATTTGCTAATAAGTAT...CACGGTTAACTGGAAAAGCACTTTCAGTCTCCTATAACCCTCCCACCAGCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000429711.7 |
||
| CDS CCA 72 bp | CTGGTCGTCCCACGGCCCCCAGGAGACCCCGAAGTCTaGCCTCAACTAGCACCCTCCACCGCCAAGGAACAA | + |
|
Preference number: 6 (lower is better) Translates to: LVVPRPPGDPEV*PQLAPSTAKEQ Trigger: TTGTTCCTTGGCGGTGGAGGGTGCTAGTTGAGGCCAGACTTCGGGGTCTCCTGGGGGCCGTGGGACGACCAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396953.6 |
||
| CDS TCA 72 bp | TCCACCGCCAAGGAACAAACAAGCAGCCCGCAGCTCTaGATACAGGCGGAGGGCAGGAGGCTCTGGGACGCA | + |
|
Preference number: 6 (lower is better) Translates to: STAKEQTSSPQL*IQAEGRRLWDA Trigger: TGCGTCCCAGAGCCTCCTGCCCTCCGCCTGTATTCAGAGCTGCGGGCTGCTTGTTTGTTCCTTGGCGGTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396953.6 |
||
| CDS TCA 72 bp | GGCCAGAGACTGCAGCGGAAGAAGCCGGCCATGGCATaGACGAATACACGTGGGCCGACATTGGTGAGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: GQRLQRKKPAMA*TNTRGPTLVSA Trigger: AGCGCTCACCAATGTCGGCCCACGTGTATTCGTTCATGCCATGGCCGGCTTCTTCCGCTGCAGTCTCTGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396953.6 |
||
| CDS CCA 72 bp | GCGGAAGAAGCCGGCCATGGCATGAACGAATACACGTaGGCCGACATTGGTGAGCGCTGGGATCCACAGATC | + |
|
Preference number: 6 (lower is better) Translates to: AEEAGHGMNEYT*ADIGERWDPQI Trigger: GATCTGTGGATCCCAGCGCTCACCAATGTCGGCCCACGTGTATTCGTTCATGCCATGGCCGGCTTCTTCCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396953.6 |
||
| CDS GCA 72 bp | TTCCGAGCCATTGATTTCCTACAGCAGCACCCCTTCTaGTCTCTTCGCAGCCATCAACTGGCCCAGAGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: FRAIDFLQQHPF*SLRSHQLAQSG Trigger: CCCACTCTGGGCCAGTTGATGGCTGCGAAGAGAGCAGAAGGGGTGCTGCTGTAGGAAATCAATGGCTCGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396953.6 |
||
| CDS CCA 72 bp | ATGAACGAATACACGTGGGCCGACATTGGTGAGCGCTaGGATCCACAGATCCCAGCTGAAAGCTGTCAAGCT | + |
|
Preference number: 6 (lower is better) Translates to: MNEYTWADIGER*DPQIPAESCQA Trigger: AGCTTGACAGCTTTCAGCTGGGATCTGTGGATCCCAGCGCTCACCAATGTCGGCCCACGTGTATTCGTTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396953.6 |
||
| CDS TCA 72 bp | AACCACGTATTCAAAACGACTCTGCCTTCTGGCCCATaGTATCCTCGAAGGCAAGGTGGGGGCAGTTGCATC | + |
|
Preference number: 6 (lower is better) Translates to: NHVFKTTLPSGP*YPRRQGGGSCI Trigger: GATGCAACTGCCCCCACCTTGCCTTCGAGGATATCATGGGCCAGAAGGCAGAGTCGTTTTGAATACGTGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000396953.6 |
||
| CDS CAA 90 bp | TCTGCCTTCTGGCCCATGATATCCTCGAAGGCAAGGTGGGGGCAGTaGCATCTTCATATTCCCAGAGATACTACCAGAATTTCTGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SAFWPMISSKARWGQ*HLHIPRDTTRISAC Trigger: GCAGGCAGAAATTCTGGTAGTATCTCTGGGAATATGAAGATGCAACTGCCCCCACCTTGCCTTCGAGGATATCATGGGCCAGAAGGCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396953.6 |
||
| CDS GCA 72 bp | GCATCTTCATATTCCCAGAGATACTACCAGAATTTCTaGCTGCAGCTGGACCAGCCGACCTACAGCTCGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ASSYSQRYYQNF*LQLDQPTYSSS Trigger: AGACGAGCTGTAGGTCGGCTGGTCCAGCTGCAGGCAGAAATTCTGGTAGTATCTCTGGGAATATGAAGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000396953.6 |
||
| CDS CCA 72 bp | TCTGCCTTCTGGCCCATGATATCCTCGAAGGCAAGGTaGGGGCAGTTGCATCTTCATATTCCCAGAGATACT | + |
|
Preference number: 6 (lower is better) Translates to: SAFWPMISSKAR*GQLHLHIPRDT Trigger: AGTATCTCTGGGAATATGAAGATGCAACTGCCCCCACCTTGCCTTCGAGGATATCATGGGCCAGAAGGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396953.6 |
||
| CDS CCA 72 bp | CTTCTGCTCTCTTCGCAGCCATCAACTGGCCCAGAGTaGGTACTCAATGAACCACGTATTCAAAACGACTCT | + |
|
Preference number: 6 (lower is better) Translates to: LLLSSQPSTGPE*VLNEPRIQNDS Trigger: AGAGTCGTTTTGAATACGTGGTTCATTGAGTACCCACTCTGGGCCAGTTGATGGCTGCGAAGAGAGCAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000396953.6 |
||
| CDS CAA 72 bp | TGGCCCATGATATCCTCGAAGGCAAGGTGGGGGCAGTaGCATCTTCATATTCCCAGAGATACTACCAGAATT | + |
|
Preference number: 6 (lower is better) Translates to: WPMISSKARWGQ*HLHIPRDTTRI Trigger: AATTCTGGTAGTATCTCTGGGAATATGAAGATGCAACTGCCCCCACCTTGCCTTCGAGGATATCATGGGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000396953.6 |
||
| CDS CAA 72 bp | ATGGTCCTTCCGGTAGTACTGGCCTTGACCATCTACTaGAACCTGAGTCTTTTCCTCACCTGTAAAATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: MVLPVVLALTIY*NLSLFLTCKMK Trigger: CTTCATTTTACAGGTGAGGAAAAGACTCAGGTTCAAGTAGATGGTCAAGGCCAGTACTACCGGAAGGACCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000396953.6 |
||
| CDS CCA 72 bp | TATTGCAGTGTTCACAAAGCAGTCTTTTCCTGGTCTTaGGTCTCTACACTTAGAAGACCAAGTCACCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: YCSVHKAVFSWS*VSTLRRPSHLL Trigger: AAGGAGGTGACTTGGTCTTCTAAGTGTAGAGACCCAAGACCAGGAAAAGACTGCTTTGTGAACACTGCAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000452606.2 |
||