Pregenerated sensors for RPL30 (Homo sapiens)
Ensembl gene IDs: ENSG00000156482Ensembl transcript IDs: ENST00000517489.1, ENST00000517805.1, ENST00000518164.5, ENST00000518850.5, ENST00000520998.1, ENST00000521112.1, ENST00000521291.5, ENST00000521534.1, ENST00000521726.1, ENST00000522156.1
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | GATTACAAGTTTACACTCCTGTATATTCGTTCACGATaGATTCGCGGTAGGCGAAGCCCGTTCAGTCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: DYKFTLLYIRSR*IRGRRSPFSLF Trigger: GAAGAGACTGAACGGGCTTCGCCTACCGCGAATTCATCGTGAACGAATATACAGGAGTGTAAACTTGTAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518850.5 |
||
| CDS-3UTR TCA 90 bp | GATTTCCGTAATTATCCTGCAAGTGTTCGAGTTCATGGTACTCAGATTACAAGTTATATTCGTTCACGATaGATTCGCGGTAGGCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DFRNYPASVRVHGTQITSYIRSR*IRGRRS Trigger: GCTTCGCCTACCGCGAATTCATCGTGAACGAATATA...ACTTGTAATCTGAGTACCATGAACTCGAACACTTGCAGGATAATTACGGAAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518850.5 |
||
| CDS-3UTR CCA 90 bp | ATTATCCTGCAAGTGTTCGAGTTCATGGTACTCAGATTACAAGTTTACACTCCTAAGTGTTCGAGTTCATaGTACTCAGATTACAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: IILQVFEFMVLRLQVYTPKCSSS*YSDYKF Trigger: AAACTTGTAATCTGAGTACCATGAACTCGAACACTT...AGGAGTGTAAACTTGTAATCTGAGTACCATGAACTCGAACACTTGCAGGATAAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518850.5 |
||
| CDS TCA 90 bp | CCGTGGGCTCACATCTGCCCGCCCTGGCCAAGACATCTCTCCACGTaGATCGTCTTCCGGGCCTGGCCCGCCTCACTCACCGTCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PWAHICPPWPRHLST*IVFRAWPASLTVFF Trigger: AAAGAAGACGGTGAGTGAGGCGGGCCAGGCCCGGAAGACGATTCACGTGGAGAGATGTCTTGGCCAGGGCGGGCAGATGTGAGCCCACGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000517489.1 ENST00000521112.1 |
||
| CDS TCA 90 bp | GGAGCGGGACGGCCCCCAACCTTTAATCCCAGCACTTTCGGAGGTTaGGGCGGGAAGATCTGTTGCGTCCAGCTCAAGGCCAGCCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GAGRPPTFNPSTFGG*GGKICCVQLKASLD Trigger: GTCCAGGCTGGCCTTGAGCTGGACGCAACAGATCTTCCCGCCTCAACCTCCGAAAGTGCTGGGATTAAAGGTTGGGGGCCGTCCCGCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521726.1 |
||
| CDS TCA 90 bp | GATGAGAAGAGGCTGCGGCGGCTGCGACCACGGTCTCAATGCCGCTaGATTCATCTTTGTCCTGAGGCGCGGCTCTTGGAGAGCCTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: DEKRLRRLRPRSQCR*IHLCPEARLLESLV Trigger: CACAAGGCTCTCCAAGAGCCGCGCCTCAGGACAAAGATGAATTCAGCGGCATTGAGACCGTGGTCGCAGCCGCCGCAGCCTCTTCTCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521726.1 |
||
| CDS CCA 90 bp | GGTCTCAATGCCGCTGAATTCATCTTTGTCCTGAGGCGCGGCTCTTaGAGAGCCTTGTGGGTGACTCCGATGCGCCGCAGCACCCGCATT | + |
|
Preference number: 5 (lower is better) Translates to: GLNAAEFIFVLRRGS*RALWVTPMRRSTRI Trigger: AATGCGGGTGCTGCGGCGCATCGGAGTCACCCACAAGGCTCTCCAAGAGCCGCGCCTCAGGACAAAGATGAATTCAGCGGCATTGAGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521726.1 |
||
| CDS CCA 90 bp | GCTGAATTCATCTTTGTCCTGAGGCGCGGCTCTTGGAGAGCCTTGTaGGTGACTCCGATGCGCCGCAGCACCCGCATTTACTCTCCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: AEFIFVLRRGSWRAL*VTPMRRSTRIYSPL Trigger: AAGCGGAGAGTAAATGCGGGTGCTGCGGCGCATCGGAGTCACCCACAAGGCTCTCCAAGAGCCGCGCCTCAGGACAAAGATGAATTCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521726.1 |
||
| CDS CCA 90 bp | AGAGACAGAGAACAGGACAGGAATTTTAGGATCCGGAGTTACAAATaGCAACCCGCAAAGCTCCCCGCGCTGCCTAAACCTCGGTCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RDREQDRNFRIRSYK*QPAKLPALPKPRSV Trigger: TACCGACCGAGGTTTAGGCAGCGCGGGGAGCTTTGCGGGTTGCCATTTGTAACTCCGGATCCTAAAATTCCTGTCCTGTTCTCTGTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521291.5 |
||
| CDS TCA 90 bp | TGGTACTCAGATTACAAGTTTACACTCCTGTATATTCGTTCACGATaGATTCGCGGTAGGCGAAGCCCGTTCAGTCTCTTCGATTACCTC | + |
|
Preference number: 5 (lower is better) Translates to: WYSDYKFTLLYIRSR*IRGRRSPFSLFDYL Trigger: GAGGTAATCGAAGAGACTGAACGGGCTTCGCCTACCGCGAATTCATCGTGAACGAATATACAGGAGTGTAAACTTGTAATCTGAGTACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000518850.5 ENST00000520998.1 |
||
| CDS TCA 90 bp | CCCAGATCCAATGAAATCAGAACTTGCATTTTAACATCACCCATGTaGCTCCTTTGCACAGTCATGTTTCAGAAGCACTACTATAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: PRSNEIRTCILTSPM*LLCTVMFQKHYYRR Trigger: TCTTCTATAGTAGTGCTTCTGAAACATGACTGTGCAAAGGAGTCACATGGGTGATGTTAAAATGCAAGTTCTGATTTCATTGGATCTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000522156.1 |
||
| CDS TCA 90 bp | TTCATTATCCAATACAAACCAACATTTGTATGTATCCCTTGCAAGTaGAGGGGCAACCAGCAAATATCTAATCAACCCCTACTATGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: FIIQYKPTFVCIPCK*RGNQQISNQPLLCL Trigger: TAAACATAGTAGGGGTTGATTAGATATTTGCTGGTTGCCCCTTCACTTGCAAGGGATACATACAAATGTTGGTTTGTATTGGATAATGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000517805.1 ENST00000521534.1 |
||
| CDS GCA 72 bp | GGATTCCTTCTGGGGCCCTCCAAATGCCAGCAGGCATaGTGTCACCCCCGTGGGCTCACATCTGCCCGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: GFLLGPSKCQQA*CHPRGLTSARP Trigger: AGGGCGGGCAGATGTGAGCCCACGGGGGTGACAGCATGCCTGCTGGCATTTGGAGGGCCCCAGAAGGAATCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000517489.1 ENST00000521112.1 |
||
| CDS TCA 72 bp | AGGCTGCGGCGGCTGCGACCACGGTCTCAATGCCGCTaGATTCATCTTTGTCCTGAGGCGCGGCTCTTGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RLRRLRPRSQCR*IHLCPEARLLE Trigger: CTCCAAGAGCCGCGCCTCAGGACAAAGATGAATTCAGCGGCATTGAGACCGTGGTCGCAGCCGCCGCAGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521726.1 |
||
| CDS CCA 72 bp | GCCGCTGAATTCATCTTTGTCCTGAGGCGCGGCTCTTaGAGAGCCTTGTGGGTGACTCCGATGCGCCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: AAEFIFVLRRGS*RALWVTPMRRS Trigger: GCTGCGGCGCATCGGAGTCACCCACAAGGCTCTCCAAGAGCCGCGCCTCAGGACAAAGATGAATTCAGCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521726.1 |
||
| CDS CAA 90 bp | GCCGCTGAATTCATCTTTGTCCTGAGGCGCGGCTCTTGGAGAGCCTaGTGGGTGACTCCGATGCGCCGCAGCACCCGCATTTACTCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: AAEFIFVLRRGSWRA*WVTPMRRSTRIYSP Trigger: CGGAGAGTAAATGCGGGTGCTGCGGCGCATCGGAGTCACCCACAAGGCTCTCCAAGAGCCGCGCCTCAGGACAAAGATGAATTCAGCGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521726.1 |
||
| CDS CCA 72 bp | TCCTCACCCCTGCGGTCACCCAAGTTACCTGTCCCCTaGAGAACGGTGGCGCCCTGCTCGAGTTTCCCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: SSPLRSPKLPVP*RTVAPCSSFPK Trigger: TTTTGGGAAACTCGAGCAGGGCGCCACCGTTCTCCAGGGGACAGGTAACTTGGGTGACCGCAGGGGTGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521726.1 |
||
| CDS CCA 72 bp | ATCTTTGTCCTGAGGCGCGGCTCTTGGAGAGCCTTGTaGGTGACTCCGATGCGCCGCAGCACCCGCATTTAC | + |
|
Preference number: 6 (lower is better) Translates to: IFVLRRGSWRAL*VTPMRRSTRIY Trigger: GTAAATGCGGGTGCTGCGGCGCATCGGAGTCACCCACAAGGCTCTCCAAGAGCCGCGCCTCAGGACAAAGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521726.1 |
||
| CDS CAA 72 bp | TTCATCTTTGTCCTGAGGCGCGGCTCTTGGAGAGCCTaGTGGGTGACTCCGATGCGCCGCAGCACCCGCATT | + |
|
Preference number: 6 (lower is better) Translates to: FIFVLRRGSWRA*WVTPMRRSTRI Trigger: AATGCGGGTGCTGCGGCGCATCGGAGTCACCCACAAGGCTCTCCAAGAGCCGCGCCTCAGGACAAAGATGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000521726.1 |
||
| CDS TCA 72 bp | CGGCCCCCAACCTTTAATCCCAGCACTTTCGGAGGTTaGGGCGGGAAGATCTGTTGCGTCCAGCTCAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: RPPTFNPSTFGG*GGKICCVQLKA Trigger: GGCCTTGAGCTGGACGCAACAGATCTTCCCGCCTCAACCTCCGAAAGTGCTGGGATTAAAGGTTGGGGGCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000521726.1 |
||
| CDS GCA 72 bp | CCCCTCTGCGGGCCTTTAAGCTTCGCGGCGTTGTGTTaGTGTTCTGCTGCGAGCTGCGGTCTAACTAATCGA | + |
|
Preference number: 6 (lower is better) Translates to: PLCGPLSFAALC*CSAASCGLTNR Trigger: TCGATTAGTTAGACCGCAGCTCGCAGCAGAACAGCAACACAACGCCGCGAAGCTTAAAGGCCCGCAGAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000521726.1 |
||
| CDS CAA 72 bp | CTTTTCCCCCTCTGCGGGCCTTTAAGCTTCGCGGCGTaGTGTTGCTGTTCTGCTGCGAGCTGCGGTCTAACT | + |
|
Preference number: 6 (lower is better) Translates to: LFPLCGPLSFAA*CCCSAASCGLT Trigger: AGTTAGACCGCAGCTCGCAGCAGAACAGCAACACAACGCCGCGAAGCTTAAAGGCCCGCAGAGGGGGAAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000521726.1 |
||
| CDS CCA 72 bp | GAACAGGACAGGAATTTTAGGATCCGGAGTTACAAATaGCAACCCGCAAAGCTCCCCGCGCTGCCTAAACCT | + |
|
Preference number: 6 (lower is better) Translates to: EQDRNFRIRSYK*QPAKLPALPKP Trigger: AGGTTTAGGCAGCGCGGGGAGCTTTGCGGGTTGCCATTTGTAACTCCGGATCCTAAAATTCCTGTCCTGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000521291.5 |
||
| CDS CCA 72 bp | TTTCCTGGAGAAGCCTTCTGGATGCCATTCTATGTGTaGGGGTTGCAAGTGCTAGTTTTGTTCTGTAAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: FPGEAFWMPFYV*GLQVLVLFCKK Trigger: TTTCTTACAGAACAAAACTAGCACTTGCAACCCCCACACATAGAATGGCATCCAGAAGGCTTCTCCAGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518164.5 |
||
| CDS TCA 72 bp | CAATACAAACCAACATTTGTATGTATCCCTTGCAAGTaGAGGGGCAACCAGCAAATATCTAATCAACCCCTA | + |
|
Preference number: 6 (lower is better) Translates to: QYKPTFVCIPCK*RGNQQISNQPL Trigger: TAGGGGTTGATTAGATATTTGCTGGTTGCCCCTTCACTTGCAAGGGATACATACAAATGTTGGTTTGTATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000517805.1 ENST00000521534.1 |
||