Pregenerated sensors for RPL3 (Homo sapiens)
Ensembl gene IDs: ENSG00000100316Ensembl transcript IDs: ENST00000402527.5, ENST00000420536.1, ENST00000427905.5, ENST00000459859.1, ENST00000460589.5, ENST00000461967.1, ENST00000464182.5, ENST00000465618.5, ENST00000467105.1, ENST00000471290.1, ENST00000473638.5, ENST00000481985.5, ENST00000484358.1, ENST00000484615.5, ENST00000498462.1
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GAGCGGAGAACTTTCTGTGAGACCCCGGCGCCGGCCAAGACGGGATaGCGGCGATGCGTCGCGGATTCAGCCGTGCCGACGCCGGTGACA | + |
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Preference number: 5 (lower is better) Translates to: ERRTFCETPAPAKTG*RRCVADSAVPTPVT Trigger: TGTCACCGGCGTCGGCACGGCTGAATCCGCGACGCATCGCCGCCATCCCGTCTTGGCCGGCGCCGGGGTCTCACAGAAAGTTCTCCGCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427905.5 |
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| CDS GCA 90 bp | ACTTTCTGTGAGACCCCGGCGCCGGCCAAGACGGGATGGCGGCGATaGGTCGCGGATTCAGCCGTGCCGACGCCGGTGACAATGAAACGG | + |
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Preference number: 5 (lower is better) Translates to: TFCETPAPAKTGWRR*VADSAVPTPVTMKR Trigger: CCGTTTCATTGTCACCGGCGTCGGCACGGCTGAATCCGCGACGCATCGCCGCCATCCCGTCTTGGCCGGCGCCGGGGTCTCACAGAAAGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427905.5 |
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| CDS GCA 90 bp | AGCCTGCGGAACGGCCTCACGACCTCTGGTCATGCCGAGTCCAGCTaGTCAGCCTCCCGGAGCCCCACGCCTTCCAGACCTATGCATCAG | + |
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Preference number: 5 (lower is better) Translates to: SLRNGLTTSGHAESS*SASRSPTPSRPMHQ Trigger: CTGATGCATAGGTCTGGAAGGCGTGGGGCTCCGGGAGGCTGAGCAGCTGGACTCGGCATGACCAGAGGTCGTGAGGCCGTTCCGCAGGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465618.5 |
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| CDS TCA 90 bp | GGAGCCCCACGCCTTCCAGACCTATGCATCAGCGAGGGCTTTCGCTaGTCTCTGCCTAGGCTCCAGGGTGACTCGGATCCTGACCGATTC | + |
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Preference number: 5 (lower is better) Translates to: GAPRLPDLCISEGFR*SLPRLQGDSDPDRF Trigger: GAATCGGTCAGGATCCGAGTCACCCTGGAGCCTAGGCAGAGATCAGCGAAAGCCCTCGCTGATGCATAGGTCTGGAAGGCGTGGGGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465618.5 |
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| CDS CCA 90 bp | GAGGAGCCAGGCTTTCCTCAGCACTGTTCACAGCGCCCCTGCATCTaGGAAGCCACACGATCAATTCAGCCTCCCCCACCATCCGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: EEPGFPQHCSQRPCI*EATRSIQPPPPSGR Trigger: TCTGCCGGATGGTGGGGGAGGCTGAATTGATCGTGTGGCTTCCCAGATGCAGGGGCGCTGTGAACAGTGCTGAGGAAAGCCTGGCTCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000464182.5 ENST00000467105.1 |
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| CDS CCA 90 bp | TCATTGCCGGCTTCTAAGGAGCCTTTTCCACCAGCAAGCGGAGCCTaGATGGAGCTCATCGGGCAGAGCCGAGCGGAGCTGAGCAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: SLPASKEPFPPASGA*MELIGQSRAELSRG Trigger: ACCTCTGCTCAGCTCCGCTCGGCTCTGCCCGATGAGCTCCATCCAGGCTCCGCTTGCTGGTGGAAAAGGCTCCTTAGAAGCCGGCAATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484358.1 |
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| CDS CCA 90 bp | CCTCCCTCAAGCCCTATCTCTGCCATTTCTCCCATGCTAATGCAGTaGCCCGCGCTTGATTCTGAGGGTCAGGAGCGTCCCAAGCCTGCG | + |
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Preference number: 5 (lower is better) Translates to: PPSSPISAISPMLMQ*PALDSEGQERPKPA Trigger: CGCAGGCTTGGGACGCTCCTGACCCTCAGAATCAAGCGCGGGCCACTGCATTAGCATGGGAGAAATGGCAGAGATAGGGCTTGAGGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465618.5 |
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| CDS GCA 90 bp | CACGCCTTCCAGACCTATGCATCAGCGAGGGCTTTCGCTGATCTCTaGCTAGGCTCCAGGGTGACTCGGATCCTGACCGATTCCCTGCTT | + |
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Preference number: 5 (lower is better) Translates to: HAFQTYASARAFADL*LGSRVTRILTDSLL Trigger: AAGCAGGGAATCGGTCAGGATCCGAGTCACCCTGGAGCCTAGGCAGAGATCAGCGAAAGCCCTCGCTGATGCATAGGTCTGGAAGGCGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465618.5 |
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| CDS GCA 90 bp | GATTACGAGGAGCCAGGCTTTCCTCAGCACTGTTCACAGCGCCCCTaGATCTGGGAAGCCACACGATCAATTCAGCCTCCCCCACCATCC | + |
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Preference number: 5 (lower is better) Translates to: DYEEPGFPQHCSQRP*IWEATRSIQPPPPS Trigger: GGATGGTGGGGGAGGCTGAATTGATCGTGTGGCTTCCCAGATGCAGGGGCGCTGTGAACAGTGCTGAGGAAAGCCTGGCTCCTCGTAATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000464182.5 ENST00000467105.1 |
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| CDS TCA 90 bp | TGGGAAGCCACACGATCAATTCAGCCTCCCCCACCATCCGGCAGATaGGGACACACTCAAAGCAGCAAACAGCCCAGCAAGGCCAGACTG | + |
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Preference number: 5 (lower is better) Translates to: WEATRSIQPPPPSGR*GHTQSSKQPSKARL Trigger: CAGTCTGGCCTTGCTGGGCTGTTTGCTGCTTTGAGTGTGTCCTCATCTGCCGGATGGTGGGGGAGGCTGAATTGATCGTGTGGCTTCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000464182.5 ENST00000467105.1 |
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| CDS TCA 90 bp | AGGCAAACTAAACCCAAGACAGCAGCTCCCTGCCTGCTACAGAGCTaGGAAACCATGCACACGCTGCTCCCTGCTCTCCAGCTCCCAAGC | + |
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Preference number: 5 (lower is better) Translates to: RQTKPKTAAPCLLQS*ETMHTLLPALQLPS Trigger: GCTTGGGAGCTGGAGAGCAGGGAGCAGCGTGTGCATGGTTTCTCAGCTCTGTAGCAGGCAGGGAGCTGCTGTCTTGGGTTTAGTTTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484615.5 |
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| CDS TCA 90 bp | CAGACATGCCAGTGTGCTGACCTGCAAAGCACGCTAGAAGGCAGCTaGGGCCTCAGTCCCAGTCACAGCGTATCCCAAGGTCAGAGCAAA | + |
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Preference number: 5 (lower is better) Translates to: QTCQCADLQSTLEGS*GLSPSHSVSQGQSK Trigger: TTTGCTCTGACCTTGGGATACGCTGTGACTGGGACTGAGGCCTCAGCTGCCTTCTAGCGTGCTTTGCAGGTCAGCACACTGGCATGTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471290.1 |
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| CDS TCA 90 bp | AAGGCTGGGGCATTAGGGACAAATAACCCAGACATGCCAGTGTGCTaGCCTGCAAAGCACGCTAGAAGGCAGCTGAGGCCTCAGTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: KAGALGTNNPDMPVC*PAKHARRQLRPQSQ Trigger: CTGGGACTGAGGCCTCAGCTGCCTTCTAGCGTGCTTTGCAGGTCAGCACACTGGCATGTCTGGGTTATTTGTCCCTAATGCCCCAGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000471290.1 |
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| CDS CCA 90 bp | TGCCGGCTTCTAAGGAGCCTTTTCCACCAGCAAGCGGAGCCTGGATaGAGCTCATCGGGCAGAGCCGAGCGGAGCAATTCTTATAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: CRLLRSLFHQQAEPG*SSSGRAERSNSYRN Trigger: GTTTCTATAAGAATTGCTCCGCTCGGCTCTGCCCGATGAGCTCCATCCAGGCTCCGCTTGCTGGTGGAAAAGGCTCCTTAGAAGCCGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420536.1 ENST00000465618.5 |
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| CDS CCA 90 bp | CAGCTGAGCCTGAGACCCCACTTCTCACCAGCCAACCCCGACGAGTaGACTCAGATGACAACATGCCACTTACAAGGGACACAGCTAGGT | + |
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Preference number: 5 (lower is better) Translates to: QLSLRPHFSPANPDE*TQMTTCHLQGTQLG Trigger: ACCTAGCTGTGTCCCTTGTAAGTGGCATGTTGTCATCTGAGTCCACTCGTCGGGGTTGGCTGGTGAGAAGTGGGGTCTCAGGCTCAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467105.1 |
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| CDS CCA 90 bp | GCCTCAGTCCCAGTCACAGCGTATCCCAAGGTCAGAGCAAAAAGCTaGCTGGCCCTCCAGGTTCCTTTCTGTAAGGCGGCTGGGCTAAAA | + |
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Preference number: 5 (lower is better) Translates to: ASVPVTAYPKVRAKS*LALQVPFCKAAGLK Trigger: TTTTAGCCCAGCCGCCTTACAGAAAGGAACCTGGAGGGCCAGCCAGCTTTTTGCTCTGACCTTGGGATACGCTGTGACTGGGACTGAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471290.1 |
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| CDS CCA 90 bp | TTGGACTCCTCAACCAACTGGGTCCTCAGCCACCACCCACTAGCCTaGACTCAGAATGAGGGTGTTAGCTTCCGGCTGAAACCAGATGGC | + |
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Preference number: 5 (lower is better) Translates to: LDSSTNWVLSHHPLA*TQNEGVSFRLKPDG Trigger: GCCATCTGGTTTCAGCCGGAAGCTAACACCCTCATTCTGAGTCCAGGCTAGTGGGTGGTGGCTGAGGACCCAGTTGGTTGAGGAGTCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484615.5 |
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| CDS TCA 90 bp | TCAGTGGTCCCTGTGGGGAGAGAGGCAGTGGTCAGAGGTAGAAGATaGCAGGTGACAGCAGATGCCCACTCTAGAGGAGACCAAGACTCT | + |
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Preference number: 5 (lower is better) Translates to: SVVPVGREAVVRGRR*QVTADAHSRGDQDS Trigger: AGAGTCTTGGTCTCCTCTAGAGTGGGCATCTGCTGTCACCTGTCATCTTCTACCTCTGACCACTGCCTCTCTCCCCACAGGGACCACTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000473638.5 |
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| CDS TCA 90 bp | GGAATGGATACACATTACTTCACCTCAGCGCCCAGCACCTCCCACTaGCCCCTTCCTGCTACTCAGCAATTACCAACCATGGCTGGGTCA | + |
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Preference number: 5 (lower is better) Translates to: GMDTHYFTSAPSTSH*PLPATQQLPTMAGS Trigger: TGACCCAGCCATGGTTGGTAATTGCTGAGTAGCAGGAAGGGGTCAGTGGGAGGTGCTGGGCGCTGAGGTGAAGTAATGTGTATCCATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467105.1 |
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| CDS TCA 90 bp | CAAGCGGAGCCTGGATGGAGCTCATCGGGCAGAGCCGAGCGGAGCTaGGCAGAGGTCCACAAGGTTAATTTAAGTTACACGCATTCAAAC | + |
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Preference number: 5 (lower is better) Translates to: QAEPGWSSSGRAERS*AEVHKVNLSYTHSN Trigger: GTTTGAATGCGTGTAACTTAAATTAACCTTGTGGACCTCTGCTCAGCTCCGCTCGGCTCTGCCCGATGAGCTCCATCCAGGCTCCGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484358.1 |
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| CDS GCA 90 bp | CACTTCTCACCAGCCAACCCCGACGAGTGGACTCAGATGACAACATaGCACTTACAAGGGACACAGCTAGGTGTTGTGTTGGCTTCAGTT | + |
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Preference number: 5 (lower is better) Translates to: HFSPANPDEWTQMTT*HLQGTQLGVVLASV Trigger: AACTGAAGCCAACACAACACCTAGCTGTGTCCCTTGTAAGTGGCATGTTGTCATCTGAGTCCACTCGTCGGGGTTGGCTGGTGAGAAGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467105.1 |
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| CDS TCA 90 bp | TCCTCCTGTGATATGCAGCTATCTCTGGAATTAGCGAAGAAAGACTaGAACTCTCGTTTCCTGGCTCCCACGCTGGTTTTGCGGCGACAC | + |
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Preference number: 5 (lower is better) Translates to: SSCDMQLSLELAKKD*NSRFLAPTLVLRRH Trigger: GTGTCGCCGCAAAACCAGCGTGGGAGCCAGGAAACGAGAGTTTCAGTCTTTCTTCGCTAATTCCAGAGATAGCTGCATATCACAGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465618.5 |
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| CDS CCA 90 bp | TGGACTCAGAATGAGGGTGTTAGCTTCCGGCTGAAACCAGATGGCTaGCCAAGTCTGATCCCAGGTATTTTTCTGTTCGAGAGGCAAACT | + |
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Preference number: 5 (lower is better) Translates to: WTQNEGVSFRLKPDG*PSLIPGIFLFERQT Trigger: AGTTTGCCTCTCGAACAGAAAAATACCTGGGATCAGACTTGGCCAGCCATCTGGTTTCAGCCGGAAGCTAACACCCTCATTCTGAGTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484615.5 |
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| CDS CCA 90 bp | ACGCATTCAAACAAAATTCTTGCTCCGGGACAAACCTTTCTGCCCTaGGGAAGCCCACTCAGTGATGAAGGAAATGGGACATTCCACCCA | + |
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Preference number: 5 (lower is better) Translates to: THSNKILAPGQTFLP*GSPLSDEGNGTFHP Trigger: TGGGTGGAATGTCCCATTTCCTTCATCACTGAGTGGGCTTCCCCAGGGCAGAAAGGTTTGTCCCGGAGCAAGAATTTTGTTTGAATGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484615.5 |
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| CDS GCA 90 bp | GTTACACGCATTCAAACAAAATTCTTGCTCCGGGACAAACCTTTCTaGCCTGGGGAAGCCCACTCAGTGATGAAGGAAATGGGACATTCC | + |
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Preference number: 5 (lower is better) Translates to: VTRIQTKFLLRDKPF*PGEAHSVMKEMGHS Trigger: GGAATGTCCCATTTCCTTCATCACTGAGTGGGCTTCCCCAGGGCAGAAAGGTTTGTCCCGGAGCAAGAATTTTGTTTGAATGCGTGTAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484615.5 |
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| CDS CCA 90 bp | CTACGGCGTCCGGCAGCAGCCAAATTTGATAATAACGAAGAAAAATaGCTGCGTCGCTTCTCCTCCTGTGATATGCAGCTATCTCTGGAA | + |
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Preference number: 5 (lower is better) Translates to: LRRPAAAKFDNNEEK*LRRFSSCDMQLSLE Trigger: TTCCAGAGATAGCTGCATATCACAGGAGGAGAAGCGACGCAGCCATTTTTCTTCGTTATTATCAAATTTGGCTGCTGCCGGACGCCGTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000465618.5 |
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| CDS GCA 90 bp | CGAAGAAAGACTGAAACTCTCGTTTCCTGGCTCCCACGCTGGTTTTaGGGCGACACCAATTTACCTTTAATACCTTTAATCTCGGGCATC | + |
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Preference number: 5 (lower is better) Translates to: RRKTETLVSWLPRWF*GDTNLPLIPLISGI Trigger: GATGCCCGAGATTAAAGGTATTAAAGGTAAATTGGTGTCGCCGCAAAACCAGCGTGGGAGCCAGGAAACGAGAGTTTCAGTCTTTCTTCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465618.5 |
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| CDS GCA 72 bp | GAGACCCCGGCGCCGGCCAAGACGGGATGGCGGCGATaGGTCGCGGATTCAGCCGTGCCGACGCCGGTGACA | + |
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Preference number: 6 (lower is better) Translates to: ETPAPAKTGWRR*VADSAVPTPVT Trigger: TGTCACCGGCGTCGGCACGGCTGAATCCGCGACGCATCGCCGCCATCCCGTCTTGGCCGGCGCCGGGGTCTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427905.5 |
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| CDS GCA 72 bp | AAACCCCCGGCGCCGGCCAAGACGGGATGGCGGCGATaGGTCGCGGATTCAGCCGTGCCGACGCCGGTGACA | + |
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Preference number: 6 (lower is better) Translates to: KPPAPAKTGWRR*VADSAVPTPVT Trigger: TGTCACCGGCGTCGGCACGGCTGAATCCGCGACGCATCGCCGCCATCCCGTCTTGGCCGGCGCCGGGGGTTT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000402527.5 ENST00000459859.1 ENST00000460589.5 ENST00000498462.1 |
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| CDS CCA 72 bp | ACTTTCTGTGAGACCCCGGCGCCGGCCAAGACGGGATaGCGGCGATGCGTCGCGGATTCAGCCGTGCCGACG | + |
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Preference number: 6 (lower is better) Translates to: TFCETPAPAKTG*RRCVADSAVPT Trigger: CGTCGGCACGGCTGAATCCGCGACGCATCGCCGCCATCCCGTCTTGGCCGGCGCCGGGGTCTCACAGAAAGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427905.5 |
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| CDS CCA 72 bp | GAGCGTCCCAAGCCTGCGGAACGGCCTCACGACCTCTaGTCATGCCGAGTCCAGCTGCTCAGCCTCCCGGAG | + |
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Preference number: 6 (lower is better) Translates to: ERPKPAERPHDL*SCRVQLLSLPE Trigger: CTCCGGGAGGCTGAGCAGCTGGACTCGGCATGACCAGAGGTCGTGAGGCCGTTCCGCAGGCTTGGGACGCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465618.5 |
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| CDS GCA 72 bp | AACGGCCTCACGACCTCTGGTCATGCCGAGTCCAGCTaGTCAGCCTCCCGGAGCCCCACGCCTTCCAGACCT | + |
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Preference number: 6 (lower is better) Translates to: NGLTTSGHAESS*SASRSPTPSRP Trigger: AGGTCTGGAAGGCGTGGGGCTCCGGGAGGCTGAGCAGCTGGACTCGGCATGACCAGAGGTCGTGAGGCCGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465618.5 |
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| CDS CCA 72 bp | CTCCGAGGGGTGAGCGGAAGGCACACTGGCACCGCGTaGGGATGGAGCTCATTGCCGGCTTCTAAGGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: LRGVSGRHTGTA*GWSSLPASKEP Trigger: AGGCTCCTTAGAAGCCGGCAATGAGCTCCATCCCCACGCGGTGCCAGTGTGCCTTCCGCTCACCCCTCGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000420536.1 ENST00000465618.5 ENST00000484358.1 |
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| CDS TCA 72 bp | GATCAGCACAGGCCCAGGAGGGGATTGTCGTGCAGATaGCCCCTCCAGGTTCAGGCCCTCCCTGACCACAGG | + |
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Preference number: 6 (lower is better) Translates to: DQHRPRRGLSCR*PLQVQALPDHR Trigger: CCTGTGGTCAGGGAGGGCCTGAACCTGGAGGGGTCATCTGCACGACAATCCCCTCCTGGGCCTGTGCTGATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467105.1 |
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| CDS TCA 72 bp | GGCGCTGTGCCCAGCGCACATTCCAGGCCTCATCACTaGACAGCTGAGCCTGAGACCCCACTTCTCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: GAVPSAHSRPHH*TAEPETPLLTS Trigger: GCTGGTGAGAAGTGGGGTCTCAGGCTCAGCTGTTCAGTGATGAGGCCTGGAATGTGCGCTGGGCACAGCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467105.1 |
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| CDS CCA 72 bp | GCTTCTAAGGAGCCTTTTCCACCAGCAAGCGGAGCCTaGATGGAGCTCATCGGGCAGAGCCGAGCGGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: ASKEPFPPASGA*MELIGQSRAEL Trigger: CAGCTCCGCTCGGCTCTGCCCGATGAGCTCCATCCAGGCTCCGCTTGCTGGTGGAAAAGGCTCCTTAGAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484358.1 |
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| CDS GCA 72 bp | GAAGGCACACTGGCACCGCGTGGGGATGGAGCTCATTaGCGGCTTCTAAGGAGCCTTTTCCACCAGCAAGCG | + |
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Preference number: 6 (lower is better) Translates to: EGTLAPRGDGAH*RLLRSLFHQQA Trigger: CGCTTGCTGGTGGAAAAGGCTCCTTAGAAGCCGGCAATGAGCTCCATCCCCACGCGGTGCCAGTGTGCCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000420536.1 ENST00000465618.5 ENST00000484358.1 |
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| CDS CCA 72 bp | GCTTCTAAGGAGCCTTTTCCACCAGCAAGCGGAGCCTaGATGGAGCTCATCGGGCAGAGCCGAGCGGAGCAA | + |
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Preference number: 6 (lower is better) Translates to: ASKEPFPPASGA*MELIGQSRAEQ Trigger: TTGCTCCGCTCGGCTCTGCCCGATGAGCTCCATCCAGGCTCCGCTTGCTGGTGGAAAAGGCTCCTTAGAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420536.1 ENST00000465618.5 |
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| CDS CAA 72 bp | GGAAGGCACACTGGCACCGCGTGGGGATGGAGCTCATaGCCGGCTTCTAAGGAGCCTTTTCCACCAGCAAGC | + |
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Preference number: 6 (lower is better) Translates to: GRHTGTAWGWSS*PASKEPFPPAS Trigger: GCTTGCTGGTGGAAAAGGCTCCTTAGAAGCCGGCAATGAGCTCCATCCCCACGCGGTGCCAGTGTGCCTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000420536.1 ENST00000465618.5 ENST00000484358.1 |
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| CDS TCA 72 bp | CGCCTTCCAGACCTATGCATCAGCGAGGGCTTTCGCTaGTCTCTGCCTAGGCTCCAGGGTGACTCGGATCCT | + |
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Preference number: 6 (lower is better) Translates to: RLPDLCISEGFR*SLPRLQGDSDP Trigger: AGGATCCGAGTCACCCTGGAGCCTAGGCAGAGATCAGCGAAAGCCCTCGCTGATGCATAGGTCTGGAAGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465618.5 |
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| CDS GCA 72 bp | GAGCCAGGCTTTCCTCAGCACTGTTCACAGCGCCCCTaGATCTGGGAAGCCACACGATCAATTCAGCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: EPGFPQHCSQRP*IWEATRSIQPP Trigger: GGGAGGCTGAATTGATCGTGTGGCTTCCCAGATGCAGGGGCGCTGTGAACAGTGCTGAGGAAAGCCTGGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000464182.5 ENST00000467105.1 |
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| CDS CCA 72 bp | CTAAGGAGCCTTTTCCACCAGCAAGCGGAGCCTGGATaGAGCTCATCGGGCAGAGCCGAGCGGAGCAATTCT | + |
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Preference number: 6 (lower is better) Translates to: LRSLFHQQAEPG*SSSGRAERSNS Trigger: AGAATTGCTCCGCTCGGCTCTGCCCGATGAGCTCCATCCAGGCTCCGCTTGCTGGTGGAAAAGGCTCCTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420536.1 ENST00000465618.5 |
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| CDS CCA 72 bp | GGCTTTCCTCAGCACTGTTCACAGCGCCCCTGCATCTaGGAAGCCACACGATCAATTCAGCCTCCCCCACCA | + |
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Preference number: 6 (lower is better) Translates to: GFPQHCSQRPCI*EATRSIQPPPP Trigger: TGGTGGGGGAGGCTGAATTGATCGTGTGGCTTCCCAGATGCAGGGGCGCTGTGAACAGTGCTGAGGAAAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000464182.5 ENST00000467105.1 |
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| CDS TCA 72 bp | CAGTGTGCTGACCTGCAAAGCACGCTAGAAGGCAGCTaGGGCCTCAGTCCCAGTCACAGCGTATCCCAAGGT | + |
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Preference number: 6 (lower is better) Translates to: QCADLQSTLEGS*GLSPSHSVSQG Trigger: ACCTTGGGATACGCTGTGACTGGGACTGAGGCCTCAGCTGCCTTCTAGCGTGCTTTGCAGGTCAGCACACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471290.1 |
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| CDS GCA 72 bp | CAGACCTATGCATCAGCGAGGGCTTTCGCTGATCTCTaGCTAGGCTCCAGGGTGACTCGGATCCTGACCGAT | + |
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Preference number: 6 (lower is better) Translates to: QTYASARAFADL*LGSRVTRILTD Trigger: ATCGGTCAGGATCCGAGTCACCCTGGAGCCTAGGCAGAGATCAGCGAAAGCCCTCGCTGATGCATAGGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465618.5 |
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| CDS CCA 72 bp | AGCCCTATCTCTGCCATTTCTCCCATGCTAATGCAGTaGCCCGCGCTTGATTCTGAGGGTCAGGAGCGTCCC | + |
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Preference number: 6 (lower is better) Translates to: SPISAISPMLMQ*PALDSEGQERP Trigger: GGGACGCTCCTGACCCTCAGAATCAAGCGCGGGCCACTGCATTAGCATGGGAGAAATGGCAGAGATAGGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465618.5 |
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| CDS CCA 72 bp | TCACAGCGTATCCCAAGGTCAGAGCAAAAAGCTGGCTaGCCCTCCAGGTTCCTTTCTGTAAGGCGGCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: SQRIPRSEQKAG*PSRFLSVRRLG Trigger: GCCCAGCCGCCTTACAGAAAGGAACCTGGAGGGCCAGCCAGCTTTTTGCTCTGACCTTGGGATACGCTGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471290.1 |
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| CDS CCA 72 bp | CCAGTCACAGCGTATCCCAAGGTCAGAGCAAAAAGCTaGCTGGCCCTCCAGGTTCCTTTCTGTAAGGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: PVTAYPKVRAKS*LALQVPFCKAA Trigger: AGCCGCCTTACAGAAAGGAACCTGGAGGGCCAGCCAGCTTTTTGCTCTGACCTTGGGATACGCTGTGACTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000471290.1 |
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| CDS TCA 72 bp | ACACGATCAATTCAGCCTCCCCCACCATCCGGCAGATaGGGACACACTCAAAGCAGCAAACAGCCCAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: TRSIQPPPPSGR*GHTQSSKQPSK Trigger: CTTGCTGGGCTGTTTGCTGCTTTGAGTGTGTCCTCATCTGCCGGATGGTGGGGGAGGCTGAATTGATCGTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000464182.5 ENST00000467105.1 |
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| CDS GCA 72 bp | TTTAATCTCGGGCATCCCTCCCTCAAGCCCTATCTCTaGCATTTCTCCCATGCTAATGCAGTGGCCCGCGCT | + |
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Preference number: 6 (lower is better) Translates to: FNLGHPSLKPYL*HFSHANAVARA Trigger: AGCGCGGGCCACTGCATTAGCATGGGAGAAATGGCAGAGATAGGGCTTGAGGGAGGGATGCCCGAGATTAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465618.5 |
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| CDS CCA 72 bp | GGAAGCAGCCTATCCCCAAAAGCACGAGGCCTGGGATaGCCTCACAGAGCAGAACACCCATTACTTACCAGA | + |
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Preference number: 6 (lower is better) Translates to: GSSLSPKARGLG*PHRAEHPLLTR Trigger: TCTGGTAAGTAATGGGTGTTCTGCTCTGTGAGGCCATCCCAGGCCTCGTGCTTTTGGGGATAGGCTGCTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000467105.1 ENST00000481985.5 |
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| CDS CCA 72 bp | CTGAGACCCCACTTCTCACCAGCCAACCCCGACGAGTaGACTCAGATGACAACATGCCACTTACAAGGGACA | + |
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Preference number: 6 (lower is better) Translates to: LRPHFSPANPDE*TQMTTCHLQGT Trigger: TGTCCCTTGTAAGTGGCATGTTGTCATCTGAGTCCACTCGTCGGGGTTGGCTGGTGAGAAGTGGGGTCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467105.1 |
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| CDS CCA 72 bp | TCAACCAACTGGGTCCTCAGCCACCACCCACTAGCCTaGACTCAGAATGAGGGTGTTAGCTTCCGGCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: STNWVLSHHPLA*TQNEGVSFRLK Trigger: TTTCAGCCGGAAGCTAACACCCTCATTCTGAGTCCAGGCTAGTGGGTGGTGGCTGAGGACCCAGTTGGTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484615.5 |
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| CDS TCA 72 bp | GCATTAGGGACAAATAACCCAGACATGCCAGTGTGCTaGCCTGCAAAGCACGCTAGAAGGCAGCTGAGGCCT | + |
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Preference number: 6 (lower is better) Translates to: ALGTNNPDMPVC*PAKHARRQLRP Trigger: AGGCCTCAGCTGCCTTCTAGCGTGCTTTGCAGGTCAGCACACTGGCATGTCTGGGTTATTTGTCCCTAATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000471290.1 |
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| CDS GCA 72 bp | CCAGCCAACCCCGACGAGTGGACTCAGATGACAACATaGCACTTACAAGGGACACAGCTAGGTGTTGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: PANPDEWTQMTT*HLQGTQLGVVL Trigger: CAACACAACACCTAGCTGTGTCCCTTGTAAGTGGCATGTTGTCATCTGAGTCCACTCGTCGGGGTTGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000467105.1 ENST00000481985.5 |
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| CDS CCA 72 bp | CTCTCCAGCTCCCAAGCTCCCAAGCTAGGGACTGCATaGCCTCCTCCCTTACCAATTCTTATAGAAACGCCT | + |
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Preference number: 6 (lower is better) Translates to: LSSSQAPKLGTA*PPPLPILIETP Trigger: AGGCGTTTCTATAAGAATTGGTAAGGGAGGAGGCCATGCAGTCCCTAGCTTGGGAGCTTGGGAGCTGGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000460589.5 ENST00000484615.5 |
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| CDS CAA 90 bp | GCCATTTCCACGCACGCTCTTCCGCTCCTAGCTTTCGTTCAGAAGTaGACGTCAGCTTCGGAGACAGAAATTACACACTCTACGGCGAGG | + |
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Preference number: 6 (lower is better) Translates to: AISTHALPLLAFVQK*TSASETEITHSTAR Trigger: CCTCGCCGTAGAGTGTGTAATTTCTGTCTCCGAAGCTGACGTCAACTTCTGAACGAAAGCTAGGAGCGGAAGAGCGTGCGTGGAAATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465618.5 |
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| CDS GCA 72 bp | AGGAAATGGGACATTCCACCCAGGGCCAGAGGCCCTTaGCACCCCTATAGGGGTTTAATTATTCTGCTACCT | + |
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Preference number: 6 (lower is better) Translates to: RKWDIPPRARGP*HPYRGLIILLP Trigger: AGGTAGCAGAATAATTAAACCCCTATAGGGGTGGCAAGGGCCTCTGGCCCTGGGTGGAATGTCCCATTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484615.5 |
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| CDS CAA 90 bp | AGGGTGGGTGAGCCACAAATCTACGGCGTCCGGCAGCAGCCAAATTaGATAATAACGAAGAAAAATGGCTGCGTCGCTTCTCCTCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: RVGEPQIYGVRQQPN*IITKKNGCVASPPV Trigger: CACAGGAGGAGAAGCGACGCAGCCATTTTTCTTCGTTATTATCAAATTTGGCTGCTGCCGGACGCCGTAGATTTGTGGCTCACCCACCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000465618.5 |
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| CDS CCA 72 bp | AATGAGGGTGTTAGCTTCCGGCTGAAACCAGATGGCTaGCCAAGTCTGATCCCAGGTATTTTTCTGTTCGAG | + |
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Preference number: 6 (lower is better) Translates to: NEGVSFRLKPDG*PSLIPGIFLFE Trigger: CTCGAACAGAAAAATACCTGGGATCAGACTTGGCCAGCCATCTGGTTTCAGCCGGAAGCTAACACCCTCATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000484615.5 |
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| CDS CCA 72 bp | GGTTTAATTATTCTGCTACCTCTCCTGGTTTCTAGTTaGACTCCTCAACCAACTGGGTCCTCAGCCACCACC | + |
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Preference number: 6 (lower is better) Translates to: GLIILLPLLVSS*TPQPTGSSATT Trigger: GGTGGTGGCTGAGGACCCAGTTGGTTGAGGAGTCCAACTAGAAACCAGGAGAGGTAGCAGAATAATTAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000484615.5 |
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| CDS CAA 72 bp | ACGCACGCTCTTCCGCTCCTAGCTTTCGTTCAGAAGTaGACGTCAGCTTCGGAGACAGAAATTACACACTCT | + |
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Preference number: 6 (lower is better) Translates to: THALPLLAFVQK*TSASETEITHS Trigger: AGAGTGTGTAATTTCTGTCTCCGAAGCTGACGTCAACTTCTGAACGAAAGCTAGGAGCGGAAGAGCGTGCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000465618.5 |
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| CDS GCA 72 bp | ATTCAAACAAAATTCTTGCTCCGGGACAAACCTTTCTaGCCTGGGGAAGCCCACTCAGTGATGAAGGAAATG | + |
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Preference number: 6 (lower is better) Translates to: IQTKFLLRDKPF*PGEAHSVMKEM Trigger: CATTTCCTTCATCACTGAGTGGGCTTCCCCAGGGCAGAAAGGTTTGTCCCGGAGCAAGAATTTTGTTTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484615.5 |
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| CDS CCA 72 bp | AGAAAGACTGAAACTCTCGTTTCCTGGCTCCCACGCTaGTTTTGCGGCGACACCAATTTACCTTTAATACCT | + |
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Preference number: 6 (lower is better) Translates to: RKTETLVSWLPR*FCGDTNLPLIP Trigger: AGGTATTAAAGGTAAATTGGTGTCGCCGCAAAACCAGCGTGGGAGCCAGGAAACGAGAGTTTCAGTCTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465618.5 |
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| CDS CCA 72 bp | CCGGCAGCAGCCAAATTTGATAATAACGAAGAAAAATaGCTGCGTCGCTTCTCCTCCTGTGATATGCAGCTA | + |
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Preference number: 6 (lower is better) Translates to: PAAAKFDNNEEK*LRRFSSCDMQL Trigger: TAGCTGCATATCACAGGAGGAGAAGCGACGCAGCCATTTTTCTTCGTTATTATCAAATTTGGCTGCTGCCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000465618.5 |
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| CDS GCA 72 bp | ACTGAAACTCTCGTTTCCTGGCTCCCACGCTGGTTTTaGGGCGACACCAATTTACCTTTAATACCTTTAATC | + |
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Preference number: 6 (lower is better) Translates to: TETLVSWLPRWF*GDTNLPLIPLI Trigger: GATTAAAGGTATTAAAGGTAAATTGGTGTCGCCGCAAAACCAGCGTGGGAGCCAGGAAACGAGAGTTTCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000465618.5 |
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| CDS GCA 72 bp | CAGCAGCCAAATTTGATAATAACGAAGAAAAATGGCTaGGTCGCTTCTCCTCCTGTGATATGCAGCTATCTC | + |
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Preference number: 6 (lower is better) Translates to: QQPNLIITKKNG*VASPPVICSYL Trigger: GAGATAGCTGCATATCACAGGAGGAGAAGCGACGCAGCCATTTTTCTTCGTTATTATCAAATTTGGCTGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000465618.5 |
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| CDS TCA 72 bp | CTCTTTGCTAAGGTTCCTGGCAAATTTACTATGCTCTaGAATCAATACCCCACACCGCACCTAAAGCAAACA | + |
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Preference number: 6 (lower is better) Translates to: LFAKVPGKFTML*NQYPTPHLKQT Trigger: TGTTTGCTTTAGGTGCGGTGTGGGGTATTGATTTCAGAGCATAGTAAATTTGCCAGGAACCTTAGCAAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000461967.1 ENST00000498462.1 |
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