Pregenerated sensors for RPL29 (Homo sapiens)
Ensembl gene IDs: ENSG00000162244Ensembl transcript IDs: ENST00000294189.11, ENST00000480306.5, ENST00000481629.1, ENST00000486565.1, ENST00000648640.1
Found 65 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCTGCACGCACTCAGACAAGGCCACTCCTTACCCTAAGTGCCACTaGCAAGCAAGGGAGATAGCCAAACTGCCCTCAGGAGGCAGGTTA | + |
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Preference number: 1 (lower is better) Translates to: PCTHSDKATPYPKCH*QAREIAKLPSGGRL Trigger: TAACCTGCCTCCTGAGGGCAGTTTGGCTATCTCCCTTGCTTGGCAGTGGCACTTAGGGTAAGGAGTGGCCTTGTCTGAGTGCGTGCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| 3UTR GCA 90 bp | AATGTGCCCTGCACGCACTCAGACAAGGCCACTCCTTACCCTAAGTaGCACTGCCAAGCAAGGGAGATAGCCAAACTGCCCTCAGGAGGC | + |
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Preference number: 1 (lower is better) Translates to: NVPCTHSDKATPYPK*HCQAREIAKLPSGG Trigger: GCCTCCTGAGGGCAGTTTGGCTATCTCCCTTGCTTGGCAGTGGCACTTAGGGTAAGGAGTGGCCTTGTCTGAGTGCGTGCAGGGCACATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| 3UTR TCA 90 bp | AGCAAGGGAGATAGCCAAACTGCCCTCAGGAGGCAGGTTACACCCTaGCCAGAGGGTTACACTTCAGGCTGTGGAGACCAAGGAAAGCTT | + |
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Preference number: 1 (lower is better) Translates to: SKGDSQTALRRQVTP*PEGYTSGCGDQGKL Trigger: AAGCTTTCCTTGGTCTCCACAGCCTGAAGTGTAACCCTCTGGTCAGGGTGTAACCTGCCTCCTGAGGGCAGTTTGGCTATCTCCCTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| 3UTR TCA 90 bp | AGTCTGGTCCAAAAGACTTATAGCCAAGGTGGGATATGGGGAAACTaGGGCTCAGAGTTTGTGATTCACTCCACGGAACAGAGAGCAAAA | + |
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Preference number: 1 (lower is better) Translates to: SLVQKTYSQGGIWGN*GSEFVIHSTEQRAK Trigger: TTTTGCTCTCTGTTCCGTGGAGTGAATCACAAACTCTGAGCCTCAGTTTCCCCATATCCCACCTTGGCTATAAGTCTTTTGGACCAGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| 3UTR-3UTR TCA 90 bp | CTGGTCAGTGTGGGAATGTGCCCTGCACGCACTCAGACAAGGCCACTCCTTACCAGGCAGGTTACACCCTaGCCAGAGGGTTACACTTCA | + |
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Preference number: 2 (lower is better) Translates to: LVSVGMCPARTQTRPLLTRQVTP*PEGYTS Trigger: TGAAGTGTAACCCTCTGGTCAGGGTGTAACCTGCCT...GGTAAGGAGTGGCCTTGTCTGAGTGCGTGCAGGGCACATTCCCACACTGACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| 3UTR-3UTR CCA 90 bp | CCTGCACGCACTCAGACAAGGCCACTCCTTACCCTAAGTGCCACTGCCAAGCAAAGGAATTGCAGGCTTTaGGTGGGCCAGTTAGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: PARTQTRPLLTLSATAKQRNCRL*VGQLGC Trigger: ACAGCCTAACTGGCCCACCCAAAGCCTGCAATTCCT...TTGCTTGGCAGTGGCACTTAGGGTAAGGAGTGGCCTTGTCTGAGTGCGTGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| 3UTR-3UTR GCA 90 bp | AAAATTACAAGCTGCTTTGCTGCCCTGTCTGCCAAGGTTGTGGGGCTTCAACTTTACCCTAAGTGCCACTaGCAAGCAAGGGAGATAGCC | + |
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Preference number: 2 (lower is better) Translates to: KITSCFAALSAKVVGLQLYPKCH*QAREIA Trigger: GGCTATCTCCCTTGCTTGGCAGTGGCACTTAGGGTA...AAGTTGAAGCCCCACAACCTTGGCAGACAGGGCAGCAAAGCAGCTTGTAATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| 3UTR-3UTR GCA 90 bp | TCAGGGACACCCCCTCCCCTCTTTAGAAGAAGGTGTCAATTAAATACCAAGTCTGTCAGTGTGGGAATGTaGCCTGCACGCACTCAGACA | + |
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Preference number: 2 (lower is better) Translates to: SGTPPPLFRRRCQLNTKSVSVGM*PARTQT Trigger: TGTCTGAGTGCGTGCAGGGCACATTCCCACACTGAC...AGACTTGGTATTTAATTGACACCTTCTTCTAAAGAGGGGAGGGGGTGTCCCTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| 3UTR CAA 90 bp | GTAATGCTGTGCAGACCTCCTTCAAGAACAAAATTACAAGCTGCTTaGCTGCCCTGTCTGCCAAGGTTGTGGGGCTTCAACTTCCTACAG | + |
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Preference number: 2 (lower is better) Translates to: VMLCRPPSRTKLQAA*LPCLPRLWGFNFLQ Trigger: CTGTAGGAAGTTGAAGCCCCACAACCTTGGCAGACAGGGCAGCAAAGCAGCTTGTAATTTTGTTCTTGAAGGAGGTCTGCACAGCATTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| 3UTR GCA 72 bp | TGCACGCACTCAGACAAGGCCACTCCTTACCCTAAGTaGCACTGCCAAGCAAGGGAGATAGCCAAACTGCCC | + |
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Preference number: 3 (lower is better) Translates to: CTHSDKATPYPK*HCQAREIAKLP Trigger: GGGCAGTTTGGCTATCTCCCTTGCTTGGCAGTGGCACTTAGGGTAAGGAGTGGCCTTGTCTGAGTGCGTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| 3UTR GCA 72 bp | GGAGGTCATAAGGCTGGTCAGTGTGGGAATGTGCCCTaGACGCACTCAGACAAGGCCACTCCTTACCCTAAG | + |
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Preference number: 3 (lower is better) Translates to: GGHKAGQCGNVP*THSDKATPYPK Trigger: CTTAGGGTAAGGAGTGGCCTTGTCTGAGTGCGTGCAGGGCACATTCCCACACTGACCAGCCTTATGACCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| 3UTR TCA 72 bp | GATAGCCAAACTGCCCTCAGGAGGCAGGTTACACCCTaGCCAGAGGGTTACACTTCAGGCTGTGGAGACCAA | + |
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Preference number: 3 (lower is better) Translates to: DSQTALRRQVTP*PEGYTSGCGDQ Trigger: TTGGTCTCCACAGCCTGAAGTGTAACCCTCTGGTCAGGGTGTAACCTGCCTCCTGAGGGCAGTTTGGCTATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| 3UTR GCA 72 bp | CACTCAGACAAGGCCACTCCTTACCCTAAGTGCCACTaGCAAGCAAGGGAGATAGCCAAACTGCCCTCAGGA | + |
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Preference number: 3 (lower is better) Translates to: HSDKATPYPKCH*QAREIAKLPSG Trigger: TCCTGAGGGCAGTTTGGCTATCTCCCTTGCTTGGCAGTGGCACTTAGGGTAAGGAGTGGCCTTGTCTGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| 3UTR CCA 72 bp | TTACAAGCTGCTTTGCTGCCCTGTCTGCCAAGGTTGTaGGGCTTCAACTTCCTACAGCAGGGGTTCGACCAA | + |
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Preference number: 3 (lower is better) Translates to: LQAALLPCLPRL*GFNFLQQGFDQ Trigger: TTGGTCGAACCCCTGCTGTAGGAAGTTGAAGCCCCACAACCTTGGCAGACAGGGCAGCAAAGCAGCTTGTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| 3UTR-3UTR CAA 90 bp | CAAAATTACAAGCTGCTTTGCTGCCCTGTCTGCCAAGGTTGTGGGGCTTCAACTAAGGAATTGCAGGCTTaGGGTGGGCCAGTTAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: QNYKLLCCPVCQGCGASTKELQA*GGPVRL Trigger: CAGCCTAACTGGCCCACCCAAAGCCTGCAATTCCTT...AGTTGAAGCCCCACAACCTTGGCAGACAGGGCAGCAAAGCAGCTTGTAATTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| 3UTR TCA 72 bp | CAAAAGACTTATAGCCAAGGTGGGATATGGGGAAACTaGGGCTCAGAGTTTGTGATTCACTCCACGGAACAG | + |
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Preference number: 3 (lower is better) Translates to: QKTYSQGGIWGN*GSEFVIHSTEQ Trigger: CTGTTCCGTGGAGTGAATCACAAACTCTGAGCCTCAGTTTCCCCATATCCCACCTTGGCTATAAGTCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| CDS-3UTR CCA 90 bp | CACCATCCAGACCCATGTCTTCTCCCACACCAACAGATGGAGCAACCAAACCCACCCGTAAGTCGCGGATaGCATCGGATGCCGCGCGGC | + |
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Preference number: 4 (lower is better) Translates to: HHPDPCLLPHQQMEQPNPPVSRG*HRMPRG Trigger: GCCGCGCGGCATCCGATGCCATCCGCGACTTACGGG...TGGGTTTGGTTGCTCCATCTGTTGGTGTGGGAGAAGACATGGGTCTGGATGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000648640.1 |
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| CDS-3UTR GCA 90 bp | GTGCCACTGCCAAGCAAGGGAGATAGCCAAACTGCCCTCAGGAGGCAGGTTACAGGGGTCCACCCTAAGTaGCACTGCCAAGCAAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: VPLPSKGDSQTALRRQVTGVHPK*HCQARE Trigger: CTCCCTTGCTTGGCAGTGGCACTTAGGGTGGACCCC...TGTAACCTGCCTCCTGAGGGCAGTTTGGCTATCTCCCTTGCTTGGCAGTGGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480306.5 |
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| CDS-3UTR GCA 90 bp | TCTTCTCCCACACCAACAGATGGAGCAACCAAACCCATCCCCAGGATCATAGACGCGGATGGCATCGGATaGCGCGCGGCCAACACTCAC | + |
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Preference number: 4 (lower is better) Translates to: SSPTPTDGATKPIPRIIDADGIG*RAANTH Trigger: GTGAGTGTTGGCCGCGCGGCATCCGATGCCATCCGC...GTCTATGATCCTGGGGATGGGTTTGGTTGCTCCATCTGTTGGTGTGGGAGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648640.1 |
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| CDS-3UTR GCA 90 bp | CCAGACCCATGTCTTCTCCCACACCAACAGATGGAGCAACCAAACCCATCCCCACCACCCCGCAGCTTTTaGTCCCGACAGACACACGGT | + |
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Preference number: 4 (lower is better) Translates to: PDPCLLPHQQMEQPNPSPPPRSF*SRQTHG Trigger: ACCGTGTGTCTGTCGGGAGCAAAAGCTGCGGGGTGG...TGGGGATGGGTTTGGTTGCTCCATCTGTTGGTGTGGGAGAAGACATGGGTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000648640.1 |
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| CDS-3UTR GCA 90 bp | AAGGCTGGTCAGTGTGGGAATGTGCCCTGCACGCACTCAGACAAGGCCACTCCTGTCAGTGTGGGAATGTaGCCTGCACGCACTCAGACA | + |
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Preference number: 4 (lower is better) Translates to: KAGQCGNVPCTHSDKATPVSVGM*PARTQT Trigger: TGTCTGAGTGCGTGCAGGGCACATTCCCACACTGAC...AGGAGTGGCCTTGTCTGAGTGCGTGCAGGGCACATTCCCACACTGACCAGCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| CDS-3UTR TCA 90 bp | GCAAGGGAGATAGCCAAACTGCCCTCAGGAGGCAGGTTACACCCTGACCAGAGGAGGCAGGTTACACCCTaGCCAGAGGGTTACACTTCA | + |
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Preference number: 4 (lower is better) Translates to: AREIAKLPSGGRLHPDQRRQVTP*PEGYTS Trigger: TGAAGTGTAACCCTCTGGTCAGGGTGTAACCTGCCT...CCTCTGGTCAGGGTGTAACCTGCCTCCTGAGGGCAGTTTGGCTATCTCCCTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000480306.5 ENST00000481629.1 |
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| CDS-3UTR TCA 90 bp | GGCTGGTCAGTGTGGGAATGTGCCCTGCACGCACTCAGACAAGGCCACTCCTTACTACATGAGAGGCCTTaGCTGTGCACCTGGAACCAA | + |
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Preference number: 4 (lower is better) Translates to: GWSVWECALHALRQGHSLLHERP*LCTWNQ Trigger: TTGGTTCCAGGTGCACAGTCAAGGCCTCTCATGTAG...TAAGGAGTGGCCTTGTCTGAGTGCGTGCAGGGCACATTCCCACACTGACCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| CDS-3UTR GCA 90 bp | TGCCACTGCCAAGCAAGGGAGATAGCCAAACTGCCCTCAGGAGGCAGGTTACACCACCCTAAGTGCCACTaGCAAGCAAGGGAGATAGCC | + |
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Preference number: 4 (lower is better) Translates to: CHCQAREIAKLPSGGRLHHPKCH*QAREIA Trigger: GGCTATCTCCCTTGCTTGGCAGTGGCACTTAGGGTG...GTGTAACCTGCCTCCTGAGGGCAGTTTGGCTATCTCCCTTGCTTGGCAGTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480306.5 |
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| CDS-3UTR GCA 90 bp | GTGCCACTGCCAAGCAAGGGAGATAGCCAAACTGCCCTCAGGAGGCAGGTTACACTTTGCTGCCCTGTCTaGCAAGGTTGTGGGGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: VPLPSKGDSQTALRRQVTLCCPV*QGCGAS Trigger: TGAAGCCCCACAACCTTGGCAGACAGGGCAGCAAAG...TGTAACCTGCCTCCTGAGGGCAGTTTGGCTATCTCCCTTGCTTGGCAGTGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| CDS-3UTR GCA 90 bp | CGCACTCAGACAAGGCCACTCCTTACCCTAAGTGCCACTGCCAAGCAAGGGAGAACTCCTTACCCTAAGTaGCACTGCCAAGCAAGGGAG | + |
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Preference number: 4 (lower is better) Translates to: RTQTRPLLTLSATAKQGRTPYPK*HCQARE Trigger: CTCCCTTGCTTGGCAGTGGCACTTAGGGTAAGGAGT...TCTCCCTTGCTTGGCAGTGGCACTTAGGGTAAGGAGTGGCCTTGTCTGAGTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| CDS-3UTR CCA 90 bp | GGCTGGTCAGTGTGGGAATGTGCCCTGCACGCACTCAGACAAGGCCACTCCTTATGTCTGCCAAGGTTGTaGGGCTTCAACTTCCTACAG | + |
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Preference number: 4 (lower is better) Translates to: GWSVWECALHALRQGHSLCLPRL*GFNFLQ Trigger: CTGTAGGAAGTTGAAGCCCCACAACCTTGGCAGACA...TAAGGAGTGGCCTTGTCTGAGTGCGTGCAGGGCACATTCCCACACTGACCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| CDS-3UTR CCA 90 bp | GTGCCACTGCCAAGCAAGGGAGATAGCCAAACTGCCCTCAGGAGGCAGGTTACAAGCCAATACGCCACCTaGGTAATGCTGTGCAGACCT | + |
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Preference number: 4 (lower is better) Translates to: VPLPSKGDSQTALRRQVTSQYAT*VMLCRP Trigger: AGGTCTGCACAGCATTACCCAGGTGGCGTATTGGCT...TGTAACCTGCCTCCTGAGGGCAGTTTGGCTATCTCCCTTGCTTGGCAGTGGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| CDS-3UTR TCA 90 bp | TGCCACTGCCAAGCAAGGGAGATAGCCAAACTGCCCTCAGGAGGCAGGTTACACGAGGCTCAGAGTTTGTaGTTCACTCCACGGAACAGA | + |
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Preference number: 4 (lower is better) Translates to: CHCQAREIAKLPSGGRLHEAQSL*FTPRNR Trigger: TCTGTTCCGTGGAGTGAATCACAAACTCTGAGCCTC...GTGTAACCTGCCTCCTGAGGGCAGTTTGGCTATCTCCCTTGCTTGGCAGTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| CDS-3UTR GCA 90 bp | TGCCACTGCCAAGCAAGGGAGATAGCCAAACTGCCCTCAGGAGGCAGGTTACACTACAAGCTGCTTTGCTaGCCTGTCTGCCAAGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: CHCQAREIAKLPSGGRLHYKLLC*PVCQGC Trigger: ACAACCTTGGCAGACAGGGCAGCAAAGCAGCTTGTA...GTGTAACCTGCCTCCTGAGGGCAGTTTGGCTATCTCCCTTGCTTGGCAGTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| CDS-3UTR GCA 90 bp | AAGGCTGGTCAGTGTGGGAATGTGCCCTGCACGCACTCAGACAAGGCCACTCCTACCTGGGTAATGCTGTaGAGACCTCCTTCAAGAACA | + |
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Preference number: 4 (lower is better) Translates to: KAGQCGNVPCTHSDKATPTWVML*RPPSRT Trigger: TGTTCTTGAAGGAGGTCTGCACAGCATTACCCAGGT...AGGAGTGGCCTTGTCTGAGTGCGTGCAGGGCACATTCCCACACTGACCAGCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| CDS-3UTR CCA 90 bp | ACACCCCACCATCCAGACCCATGTCTTCTCCCACACCAACAGATGGAGCAACCACATTCCCCAATAAAGTaGCTTTCCCTGCCATCCCCC | + |
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Preference number: 4 (lower is better) Translates to: TPHHPDPCLLPHQQMEQPHSPIK*LSLPSP Trigger: GGGGGATGGCAGGGAAAGCCACTTTATTGGGGAATG...TGGTTGCTCCATCTGTTGGTGTGGGAGAAGACATGGGTCTGGATGGTGGGGTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648640.1 |
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| CDS-3UTR GCA 90 bp | TTACACCCTGACCAGAGGGTTACACTTCAGGCTGTGGAGACCAAGGAAAGCTTTTGTGGGAATGTGCCCTaGACGCACTCAGACAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: LHPDQRVTLQAVETKESFCGNVP*THSDKA Trigger: GGCCTTGTCTGAGTGCGTGCAGGGCACATTCCCACA...AAAGCTTTCCTTGGTCTCCACAGCCTGAAGTGTAACCCTCTGGTCAGGGTGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| CDS-3UTR CCA 90 bp | TCCCACACCAACAGATGGAGCAACCAAACCCATCCCCAGGATCATAGACAGAGGTCCCACACCAACAGATaGAGCAACCAAACCCATCCC | + |
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Preference number: 4 (lower is better) Translates to: SHTNRWSNQTHPQDHRQRSHTNR*SNQTHP Trigger: GGGATGGGTTTGGTTGCTCCATCTGTTGGTGTGGGA...CCTCTGTCTATGATCCTGGGGATGGGTTTGGTTGCTCCATCTGTTGGTGTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000294189.11 ENST00000648640.1 |
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| 3UTR CAA 72 bp | AAATTACAAGCTGCTTTGCTGCCCTGTCTGCCAAGGTaGTGGGGCTTCAACTTCCTACAGCAGGGGTTCGAC | + |
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Preference number: 4 (lower is better) Translates to: KLQAALLPCLPR*WGFNFLQQGFD Trigger: GTCGAACCCCTGCTGTAGGAAGTTGAAGCCCCACAACCTTGGCAGACAGGGCAGCAAAGCAGCTTGTAATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| CDS-3UTR CCA 90 bp | TCTTCTCCCACACCAACAGATGGAGCAACCAAACCCATCCCCAGGATCATAGACTCCCACACCAACAGATaGAGCAACCAAACCCATCCC | + |
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Preference number: 4 (lower is better) Translates to: SSPTPTDGATKPIPRIIDSHTNR*SNQTHP Trigger: GGGATGGGTTTGGTTGCTCCATCTGTTGGTGTGGGA...GTCTATGATCCTGGGGATGGGTTTGGTTGCTCCATCTGTTGGTGTGGGAGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000294189.11 ENST00000648640.1 |
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| CDS-3UTR GCA 90 bp | TCAGGGACACCCCCTCCCCTCTTTAGAAGAAGGTGTCAATTAAATACCAAGTCTGGGCCAGTTAGGCTGTaGTCAGGCAGAAGCCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: SGTPPPLFRRRCQLNTKSGPVRL*SGRSQS Trigger: GCTTTGGCTTCTGCCTGAGCACAGCCTAACTGGCCC...AGACTTGGTATTTAATTGACACCTTCTTCTAAAGAGGGGAGGGGGTGTCCCTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| CDS-3UTR CCA 90 bp | AGAACAAAATTACAAGCTGCTTTGCTGCCCTGTCTGCCAAGGTTGTGGGGCTTCAGGAATTGCAGGCTTTaGGTGGGCCAGTTAGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: RTKLQAALLPCLPRLWGFRNCRL*VGQLGC Trigger: ACAGCCTAACTGGCCCACCCAAAGCCTGCAATTCCT...GAAGCCCCACAACCTTGGCAGACAGGGCAGCAAAGCAGCTTGTAATTTTGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| CDS-3UTR TCA 90 bp | AAAATTACAAGCTGCTTTGCTGCCCTGTCTGCCAAGGTTGTGGGGCTTCAACTTAGGCAGGTTACACCCTaGCCAGAGGGTTACACTTCA | + |
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Preference number: 4 (lower is better) Translates to: KITSCFAALSAKVVGLQLRQVTP*PEGYTS Trigger: TGAAGTGTAACCCTCTGGTCAGGGTGTAACCTGCCT...AAGTTGAAGCCCCACAACCTTGGCAGACAGGGCAGCAAAGCAGCTTGTAATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| CDS-3UTR TCA 90 bp | GAACAAAATTACAAGCTGCTTTGCTGCCCTGTCTGCCAAGGTTGTGGGGCTTCAAAAGACACTTCCATGTaGTTCAGTGCACTCACCCCC | + |
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Preference number: 4 (lower is better) Translates to: EQNYKLLCCPVCQGCGASKDTSM*FSALTP Trigger: GGGGGTGAGTGCACTGAATCACATGGAAGTGTCTTT...TGAAGCCCCACAACCTTGGCAGACAGGGCAGCAAAGCAGCTTGTAATTTTGTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| 3UTR CAA 72 bp | TGCAGACCTCCTTCAAGAACAAAATTACAAGCTGCTTaGCTGCCCTGTCTGCCAAGGTTGTGGGGCTTCAAC | + |
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Preference number: 4 (lower is better) Translates to: CRPPSRTKLQAA*LPCLPRLWGFN Trigger: GTTGAAGCCCCACAACCTTGGCAGACAGGGCAGCAAAGCAGCTTGTAATTTTGTTCTTGAAGGAGGTCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| CDS-3UTR TCA 90 bp | GAACAAAATTACAAGCTGCTTTGCTGCCCTGTCTGCCAAGGTTGTGGGGCTTCAGGGATATGGGGAAACTaGGGCTCAGAGTTTGTGATT | + |
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Preference number: 4 (lower is better) Translates to: EQNYKLLCCPVCQGCGASGIWGN*GSEFVI Trigger: AATCACAAACTCTGAGCCTCAGTTTCCCCATATCCC...TGAAGCCCCACAACCTTGGCAGACAGGGCAGCAAAGCAGCTTGTAATTTTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| CDS-3UTR GCA 90 bp | TCAGAGTTTGTGATTCACTCCACGGAACAGAGAGCAAAAGTAAAGGGAAGGAACTACCCTAAGTGCCACTaGCAAGCAAGGGAGATAGCC | + |
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Preference number: 4 (lower is better) Translates to: SEFVIHSTEQRAKVKGRNYPKCH*QAREIA Trigger: GGCTATCTCCCTTGCTTGGCAGTGGCACTTAGGGTA...GTTCCTTCCCTTTACTTTTGCTCTCTGTTCCGTGGAGTGAATCACAAACTCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| CDS-3UTR GCA 90 bp | GACCAGAGGGTTACACTTCAGGCTGTGGAGACCAAGGAAAGCTTTATTATGGGTAATTACAAGCTGCTTTaGTGCCCTGTCTGCCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: DQRVTLQAVETKESFIMGNYKLL*CPVCQG Trigger: ACCTTGGCAGACAGGGCAGCAAAGCAGCTTGTAATT...ACCCATAATAAAGCTTTCCTTGGTCTCCACAGCCTGAAGTGTAACCCTCTGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| CDS-3UTR GCA 90 bp | TTACACCCTGACCAGAGGGTTACACTTCAGGCTGTGGAGACCAAGGAAAGCTTTAACAAAATTACAAGCTaGTTTGCTGCCCTGTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: LHPDQRVTLQAVETKESFNKITS*FAALSA Trigger: GGCAGACAGGGCAGCAAAGCAGCTTGTAATTTTGTT...AAAGCTTTCCTTGGTCTCCACAGCCTGAAGTGTAACCCTCTGGTCAGGGTGTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| CDS-3UTR GCA 90 bp | GTTACACTTCAGGCTGTGGAGACCAAGGAAAGCTTTATTATGGGTCTGGTAGGGTTCCATGTGATTCAGTaGACTCACCCCCTTAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: VTLQAVETKESFIMGLVGFHVIQ*THPLKR Trigger: TCTCTTAAGGGGGTGAGTGCACTGAATCACATGGAA...CCCTACCAGACCCATAATAAAGCTTTCCTTGGTCTCCACAGCCTGAAGTGTAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| CDS-3UTR CCA 90 bp | AACAAAATTACAAGCTGCTTTGCTGCCCTGTCTGCCAAGGTTGTGGGGCTTCAAATTAAATACCAAGTCTaGTCCAAAAGACTTATAGCC | + |
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Preference number: 4 (lower is better) Translates to: NKITSCFAALSAKVVGLQIKYQV*SKRLIA Trigger: GGCTATAAGTCTTTTGGACCAGACTTGGTATTTAAT...TTGAAGCCCCACAACCTTGGCAGACAGGGCAGCAAAGCAGCTTGTAATTTTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| CDS-3UTR CAA 90 bp | CCAGACCCATGTCTTCTCCCACACCAACAGATGGAGCAACCAAACCCATCCCCACCCACCCCGCAGCTTTaGCTCCCGACAGACACACGG | + |
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Preference number: 5 (lower is better) Translates to: PDPCLLPHQQMEQPNPSPPTPQL*LPTDTR Trigger: CCGTGTGTCTGTCGGGAGCAAAAGCTGCGGGGTGGG...TGGGGATGGGTTTGGTTGCTCCATCTGTTGGTGTGGGAGAAGACATGGGTCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000648640.1 |
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| CDS TCA 90 bp | GGCCCACAATGGAAACGTGCCCCTTCATCTCTGTCCCAGTTTGCCTaGACCAGTCCTTGCCAGGGTCTGGGATGTAGGCAGGGCCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: GPQWKRAPSSLSQFA*TSPCQGLGCRQGPK Trigger: TTTTGGGCCCTGCCTACATCCCAGACCCTGGCAAGGACTGGTTCAGGCAAACTGGGACAGAGATGAAGGGGCACGTTTCCATTGTGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486565.1 |
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| CDS-3UTR CAA 90 bp | AGGAATTGCAGGCTTTGGGTGGGCCAGTTAGGCTGTGCTCAGGCAGAAGCCAAACCCTGTCTGCCAAGGTaGTGGGGCTTCAACTTCCTA | + |
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Preference number: 5 (lower is better) Translates to: RNCRLWVGQLGCAQAEAKPCLPR*WGFNFL Trigger: TAGGAAGTTGAAGCCCCACAACCTTGGCAGACAGGG...TTTGGCTTCTGCCTGAGCACAGCCTAACTGGCCCACCCAAAGCCTGCAATTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| CDS-3UTR CAA 90 bp | ACGCACTCAGACAAGGCCACTCCTTACCCTAAGTGCCACTGCCAAGCAAGGGAGAAATTACAAGCTGCTTaGCTGCCCTGTCTGCCAAGG | + |
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Preference number: 5 (lower is better) Translates to: THSDKATPYPKCHCQAREKLQAA*LPCLPR Trigger: CCTTGGCAGACAGGGCAGCAAAGCAGCTTGTAATTT...CTCCCTTGCTTGGCAGTGGCACTTAGGGTAAGGAGTGGCCTTGTCTGAGTGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| CDS TCA 90 bp | AGCAAGGGAGATAGCCAAACTGCCCTCAGGAGGCAGGTTACACCCTaGCCAGAGGGTTACACTTCAGGCCCCTTAAGAGATTCGTATCTT | + |
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Preference number: 5 (lower is better) Translates to: SKGDSQTALRRQVTP*PEGYTSGPLRDSYL Trigger: AAGATACGAATCTCTTAAGGGGCCTGAAGTGTAACCCTCTGGTCAGGGTGTAACCTGCCTCCTGAGGGCAGTTTGGCTATCTCCCTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000480306.5 |
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| CDS CCA 90 bp | GAACTTTCCTCTAATAAGACCACCCAACATCACAGCTGGCAAGTCTaGGAGAACCAACACTTCCTACAGCAGCTACACTTGAGATATGGG | + |
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Preference number: 5 (lower is better) Translates to: ELSSNKTTQHHSWQV*ENQHFLQQLHLRYG Trigger: CCCATATCTCAAGTGTAGCTGCTGTAGGAAGTGTTGGTTCTCCCAGACTTGCCAGCTGTGATGTTGGGTGGTCTTATTAGAGGAAAGTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486565.1 |
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| CDS CCA 90 bp | GCCAACAAAGAACTTTCCTCTAATAAGACCACCCAACATCACAGCTaGCAAGTCTGGGAGAACCAACACTTCCTACAGCAGCTACACTTG | + |
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Preference number: 5 (lower is better) Translates to: ANKELSSNKTTQHHS*QVWENQHFLQQLHL Trigger: CAAGTGTAGCTGCTGTAGGAAGTGTTGGTTCTCCCAGACTTGCCAGCTGTGATGTTGGGTGGTCTTATTAGAGGAAAGTTCTTTGTTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486565.1 |
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| CDS-3UTR CAA 90 bp | CCTCCCCTCTTTAGAAGAAGGTGTCAATTAAATACCAAGTCTGGTCCAAAAGACAAGGAATTGCAGGCTTaGGGTGGGCCAGTTAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: PPLFRRRCQLNTKSGPKDKELQA*GGPVRL Trigger: CAGCCTAACTGGCCCACCCAAAGCCTGCAATTCCTT...GTCTTTTGGACCAGACTTGGTATTTAATTGACACCTTCTTCTAAAGAGGGGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000481629.1 |
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| CDS CAA 90 bp | ATCCCCCTCCTAGGACCTAGAAGCACCATTCCCACCCCGCAGCTTTaGCTCCCGACAGACACACGGTCGGTCACCAGTCCTCTCCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: IPLLGPRSTIPTPQL*LPTDTRSVTSPLRS Trigger: GCTGCGGAGAGGACTGGTGACCGACCGTGTGTCTGTCGGGAGCAAAAGCTGCGGGGTGGGAATGGTGCTTCTAGGTCCTAGGAGGGGGAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000648640.1 |
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| CDS CAA 90 bp | CCTCAGGCCCACAATGGAAACGTGCCCCTTCATCTCTGTCCCAGTTaGCCTGAACCAGTCCTTGCCAGGGTCTGGGATGTAGGCAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: PQAHNGNVPLHLCPS*PEPVLARVWDVGRA Trigger: GGCCCTGCCTACATCCCAGACCCTGGCAAGGACTGGTTCAGGCAAACTGGGACAGAGATGAAGGGGCACGTTTCCATTGTGGGCCTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486565.1 |
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| CDS CAA 72 bp | CTAGGACCTAGAAGCACCATTCCCACCCCGCAGCTTTaGCTCCCGACAGACACACGGTCGGTCACCAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: LGPRSTIPTPQL*LPTDTRSVTSP Trigger: AGGACTGGTGACCGACCGTGTGTCTGTCGGGAGCAAAAGCTGCGGGGTGGGAATGGTGCTTCTAGGTCCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000648640.1 |
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| CDS CAA 72 bp | CACAATGGAAACGTGCCCCTTCATCTCTGTCCCAGTTaGCCTGAACCAGTCCTTGCCAGGGTCTGGGATGTA | + |
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Preference number: 6 (lower is better) Translates to: HNGNVPLHLCPS*PEPVLARVWDV Trigger: TACATCCCAGACCCTGGCAAGGACTGGTTCAGGCAAACTGGGACAGAGATGAAGGGGCACGTTTCCATTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486565.1 |
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| CDS CCA 72 bp | TCTAATAAGACCACCCAACATCACAGCTGGCAAGTCTaGGAGAACCAACACTTCCTACAGCAGCTACACTTG | + |
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Preference number: 6 (lower is better) Translates to: SNKTTQHHSWQV*ENQHFLQQLHL Trigger: CAAGTGTAGCTGCTGTAGGAAGTGTTGGTTCTCCCAGACTTGCCAGCTGTGATGTTGGGTGGTCTTATTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486565.1 |
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| CDS CCA 72 bp | GAACTTTCCTCTAATAAGACCACCCAACATCACAGCTaGCAAGTCTGGGAGAACCAACACTTCCTACAGCAG | + |
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Preference number: 6 (lower is better) Translates to: ELSSNKTTQHHS*QVWENQHFLQQ Trigger: CTGCTGTAGGAAGTGTTGGTTCTCCCAGACTTGCCAGCTGTGATGTTGGGTGGTCTTATTAGAGGAAAGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486565.1 |
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| CDS TCA 72 bp | ACTGTGCACCTGGAACCAAGAAAAGACACTTCCATGTaGTTCAGTGCACTCACCCCCTTAAGAGATTCGTAT | + |
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Preference number: 6 (lower is better) Translates to: TVHLEPRKDTSM*FSALTPLRDSY Trigger: ATACGAATCTCTTAAGGGGGTGAGTGCACTGAATCACATGGAAGTGTCTTTTCTTGGTTCCAGGTGCACAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000481629.1 ENST00000486565.1 |
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| CDS CAA 90 bp | AGCTGGCAAGTCTGGGAGAACCAACACTTCCTACAGCAGCTACACTaGAGATATGGGAAACCCTTACTACTAAATGCAAAACACTCTGTA | + |
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Preference number: 6 (lower is better) Translates to: SWQVWENQHFLQQLH*RYGKPLLLNAKHSV Trigger: TACAGAGTGTTTTGCATTTAGTAGTAAGGGTTTCCCATATCTCAAGTGTAGCTGCTGTAGGAAGTGTTGGTTCTCCCAGACTTGCCAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000486565.1 |
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| CDS CAA 72 bp | GTCTGGGAGAACCAACACTTCCTACAGCAGCTACACTaGAGATATGGGAAACCCTTACTACTAAATGCAAAA | + |
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Preference number: 6 (lower is better) Translates to: VWENQHFLQQLH*RYGKPLLLNAK Trigger: TTTTGCATTTAGTAGTAAGGGTTTCCCATATCTCAAGTGTAGCTGCTGTAGGAAGTGTTGGTTCTCCCAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486565.1 |
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| CDS TCA 72 bp | ATCTCTAAACCTATAAACCCTAAAGTTATTACTGGGTaGAATCAATCAGCCTCAGGCCCACAATGGAAACGT | + |
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Preference number: 6 (lower is better) Translates to: ISKPINPKVITG*NQSASGPQWKR Trigger: ACGTTTCCATTGTGGGCCTGAGGCTGATTGATTTCACCCAGTAATAACTTTAGGGTTTATAGGTTTAGAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000486565.1 |
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