RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RPL28 (Homo sapiens)

Ensembl gene IDs: ENSG00000108107

Ensembl transcript IDs: ENST00000344063.7, ENST00000426763.3, ENST00000428193.6, ENST00000431533.6, ENST00000558752.1, ENST00000558815.5, ENST00000559463.5, ENST00000560055.5, ENST00000560583.5, ENST00000560881.5

Found 338 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTGACAAGTCGGCCGAGAGGGAAGCCGGTACCCAGACCAACACCCTaGCGCCAGGGATGCCCGCCGCGATGGCAGTTACCGCTCTTCCTG +
Preference number: 1 (lower is better)
Translates to: LTSRPRGKPVPRPTP*RQGCPPRWQLPLFL
Trigger: CAGGAAGAGCGGTAACTGCCATCGCGGCGGGCATCCCTGGCGCCAGGGTGTTGGTCTGGGTACCGGCTTCCCTCTCGGCCGACTTGTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431533.6
3UTR GCA 90 bp CCGAGAGGGAAGCCGGTACCCAGACCAACACCCTGGCGCCAGGGATaGCCGCCGCGATGGCAGTTACCGCTCTTCCTGCCTGACAGTAAA +
Preference number: 1 (lower is better)
Translates to: PRGKPVPRPTPWRQG*PPRWQLPLFLPDSK
Trigger: TTTACTGTCAGGCAGGAAGAGCGGTAACTGCCATCGCGGCGGGCATCCCTGGCGCCAGGGTGTTGGTCTGGGTACCGGCTTCCCTCTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431533.6
3UTR CCA 90 bp TGGTTCCTCCACCCCAACCCACCGATAGCATTCAGATACCAGACGTaGCCTCCCCAGCCCAGCCACACAGACAGGCTGGCCACCCGCAGG +
Preference number: 1 (lower is better)
Translates to: WFLHPNPPIAFRYQT*PPQPSHTDRLATRR
Trigger: CCTGCGGGTGGCCAGCCTGTCTGTGTGGCTGGGCTGGGGAGGCCACGTCTGGTATCTGAATGCTATCGGTGGGTTGGGGTGGAGGAACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR TCA 90 bp TTTACAGGTGAGGACACGGGCTCAGACGCGCGCGGCTCACAGAGCTaGCAAGTCGGCCGAGAGGGAAGCCGGTACCCAGACCAACACCCT +
Preference number: 1 (lower is better)
Translates to: FTGEDTGSDARGSQS*QVGREGSRYPDQHP
Trigger: AGGGTGTTGGTCTGGGTACCGGCTTCCCTCTCGGCCGACTTGTCAGCTCTGTGAGCCGCGCGCGTCTGAGCCCGTGTCCTCACCTGTAAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431533.6
3UTR CCA 90 bp CTGTGGGGAGTCTGGAGTCCCCAGCGCTCTGCACAACTTTGGGCTTaGCAGCCTTCCAGGGTGCGCCCTACGCTCACTCACCATGCAGCT +
Preference number: 1 (lower is better)
Translates to: LWGVWSPQRSAQLWA*QPSRVRPTLTHHAA
Trigger: AGCTGCATGGTGAGTGAGCGTAGGGCGCACCCTGGAAGGCTGCCAAGCCCAAAGTTGTGCAGAGCGCTGGGGACTCCAGACTCCCCACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CCA 90 bp CTGCTGCTGTGGGGAGTCTGGAGTCCCCAGCGCTCTGCACAACTTTaGGCTTGGCAGCCTTCCAGGGTGCGCCCTACGCTCACTCACCAT +
Preference number: 1 (lower is better)
Translates to: LLLWGVWSPQRSAQL*AWQPSRVRPTLTHH
Trigger: ATGGTGAGTGAGCGTAGGGCGCACCCTGGAAGGCTGCCAAGCCCAAAGTTGTGCAGAGCGCTGGGGACTCCAGACTCCCCACAGCAGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CCA 90 bp GGAGGCTGGGAAAGCTCACAGCCCCACAGGACGGCGGGGCAGACCTaGAGCCACCAGGCATTACTGCACATGGATCTGGCATGTCTTCCA +
Preference number: 1 (lower is better)
Translates to: GGWESSQPHRTAGQT*SHQALLHMDLACLP
Trigger: TGGAAGACATGCCAGATCCATGTGCAGTAATGCCTGGTGGCTCCAGGTCTGCCCCGCCGTCCTGTGGGGCTGTGAGCTTTCCCAGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CCA 90 bp AACAGAGGATGCCTCAGTCCCGAGTCTCTGCTGCTGTGGGGAGTCTaGAGTCCCCAGCGCTCTGCACAACTTTGGGCTTGGCAGCCTTCC +
Preference number: 1 (lower is better)
Translates to: NRGCLSPESLLLWGV*SPQRSAQLWAWQPS
Trigger: GGAAGGCTGCCAAGCCCAAAGTTGTGCAGAGCGCTGGGGACTCCAGACTCCCCACAGCAGCAGAGACTCGGGACTGAGGCATCCTCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR TCA 90 bp AACCCCAGGCCCATCCCCACAGCAGTGGTTCAACATCAGCTTGGCTaGGAGGCCCAGCCTCACTCAGGCCAGTCCCTTAGTCTAGGAAGG +
Preference number: 1 (lower is better)
Translates to: NPRPIPTAVVQHQLG*EAQPHSGQSLSLGR
Trigger: CCTTCCTAGACTAAGGGACTGGCCTGAGTGAGGCTGGGCCTCTCAGCCAAGCTGATGTTGAACCACTGCTGTGGGGATGGGCCTGGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428193.6
3UTR GCA 90 bp GGTGGGGCTCATGGGCTCACTGCAGCCTCATACTCTTGGCTCAAGTaGTCCGCTCACCTCAGCCTCTACTCAACCTCTGAGGAGCTGGGA +
Preference number: 1 (lower is better)
Translates to: GGAHGLTAASYSWLK*SAHLSLYSTSEELG
Trigger: TCCCAGCTCCTCAGAGGTTGAGTAGAGGCTGAGGTGAGCGGAGCACTTGAGCCAAGAGTATGAGGCTGCAGTGAGCCCATGAGCCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR GCA 90 bp TTGAATCGGGTACCCCAGGATGGCAGGAACCAGGGGTGCCATGGATaGTGGATCCTTGGTCCCTGGCAGTGGCTGACAGAGTTAGGTGCC +
Preference number: 1 (lower is better)
Translates to: LNRVPQDGRNQGCHG*WILGPWQWLTELGA
Trigger: GGCACCTAACTCTGTCAGCCACTGCCAGGGACCAAGGATCCAGCATCCATGGCACCCCTGGTTCCTGCCATCCTGGGGTACCCGATTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CCA 90 bp ACCCCAGGATGGCAGGAACCAGGGGTGCCATGGATGCTGGATCCTTaGTCCCTGGCAGTGGCTGACAGAGTTAGGTGCCCAGGAAACATG +
Preference number: 1 (lower is better)
Translates to: TPGWQEPGVPWMLDP*SLAVADRVRCPGNM
Trigger: CATGTTTCCTGGGCACCTAACTCTGTCAGCCACTGCCAGGGACCAAGGATCCAGCATCCATGGCACCCCTGGTTCCTGCCATCCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CCA 90 bp TGTCCTGTGAACAGAGGATGCCTCAGTCCCGAGTCTCTGCTGCTGTaGGGAGTCTGGAGTCCCCAGCGCTCTGCACAACTTTGGGCTTGG +
Preference number: 1 (lower is better)
Translates to: CPVNRGCLSPESLLL*GVWSPQRSAQLWAW
Trigger: CCAAGCCCAAAGTTGTGCAGAGCGCTGGGGACTCCAGACTCCCCACAGCAGCAGAGACTCGGGACTGAGGCATCCTCTGTTCACAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR TCA 90 bp CAGGAAAGCTTGGGTGACAGGGTGGCCCAGGAGCGGCCACTGAGATaGGACCTAAGTGACAAGAGCCAGCTCAAAGAGACAGGGGAGGGA +
Preference number: 1 (lower is better)
Translates to: QESLGDRVAQERPLR*DLSDKSQLKETGEG
Trigger: TCCCTCCCCTGTCTCTTTGAGCTGGCTCTTGTCACTTAGGTCTCATCTCAGTGGCCGCTCCTGGGCCACCCTGTCACCCAAGCTTTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR GCA 90 bp AGTCCTTCTTTGAATCGGGTACCCCAGGATGGCAGGAACCAGGGGTaGCATGGATGCTGGATCCTTGGTCCCTGGCAGTGGCTGACAGAG +
Preference number: 1 (lower is better)
Translates to: SPSLNRVPQDGRNQG*HGCWILGPWQWLTE
Trigger: CTCTGTCAGCCACTGCCAGGGACCAAGGATCCAGCATCCATGGCACCCCTGGTTCCTGCCATCCTGGGGTACCCGATTCAAAGAAGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR TCA 90 bp GGCAGCGCCAAACAGCCTGGGCTGGAAATGCAGCTGAGGACAGAATaGTATTCACAAACACGGGCAGGAGGCTGGGAAAGCTCACAGCCC +
Preference number: 1 (lower is better)
Translates to: GSAKQPGLEMQLRTE*YSQTRAGGWESSQP
Trigger: GGGCTGTGAGCTTTCCCAGCCTCCTGCCCGTGTTTGTGAATATCATTCTGTCCTCAGCTGCATTTCCAGCCCAGGCTGTTTGGCGCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR GCA 90 bp CTGGAGGACGGGAGTAGGGGGACAATGCTAAGGCTGCTCAATGCCTaGTGGCTGTACCCTGGGGCTGCCATCTCCCTTACAGTTATAAGC +
Preference number: 1 (lower is better)
Translates to: LEDGSRGTMLRLLNA*WLYPGAAISLTVIS
Trigger: GCTTATAACTGTAAGGGAGATGGCAGCCCCAGGGTACAGCCAGCAGGCATTGAGCAGCCTTAGCATTGTCCCCCTACTCCCGTCCTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR GCA 90 bp ATGAGGGTACGAAGACACAGAGAGGTTGAGGAACTTGCCCAAGGTTaGACAGCCACCGAGCAGCAGAGCCCTGACCCAGTAGATGCCAGC +
Preference number: 1 (lower is better)
Translates to: MRVRRHREVEELAQG*TATEQQSPDPVDAS
Trigger: GCTGGCATCTACTGGGTCAGGGCTCTGCTGCTCGGTGGCTGTGCAACCTTGGGCAAGTTCCTCAACCTCTCTGTGTCTTCGTACCCTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CCA 90 bp CTTTCCCCATCCAGGCCTCACTGTGTGTCATGGTGTCTTCCAGGCTaGAGTGTAGTGGTGGGGCTCATGGGCTCACTGCAGCCTCATACT +
Preference number: 1 (lower is better)
Translates to: LSPSRPHCVSWCLPG*SVVVGLMGSLQPHT
Trigger: AGTATGAGGCTGCAGTGAGCCCATGAGCCCCACCACTACACTCCAGCCTGGAAGACACCATGACACACAGTGAGGCCTGGATGGGGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CCA 90 bp TTCTTTGAATCGGGTACCCCAGGATGGCAGGAACCAGGGGTGCCATaGATGCTGGATCCTTGGTCCCTGGCAGTGGCTGACAGAGTTAGG +
Preference number: 1 (lower is better)
Translates to: FFESGTPGWQEPGVP*MLDPWSLAVADRVR
Trigger: CCTAACTCTGTCAGCCACTGCCAGGGACCAAGGATCCAGCATCCATGGCACCCCTGGTTCCTGCCATCCTGGGGTACCCGATTCAAAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR TCA 90 bp TGGTCCCTGGCAGTGGCTGACAGAGTTAGGTGCCCAGGAAACATGTaGGGATCAACAGCAGGACTCTTTCCCCATCCAGGCCTCACTGTG +
Preference number: 1 (lower is better)
Translates to: WSLAVADRVRCPGNM*GSTAGLFPHPGLTV
Trigger: CACAGTGAGGCCTGGATGGGGAAAGAGTCCTGCTGTTGATCCTCACATGTTTCCTGGGCACCTAACTCTGTCAGCCACTGCCAGGGACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR TCA 90 bp TCCCCAAGTGCCAAGCAATTGGCTGCTCCCTGGACTACGTGTCCCTaGGACAGGAGGATCACTAGCCAACAGACTGCGTTTGTTGCTGCC +
Preference number: 1 (lower is better)
Translates to: SPSAKQLAAPWTTCP*DRRITSQQTAFVAA
Trigger: GGCAGCAACAAACGCAGTCTGTTGGCTAGTGATCCTCCTGTCTCAGGGACACGTAGTCCAGGGAGCAGCCAATTGCTTGGCACTTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428193.6
3UTR GCA 90 bp GACAATGCTAAGGCTGCTCAATGCCTGCTGGCTGTACCCTGGGGCTaGCATCTCCCTTACAGTTATAAGCCACCACCCACCAAGTTGCCC +
Preference number: 1 (lower is better)
Translates to: DNAKAAQCLLAVPWG*HLPYSYKPPPTKLP
Trigger: GGGCAACTTGGTGGGTGGTGGCTTATAACTGTAAGGGAGATGGCAGCCCCAGGGTACAGCCAGCAGGCATTGAGCAGCCTTAGCATTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR GCA 90 bp GAAATGGTAATTCACAGCAGACAGGGGCTGGCAAGTGGTCAGATCTaGTCTCCTTCGAGCTGGGCAAGACTGGAGCAGACAGGACTGAGG +
Preference number: 1 (lower is better)
Translates to: EMVIHSRQGLASGQI*SPSSWARLEQTGLR
Trigger: CCTCAGTCCTGTCTGCTCCAGTCTTGCCCAGCTCGAAGGAGAGCAGATCTGACCACTTGCCAGCCCCTGTCTGCTGTGAATTACCATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CCA 90 bp ACCTGGGGGAGGTTCTTTCAGCACTCTGGATGTGTCCCCACTGCCTaGGCCTGGTTTCTGATGAGGGCAGCTACTAACTTTATCAGGGAC +
Preference number: 1 (lower is better)
Translates to: TWGRFFQHSGCVPTA*AWFLMRAATNFIRD
Trigger: GTCCCTGATAAAGTTAGTAGCTGCCCTCATCAGAAACCAGGCCCAGGCAGTGGGGACACATCCAGAGTGCTGAAAGAACCTCCCCCAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR TCA 90 bp TACCATTCCTGGGCAGCGCCAAACAGCCTGGGCTGGAAATGCAGCTaGGGACAGAATGATATTCACAAACACGGGCAGGAGGCTGGGAAA +
Preference number: 1 (lower is better)
Translates to: YHSWAAPNSLGWKCS*GQNDIHKHGQEAGK
Trigger: TTTCCCAGCCTCCTGCCCGTGTTTGTGAATATCATTCTGTCCTCAGCTGCATTTCCAGCCCAGGCTGTTTGGCGCTGCCCAGGAATGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR GCA 90 bp AAACATGAGACAGATAAACCTGCCAGCTTGTGGGCTGCAAATCAGTaGTGTGGAGGACAACTGAAGCAGGTGCCAGGGGAGAGGCCTCAC +
Preference number: 1 (lower is better)
Translates to: KHETDKPASLWAANQ*CGGQLKQVPGERPH
Trigger: GTGAGGCCTCTCCCCTGGCACCTGCTTCAGTTGTCCTCCACAGCACTGATTTGCAGCCCACAAGCTGGCAGGTTTATCTGTCTCATGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR TCA 90 bp CCATGCAGCTACTGGACTAAGAGCTGGAGAGACAGCAGTGAACACTaGGACACCTGCCTTATGCAGGGCTGTGAAAGGCACTCAAAATGG +
Preference number: 1 (lower is better)
Translates to: PCSYWTKSWRDSSEH*DTCLMQGCERHSKW
Trigger: CCATTTTGAGTGCCTTTCACAGCCCTGCATAAGGCAGGTGTCTCAGTGTTCACTGCTGTCTCTCCAGCTCTTAGTCCAGTAGCTGCATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR GCA 90 bp GAGATGAGGTTGCATCAAGTAAAGCCCATCCCCTCCAAATGTGGCTaGACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCCTCCCGT +
Preference number: 1 (lower is better)
Translates to: EMRLHQVKPIPSKCG*THSLDAKVISSSSR
Trigger: ACGGGAGGAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGAGGGGATGGGCTTTACTTGATGCAACCTCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
3UTR TCA 90 bp CCTCCAGATGGACAAGGTGACATGCAGAGTTTTGATGACATGGCCTaGATGACAACACACAGGGCCAGAGCTCCCCAGAGCGTTTCAAAA +
Preference number: 1 (lower is better)
Translates to: PPDGQGDMQSFDDMA*MTTHRARAPQSVSK
Trigger: TTTTGAAACGCTCTGGGGAGCTCTGGCCCTGTGTGTTGTCATTCAGGCCATGTCATCAAAACTCTGCATGTCACCTTGTCCATCTGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
3UTR CCA 90 bp CTCAGAGATGAGGTTGCATCAAGTAAAGCCCATCCCCTCCAAATGTaGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCCTC +
Preference number: 1 (lower is better)
Translates to: LRDEVASSKAHPLQM*LHPLPGCKSHLIFL
Trigger: GAGGAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGAGGGGATGGGCTTTACTTGATGCAACCTCATCTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
3UTR CCA 90 bp AGAAACAGGGGAATTGATACCATTCCTGGGCAGCGCCAAACAGCCTaGGCTGGAAATGCAGCTGAGGACAGAATGATATTCACAAACACG +
Preference number: 1 (lower is better)
Translates to: RNRGIDTIPGQRQTA*AGNAAEDRMIFTNT
Trigger: CGTGTTTGTGAATATCATTCTGTCCTCAGCTGCATTTCCAGCCCAGGCTGTTTGGCGCTGCCCAGGAATGGTATCAATTCCCCTGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR TCA 90 bp TCATCAACCCTGAGTAGTAGGGTCTATCGACACGCATGTTACAGATaGGGGTACGAAGACACAGAGAGGTTGAGGAACTTGCCCAAGGTT +
Preference number: 1 (lower is better)
Translates to: SSTLSSRVYRHACYR*GYEDTERLRNLPKV
Trigger: AACCTTGGGCAAGTTCCTCAACCTCTCTGTGTCTTCGTACCCTCATCTGTAACATGCGTGTCGATAGACCCTACTACTCAGGGTTGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR TCA 90 bp ATGAAACCATCCATCCCCACCCTGACTTGCTTTGAGAATTTCATCTaGAAACATCAACCCCGTGCCTTAACTCTCAACAACCACCGAGGA +
Preference number: 1 (lower is better)
Translates to: MKPSIPTLTCFENFI*KHQPRALTLNNHRG
Trigger: TCCTCGGTGGTTGTTGAGAGTTAAGGCACGGGGTTGATGTTTTCAGATGAAATTCTCAAAGCAAGTCAGGGTGGGGATGGATGGTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431533.6
ENST00000558752.1
3UTR GCA 90 bp TTCATCAAGCATCTCATTATATGCTGGTGTGCTAGACAAACCCCTTaGCCACCAGCACAAGACAAACATGAGACAGATAAACCTGCCAGC +
Preference number: 1 (lower is better)
Translates to: FIKHLIICWCARQTP*PPAQDKHETDKPAS
Trigger: GCTGGCAGGTTTATCTGTCTCATGTTTGTCTTGTGCTGGTGGGCAAGGGGTTTGTCTAGCACACCAGCATATAATGAGATGCTTGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CCA 90 bp CACCAGGCATTACTGCACATGGATCTGGCATGTCTTCCAGGTGCTTaGGAAACACGAGCATTAGTTTGTGTACAAATTAGTCATAGGCAT +
Preference number: 1 (lower is better)
Translates to: HQALLHMDLACLPGA*ETRALVCVQISHRH
Trigger: ATGCCTATGACTAATTTGTACACAAACTAATGCTCGTGTTTCCCAAGCACCTGGAAGACATGCCAGATCCATGTGCAGTAATGCCTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CCA 90 bp TTATACATTCAATATGCACCATTCATCAAGCATCTCATTATATGCTaGTGTGCTAGACAAACCCCTTGCCCACCAGCACAAGACAAACAT +
Preference number: 1 (lower is better)
Translates to: LYIQYAPFIKHLIIC*CARQTPCPPAQDKH
Trigger: ATGTTTGTCTTGTGCTGGTGGGCAAGGGGTTTGTCTAGCACACCAGCATATAATGAGATGCTTGATGAATGGTGCATATTGAATGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR-3UTR CCA 90 bp GCCTCAGTCCCGAGTCTCTGCTGCTGTGGGGAGTCTGGAGTCCCCAGCGCTCTGAGGGATGGGGACACCTaGAGGACGGGAGTAGGGGGA +
Preference number: 2 (lower is better)
Translates to: ASVPSLCCCGESGVPSALRDGDT*RTGVGG
Trigger: TCCCCCTACTCCCGTCCTCCAGGTGTCCCCATCCCT...CAGAGCGCTGGGGACTCCAGACTCCCCACAGCAGCAGAGACTCGGGACTGAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CAA 90 bp GCTGTGGGGAGTCTGGAGTCCCCAGCGCTCTGCACAACTTTGGGCTaGGCAGCCTTCCAGGGTGCGCCCTACGCTCACTCACCATGCAGC +
Preference number: 2 (lower is better)
Translates to: AVGSLESPALCTTLG*AAFQGAPYAHSPCS
Trigger: GCTGCATGGTGAGTGAGCGTAGGGCGCACCCTGGAAGGCTGCCAAGCCCAAAGTTGTGCAGAGCGCTGGGGACTCCAGACTCCCCACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR-3UTR TCA 90 bp GCCTCAGTCCCGAGTCTCTGCTGCTGTGGGGAGTCTGGAGTCCCCAGCGCTCTGCCTCTACTCAACCTCTaGGGAGCTGGGACCACAGGC +
Preference number: 2 (lower is better)
Translates to: ASVPSLCCCGESGVPSALPLLNL*GAGTTG
Trigger: GCCTGTGGTCCCAGCTCCTCAGAGGTTGAGTAGAGG...CAGAGCGCTGGGGACTCCAGACTCCCCACAGCAGCAGAGACTCGGGACTGAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CAA 90 bp TCTGCTGCTGTGGGGAGTCTGGAGTCCCCAGCGCTCTGCACAACTTaGGGCTTGGCAGCCTTCCAGGGTGCGCCCTACGCTCACTCACCA +
Preference number: 2 (lower is better)
Translates to: SAAVGSLESPALCTT*GLAAFQGAPYAHSP
Trigger: TGGTGAGTGAGCGTAGGGCGCACCCTGGAAGGCTGCCAAGCCCAAAGTTGTGCAGAGCGCTGGGGACTCCAGACTCCCCACAGCAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR-3UTR GCA 90 bp GAGCTGCCCAAGTCCCCACAGCTGGGCATAACTGGCAGAGCTGGGACTGGAACCCAAGTCCCCAAACCGTaGTACAGCACCAGGGCCCAG +
Preference number: 2 (lower is better)
Translates to: ELPKSPQLGITGRAGTGTQVPKP*YSTRAQ
Trigger: CTGGGCCCTGGTGCTGTAGCACGGTTTGGGGACTTG...GGTTCCAGTCCCAGCTCTGCCAGTTATGCCCAGCTGTGGGGACTTGGGCAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR-3UTR CCA 90 bp AGGGAGCAGAGTCCTTCTTTGAATCGGGTACCCCAGGATGGCAGGAACCAGGGGGAGACAGGGGAGGGATaGGGACACCTGGAGGACGGG +
Preference number: 2 (lower is better)
Translates to: REQSPSLNRVPQDGRNQGETGEG*GHLEDG
Trigger: CCCGTCCTCCAGGTGTCCCCATCCCTCCCCTGTCTC...CCCCTGGTTCCTGCCATCCTGGGGTACCCGATTCAAAGAAGGACTCTGCTCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR-3UTR GCA 90 bp TTTGGGCTTGGCAGCCTTCCAGGGTGCGCCCTACGCTCACTCACCATGCAGCTAAGGCTGCTCAATGCCTaGTGGCTGTACCCTGGGGCT +
Preference number: 2 (lower is better)
Translates to: FGLGSLPGCALRSLTMQLRLLNA*WLYPGA
Trigger: AGCCCCAGGGTACAGCCAGCAGGCATTGAGCAGCCT...TAGCTGCATGGTGAGTGAGCGTAGGGCGCACCCTGGAAGGCTGCCAAGCCCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR-3UTR GCA 90 bp ACCCCAGGCCCATCCCCACAGCAGTGGTTCAACATCAGCTTGGCTGAGAGGCCCAACGGGGTCCCCAAGTaGCAAGCAATTGGCTGCTCC +
Preference number: 2 (lower is better)
Translates to: TPGPSPQQWFNISLAERPNGVPK*QAIGCS
Trigger: GGAGCAGCCAATTGCTTGGCACTTGGGGACCCCGTT...GGGCCTCTCAGCCAAGCTGATGTTGAACCACTGCTGTGGGGATGGGCCTGGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000428193.6
3UTR-3UTR TCA 90 bp CAGGGTGCGCCCTACGCTCACTCACCATGCAGCTACTGGACTAAGAGCTGGAGATGGAGCAGACAGGACTaGGGTCGGAAGGGCAGTGGT +
Preference number: 2 (lower is better)
Translates to: QGAPYAHSPCSYWTKSWRWSRQD*GRKGSG
Trigger: ACCACTGCCCTTCCGACCTCAGTCCTGTCTGCTCCA...TCTCCAGCTCTTAGTCCAGTAGCTGCATGGTGAGTGAGCGTAGGGCGCACCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR-3UTR GCA 90 bp GGCCCATCCCCACAGCAGTGGTTCAACATCAGCTTGGCTGAGAGGCCCAGCCTCTGCCAAGCAATTGGCTaGTCCCTGGACTACGTGTCC +
Preference number: 2 (lower is better)
Translates to: GPSPQQWFNISLAERPSLCQAIG*SLDYVS
Trigger: GGACACGTAGTCCAGGGAGCAGCCAATTGCTTGGCA...GAGGCTGGGCCTCTCAGCCAAGCTGATGTTGAACCACTGCTGTGGGGATGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428193.6
3UTR-3UTR TCA 90 bp ACACACAGGGCCAGAGCTCCCCAGAGCGTTTCAAAAAGGGAGGCCCAGTCGAGGCCCAGTCGAGGCAGGTaGGAAAGCCAGCTGACTTTA +
Preference number: 2 (lower is better)
Translates to: THRARAPQSVSKREAQSRPSRGR*ESQLTL
Trigger: TAAAGTCAGCTGGCTTTCTCACCTGCCTCGACTGGG...CCTCGACTGGGCCTCCCTTTTTGAAACGCTCTGGGGAGCTCTGGCCCTGTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
3UTR-3UTR TCA 90 bp CAGCAGAGCCCTGACCCAGTAGATGCCAGCATGTCCTGTGAACAGAGGATGCCTGGCAAGTCGAGGCCCTaGCAGTCCCCTTACTCTCAG +
Preference number: 2 (lower is better)
Translates to: QQSPDPVDASMSCEQRMPGKSRP*QSPYSQ
Trigger: CTGAGAGTAAGGGGACTGTCAGGGCCTCGACTTGCC...AGGCATCCTCTGTTCACAGGACATGCTGGCATCTACTGGGTCAGGGCTCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR-3UTR TCA 90 bp GGGAGGTTCTTTCAGCACTCTGGATGTGTCCCCACTGCCTGGGCCTGGTTTCTGAGTGAGCTCTCCTTATaGAGGCGGAGTCCCAGCGCA +
Preference number: 2 (lower is better)
Translates to: GRFFQHSGCVPTAWAWFLSELSL*RRSPSA
Trigger: TGCGCTGGGACTCCGCCTTCATAAGGAGAGCTCACT...CAGAAACCAGGCCCAGGCAGTGGGGACACATCCAGAGTGCTGAAAGAACCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR-3UTR TCA 90 bp GAGCTGCCCAAGTCCCCACAGCTGGGCATAACTGGCAGAGCTGGGACTGGAACCGTTTGCTCAGCACACTaGGGACTCCAAACTCTGTGG +
Preference number: 2 (lower is better)
Translates to: ELPKSPQLGITGRAGTGTVCSAH*GLQTLW
Trigger: CCACAGAGTTTGGAGTCCTCAGTGTGCTGAGCAAAC...GGTTCCAGTCCCAGCTCTGCCAGTTATGCCCAGCTGTGGGGACTTGGGCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR-3UTR CCA 90 bp AGCTTGTGGGCTGCAAATCAGTGCTGTGGAGGACAACTGAAGCAGGTGCCAGGGCCCACCCCTCCTGCATaGCCAGCCATTGACATCACC +
Preference number: 2 (lower is better)
Translates to: SLWAANQCCGGQLKQVPGPTPPA*PAIDIT
Trigger: GGTGATGTCAATGGCTGGCCATGCAGGAGGGGTGGG...CCCTGGCACCTGCTTCAGTTGTCCTCCACAGCACTGATTTGCAGCCCACAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR-3UTR GCA 90 bp CCAGGGGTGCCATGGATGCTGGATCCTTGGTCCCTGGCAGTGGCTGACAGAGTTCTGAATGGAAGCCACTaGCCCAGCTGGGATTCTTCA +
Preference number: 2 (lower is better)
Translates to: PGVPWMLDPWSLAVADRVLNGSH*PSWDSS
Trigger: TGAAGAATCCCAGCTGGGGCAGTGGCTTCCATTCAG...AACTCTGTCAGCCACTGCCAGGGACCAAGGATCCAGCATCCATGGCACCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR-3UTR TCA 90 bp ACACACAGGGCCAGAGCTCCCCAGAGCGTTTCAAAAAGGGAGGCCCAGTCGAGGTTTGATGACATGGCCTaGATGACAACACACAGGGCC +
Preference number: 2 (lower is better)
Translates to: THRARAPQSVSKREAQSRFDDMA*MTTHRA
Trigger: GGCCCTGTGTGTTGTCATTCAGGCCATGTCATCAAA...CCTCGACTGGGCCTCCCTTTTTGAAACGCTCTGGGGAGCTCTGGCCCTGTGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
3UTR-3UTR TCA 90 bp CCACTGCCCCAGCTGGGATTCTTCAGGCCACCTCACAATGGGACAGTAGGTCTCAGGCCTTTCTTCTTCTaGATGGAAGCCACTGCCCCA +
Preference number: 2 (lower is better)
Translates to: PLPQLGFFRPPHNGTVGLRPFFF*MEATAP
Trigger: TGGGGCAGTGGCTTCCATTCAGAAGAAGAAAGGCCT...GAGACCTACTGTCCCATTGTGAGGTGGCCTGAAGAATCCCAGCTGGGGCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
3UTR-3UTR TCA 90 bp GATGAGGTTGCATCAAGTAAAGCCCATCCCCTCCAAATGTGGCTGCACCCACTCCTCATCTTCCTCCCGTaGTGTCTGTCGTCCCCCAGG +
Preference number: 2 (lower is better)
Translates to: DEVASSKAHPLQMWLHPLLIFLP*CLSSPR
Trigger: CCTGGGGGACGACAGACATCACGGGAGGAAGATGAG...GAGTGGGTGCAGCCACATTTGGAGGGGATGGGCTTTACTTGATGCAACCTCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
3UTR-3UTR TCA 90 bp CAGGGTGCGCCCTACGCTCACTCACCATGCAGCTACTGGACTAAGAGCTGGAGACCTTATGCAGGGCTGTaGAAGGCACTCAAAATGGCC +
Preference number: 2 (lower is better)
Translates to: QGAPYAHSPCSYWTKSWRPYAGL*KALKMA
Trigger: GGCCATTTTGAGTGCCTTTCACAGCCCTGCATAAGG...TCTCCAGCTCTTAGTCCAGTAGCTGCATGGTGAGTGAGCGTAGGGCGCACCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR-3UTR CCA 90 bp GGGAGGTTCTTTCAGCACTCTGGATGTGTCCCCACTGCCTGGGCCTGGTTTCTGCAGCCTGCACCCTTCTaGGCTAGAAAAGGCCTTTCT +
Preference number: 2 (lower is better)
Translates to: GRFFQHSGCVPTAWAWFLQPAPF*ARKGLS
Trigger: AGAAAGGCCTTTTCTAGCCCAGAAGGGTGCAGGCTG...CAGAAACCAGGCCCAGGCAGTGGGGACACATCCAGAGTGCTGAAAGAACCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR-3UTR CCA 90 bp GCATGTCCTGTGAACAGAGGATGCCTCAGTCCCGAGTCTCTGCTGCTGTGGGGAAGAGGCCCACTAAGCTaGGCTGTGTTACGGATGAGA +
Preference number: 2 (lower is better)
Translates to: ACPVNRGCLSPESLLLWGRGPLS*AVLRMR
Trigger: TCTCATCCGTAACACAGCCCAGCTTAGTGGGCCTCT...TCCCCACAGCAGCAGAGACTCGGGACTGAGGCATCCTCTGTTCACAGGACATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR-3UTR TCA 90 bp TCCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCCTCCCTCATCTTCCTCCCGTaGTGTCTGTCGTCCCCCAGG +
Preference number: 2 (lower is better)
Translates to: SKCGCTHSLDAKVISSSSLIFLP*CLSSPR
Trigger: CCTGGGGGACGACAGACATCACGGGAGGAAGATGAG...GGAGGAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
3UTR-3UTR TCA 90 bp CATTACTGCACATGGATCTGGCATGTCTTCCAGGTGCTTGGGAAACACGAGCATGGGCTGTGTTACGGATaGGACCAGGGGAGGCCACAC +
Preference number: 2 (lower is better)
Translates to: HYCTWIWHVFQVLGKHEHGLCYG*DQGRPH
Trigger: GTGTGGCCTCCCCTGGTCTCATCCGTAACACAGCCC...ATGCTCGTGTTTCCCAAGCACCTGGAAGACATGCCAGATCCATGTGCAGTAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR-3UTR GCA 90 bp TACACAGGCAAAATGGGAATCAAATGGCTGCAACCAACCCAGCCTGTCCCCTCCGCCCCTCCCCTGTTGTaGCTCAATCTTCCCACCTGT +
Preference number: 2 (lower is better)
Translates to: YTGKMGIKWLQPTQPVPSAPPLL*LNLPTC
Trigger: ACAGGTGGGAAGATTGAGGCACAACAGGGGAGGGGC...GGAGGGGACAGGCTGGGTTGGTTGCAGCCATTTGATTCCCATTTTGCCTGTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000558752.1
3UTR CAA 90 bp CGTGTCCCTGAGACAGGAGGATCACTAGCCAACAGACTGCGTTTGTaGCTGCCACTGAGTAAAAGGACCCTTGGCTCTGAGGCAGTTCCA +
Preference number: 2 (lower is better)
Translates to: RVPETGGSLANRLRL*LPLSKRTLGSEAVP
Trigger: TGGAACTGCCTCAGAGCCAAGGGTCCTTTTACTCAGTGGCAGCAACAAACGCAGTCTGTTGGCTAGTGATCCTCCTGTCTCAGGGACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428193.6
3UTR-3UTR GCA 90 bp TCCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCCTCCGAAGACAGTGACCCTTaGCCTCACCAGGGACAAGGC +
Preference number: 2 (lower is better)
Translates to: SKCGCTHSLDAKVISSSSEDSDP*PHQGQG
Trigger: GCCTTGTCCCTGGTGAGGGCAAGGGTCACTGTCTTC...GGAGGAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
3UTR-3UTR GCA 90 bp CCCCAGCTGGGATTCTTCAGGCCACCTCACAATGGGACAGTAGGTCTCAATCACCTGAATGGAAGCCACTaGCCCAGCTGGGATTCTTCA +
Preference number: 2 (lower is better)
Translates to: PQLGFFRPPHNGTVGLNHLNGSH*PSWDSS
Trigger: TGAAGAATCCCAGCTGGGGCAGTGGCTTCCATTCAG...GTGATTGAGACCTACTGTCCCATTGTGAGGTGGCCTGAAGAATCCCAGCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
3UTR-3UTR CCA 90 bp CTGGTTCCTCCACCCCAACCCACCGATAGCATTCAGATACCAGACGTGGCCTCCTGCAAATCAGTGCTGTaGAGGACAACTGAAGCAGGT +
Preference number: 2 (lower is better)
Translates to: LVPPPQPTDSIQIPDVASCKSVL*RTTEAG
Trigger: ACCTGCTTCAGTTGTCCTCCACAGCACTGATTTGCA...GGAGGCCACGTCTGGTATCTGAATGCTATCGGTGGGTTGGGGTGGAGGAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR-3UTR CCA 90 bp TGTCCTGTGAACAGAGGATGCCTCAGTCCCGAGTCTCTGCTGCTGTGGGGAGTCTCTAGAGGAGGGAAATaGTGTCTCCACGTTTGCTCA +
Preference number: 2 (lower is better)
Translates to: CPVNRGCLSPESLLLWGVSRGGK*CLHVCS
Trigger: TGAGCAAACGTGGAGACACCATTTCCCTCCTCTAGA...GACTCCCCACAGCAGCAGAGACTCGGGACTGAGGCATCCTCTGTTCACAGGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR-3UTR CCA 90 bp CATTACTGCACATGGATCTGGCATGTCTTCCAGGTGCTTGGGAAACACGAGCATGAGTCTCTGCTGCTGTaGGGAGTCTGGAGTCCCCAG +
Preference number: 2 (lower is better)
Translates to: HYCTWIWHVFQVLGKHEHESLLL*GVWSPQ
Trigger: CTGGGGACTCCAGACTCCCCACAGCAGCAGAGACTC...ATGCTCGTGTTTCCCAAGCACCTGGAAGACATGCCAGATCCATGTGCAGTAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CAA 90 bp TGGGGCTGCCATCTCCCTTACAGTTATAAGCCACCACCCACCAAGTaGCCCATCTCAGAGATGAGGTTGCATCAAGTAAAGCCCATCCCC +
Preference number: 2 (lower is better)
Translates to: WGCHLPYSYKPPPTK*PISEMRLHQVKPIP
Trigger: GGGGATGGGCTTTACTTGATGCAACCTCATCTCTGAGATGGGCAACTTGGTGGGTGGTGGCTTATAACTGTAAGGGAGATGGCAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CAA 90 bp CTACGTGTCCCTGAGACAGGAGGATCACTAGCCAACAGACTGCGTTaGTTGCTGCCACTGAGTAAAAGGACCCTTGGCTCTGAGGCAGTT +
Preference number: 2 (lower is better)
Translates to: LRVPETGGSLANRLR*LLPLSKRTLGSEAV
Trigger: AACTGCCTCAGAGCCAAGGGTCCTTTTACTCAGTGGCAGCAACAAACGCAGTCTGTTGGCTAGTGATCCTCCTGTCTCAGGGACACGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428193.6
3UTR-3UTR TCA 90 bp CCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCCTCCCAGGCCTTTCTTCTTCTaGATGGAAGCCACTGCCCCA +
Preference number: 2 (lower is better)
Translates to: PNVAAPTPWMQKSSHLPPRPFFF*MEATAP
Trigger: TGGGGCAGTGGCTTCCATTCAGAAGAAGAAAGGCCT...GGGAGGAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
3UTR-3UTR TCA 90 bp CACATGGATCTGGCATGTCTTCCAGGTGCTTGGGAAACACGAGCATTAGTTTGTAGGTGGAGGCTGCAGTaGGCCAAGATCGCGCCATTG +
Preference number: 2 (lower is better)
Translates to: HMDLACLPGAWETRALVCRWRLQ*AKIAPL
Trigger: CAATGGCGCGATCTTGGCTCACTGCAGCCTCCACCT...ACAAACTAATGCTCGTGTTTCCCAAGCACCTGGAAGACATGCCAGATCCATGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR-3UTR CCA 90 bp TTTCATCTGAAAACATCAACCCCGTGCCTTAACTCTCAACAACCACCGAGGAAGGGATGCCCGCCGCGATaGCAGTTACCGCTCTTCCTG +
Preference number: 2 (lower is better)
Translates to: FHLKTSTPCLNSQQPPRKGCPPR*QLPLFL
Trigger: CAGGAAGAGCGGTAACTGCCATCGCGGCGGGCATCC...CTTCCTCGGTGGTTGTTGAGAGTTAAGGCACGGGGTTGATGTTTTCAGATGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431533.6
3UTR CAA 90 bp AGTTATAAGCCACCACCCACCAAGTTGCCCATCTCAGAGATGAGGTaGCATCAAGTAAAGCCCATCCCCTCCAAATGTGGCTGCACCCAC +
Preference number: 2 (lower is better)
Translates to: SYKPPPTKLPISEMR*HQVKPIPSKCGCTH
Trigger: GTGGGTGCAGCCACATTTGGAGGGGATGGGCTTTACTTGATGCAACCTCATCTCTGAGATGGGCAACTTGGTGGGTGGTGGCTTATAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CAA 90 bp TGCCCACCAGCACAAGACAAACATGAGACAGATAAACCTGCCAGCTaGTGGGCTGCAAATCAGTGCTGTGGAGGACAACTGAAGCAGGTG +
Preference number: 2 (lower is better)
Translates to: CPPAQDKHETDKPAS*WAANQCCGGQLKQV
Trigger: CACCTGCTTCAGTTGTCCTCCACAGCACTGATTTGCAGCCCACAAGCTGGCAGGTTTATCTGTCTCATGTTTGTCTTGTGCTGGTGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR-3UTR TCA 90 bp TCTTCTGAATGGAAGCCACTGCCCCAGCTGGGATTCTTCAGGCCACCTCACAATTTTGATGACATGGCCTaGATGACAACACACAGGGCC +
Preference number: 2 (lower is better)
Translates to: SSEWKPLPQLGFFRPPHNFDDMA*MTTHRA
Trigger: GGCCCTGTGTGTTGTCATTCAGGCCATGTCATCAAA...ATTGTGAGGTGGCCTGAAGAATCCCAGCTGGGGCAGTGGCTTCCATTCAGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
3UTR-3UTR TCA 90 bp CTAGGAAGGGCCACCCATGTATTCGGCAATCCAAGAGGTGAAAGCTTTCAGGACAAGGACCCTTGGCTCTaGGGCAGTTCCAATCAAGGA +
Preference number: 2 (lower is better)
Translates to: LGRATHVFGNPRGESFQDKDPWL*GSSNQG
Trigger: TCCTTGATTGGAACTGCCTCAGAGCCAAGGGTCCTT...GTCCTGAAAGCTTTCACCTCTTGGATTGCCGAATACATGGGTGGCCCTTCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428193.6
3UTR-3UTR CCA 90 bp CCCTCCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCCCAGGCCACCTCACAATaGGACAGTAGGTCTCAATCA +
Preference number: 2 (lower is better)
Translates to: PSKCGCTHSLDAKVISSSQATSQ*DSRSQS
Trigger: TGATTGAGACCTACTGTCCCATTGTGAGGTGGCCTG...GGAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
3UTR-3UTR CCA 90 bp CCCTCCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCCCTTTCTTCTTCTGAATaGAAGCCACTGCCCCAGCTG +
Preference number: 2 (lower is better)
Translates to: PSKCGCTHSLDAKVISSSLSSSE*KPLPQL
Trigger: CAGCTGGGGCAGTGGCTTCCATTCAGAAGAAGAAAG...GGAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
3UTR-3UTR TCA 90 bp CTAGGAAGGGCCACCCATGTATTCGGCAATCCAAGAGGTGAAAGCTTTCAGGACGTTTGTTGCTGCCACTaGGTAAAAGGACCCTTGGCT +
Preference number: 2 (lower is better)
Translates to: LGRATHVFGNPRGESFQDVCCCH*VKGPLA
Trigger: AGCCAAGGGTCCTTTTACTCAGTGGCAGCAACAAAC...GTCCTGAAAGCTTTCACCTCTTGGATTGCCGAATACATGGGTGGCCCTTCCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428193.6
3UTR-3UTR GCA 90 bp CACATGGATCTGGCATGTCTTCCAGGTGCTTGGGAAACACGAGCATTAGTTTGTGCAAGTGGTCAGATCTaGTCTCCTTCGAGCTGGGCA +
Preference number: 2 (lower is better)
Translates to: HMDLACLPGAWETRALVCASGQI*SPSSWA
Trigger: TGCCCAGCTCGAAGGAGAGCAGATCTGACCACTTGC...ACAAACTAATGCTCGTGTTTCCCAAGCACCTGGAAGACATGCCAGATCCATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR-3UTR GCA 90 bp CACGAACATTCAGGGAATCCCCAAAAAGGCCTGCACCTGACAGCACAATGTATGTGGGAATCAAATGGCTaGAACCAACCCAGCCTGTCC +
Preference number: 2 (lower is better)
Translates to: HEHSGNPQKGLHLTAQCMWESNG*NQPSLS
Trigger: GGACAGGCTGGGTTGGTTGCAGCCATTTGATTCCCA...CATACATTGTGCTGTCAGGTGCAGGCCTTTTTGGGGATTCCCTGAATGTTCGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558752.1
3UTR-3UTR CCA 90 bp CTCCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCCTCCAGGCCACCTCACAATaGGACAGTAGGTCTCAATCA +
Preference number: 2 (lower is better)
Translates to: LQMWLHPLPGCKSHLIFLQATSQ*DSRSQS
Trigger: TGATTGAGACCTACTGTCCCATTGTGAGGTGGCCTG...GAGGAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
3UTR-3UTR CCA 90 bp CACATGGATCTGGCATGTCTTCCAGGTGCTTGGGAAACACGAGCATTAGTTTGTACAGCAGACAGGGGCTaGCAAGTGGTCAGATCTGCT +
Preference number: 2 (lower is better)
Translates to: HMDLACLPGAWETRALVCTADRG*QVVRSA
Trigger: AGCAGATCTGACCACTTGCCAGCCCCTGTCTGCTGT...ACAAACTAATGCTCGTGTTTCCCAAGCACCTGGAAGACATGCCAGATCCATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR-3UTR GCA 90 bp CCACCTCACAATGGGACAGTAGGTCTCAATCACAAGTCAGCAAACTTTTTCTGTGAAGACAGTGACCCTTaGCCTCACCAGGGACAAGGC +
Preference number: 2 (lower is better)
Translates to: PPHNGTVGLNHKSANFFCEDSDP*PHQGQG
Trigger: GCCTTGTCCCTGGTGAGGGCAAGGGTCACTGTCTTC...ACAGAAAAAGTTTGCTGACTTGTGATTGAGACCTACTGTCCCATTGTGAGGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
3UTR-3UTR CCA 90 bp CAGCAGAGCCCTGACCCAGTAGATGCCAGCATGTCCTGTGAACAGAGGATGCCTAACTCTCAGGACCGGTaGGCTTTATACATTCAATAT +
Preference number: 2 (lower is better)
Translates to: QQSPDPVDASMSCEQRMPNSQDR*ALYIQY
Trigger: ATATTGAATGTATAAAGCCCACCGGTCCTGAGAGTT...AGGCATCCTCTGTTCACAGGACATGCTGGCATCTACTGGGTCAGGGCTCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR-3UTR CCA 90 bp AATCTTCCCACCTGTGGGATGAAACCATCCATCCCCACCCTGACTTGCTTTGAGCCTACACAGGCAAAATaGGAATCAAATGGCTGCAAC +
Preference number: 2 (lower is better)
Translates to: NLPTCGMKPSIPTLTCFEPTQAK*ESNGCN
Trigger: GTTGCAGCCATTTGATTCCCATTTTGCCTGTGTAGG...CTCAAAGCAAGTCAGGGTGGGGATGGATGGTTTCATCCCACAGGTGGGAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558752.1
3UTR-3UTR CCA 90 bp CACGAACATTCAGGGAATCCCCAAAAAGGCCTGCACCTGACAGCACAATGTATGAAAATGGGAATCAAATaGCTGCAACCAACCCAGCCT +
Preference number: 2 (lower is better)
Translates to: HEHSGNPQKGLHLTAQCMKMGIK*LQPTQP
Trigger: AGGCTGGGTTGGTTGCAGCCATTTGATTCCCATTTT...CATACATTGTGCTGTCAGGTGCAGGCCTTTTTGGGGATTCCCTGAATGTTCGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558752.1
3UTR CCA 72 bp CGGCCGAGAGGGAAGCCGGTACCCAGACCAACACCCTaGCGCCAGGGATGCCCGCCGCGATGGCAGTTACCG +
Preference number: 3 (lower is better)
Translates to: RPRGKPVPRPTP*RQGCPPRWQLP
Trigger: CGGTAACTGCCATCGCGGCGGGCATCCCTGGCGCCAGGGTGTTGGTCTGGGTACCGGCTTCCCTCTCGGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431533.6
3UTR GCA 72 bp AAGCCGGTACCCAGACCAACACCCTGGCGCCAGGGATaGCCGCCGCGATGGCAGTTACCGCTCTTCCTGCCT +
Preference number: 3 (lower is better)
Translates to: KPVPRPTPWRQG*PPRWQLPLFLP
Trigger: AGGCAGGAAGAGCGGTAACTGCCATCGCGGCGGGCATCCCTGGCGCCAGGGTGTTGGTCTGGGTACCGGCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431533.6
3UTR CCA 72 bp TGGGGAGTCTGGAGTCCCCAGCGCTCTGCACAACTTTaGGCTTGGCAGCCTTCCAGGGTGCGCCCTACGCTC +
Preference number: 3 (lower is better)
Translates to: WGVWSPQRSAQL*AWQPSRVRPTL
Trigger: GAGCGTAGGGCGCACCCTGGAAGGCTGCCAAGCCCAAAGTTGTGCAGAGCGCTGGGGACTCCAGACTCCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CCA 72 bp TCGGGTACCCCAGGATGGCAGGAACCAGGGGTGCCATaGATGCTGGATCCTTGGTCCCTGGCAGTGGCTGAC +
Preference number: 3 (lower is better)
Translates to: SGTPGWQEPGVP*MLDPWSLAVAD
Trigger: GTCAGCCACTGCCAGGGACCAAGGATCCAGCATCCATGGCACCCCTGGTTCCTGCCATCCTGGGGTACCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CCA 72 bp AGGCTGGCCACCCGCAGGAACAGAGGCCCACTAAGCTaGGCTGTGTTACGGATGAGACCAGGGGAGGCCACA +
Preference number: 3 (lower is better)
Translates to: RLATRRNRGPLS*AVLRMRPGEAT
Trigger: TGTGGCCTCCCCTGGTCTCATCCGTAACACAGCCCAGCTTAGTGGGCCTCTGTTCCTGCGGGTGGCCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CCA 72 bp GTCTGGAGTCCCCAGCGCTCTGCACAACTTTGGGCTTaGCAGCCTTCCAGGGTGCGCCCTACGCTCACTCAC +
Preference number: 3 (lower is better)
Translates to: VWSPQRSAQLWA*QPSRVRPTLTH
Trigger: GTGAGTGAGCGTAGGGCGCACCCTGGAAGGCTGCCAAGCCCAAAGTTGTGCAGAGCGCTGGGGACTCCAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR GCA 72 bp GTACCCCAGGATGGCAGGAACCAGGGGTGCCATGGATaGTGGATCCTTGGTCCCTGGCAGTGGCTGACAGAG +
Preference number: 3 (lower is better)
Translates to: VPQDGRNQGCHG*WILGPWQWLTE
Trigger: CTCTGTCAGCCACTGCCAGGGACCAAGGATCCAGCATCCATGGCACCCCTGGTTCCTGCCATCCTGGGGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CCA 72 bp TGCCTCAGTCCCGAGTCTCTGCTGCTGTGGGGAGTCTaGAGTCCCCAGCGCTCTGCACAACTTTGGGCTTGG +
Preference number: 3 (lower is better)
Translates to: CLSPESLLLWGV*SPQRSAQLWAW
Trigger: CCAAGCCCAAAGTTGTGCAGAGCGCTGGGGACTCCAGACTCCCCACAGCAGCAGAGACTCGGGACTGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR-3UTR CAA 90 bp AGCTTGTGGGCTGCAAATCAGTGCTGTGGAGGACAACTGAAGCAGGTGCCAGGGGTCGTCCCCCAGGTCTaGGGAACACCCCAAGTCCCC +
Preference number: 3 (lower is better)
Translates to: SLWAANQCCGGQLKQVPGVVPQV*GTPQVP
Trigger: GGGGACTTGGGGTGTTCCCAAGACCTGGGGGACGAC...CCCTGGCACCTGCTTCAGTTGTCCTCCACAGCACTGATTTGCAGCCCACAAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR GCA 72 bp TTGAATCGGGTACCCCAGGATGGCAGGAACCAGGGGTaGCATGGATGCTGGATCCTTGGTCCCTGGCAGTGG +
Preference number: 3 (lower is better)
Translates to: LNRVPQDGRNQG*HGCWILGPWQW
Trigger: CCACTGCCAGGGACCAAGGATCCAGCATCCATGGCACCCCTGGTTCCTGCCATCCTGGGGTACCCGATTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR-3UTR CAA 90 bp CTGGTTCCTCCACCCCAACCCACCGATAGCATTCAGATACCAGACGTGGCCTCCGGCAATCAGGAAAGCTaGGGTGACAGGGTGGCCCAG +
Preference number: 3 (lower is better)
Translates to: LVPPPQPTDSIQIPDVASGNQES*GDRVAQ
Trigger: CTGGGCCACCCTGTCACCCAAGCTTTCCTGATTGCC...GGAGGCCACGTCTGGTATCTGAATGCTATCGGTGGGTTGGGGTGGAGGAACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR TCA 72 bp GGTGGCCCAGGAGCGGCCACTGAGATGAGACCTAAGTaGCAAGAGCCAGCTCAAAGAGACAGGGGAGGGATG +
Preference number: 3 (lower is better)
Translates to: GGPGAATEMRPK*QEPAQRDRGGM
Trigger: CATCCCTCCCCTGTCTCTTTGAGCTGGCTCTTGTCACTTAGGTCTCATCTCAGTGGCCGCTCCTGGGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR TCA 72 bp GGAAACAAGAGGGCTGGGCAATCAGGAAAGCTTGGGTaGCAGGGTGGCCCAGGAGCGGCCACTGAGATGAGA +
Preference number: 3 (lower is better)
Translates to: GNKRAGQSGKLG*QGGPGAATEMR
Trigger: TCTCATCTCAGTGGCCGCTCCTGGGCCACCCTGTCACCCAAGCTTTCCTGATTGCCCAGCCCTCTTGTTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR TCA 72 bp CTCCTTCGAGCTGGGCAAGACTGGAGCAGACAGGACTaGGGTCGGAAGGGCAGTGGTCTGCCTCAAAACGCA +
Preference number: 3 (lower is better)
Translates to: LLRAGQDWSRQD*GRKGSGLPQNA
Trigger: TGCGTTTTGAGGCAGACCACTGCCCTTCCGACCTCAGTCCTGTCTGCTCCAGTCTTGCCCAGCTCGAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR TCA 72 bp GGGCCATCTACTAACGTGAGCAGTGAGCTCTCCTTATaGAGGCGGAGTCCCAGCGCAGTGAGGCCAGCCAGA +
Preference number: 3 (lower is better)
Translates to: GPSTNVSSELSL*RRSPSAVRPAR
Trigger: TCTGGCTGGCCTCACTGCGCTGGGACTCCGCCTTCATAAGGAGAGCTCACTGCTCACGTTAGTAGATGGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR GCA 72 bp GGGAGTAGGGGGACAATGCTAAGGCTGCTCAATGCCTaGTGGCTGTACCCTGGGGCTGCCATCTCCCTTACA +
Preference number: 3 (lower is better)
Translates to: GSRGTMLRLLNA*WLYPGAAISLT
Trigger: TGTAAGGGAGATGGCAGCCCCAGGGTACAGCCAGCAGGCATTGAGCAGCCTTAGCATTGTCCCCCTACTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR GCA 72 bp GCAGCCTTCCAGGGTGCGCCCTACGCTCACTCACCATaGAGCTACTGGACTAAGAGCTGGAGAGACAGCAGT +
Preference number: 3 (lower is better)
Translates to: AAFQGAPYAHSP*SYWTKSWRDSS
Trigger: ACTGCTGTCTCTCCAGCTCTTAGTCCAGTAGCTGCATGGTGAGTGAGCGTAGGGCGCACCCTGGAAGGCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CCA 72 bp TCCAGGCCTCACTGTGTGTCATGGTGTCTTCCAGGCTaGAGTGTAGTGGTGGGGCTCATGGGCTCACTGCAG +
Preference number: 3 (lower is better)
Translates to: SRPHCVSWCLPG*SVVVGLMGSLQ
Trigger: CTGCAGTGAGCCCATGAGCCCCACCACTACACTCCAGCCTGGAAGACACCATGACACACAGTGAGGCCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CCA 72 bp AACAGAGGATGCCTCAGTCCCGAGTCTCTGCTGCTGTaGGGAGTCTGGAGTCCCCAGCGCTCTGCACAACTT +
Preference number: 3 (lower is better)
Translates to: NRGCLSPESLLL*GVWSPQRSAQL
Trigger: AAGTTGTGCAGAGCGCTGGGGACTCCAGACTCCCCACAGCAGCAGAGACTCGGGACTGAGGCATCCTCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR-3UTR CAA 90 bp AACAGAGGCCCACTAAGCTGGGCTGTGTTACGGATGAGACCAGGGGAGGCCACATGCAGCCTCATACTCTaGGCTCAAGTGCTCCGCTCA +
Preference number: 3 (lower is better)
Translates to: NRGPLSWAVLRMRPGEATCSLIL*AQVLRS
Trigger: TGAGCGGAGCACTTGAGCCAAGAGTATGAGGCTGCA...TGTGGCCTCCCCTGGTCTCATCCGTAACACAGCCCAGCTTAGTGGGCCTCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR TCA 72 bp GGGAGAGGCCTCACGAGAAGGGGCCATCTACTAACGTaGGCAGTGAGCTCTCCTTATGAAGGCGGAGTCCCA +
Preference number: 3 (lower is better)
Translates to: GRGLTRRGHLLT*AVSSPYEGGVP
Trigger: TGGGACTCCGCCTTCATAAGGAGAGCTCACTGCTCACGTTAGTAGATGGCCCCTTCTCGTGAGGCCTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR GCA 72 bp AAGGCTGCTCAATGCCTGCTGGCTGTACCCTGGGGCTaGCATCTCCCTTACAGTTATAAGCCACCACCCACC +
Preference number: 3 (lower is better)
Translates to: KAAQCLLAVPWG*HLPYSYKPPPT
Trigger: GGTGGGTGGTGGCTTATAACTGTAAGGGAGATGGCAGCCCCAGGGTACAGCCAGCAGGCATTGAGCAGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR GCA 72 bp CTCCTAAGTGTGGTAGCGAGGGCCCCTCCCCTGTTGTaGCTCAATCTTCCCACCTGTGGGATGAAACCATCC +
Preference number: 3 (lower is better)
Translates to: LLSVVARAPPLL*LNLPTCGMKPS
Trigger: GGATGGTTTCATCCCACAGGTGGGAAGATTGAGGCACAACAGGGGAGGGGCCCTCGCTACCACACTTAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558752.1
3UTR CCA 72 bp GGGTGCCATGGATGCTGGATCCTTGGTCCCTGGCAGTaGCTGACAGAGTTAGGTGCCCAGGAAACATGTGAG +
Preference number: 3 (lower is better)
Translates to: GCHGCWILGPWQ*LTELGAQETCE
Trigger: CTCACATGTTTCCTGGGCACCTAACTCTGTCAGCCACTGCCAGGGACCAAGGATCCAGCATCCATGGCACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CCA 72 bp ATGCTGCCGGGCATCACTCTTGGGGATAGGATGACCTaGGGGAGGTTCTTTCAGCACTCTGGATGTGTCCCC +
Preference number: 3 (lower is better)
Translates to: MLPGITLGDRMT*GRFFQHSGCVP
Trigger: GGGGACACATCCAGAGTGCTGAAAGAACCTCCCCCAGGTCATCCTATCCCCAAGAGTGATGCCCGGCAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CCA 72 bp CGGGGCAGACCTGGAGCCACCAGGCATTACTGCACATaGATCTGGCATGTCTTCCAGGTGCTTGGGAAACAC +
Preference number: 3 (lower is better)
Translates to: RGRPGATRHYCT*IWHVFQVLGKH
Trigger: GTGTTTCCCAAGCACCTGGAAGACATGCCAGATCCATGTGCAGTAATGCCTGGTGGCTCCAGGTCTGCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR TCA 72 bp TTGGGTGACAGGGTGGCCCAGGAGCGGCCACTGAGATaGGACCTAAGTGACAAGAGCCAGCTCAAAGAGACA +
Preference number: 3 (lower is better)
Translates to: LGDRVAQERPLR*DLSDKSQLKET
Trigger: TGTCTCTTTGAGCTGGCTCTTGTCACTTAGGTCTCATCTCAGTGGCCGCTCCTGGGCCACCCTGTCACCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR TCA 72 bp TGGGAATGCTGCCGGGCATCACTCTTGGGGATAGGATaGCCTGGGGGAGGTTCTTTCAGCACTCTGGATGTG +
Preference number: 3 (lower is better)
Translates to: WECCRASLLGIG*PGGGSFSTLDV
Trigger: CACATCCAGAGTGCTGAAAGAACCTCCCCCAGGTCATCCTATCCCCAAGAGTGATGCCCGGCAGCATTCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR GCA 72 bp CATGGGCTCACTGCAGCCTCATACTCTTGGCTCAAGTaGTCCGCTCACCTCAGCCTCTACTCAACCTCTGAG +
Preference number: 3 (lower is better)
Translates to: HGLTAASYSWLK*SAHLSLYSTSE
Trigger: CTCAGAGGTTGAGTAGAGGCTGAGGTGAGCGGAGCACTTGAGCCAAGAGTATGAGGCTGCAGTGAGCCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR GCA 72 bp ATTCACAGCAGACAGGGGCTGGCAAGTGGTCAGATCTaGTCTCCTTCGAGCTGGGCAAGACTGGAGCAGACA +
Preference number: 3 (lower is better)
Translates to: IHSRQGLASGQI*SPSSWARLEQT
Trigger: TGTCTGCTCCAGTCTTGCCCAGCTCGAAGGAGAGCAGATCTGACCACTTGCCAGCCCCTGTCTGCTGTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR TCA 72 bp GCAGTGGCTGACAGAGTTAGGTGCCCAGGAAACATGTaGGGATCAACAGCAGGACTCTTTCCCCATCCAGGC +
Preference number: 3 (lower is better)
Translates to: AVADRVRCPGNM*GSTAGLFPHPG
Trigger: GCCTGGATGGGGAAAGAGTCCTGCTGTTGATCCTCACATGTTTCCTGGGCACCTAACTCTGTCAGCCACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR TCA 72 bp TGGGCAGCGCCAAACAGCCTGGGCTGGAAATGCAGCTaGGGACAGAATGATATTCACAAACACGGGCAGGAG +
Preference number: 3 (lower is better)
Translates to: WAAPNSLGWKCS*GQNDIHKHGQE
Trigger: CTCCTGCCCGTGTTTGTGAATATCATTCTGTCCTCAGCTGCATTTCCAGCCCAGGCTGTTTGGCGCTGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CCA 72 bp TTGATTCCTGGCTTCCGTGAACCATTAGCCCTGAGCTaGGAATGCTGCCGGGCATCACTCTTGGGGATAGGA +
Preference number: 3 (lower is better)
Translates to: LIPGFREPLALS*ECCRASLLGIG
Trigger: TCCTATCCCCAAGAGTGATGCCCGGCAGCATTCCCAGCTCAGGGCTAATGGTTCACGGAAGCCAGGAATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR TCA 72 bp GGACAAGGTGACATGCAGAGTTTTGATGACATGGCCTaGATGACAACACACAGGGCCAGAGCTCCCCAGAGC +
Preference number: 3 (lower is better)
Translates to: GQGDMQSFDDMA*MTTHRARAPQS
Trigger: GCTCTGGGGAGCTCTGGCCCTGTGTGTTGTCATTCAGGCCATGTCATCAAAACTCTGCATGTCACCTTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
3UTR CCA 72 bp AGACCTGGAGCCACCAGGCATTACTGCACATGGATCTaGCATGTCTTCCAGGTGCTTGGGAAACACGAGCAT +
Preference number: 3 (lower is better)
Translates to: RPGATRHYCTWI*HVFQVLGKHEH
Trigger: ATGCTCGTGTTTCCCAAGCACCTGGAAGACATGCCAGATCCATGTGCAGTAATGCCTGGTGGCTCCAGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR TCA 72 bp TACTGGACTAAGAGCTGGAGAGACAGCAGTGAACACTaGGACACCTGCCTTATGCAGGGCTGTGAAAGGCAC +
Preference number: 3 (lower is better)
Translates to: YWTKSWRDSSEH*DTCLMQGCERH
Trigger: GTGCCTTTCACAGCCCTGCATAAGGCAGGTGTCTCAGTGTTCACTGCTGTCTCTCCAGCTCTTAGTCCAGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CCA 72 bp GAGGTTGCATCAAGTAAAGCCCATCCCCTCCAAATGTaGCTGCACCCACTCCCTGGATGCAAAAGTCATCTC +
Preference number: 3 (lower is better)
Translates to: EVASSKAHPLQM*LHPLPGCKSHL
Trigger: GAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGAGGGGATGGGCTTTACTTGATGCAACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
3UTR CCA 72 bp TTTCAGCACTCTGGATGTGTCCCCACTGCCTGGGCCTaGTTTCTGATGAGGGCAGCTACTAACTTTATCAGG +
Preference number: 3 (lower is better)
Translates to: FQHSGCVPTAWA*FLMRAATNFIR
Trigger: CCTGATAAAGTTAGTAGCTGCCCTCATCAGAAACCAGGCCCAGGCAGTGGGGACACATCCAGAGTGCTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CCA 72 bp CAAAAAGGCCTGCACCTGACAGCACAATGTATGGAGTaGGGTCCCCAAGACCTCTTCTCTAACCTACACAGG +
Preference number: 3 (lower is better)
Translates to: QKGLHLTAQCME*GPQDLFSNLHR
Trigger: CCTGTGTAGGTTAGAGAAGAGGTCTTGGGGACCCCACTCCATACATTGTGCTGTCAGGTGCAGGCCTTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558752.1
3UTR TCA 72 bp AAGGTGACATGCAGAGTTTTGATGACATGGCCTGAATaGCAACACACAGGGCCAGAGCTCCCCAGAGCGTTT +
Preference number: 3 (lower is better)
Translates to: KVTCRVLMTWPE*QHTGPELPRAF
Trigger: AAACGCTCTGGGGAGCTCTGGCCCTGTGTGTTGTCATTCAGGCCATGTCATCAAAACTCTGCATGTCACCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
3UTR CCA 72 bp ACTGCCCCAGCTGGGATTCTTCAGGCCACCTCACAATaGGACAGTAGGTCTCAATCACAAGTCAGCAAACTT +
Preference number: 3 (lower is better)
Translates to: TAPAGILQATSQ*DSRSQSQVSKL
Trigger: AAGTTTGCTGACTTGTGATTGAGACCTACTGTCCCATTGTGAGGTGGCCTGAAGAATCCCAGCTGGGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
3UTR-3UTR CAA 90 bp CACATGGATCTGGCATGTCTTCCAGGTGCTTGGGAAACACGAGCATTAGTTTGTGATAAACCTGCCAGCTaGTGGGCTGCAAATCAGTGC +
Preference number: 3 (lower is better)
Translates to: HMDLACLPGAWETRALVCDKPAS*WAANQC
Trigger: GCACTGATTTGCAGCCCACAAGCTGGCAGGTTTATC...ACAAACTAATGCTCGTGTTTCCCAAGCACCTGGAAGACATGCCAGATCCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR-3UTR CAA 90 bp CTAGGAAGGGCCACCCATGTATTCGGCAATCCAAGAGGTGAAAGCTTTCAGGACAACAGACTGCGTTTGTaGCTGCCACTGAGTAAAAGG +
Preference number: 3 (lower is better)
Translates to: LGRATHVFGNPRGESFQDNRLRL*LPLSKR
Trigger: CCTTTTACTCAGTGGCAGCAACAAACGCAGTCTGTT...GTCCTGAAAGCTTTCACCTCTTGGATTGCCGAATACATGGGTGGCCCTTCCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428193.6
3UTR TCA 72 bp TATTCTAGTAACTGGCTACAAGAGAAACAGGGGAATTaGTACCATTCCTGGGCAGCGCCAAACAGCCTGGGC +
Preference number: 3 (lower is better)
Translates to: YSSNWLQEKQGN*YHSWAAPNSLG
Trigger: GCCCAGGCTGTTTGGCGCTGCCCAGGAATGGTATCAATTCCCCTGTTTCTCTTGTAGCCAGTTACTAGAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR GCA 72 bp TTGCATCAAGTAAAGCCCATCCCCTCCAAATGTGGCTaGACCCACTCCCTGGATGCAAAAGTCATCTCATCT +
Preference number: 3 (lower is better)
Translates to: LHQVKPIPSKCG*THSLDAKVISS
Trigger: AGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGAGGGGATGGGCTTTACTTGATGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
3UTR-3UTR CAA 90 bp CCACCTCACAATGGGACAGTAGGTCTCAATCACAAGTCAGCAAACTTTTTCTGTCTGCATGGCCAGCCATaGACATCACCTCCAGATGGA +
Preference number: 3 (lower is better)
Translates to: PPHNGTVGLNHKSANFFCLHGQP*TSPPDG
Trigger: TCCATCTGGAGGTGATGTCAATGGCTGGCCATGCAG...ACAGAAAAAGTTTGCTGACTTGTGATTGAGACCTACTGTCCCATTGTGAGGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
3UTR-3UTR CAA 90 bp ATCTCAGAGATGAGGTTGCATCAAGTAAAGCCCATCCCCTCCAAATGTGGCTGCATCTCAGAGATGAGGTaGCATCAAGTAAAGCCCATC +
Preference number: 3 (lower is better)
Translates to: ISEMRLHQVKPIPSKCGCISEMR*HQVKPI
Trigger: GATGGGCTTTACTTGATGCAACCTCATCTCTGAGAT...GCAGCCACATTTGGAGGGGATGGGCTTTACTTGATGCAACCTCATCTCTGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
3UTR GCA 72 bp GGCATTACTGCACATGGATCTGGCATGTCTTCCAGGTaGTTGGGAAACACGAGCATTAGTTTGTGTACAAAT +
Preference number: 3 (lower is better)
Translates to: GITAHGSGMSSR*LGNTSISLCTN
Trigger: ATTTGTACACAAACTAATGCTCGTGTTTCCCAAGCACCTGGAAGACATGCCAGATCCATGTGCAGTAATGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CCA 72 bp TTACTGCACATGGATCTGGCATGTCTTCCAGGTGCTTaGGAAACACGAGCATTAGTTTGTGTACAAATTAGT +
Preference number: 3 (lower is better)
Translates to: LLHMDLACLPGA*ETRALVCVQIS
Trigger: ACTAATTTGTACACAAACTAATGCTCGTGTTTCCCAAGCACCTGGAAGACATGCCAGATCCATGTGCAGTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp AACACCCTGGCGCCAGGGATGCCCGCCGCGATGGCAGTTACCGCTCTTCCTGCCGGATGCCCGCCGCGATaGCAGTTACCGCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: NTLAPGMPAAMAVTALPAGCPPR*QLPLFL
Trigger: CAGGAAGAGCGGTAACTGCCATCGCGGCGGGCATCC...GGCAGGAAGAGCGGTAACTGCCATCGCGGCGGGCATCCCTGGCGCCAGGGTGTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431533.6
CDS-3UTR TCA 90 bp CCCAGACCAACACCCTGGCGCCAGGGATGCCCGCCGCGATGGCAGTTACCGCTCTTCCCACCTGTGGGATaGAACCATCCATCCCCACCC +
Preference number: 4 (lower is better)
Translates to: PRPTPWRQGCPPRWQLPLFPPVG*NHPSPP
Trigger: GGGTGGGGATGGATGGTTTCATCCCACAGGTGGGAA...GAGCGGTAACTGCCATCGCGGCGGGCATCCCTGGCGCCAGGGTGTTGGTCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431533.6
3UTR CAA 72 bp GTGGGGAGTCTGGAGTCCCCAGCGCTCTGCACAACTTaGGGCTTGGCAGCCTTCCAGGGTGCGCCCTACGCT +
Preference number: 4 (lower is better)
Translates to: VGSLESPALCTT*GLAAFQGAPYA
Trigger: AGCGTAGGGCGCACCCTGGAAGGCTGCCAAGCCCAAAGTTGTGCAGAGCGCTGGGGACTCCAGACTCCCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp GCCTCAGTCCCGAGTCTCTGCTGCTGTGGGGAGTCTGGAGTCCCCAGCGCTCTGCTCATCTTCCTCCCGTaGTGTCTGTCGTCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: ASVPSLCCCGESGVPSALLIFLP*CLSSPR
Trigger: CCTGGGGGACGACAGACATCACGGGAGGAAGATGAG...CAGAGCGCTGGGGACTCCAGACTCCCCACAGCAGCAGAGACTCGGGACTGAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp GTCGAGGCCCTGACAGTCCCCTTACTCTCAGTCAGAGCCGGGGGTGGTCTCAGAGGGCTGTGTTACGGATaGGACCAGGGGAGGCCACAC +
Preference number: 4 (lower is better)
Translates to: VEALTVPLLSVRAGGGLRGLCYG*DQGRPH
Trigger: GTGTGGCCTCCCCTGGTCTCATCCGTAACACAGCCC...TCTGAGACCACCCCCGGCTCTGACTGAGAGTAAGGGGACTGTCAGGGCCTCGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp CCACTGCCCCAGCTGGGATTCTTCAGGCCACCTCACAATGGGACAGTAGGTCTCAAGTCACCAGCGGAGTaGGGCCAGCTGGAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: PLPQLGFFRPPHNGTVGLKSPAE*GQLEVG
Trigger: GCCCACCTCCAGCTGGCCTCACTCCGCTGGTGACTT...GAGACCTACTGTCCCATTGTGAGGTGGCCTGAAGAATCCCAGCTGGGGCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp GCCTCAGTCCCGAGTCTCTGCTGCTGTGGGGAGTCTGGAGTCCCCAGCGCTCTGCCAGAAAGTCTCCAGTaGGCAAACTCTCAGGACCGG +
Preference number: 4 (lower is better)
Translates to: ASVPSLCCCGESGVPSALPESLQ*ANSQDR
Trigger: CCGGTCCTGAGAGTTTGCTCACTGGAGACTTTCTGG...CAGAGCGCTGGGGACTCCAGACTCCCCACAGCAGCAGAGACTCGGGACTGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp GCCTCAGTCCCGAGTCTCTGCTGCTGTGGGGAGTCTGGAGTCCCCAGCGCTCTGACAGCTGGGCATAACTaGCAGAGCTGGGACTGGAAC +
Preference number: 4 (lower is better)
Translates to: ASVPSLCCCGESGVPSALTAGHN*QSWDWN
Trigger: GTTCCAGTCCCAGCTCTGCCAGTTATGCCCAGCTGT...CAGAGCGCTGGGGACTCCAGACTCCCCACAGCAGCAGAGACTCGGGACTGAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp CTGGGCAATCAGGAAAGCTTGGGTGACAGGGTGGCCCAGGAGCGGCCACTGAGAGAGTCTCTGCTGCTGTaGGGAGTCTGGAGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LGNQESLGDRVAQERPLRESLLL*GVWSPQ
Trigger: CTGGGGACTCCAGACTCCCCACAGCAGCAGAGACTC...TCTCAGTGGCCGCTCCTGGGCCACCCTGTCACCCAAGCTTTCCTGATTGCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp CAACACCCTGGCGCCAGGGATGCCCGCCGCGATGGCAGTTACCGCTCTTCCTGCAAAGGGGCCGCTCTCTaGCCCAAACCAGACAAAACT +
Preference number: 4 (lower is better)
Translates to: QHPGARDARRDGSYRSSCKGAAL*PKPDKT
Trigger: AGTTTTGTCTGGTTTGGGCCAGAGAGCGGCCCCTTT...GCAGGAAGAGCGGTAACTGCCATCGCGGCGGGCATCCCTGGCGCCAGGGTGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000431533.6
3UTR CAA 72 bp CCGGGGGTGGTCTCAGACAGGGAGCAGAGTCCTTCTTaGAATCGGGTACCCCAGGATGGCAGGAACCAGGGG +
Preference number: 4 (lower is better)
Translates to: PGVVSDREQSPS*NRVPQDGRNQG
Trigger: CCCCTGGTTCCTGCCATCCTGGGGTACCCGATTCAAAGAAGGACTCTGCTCCCTGTCTGAGACCACCCCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CAA 72 bp AGTCTGGAGTCCCCAGCGCTCTGCACAACTTTGGGCTaGGCAGCCTTCCAGGGTGCGCCCTACGCTCACTCA +
Preference number: 4 (lower is better)
Translates to: SLESPALCTTLG*AAFQGAPYAHS
Trigger: TGAGTGAGCGTAGGGCGCACCCTGGAAGGCTGCCAAGCCCAAAGTTGTGCAGAGCGCTGGGGACTCCAGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR GCA 90 bp ACACACAGGGCCAGAGCTCCCCAGAGCGTTTCAAAAAGGGAGGCCCAGTCGAGGGGAAGGGCAGTGGTCTaGCTCAAAACGCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: THRARAPQSVSKREAQSRGRAVV*LKTQGS
Trigger: GGAGCCCTGCGTTTTGAGGCAGACCACTGCCCTTCC...CCTCGACTGGGCCTCCCTTTTTGAAACGCTCTGGGGAGCTCTGGCCCTGTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR GCA 90 bp CCAGGGGTGCCATGGATGCTGGATCCTTGGTCCCTGGCAGTGGCTGACAGAGTTGCCCTGAGCTGGGAATaGTGCCGGGCATCACTCTTG +
Preference number: 4 (lower is better)
Translates to: PGVPWMLDPWSLAVADRVALSWE*CRASLL
Trigger: CAAGAGTGATGCCCGGCAGCATTCCCAGCTCAGGGC...AACTCTGTCAGCCACTGCCAGGGACCAAGGATCCAGCATCCATGGCACCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp ACACACAGGGCCAGAGCTCCCCAGAGCGTTTCAAAAAGGGAGGCCCAGTCGAGGCCCACCCCTCCTGCATaGCCAGCCATTGACATCACC +
Preference number: 4 (lower is better)
Translates to: THRARAPQSVSKREAQSRPTPPA*PAIDIT
Trigger: GGTGATGTCAATGGCTGGCCATGCAGGAGGGGTGGG...CCTCGACTGGGCCTCCCTTTTTGAAACGCTCTGGGGAGCTCTGGCCCTGTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
CDS-3UTR CCA 90 bp AACAGAGGCCCACTAAGCTGGGCTGTGTTACGGATGAGACCAGGGGAGGCCACAACGGCGGGGCAGACCTaGAGCCACCAGGCATTACTG +
Preference number: 4 (lower is better)
Translates to: NRGPLSWAVLRMRPGEATTAGQT*SHQALL
Trigger: CAGTAATGCCTGGTGGCTCCAGGTCTGCCCCGCCGT...TGTGGCCTCCCCTGGTCTCATCCGTAACACAGCCCAGCTTAGTGGGCCTCTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp CCACTGCCCCAGCTGGGATTCTTCAGGCCACCTCACAATGGGACAGTAGGTCTCACACGGGCAGGAGGCTaGGAAAGCTCACAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: PLPQLGFFRPPHNGTVGLTRAGG*ESSQPH
Trigger: GTGGGGCTGTGAGCTTTCCCAGCCTCCTGCCCGTGT...GAGACCTACTGTCCCATTGTGAGGTGGCCTGAAGAATCCCAGCTGGGGCAGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp GAGCTGCCCAAGTCCCCACAGCTGGGCATAACTGGCAGAGCTGGGACTGGAACCGAGCGGCCACTGAGATaGGACCTAAGTGACAAGAGC +
Preference number: 4 (lower is better)
Translates to: ELPKSPQLGITGRAGTGTERPLR*DLSDKS
Trigger: GCTCTTGTCACTTAGGTCTCATCTCAGTGGCCGCTC...GGTTCCAGTCCCAGCTCTGCCAGTTATGCCCAGCTGTGGGGACTTGGGCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp TGTCCTGTGAACAGAGGATGCCTCAGTCCCGAGTCTCTGCTGCTGTGGGGAGTCCCTCTACTCAACCTCTaGGGAGCTGGGACCACAGGC +
Preference number: 4 (lower is better)
Translates to: CPVNRGCLSPESLLLWGVPLLNL*GAGTTG
Trigger: GCCTGTGGTCCCAGCTCCTCAGAGGTTGAGTAGAGG...GACTCCCCACAGCAGCAGAGACTCGGGACTGAGGCATCCTCTGTTCACAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp AGGGAGCAGAGTCCTTCTTTGAATCGGGTACCCCAGGATGGCAGGAACCAGGGGTGGAGCAGACAGGACTaGGGTCGGAAGGGCAGTGGT +
Preference number: 4 (lower is better)
Translates to: REQSPSLNRVPQDGRNQGWSRQD*GRKGSG
Trigger: ACCACTGCCCTTCCGACCTCAGTCCTGTCTGCTCCA...CCCCTGGTTCCTGCCATCCTGGGGTACCCGATTCAAAGAAGGACTCTGCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp GCATGTCCTGTGAACAGAGGATGCCTCAGTCCCGAGTCTCTGCTGCTGTGGGGAGACAGTGGGGGCTCCTaGGCAGGTACGAAGTCACCA +
Preference number: 4 (lower is better)
Translates to: ACPVNRGCLSPESLLLWGDSGGS*AGTKSP
Trigger: TGGTGACTTCGTACCTGCTCAGGAGCCCCCACTGTC...TCCCCACAGCAGCAGAGACTCGGGACTGAGGCATCCTCTGTTCACAGGACATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp GGGCCCAGCCCTCAGCCTGCACCCTTCTGGGCTAGAAAAGGCCTTTCTTCTTCTAGGTGGAGGCTGCAGTaGGCCAAGATCGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: GPSPQPAPFWARKGLSSSRWRLQ*AKIAPL
Trigger: CAATGGCGCGATCTTGGCTCACTGCAGCCTCCACCT...AGAAGAAGAAAGGCCTTTTCTAGCCCAGAAGGGTGCAGGCTGAGGGCTGGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp GCCTCAGTCCCGAGTCTCTGCTGCTGTGGGGAGTCTGGAGTCCCCAGCGCTCTGAAGACACAGAGAGGTTaGGGAACTTGCCCAAGGTTG +
Preference number: 4 (lower is better)
Translates to: ASVPSLCCCGESGVPSALKTQRG*GTCPRL
Trigger: CAACCTTGGGCAAGTTCCTCAACCTCTCTGTGTCTT...CAGAGCGCTGGGGACTCCAGACTCCCCACAGCAGCAGAGACTCGGGACTGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp TGTCCTGTGAACAGAGGATGCCTCAGTCCCGAGTCTCTGCTGCTGTGGGGAGTCCCCACCCCTCCTGCATaGCCAGCCATTGACATCACC +
Preference number: 4 (lower is better)
Translates to: CPVNRGCLSPESLLLWGVPTPPA*PAIDIT
Trigger: GGTGATGTCAATGGCTGGCCATGCAGGAGGGGTGGG...GACTCCCCACAGCAGCAGAGACTCGGGACTGAGGCATCCTCTGTTCACAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp CAGGGAGCAGAGTCCTTCTTTGAATCGGGTACCCCAGGATGGCAGGAACCAGGGAGTCAGAGCCGGGGGTaGTCTCAGACAGGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: QGAESFFESGTPGWQEPGSQSRG*SQTGSR
Trigger: TCTGCTCCCTGTCTGAGACCACCCCCGGCTCTGACT...CCCTGGTTCCTGCCATCCTGGGGTACCCGATTCAAAGAAGGACTCTGCTCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp ACACACAGGGCCAGAGCTCCCCAGAGCGTTTCAAAAAGGGAGGCCCAGTCGAGGAGGTCGGAAGGGCAGTaGTCTGCCTCAAAACGCAGG +
Preference number: 4 (lower is better)
Translates to: THRARAPQSVSKREAQSRRSEGQ*SASKRR
Trigger: CCTGCGTTTTGAGGCAGACCACTGCCCTTCCGACCT...CCTCGACTGGGCCTCCCTTTTTGAAACGCTCTGGGGAGCTCTGGCCCTGTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp GGGAGGTTCTTTCAGCACTCTGGATGTGTCCCCACTGCCTGGGCCTGGTTTCTGTTCAGATACCAGACGTaGCCTCCCCAGCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: GRFFQHSGCVPTAWAWFLFRYQT*PPQPSH
Trigger: GTGGCTGGGCTGGGGAGGCCACGTCTGGTATCTGAA...CAGAAACCAGGCCCAGGCAGTGGGGACACATCCAGAGTGCTGAAAGAACCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp CCAGGGGTGCCATGGATGCTGGATCCTTGGTCCCTGGCAGTGGCTGACAGAGTTTGTGTCCCCACTGCCTaGGCCTGGTTTCTGATGAGG +
Preference number: 4 (lower is better)
Translates to: PGVPWMLDPWSLAVADRVCVPTA*AWFLMR
Trigger: CCTCATCAGAAACCAGGCCCAGGCAGTGGGGACACA...AACTCTGTCAGCCACTGCCAGGGACCAAGGATCCAGCATCCATGGCACCCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp AACAGAGGCCCACTAAGCTGGGCTGTGTTACGGATGAGACCAGGGGAGGCCACAGCACAACTTTGGGCTTaGCAGCCTTCCAGGGTGCGC +
Preference number: 4 (lower is better)
Translates to: NRGPLSWAVLRMRPGEATAQLWA*QPSRVR
Trigger: GCGCACCCTGGAAGGCTGCCAAGCCCAAAGTTGTGC...TGTGGCCTCCCCTGGTCTCATCCGTAACACAGCCCAGCTTAGTGGGCCTCTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp TTTGGGCTTGGCAGCCTTCCAGGGTGCGCCCTACGCTCACTCACCATGCAGCTACAGCGCCAAACAGCCTaGGCTGGAAATGCAGCTGAG +
Preference number: 4 (lower is better)
Translates to: FGLGSLPGCALRSLTMQLQRQTA*AGNAAE
Trigger: CTCAGCTGCATTTCCAGCCCAGGCTGTTTGGCGCTG...TAGCTGCATGGTGAGTGAGCGTAGGGCGCACCCTGGAAGGCTGCCAAGCCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CAA 72 bp CCAAAGGAAACAAGAGGGCTGGGCAATCAGGAAAGCTaGGGTGACAGGGTGGCCCAGGAGCGGCCACTGAGA +
Preference number: 4 (lower is better)
Translates to: PKETRGLGNQES*GDRVAQERPLR
Trigger: TCTCAGTGGCCGCTCCTGGGCCACCCTGTCACCCAAGCTTTCCTGATTGCCCAGCCCTCTTGTTTCCTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp GAACCCCAGGCCCATCCCCACAGCAGTGGTTCAACATCAGCTTGGCTGAGAGGCTGGACTACGTGTCCCTaGGACAGGAGGATCACTAGC +
Preference number: 4 (lower is better)
Translates to: EPQAHPHSSGSTSAWLRGWTTCP*DRRITS
Trigger: GCTAGTGATCCTCCTGTCTCAGGGACACGTAGTCCA...GCCTCTCAGCCAAGCTGATGTTGAACCACTGCTGTGGGGATGGGCCTGGGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428193.6
CDS-3UTR GCA 90 bp CCACTGCCCCAGCTGGGATTCTTCAGGCCACCTCACAATGGGACAGTAGGTCTCTCAGTCCCGAGTCTCTaGTGCTGTGGGGAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: PLPQLGFFRPPHNGTVGLSVPSL*CCGESG
Trigger: TCCAGACTCCCCACAGCAGCAGAGACTCGGGACTGA...GAGACCTACTGTCCCATTGTGAGGTGGCCTGAAGAATCCCAGCTGGGGCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp CCCCAGCTGGGATTCTTCAGGCCACCTCACAATGGGACAGTAGGTCTCAATCACTCGGGTACCCCAGGATaGCAGGAACCAGGGGTGCCA +
Preference number: 4 (lower is better)
Translates to: PQLGFFRPPHNGTVGLNHSGTPG*QEPGVP
Trigger: TGGCACCCCTGGTTCCTGCCATCCTGGGGTACCCGA...GTGATTGAGACCTACTGTCCCATTGTGAGGTGGCCTGAAGAATCCCAGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp AGCGTTTCAAAAAGGGAGGCCCAGTCGAGGCAGGTGAGAAAGCCAGCTGACTTTGGACTCCACAGGGGGTaGGGCCTAGAGGCACAAGCC +
Preference number: 4 (lower is better)
Translates to: SVSKREAQSRQVRKPADFGLHRG*GLEAQA
Trigger: GGCTTGTGCCTCTAGGCCCCACCCCCTGTGGAGTCC...AAAGTCAGCTGGCTTTCTCACCTGCCTCGACTGGGCCTCCCTTTTTGAAACGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp AACAGAGGCCCACTAAGCTGGGCTGTGTTACGGATGAGACCAGGGGAGGCCACACCATTAGCCCTGAGCTaGGAATGCTGCCGGGCATCA +
Preference number: 4 (lower is better)
Translates to: NRGPLSWAVLRMRPGEATPLALS*ECCRAS
Trigger: TGATGCCCGGCAGCATTCCCAGCTCAGGGCTAATGG...TGTGGCCTCCCCTGGTCTCATCCGTAACACAGCCCAGCTTAGTGGGCCTCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp CCCAGAACGGGGTCCCCAAGTGCCAAGCAATTGGCTGCTCCCTGGACTACGTGTGGTTCAACATCAGCTTaGCTGAGAGGCCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: PRTGSPSAKQLAAPWTTCGSTSA*LRGPAS
Trigger: TGAGGCTGGGCCTCTCAGCCAAGCTGATGTTGAACC...ACACGTAGTCCAGGGAGCAGCCAATTGCTTGGCACTTGGGGACCCCGTTCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428193.6
CDS-3UTR CCA 90 bp GGCCCATCCCCACAGCAGTGGTTCAACATCAGCTTGGCTGAGAGGCCCAGCCTCCCATCCCCACAGCAGTaGTTCAACATCAGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: GPSPQQWFNISLAERPSLPSPQQ*FNISLA
Trigger: AGCCAAGCTGATGTTGAACCACTGCTGTGGGGATGG...GAGGCTGGGCCTCTCAGCCAAGCTGATGTTGAACCACTGCTGTGGGGATGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428193.6
CDS-3UTR TCA 90 bp CAGCAGAGCCCTGACCCAGTAGATGCCAGCATGTCCTGTGAACAGAGGATGCCTAGTGAGCTCTCCTTATaGAGGCGGAGTCCCAGCGCA +
Preference number: 4 (lower is better)
Translates to: QQSPDPVDASMSCEQRMPSELSL*RRSPSA
Trigger: TGCGCTGGGACTCCGCCTTCATAAGGAGAGCTCACT...AGGCATCCTCTGTTCACAGGACATGCTGGCATCTACTGGGTCAGGGCTCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp GCATGTCCTGTGAACAGAGGATGCCTCAGTCCCGAGTCTCTGCTGCTGTGGGGAAAGGACAAGGCCTTCTaGGCAGCAGCAGCCACATCA +
Preference number: 4 (lower is better)
Translates to: ACPVNRGCLSPESLLLWGKDKAF*AAAATS
Trigger: TGATGTGGCTGCTGCTGCTCAGAAGGCCTTGTCCTT...TCCCCACAGCAGCAGAGACTCGGGACTGAGGCATCCTCTGTTCACAGGACATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp CCCCAGCTGGGATTCTTCAGGCCACCTCACAATGGGACAGTAGGTCTCAATCACCAAACTCTGTGGGGCTaGGACCATCTCCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: PQLGFFRPPHNGTVGLNHQTLWG*DHLPPS
Trigger: GGAGGGAGGGAGATGGTCTCAGCCCCACAGAGTTTG...GTGATTGAGACCTACTGTCCCATTGTGAGGTGGCCTGAAGAATCCCAGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp CCAGGGGTGCCATGGATGCTGGATCCTTGGTCCCTGGCAGTGGCTGACAGAGTTCCTTATGCAGGGCTGTaGAAGGCACTCAAAATGGCC +
Preference number: 4 (lower is better)
Translates to: PGVPWMLDPWSLAVADRVPYAGL*KALKMA
Trigger: GGCCATTTTGAGTGCCTTTCACAGCCCTGCATAAGG...AACTCTGTCAGCCACTGCCAGGGACCAAGGATCCAGCATCCATGGCACCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR GCA 90 bp ACACACAGGGCCAGAGCTCCCCAGAGCGTTTCAAAAAGGGAGGCCCAGTCGAGGCTGAATGGAAGCCACTaGCCCAGCTGGGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: THRARAPQSVSKREAQSRLNGSH*PSWDSS
Trigger: TGAAGAATCCCAGCTGGGGCAGTGGCTTCCATTCAG...CCTCGACTGGGCCTCCCTTTTTGAAACGCTCTGGGGAGCTCTGGCCCTGTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
CDS-3UTR GCA 90 bp CAGCAGAGCCCTGACCCAGTAGATGCCAGCATGTCCTGTGAACAGAGGATGCCTCCCTCCAAATGTGGCTaGACCCACTCCCTGGATGCA +
Preference number: 4 (lower is better)
Translates to: QQSPDPVDASMSCEQRMPPSKCG*THSLDA
Trigger: TGCATCCAGGGAGTGGGTGCAGCCACATTTGGAGGG...AGGCATCCTCTGTTCACAGGACATGCTGGCATCTACTGGGTCAGGGCTCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR GCA 90 bp CCACTGCCCCAGCTGGGATTCTTCAGGCCACCTCACAATGGGACAGTAGGTCTCGGCTCATGGGCTCACTaGAGCCTCATACTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PLPQLGFFRPPHNGTVGLGSWAH*SLILLA
Trigger: AGCCAAGAGTATGAGGCTGCAGTGAGCCCATGAGCC...GAGACCTACTGTCCCATTGTGAGGTGGCCTGAAGAATCCCAGCTGGGGCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR GCA 90 bp TGTCCTGTGAACAGAGGATGCCTCAGTCCCGAGTCTCTGCTGCTGTGGGGAGTCGCAAGTGGTCAGATCTaGTCTCCTTCGAGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: CPVNRGCLSPESLLLWGVASGQI*SPSSWA
Trigger: TGCCCAGCTCGAAGGAGAGCAGATCTGACCACTTGC...GACTCCCCACAGCAGCAGAGACTCGGGACTGAGGCATCCTCTGTTCACAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR GCA 90 bp GGCCACACAGCAGGGAGGATTCAGATAGGGATGGAGAAAGCCAGCAGGACTCCAGAGTCCCCAGCGCTCTaGACAACTTTGGGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: GHTAGRIQIGMEKASRTPESPAL*TTLGLA
Trigger: TGCCAAGCCCAAAGTTGTGCAGAGCGCTGGGGACTC...TGGAGTCCTGCTGGCTTTCTCCATCCCTATCTGAATCCTCCCTGCTGTGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR GCA 90 bp CCACTGCCCCAGCTGGGATTCTTCAGGCCACCTCACAATGGGACAGTAGGTCTCCCTGTGAACAGAGGATaGCTCAGTCCCGAGTCTCTG +
Preference number: 4 (lower is better)
Translates to: PLPQLGFFRPPHNGTVGLPVNRG*LSPESL
Trigger: CAGAGACTCGGGACTGAGGCATCCTCTGTTCACAGG...GAGACCTACTGTCCCATTGTGAGGTGGCCTGAAGAATCCCAGCTGGGGCAGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp TCCCCTCCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTGAGACAGGGGAGGGATaGGGACACCTGGAGGACGGG +
Preference number: 4 (lower is better)
Translates to: SPPNVAAPTPWMQKSSHLETGEG*GHLEDG
Trigger: CCCGTCCTCCAGGTGTCCCCATCCCTCCCCTGTCTC...AAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp CAGCAGAGCCCTGACCCAGTAGATGCCAGCATGTCCTGTGAACAGAGGATGCCTCTTGGTCCCTGGCAGTaGCTGACAGAGTTAGGTGCC +
Preference number: 4 (lower is better)
Translates to: QQSPDPVDASMSCEQRMPLGPWQ*LTELGA
Trigger: GGCACCTAACTCTGTCAGCCACTGCCAGGGACCAAG...AGGCATCCTCTGTTCACAGGACATGCTGGCATCTACTGGGTCAGGGCTCTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp ACACACAGGGCCAGAGCTCCCCAGAGCGTTTCAAAAAGGGAGGCCCAGTCGAGGTGGATCCTTGGTCCCTaGCAGTGGCTGACAGAGTTA +
Preference number: 4 (lower is better)
Translates to: THRARAPQSVSKREAQSRWILGP*QWLTEL
Trigger: TAACTCTGTCAGCCACTGCCAGGGACCAAGGATCCA...CCTCGACTGGGCCTCCCTTTTTGAAACGCTCTGGGGAGCTCTGGCCCTGTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp CTGGTTCCTCCACCCCAACCCACCGATAGCATTCAGATACCAGACGTGGCCTCCTACGACCCCAACCAATaGCAAGTCGAGGCCCTGACA +
Preference number: 4 (lower is better)
Translates to: LVPPPQPTDSIQIPDVASYDPNQ*QVEALT
Trigger: TGTCAGGGCCTCGACTTGCCATTGGTTGGGGTCGTA...GGAGGCCACGTCTGGTATCTGAATGCTATCGGTGGGTTGGGGTGGAGGAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp GGGCCCAGCCCTCAGCCTGCACCCTTCTGGGCTAGAAAAGGCCTTTCTTCTTCTACAGCAGACAGGGGCTaGCAAGTGGTCAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: GPSPQPAPFWARKGLSSSTADRG*QVVRSA
Trigger: AGCAGATCTGACCACTTGCCAGCCCCTGTCTGCTGT...AGAAGAAGAAAGGCCTTTTCTAGCCCAGAAGGGTGCAGGCTGAGGGCTGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp CAGGGAGCAGAGTCCTTCTTTGAATCGGGTACCCCAGGATGGCAGGAACCAGGGAGGCCTTTCTTCTTCTaGATGGAAGCCACTGCCCCA +
Preference number: 4 (lower is better)
Translates to: QGAESFFESGTPGWQEPGRPFFF*MEATAP
Trigger: TGGGGCAGTGGCTTCCATTCAGAAGAAGAAAGGCCT...CCCTGGTTCCTGCCATCCTGGGGTACCCGATTCAAAGAAGGACTCTGCTCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp TCCCCTCCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTTCAGGAAAGCTTGGGTaGCAGGGTGGCCCAGGAGCG +
Preference number: 4 (lower is better)
Translates to: SPPNVAAPTPWMQKSSHLSGKLG*QGGPGA
Trigger: CGCTCCTGGGCCACCCTGTCACCCAAGCTTTCCTGA...AAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp CCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCCTCCCGGCAAGTCGAGGCCCTaGCAGTCCCCTTACTCTCAG +
Preference number: 4 (lower is better)
Translates to: PNVAAPTPWMQKSSHLPPGKSRP*QSPYSQ
Trigger: CTGAGAGTAAGGGGACTGTCAGGGCCTCGACTTGCC...GGGAGGAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR GCA 90 bp GGGCCCAGCCCTCAGCCTGCACCCTTCTGGGCTAGAAAAGGCCTTTCTTCTTCTCTGAATGGAAGCCACTaGCCCAGCTGGGATTCTTCA +
Preference number: 4 (lower is better)
Translates to: GPSPQPAPFWARKGLSSSLNGSH*PSWDSS
Trigger: TGAAGAATCCCAGCTGGGGCAGTGGCTTCCATTCAG...AGAAGAAGAAAGGCCTTTTCTAGCCCAGAAGGGTGCAGGCTGAGGGCTGGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
CDS-3UTR GCA 90 bp AGCTTGTGGGCTGCAAATCAGTGCTGTGGAGGACAACTGAAGCAGGTGCCAGGGTGGATGTGTCCCCACTaGCTGGGCCTGGTTTCTGAT +
Preference number: 4 (lower is better)
Translates to: SLWAANQCCGGQLKQVPGWMCPH*LGLVSD
Trigger: ATCAGAAACCAGGCCCAGGCAGTGGGGACACATCCA...CCCTGGCACCTGCTTCAGTTGTCCTCCACAGCACTGATTTGCAGCCCACAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR GCA 90 bp TCTTCTGAATGGAAGCCACTGCCCCAGCTGGGATTCTTCAGGCCACCTCACAATGTCCCGAGTCTCTGCTaGTGTGGGGAGTCTGGAGTC +
Preference number: 4 (lower is better)
Translates to: SSEWKPLPQLGFFRPPHNVPSLC*CGESGV
Trigger: GACTCCAGACTCCCCACAGCAGCAGAGACTCGGGAC...ATTGTGAGGTGGCCTGAAGAATCCCAGCTGGGGCAGTGGCTTCCATTCAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR GCA 90 bp TTTGGGCTTGGCAGCCTTCCAGGGTGCGCCCTACGCTCACTCACCATGCAGCTAGGCATGTCTTCCAGGTaGTTGGGAAACACGAGCATT +
Preference number: 4 (lower is better)
Translates to: FGLGSLPGCALRSLTMQLGMSSR*LGNTSI
Trigger: AATGCTCGTGTTTCCCAAGCACCTGGAAGACATGCC...TAGCTGCATGGTGAGTGAGCGTAGGGCGCACCCTGGAAGGCTGCCAAGCCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp GCATGTCCTGTGAACAGAGGATGCCTCAGTCCCGAGTCTCTGCTGCTGTGGGGACAGCCTGCACCCTTCTaGGCTAGAAAAGGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: ACPVNRGCLSPESLLLWGQPAPF*ARKGLS
Trigger: AGAAAGGCCTTTTCTAGCCCAGAAGGGTGCAGGCTG...TCCCCACAGCAGCAGAGACTCGGGACTGAGGCATCCTCTGTTCACAGGACATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp CCAGGGGTGCCATGGATGCTGGATCCTTGGTCCCTGGCAGTGGCTGACAGAGTTAAACCTGCCAGCTTGTaGGCTGCAAATCAGTGCTGT +
Preference number: 4 (lower is better)
Translates to: PGVPWMLDPWSLAVADRVKPASL*AANQCC
Trigger: ACAGCACTGATTTGCAGCCCACAAGCTGGCAGGTTT...AACTCTGTCAGCCACTGCCAGGGACCAAGGATCCAGCATCCATGGCACCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp GAGCTGCCCAAGTCCCCACAGCTGGGCATAACTGGCAGAGCTGGGACTGGAACCTACTGGACTAAGAGCTaGAGAGACAGCAGTGAACAC +
Preference number: 4 (lower is better)
Translates to: ELPKSPQLGITGRAGTGTYWTKS*RDSSEH
Trigger: GTGTTCACTGCTGTCTCTCCAGCTCTTAGTCCAGTA...GGTTCCAGTCCCAGCTCTGCCAGTTATGCCCAGCTGTGGGGACTTGGGCAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp GCCTCAGTCCCGAGTCTCTGCTGCTGTGGGGAGTCTGGAGTCCCCAGCGCTCTGTACAATCAGGATTTGTaGGCACAGTCAAGCAGGTTT +
Preference number: 4 (lower is better)
Translates to: ASVPSLCCCGESGVPSALYNQDL*AQSSRF
Trigger: AAACCTGCTTGACTGTGCCCACAAATCCTGATTGTA...CAGAGCGCTGGGGACTCCAGACTCCCCACAGCAGCAGAGACTCGGGACTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp GTCGAGGCCCTGACAGTCCCCTTACTCTCAGTCAGAGCCGGGGGTGGTCTCAGAAGGCATTACTGCACATaGATCTGGCATGTCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VEALTVPLLSVRAGGGLRRHYCT*IWHVFQ
Trigger: CTGGAAGACATGCCAGATCCATGTGCAGTAATGCCT...TCTGAGACCACCCCCGGCTCTGACTGAGAGTAAGGGGACTGTCAGGGCCTCGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp TGTCCTGTGAACAGAGGATGCCTCAGTCCCGAGTCTCTGCTGCTGTGGGGAGTCTTTGATGACATGGCCTaGATGACAACACACAGGGCC +
Preference number: 4 (lower is better)
Translates to: CPVNRGCLSPESLLLWGVFDDMA*MTTHRA
Trigger: GGCCCTGTGTGTTGTCATTCAGGCCATGTCATCAAA...GACTCCCCACAGCAGCAGAGACTCGGGACTGAGGCATCCTCTGTTCACAGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp CTCCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCCTCCTCATCTTCCTCCCGTaGTGTCTGTCGTCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LQMWLHPLPGCKSHLIFLLIFLP*CLSSPR
Trigger: CCTGGGGGACGACAGACATCACGGGAGGAAGATGAG...GAGGAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
CDS-3UTR TCA 90 bp TTCAGGGAATCCCCAAAAAGGCCTGCACCTGACAGCACAATGTATGGAGTGGGGTTCCCACCTGTGGGATaGAACCATCCATCCCCACCC +
Preference number: 4 (lower is better)
Translates to: FRESPKRPAPDSTMYGVGFPPVG*NHPSPP
Trigger: GGGTGGGGATGGATGGTTTCATCCCACAGGTGGGAA...CCCCACTCCATACATTGTGCTGTCAGGTGCAGGCCTTTTTGGGGATTCCCTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000558752.1
CDS-3UTR GCA 90 bp CTCCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCCTCCAAGTCCCCAAACCGTaGTACAGCACCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LQMWLHPLPGCKSHLIFLQVPKP*YSTRAQ
Trigger: CTGGGCCCTGGTGCTGTAGCACGGTTTGGGGACTTG...GAGGAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
CDS-3UTR GCA 90 bp CATTACTGCACATGGATCTGGCATGTCTTCCAGGTGCTTGGGAAACACGAGCATCCAGGAGGTGGAGGCTaGAGTGAGCCAAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: HYCTWIWHVFQVLGKHEHPGGGG*SEPRSR
Trigger: GCGCGATCTTGGCTCACTGCAGCCTCCACCTCCTGG...ATGCTCGTGTTTCCCAAGCACCTGGAAGACATGCCAGATCCATGTGCAGTAATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR GCA 90 bp GGATTCTTCAGGCCACCTCACAATGGGACAGTAGGTCTCAATCACAAGTCAGCAAACCCCAGCTCACCATaGGCAGGTCGGGGCGGTACT +
Preference number: 4 (lower is better)
Translates to: GFFRPPHNGTVGLNHKSANPSSP*AGRGGT
Trigger: AGTACCGCCCCGACCTGCGCATGGTGAGCTGGGGTT...TGCTGACTTGTGATTGAGACCTACTGTCCCATTGTGAGGTGGCCTGAAGAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000560583.5
CDS-3UTR GCA 90 bp ATCACAAGTCAGCAAACTTTTTCTGTGAAGACAGTGACCCTTGCCCTCACCAGGCGCCCCCTAGGCCAATaGTGGGTGTGGGGAGTAGGC +
Preference number: 4 (lower is better)
Translates to: ITSQQTFSVKTVTLALTRRPLGQ*WVWGVG
Trigger: GCCTACTCCCCACACCCAGCATTGGCCTAGGGGGCG...CCTGGTGAGGGCAAGGGTCACTGTCTTCACAGAAAAAGTTTGCTGACTTGTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000560583.5
CDS-3UTR CCA 90 bp GCATGTCCTGTGAACAGAGGATGCCTCAGTCCCGAGTCTCTGCTGCTGTGGGGACTTTCTTCTTCTGAATaGAAGCCACTGCCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: ACPVNRGCLSPESLLLWGLSSSE*KPLPQL
Trigger: CAGCTGGGGCAGTGGCTTCCATTCAGAAGAAGAAAG...TCCCCACAGCAGCAGAGACTCGGGACTGAGGCATCCTCTGTTCACAGGACATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp GGATTCTTCAGGCCACCTCACAATGGGACAGTAGGTCTCAATCACAAGTCAGCAAGGGATGGGGACACCTaGAGGACGGGAGTAGGGGGA +
Preference number: 4 (lower is better)
Translates to: GFFRPPHNGTVGLNHKSARDGDT*RTGVGG
Trigger: TCCCCCTACTCCCGTCCTCCAGGTGTCCCCATCCCT...TGCTGACTTGTGATTGAGACCTACTGTCCCATTGTGAGGTGGCCTGAAGAATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp GGCCACACAGCAGGGAGGATTCAGATAGGGATGGAGAAAGCCAGCAGGACTCCACCTCACTGTGTGTCATaGTGTCTTCCAGGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: GHTAGRIQIGMEKASRTPPHCVS*CLPGWS
Trigger: ACTCCAGCCTGGAAGACACCATGACACACAGTGAGG...TGGAGTCCTGCTGGCTTTCTCCATCCCTATCTGAATCCTCCCTGCTGTGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp GATGAGGTTGCATCAAGTAAAGCCCATCCCCTCCAAATGTGGCTGCACCCACTCTGGATGCTGGATCCTTaGTCCCTGGCAGTGGCTGAC +
Preference number: 4 (lower is better)
Translates to: DEVASSKAHPLQMWLHPLWMLDP*SLAVAD
Trigger: GTCAGCCACTGCCAGGGACCAAGGATCCAGCATCCA...GAGTGGGTGCAGCCACATTTGGAGGGGATGGGCTTTACTTGATGCAACCTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp CATCAAGTAAAGCCCATCCCCTCCAAATGTGGCTGCACCCACTCCCTGGATGCAACAGGGGCTGGCAAGTaGTCAGATCTGCTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: HQVKPIPSKCGCTHSLDATGAGK*SDLLSF
Trigger: GAAGGAGAGCAGATCTGACCACTTGCCAGCCCCTGT...TGCATCCAGGGAGTGGGTGCAGCCACATTTGGAGGGGATGGGCTTTACTTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp TCTTCTGAATGGAAGCCACTGCCCCAGCTGGGATTCTTCAGGCCACCTCACAATCCCAGTCGAGGCAGGTaGGAAAGCCAGCTGACTTTA +
Preference number: 4 (lower is better)
Translates to: SSEWKPLPQLGFFRPPHNPSRGR*ESQLTL
Trigger: TAAAGTCAGCTGGCTTTCTCACCTGCCTCGACTGGG...ATTGTGAGGTGGCCTGAAGAATCCCAGCTGGGGCAGTGGCTTCCATTCAGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
CDS-3UTR TCA 90 bp CCCCTCCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCCTCTTGGGGATAGGATaGCCTGGGGGAGGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: PLQMWLHPLPGCKSHLIFLLGIG*PGGGSF
Trigger: GAAAGAACCTCCCCCAGGTCATCCTATCCCCAAGAG...GAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp CCCTCCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCCTGCCAGCATGTCCTGTaGACAGAGGATGCCTCAGTC +
Preference number: 4 (lower is better)
Translates to: PSKCGCTHSLDAKVISSSCQHVL*TEDASV
Trigger: GACTGAGGCATCCTCTGTTCACAGGACATGCTGGCA...GGAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp TCCACTTTACAGGTGAGGACACGGGCTCAGACGCGCGCGGCTCACAGAGCTGACTTTGAGAATTTCATCTaGAAACATCAACCCCGTGCC +
Preference number: 4 (lower is better)
Translates to: STLQVRTRAQTRAAHRADFENFI*KHQPRA
Trigger: GGCACGGGGTTGATGTTTTCAGATGAAATTCTCAAA...GTCAGCTCTGTGAGCCGCGCGCGTCTGAGCCCGTGTCCTCACCTGTAAAGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000431533.6
CDS-3UTR GCA 90 bp AACAGAGGCCCACTAAGCTGGGCTGTGTTACGGATGAGACCAGGGGAGGCCACACACCCACTCCCTGGATaGAAAAGTCATCTCATCTTC +
Preference number: 4 (lower is better)
Translates to: NRGPLSWAVLRMRPGEATHPLPG*KSHLIF
Trigger: GAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTG...TGTGGCCTCCCCTGGTCTCATCCGTAACACAGCCCAGCTTAGTGGGCCTCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR GCA 90 bp CTCCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCCTCGCTAAGGCTGCTCAATaGCTGCTGGCTGTACCCTGG +
Preference number: 4 (lower is better)
Translates to: LQMWLHPLPGCKSHLIFLAKAAQ*LLAVPW
Trigger: CCAGGGTACAGCCAGCAGGCATTGAGCAGCCTTAGC...GAGGAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR GCA 90 bp TCCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCCTCCGGCAGGAACCAGGGGTaGCATGGATGCTGGATCCTT +
Preference number: 4 (lower is better)
Translates to: SKCGCTHSLDAKVISSSSGRNQG*HGCWIL
Trigger: AAGGATCCAGCATCCATGGCACCCCTGGTTCCTGCC...GGAGGAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR GCA 90 bp TCCCCTCCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTGAACTTGCCCAAGGTTaGACAGCCACCGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SPPNVAAPTPWMQKSSHLELAQG*TATEQQ
Trigger: CTGCTGCTCGGTGGCTGTGCAACCTTGGGCAAGTTC...AAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR GCA 90 bp CTGCGTTTGTTGCTGCCACTGAGTAAAAGGACCCTTGGCTCTGAGGCAGTTCCATGCCAAGCAATTGGCTaGTCCCTGGACTACGTGTCC +
Preference number: 4 (lower is better)
Translates to: LRLLLPLSKRTLGSEAVPCQAIG*SLDYVS
Trigger: GGACACGTAGTCCAGGGAGCAGCCAATTGCTTGGCA...TGGAACTGCCTCAGAGCCAAGGGTCCTTTTACTCAGTGGCAGCAACAAACGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428193.6
CDS-3UTR CCA 90 bp ATCTCAGAGATGAGGTTGCATCAAGTAAAGCCCATCCCCTCCAAATGTGGCTGCGGGTGCCATGGATGCTaGATCCTTGGTCCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ISEMRLHQVKPIPSKCGCGCHGC*ILGPWQ
Trigger: CTGCCAGGGACCAAGGATCCAGCATCCATGGCACCC...GCAGCCACATTTGGAGGGGATGGGCTTTACTTGATGCAACCTCATCTCTGAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp CAGGGAGCAGAGTCCTTCTTTGAATCGGGTACCCCAGGATGGCAGGAACCAGGGTGCAAATCAGTGCTGTaGAGGACAACTGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: QGAESFFESGTPGWQEPGCKSVL*RTTEAG
Trigger: ACCTGCTTCAGTTGTCCTCCACAGCACTGATTTGCA...CCCTGGTTCCTGCCATCCTGGGGTACCCGATTCAAAGAAGGACTCTGCTCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp GAGCTGCCCAAGTCCCCACAGCTGGGCATAACTGGCAGAGCTGGGACTGGAACCCATCTCATTATATGCTaGTGTGCTAGACAAACCCCT +
Preference number: 4 (lower is better)
Translates to: ELPKSPQLGITGRAGTGTHLIIC*CARQTP
Trigger: AGGGGTTTGTCTAGCACACCAGCATATAATGAGATG...GGTTCCAGTCCCAGCTCTGCCAGTTATGCCCAGCTGTGGGGACTTGGGCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp CCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCCTCCCGGGCAGGCAAGGAGGTaGTTAAGGACAAGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: PNVAAPTPWMQKSSHLPPGQARR*LRTRPS
Trigger: AGAAGGCCTTGTCCTTAACCACCTCCTTGCCTGCCC...GGGAGGAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp CCCCTCCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCGGGGATAGGATGACCTaGGGGAGGTTCTTTCAGCAC +
Preference number: 4 (lower is better)
Translates to: PLQMWLHPLPGCKSHLIFGDRMT*GRFFQH
Trigger: GTGCTGAAAGAACCTCCCCCAGGTCATCCTATCCCC...GAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp ATCACAAGTCAGCAAACTTTTTCTGTGAAGACAGTGACCCTTGCCCTCACCAGGCTGCTGTGGGGAGTCTaGAGTCCCCAGCGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: ITSQQTFSVKTVTLALTRLLWGV*SPQRSA
Trigger: TGCAGAGCGCTGGGGACTCCAGACTCCCCACAGCAG...CCTGGTGAGGGCAAGGGTCACTGTCTTCACAGAAAAAGTTTGCTGACTTGTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp AACAGAGGCCCACTAAGCTGGGCTGTGTTACGGATGAGACCAGGGGAGGCCACATACTGCACATGGATCTaGCATGTCTTCCAGGTGCTT +
Preference number: 4 (lower is better)
Translates to: NRGPLSWAVLRMRPGEATYCTWI*HVFQVL
Trigger: AAGCACCTGGAAGACATGCCAGATCCATGTGCAGTA...TGTGGCCTCCCCTGGTCTCATCCGTAACACAGCCCAGCTTAGTGGGCCTCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp AAAGGCCTGCACCTGACAGCACAATGTATGGAGTGGGGTCCCCAAGACCTCTTCGCACAATGTATGGAGTaGGGTCCCCAAGACCTCTTC +
Preference number: 4 (lower is better)
Translates to: KGLHLTAQCMEWGPQDLFAQCME*GPQDLF
Trigger: GAAGAGGTCTTGGGGACCCCACTCCATACATTGTGC...GAAGAGGTCTTGGGGACCCCACTCCATACATTGTGCTGTCAGGTGCAGGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558752.1
3UTR CAA 72 bp CCACCACCCACCAAGTTGCCCATCTCAGAGATGAGGTaGCATCAAGTAAAGCCCATCCCCTCCAAATGTGGC +
Preference number: 4 (lower is better)
Translates to: PPPTKLPISEMR*HQVKPIPSKCG
Trigger: GCCACATTTGGAGGGGATGGGCTTTACTTGATGCAACCTCATCTCTGAGATGGGCAACTTGGTGGGTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp TCCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCCTCCCCCAGTCGAGGCAGGTaGGAAAGCCAGCTGACTTTA +
Preference number: 4 (lower is better)
Translates to: SKCGCTHSLDAKVISSSSPSRGR*ESQLTL
Trigger: TAAAGTCAGCTGGCTTTCTCACCTGCCTCGACTGGG...GGAGGAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
CDS-3UTR TCA 90 bp CATCAAGTAAAGCCCATCCCCTCCAAATGTGGCTGCACCCACTCCCTGGATGCAGGCCATCTACTAACGTaGGCAGTGAGCTCTCCTTAT +
Preference number: 4 (lower is better)
Translates to: HQVKPIPSKCGCTHSLDAGHLLT*AVSSPY
Trigger: ATAAGGAGAGCTCACTGCTCACGTTAGTAGATGGCC...TGCATCCAGGGAGTGGGTGCAGCCACATTTGGAGGGGATGGGCTTTACTTGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp CTGAAAACATCAACCCCGTGCCTTAACTCTCAACAACCACCGAGGAAGTTCAGGTCTCCACTTTACAGGTaGGGACACGGGCTCAGACGC +
Preference number: 4 (lower is better)
Translates to: LKTSTPCLNSQQPPRKFRSPLYR*GHGLRR
Trigger: GCGTCTGAGCCCGTGTCCTCACCTGTAAAGTGGAGA...CCTGAACTTCCTCGGTGGTTGTTGAGAGTTAAGGCACGGGGTTGATGTTTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000431533.6
ENST00000558752.1
CDS-3UTR TCA 90 bp CCTGAGACAGGAGGATCACTAGCCAACAGACTGCGTTTGTTGCTGCCACTGAGTAAGGACCCTTGGCTCTaGGGCAGTTCCAATCAAGGA +
Preference number: 4 (lower is better)
Translates to: PETGGSLANRLRLLLPLSKDPWL*GSSNQG
Trigger: TCCTTGATTGGAACTGCCTCAGAGCCAAGGGTCCTT...ACTCAGTGGCAGCAACAAACGCAGTCTGTTGGCTAGTGATCCTCCTGTCTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428193.6
CDS-3UTR GCA 90 bp CACAAGTCAGCAAACTTTTTCTGTGAAGACAGTGACCCTTGCCCTCACCAGGGAGAAGACAGTGACCCTTaGCCTCACCAGGGACAAGGC +
Preference number: 4 (lower is better)
Translates to: HKSANFFCEDSDPCPHQGEDSDP*PHQGQG
Trigger: GCCTTGTCCCTGGTGAGGGCAAGGGTCACTGTCTTC...TCCCTGGTGAGGGCAAGGGTCACTGTCTTCACAGAAAAAGTTTGCTGACTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
CDS-3UTR GCA 90 bp CACAAGTCAGCAAACTTTTTCTGTGAAGACAGTGACCCTTGCCCTCACCAGGGACCCTCCAAATGTGGCTaGACCCACTCCCTGGATGCA +
Preference number: 4 (lower is better)
Translates to: HKSANFFCEDSDPCPHQGPSKCG*THSLDA
Trigger: TGCATCCAGGGAGTGGGTGCAGCCACATTTGGAGGG...TCCCTGGTGAGGGCAAGGGTCACTGTCTTCACAGAAAAAGTTTGCTGACTTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
CDS-3UTR GCA 90 bp TCTTCTGAATGGAAGCCACTGCCCCAGCTGGGATTCTTCAGGCCACCTCACAATGCCACCAGGCATTACTaGACATGGATCTGGCATGTC +
Preference number: 4 (lower is better)
Translates to: SSEWKPLPQLGFFRPPHNATRHY*TWIWHV
Trigger: GACATGCCAGATCCATGTGCAGTAATGCCTGGTGGC...ATTGTGAGGTGGCCTGAAGAATCCCAGCTGGGGCAGTGGCTTCCATTCAGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR GCA 90 bp GAGACAGGAGGATCACTAGCCAACAGACTGCGTTTGTTGCTGCCACTGAGTAAAAACGGGGTCCCCAAGTaGCAAGCAATTGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ETGGSLANRLRLLLPLSKNGVPK*QAIGCS
Trigger: GGAGCAGCCAATTGCTTGGCACTTGGGGACCCCGTT...TTTACTCAGTGGCAGCAACAAACGCAGTCTGTTGGCTAGTGATCCTCCTGTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000428193.6
CDS-3UTR CCA 90 bp ATCTCAGAGATGAGGTTGCATCAAGTAAAGCCCATCCCCTCCAAATGTGGCTGCCATCCCCTCCAAATGTaGCTGCACCCACTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: ISEMRLHQVKPIPSKCGCHPLQM*LHPLPG
Trigger: TCCAGGGAGTGGGTGCAGCCACATTTGGAGGGGATG...GCAGCCACATTTGGAGGGGATGGGCTTTACTTGATGCAACCTCATCTCTGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
CDS-3UTR CCA 90 bp GACCTCTTCTCTAACCTACACAGGCAAAATGGGAATCAAATGGCTGCAACCAACGGATGCCCGCCGCGATaGCAGTTACCGCTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: DLFSNLHRQNGNQMAATNGCPPR*QLPLFL
Trigger: CAGGAAGAGCGGTAACTGCCATCGCGGCGGGCATCC...GTTGGTTGCAGCCATTTGATTCCCATTTTGCCTGTGTAGGTTAGAGAAGAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000558752.1
CDS-3UTR CCA 90 bp CTAAGTGTGGTAGCGAGGGCCCCTCCCCTGTTGTGCCTCAATCTTCCCACCTGTCCTACACAGGCAAAATaGGAATCAAATGGCTGCAAC +
Preference number: 4 (lower is better)
Translates to: LSVVARAPPLLCLNLPTCPTQAK*ESNGCN
Trigger: GTTGCAGCCATTTGATTCCCATTTTGCCTGTGTAGG...ACAGGTGGGAAGATTGAGGCACAACAGGGGAGGGGCCCTCGCTACCACACTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558752.1
3UTR CAA 72 bp GAGACAGGAGGATCACTAGCCAACAGACTGCGTTTGTaGCTGCCACTGAGTAAAAGGACCCTTGGCTCTGAG +
Preference number: 4 (lower is better)
Translates to: ETGGSLANRLRL*LPLSKRTLGSE
Trigger: CTCAGAGCCAAGGGTCCTTTTACTCAGTGGCAGCAACAAACGCAGTCTGTTGGCTAGTGATCCTCCTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428193.6
3UTR CAA 72 bp CCTGAGACAGGAGGATCACTAGCCAACAGACTGCGTTaGTTGCTGCCACTGAGTAAAAGGACCCTTGGCTCT +
Preference number: 4 (lower is better)
Translates to: PETGGSLANRLR*LLPLSKRTLGS
Trigger: AGAGCCAAGGGTCCTTTTACTCAGTGGCAGCAACAAACGCAGTCTGTTGGCTAGTGATCCTCCTGTCTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000428193.6
CDS-3UTR TCA 90 bp GGATTCTTCAGGCCACCTCACAATGGGACAGTAGGTCTCAATCACAAGTCAGCAGGAACCCAGGCAGTTTaGTTCCTGGCTTCCGTGAAC +
Preference number: 4 (lower is better)
Translates to: GFFRPPHNGTVGLNHKSAGTQAV*FLASVN
Trigger: GTTCACGGAAGCCAGGAATCAAACTGCCTGGGTTCC...TGCTGACTTGTGATTGAGACCTACTGTCCCATTGTGAGGTGGCCTGAAGAATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp GAGACAGGAGGATCACTAGCCAACAGACTGCGTTTGTTGCTGCCACTGAGTAAACGGCAATCCAAGAGGTaGAAGCTTTCAGGACTCCCC +
Preference number: 4 (lower is better)
Translates to: ETGGSLANRLRLLLPLSKRQSKR*KLSGLP
Trigger: GGGGAGTCCTGAAAGCTTTCACCTCTTGGATTGCCG...TTTACTCAGTGGCAGCAACAAACGCAGTCTGTTGGCTAGTGATCCTCCTGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000428193.6
CDS-3UTR GCA 90 bp CTGGTTCCTCCACCCCAACCCACCGATAGCATTCAGATACCAGACGTGGCCTCCGGTGTCTCATTATGTTaGCTAGGATGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: LVPPPQPTDSIQIPDVASGVSLC*LGWSQT
Trigger: AGTTTGAGACCATCCTAGGCAACATAATGAGACACC...GGAGGCCACGTCTGGTATCTGAATGCTATCGGTGGGTTGGGGTGGAGGAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR GCA 90 bp CAAAATGGGAATCAAATGGCTGCAACCAACCCAGCCTGTCCCCTCCTAAGTGTGTGGGAATCAAATGGCTaGAACCAACCCAGCCTGTCC +
Preference number: 4 (lower is better)
Translates to: QNGNQMAATNPACPLLSVWESNG*NQPSLS
Trigger: GGACAGGCTGGGTTGGTTGCAGCCATTTGATTCCCA...CACACTTAGGAGGGGACAGGCTGGGTTGGTTGCAGCCATTTGATTCCCATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000558752.1
CDS-3UTR CCA 90 bp CCCCTCCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCCAGGCCACCTCACAATaGGACAGTAGGTCTCAATCA +
Preference number: 4 (lower is better)
Translates to: PLQMWLHPLPGCKSHLIFQATSQ*DSRSQS
Trigger: TGATTGAGACCTACTGTCCCATTGTGAGGTGGCCTG...GAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
CDS-3UTR CCA 90 bp TCCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCCTCCCAGCCTGCACCCTTCTaGGCTAGAAAAGGCCTTTCT +
Preference number: 4 (lower is better)
Translates to: SKCGCTHSLDAKVISSSSQPAPF*ARKGLS
Trigger: AGAAAGGCCTTTTCTAGCCCAGAAGGGTGCAGGCTG...GGAGGAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
CDS-3UTR CCA 90 bp CACATGGATCTGGCATGTCTTCCAGGTGCTTGGGAAACACGAGCATTAGTTTGTCATCCCCTCCAAATGTaGCTGCACCCACTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: HMDLACLPGAWETRALVCHPLQM*LHPLPG
Trigger: TCCAGGGAGTGGGTGCAGCCACATTTGGAGGGGATG...ACAAACTAATGCTCGTGTTTCCCAAGCACCTGGAAGACATGCCAGATCCATGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp TCCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCCTCCAGAGGCCCACTAAGCTaGGCTGTGTTACGGATGAGA +
Preference number: 4 (lower is better)
Translates to: SKCGCTHSLDAKVISSSSRGPLS*AVLRMR
Trigger: TCTCATCCGTAACACAGCCCAGCTTAGTGGGCCTCT...GGAGGAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp CATTACTGCACATGGATCTGGCATGTCTTCCAGGTGCTTGGGAAACACGAGCATCATAACTGGCAGAGCTaGGACTGGAACCCAGGCAGT +
Preference number: 4 (lower is better)
Translates to: HYCTWIWHVFQVLGKHEHHNWQS*DWNPGS
Trigger: ACTGCCTGGGTTCCAGTCCCAGCTCTGCCAGTTATG...ATGCTCGTGTTTCCCAAGCACCTGGAAGACATGCCAGATCCATGTGCAGTAATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp CCCCAGCTGGGATTCTTCAGGCCACCTCACAATGGGACAGTAGGTCTCAATCACATGGCCTTTTACATATaGGAAACTGAGGCACGGTGC +
Preference number: 4 (lower is better)
Translates to: PQLGFFRPPHNGTVGLNHMAFYI*ETEARC
Trigger: GCACCGTGCCTCAGTTTCCCATATGTAAAAGGCCAT...GTGATTGAGACCTACTGTCCCATTGTGAGGTGGCCTGAAGAATCCCAGCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp CCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCCTCCCGGCTGGAAATGCAGCTaGGGACAGAATGATATTCAC +
Preference number: 4 (lower is better)
Translates to: PNVAAPTPWMQKSSHLPPGWKCS*GQNDIH
Trigger: GTGAATATCATTCTGTCCTCAGCTGCATTTCCAGCC...GGGAGGAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp GCCTTAACTCTCAACAACCACCGAGGAAGTTCAGGTCCTTTTTCATTTCTCCACTCTCCACTTTACAGGTaGGGACACGGGCTCAGACGC +
Preference number: 4 (lower is better)
Translates to: ALTLNNHRGSSGPFSFLHSPLYR*GHGLRR
Trigger: GCGTCTGAGCCCGTGTCCTCACCTGTAAAGTGGAGA...GTGGAGAAATGAAAAAGGACCTGAACTTCCTCGGTGGTTGTTGAGAGTTAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000431533.6
ENST00000558752.1
CDS-3UTR TCA 90 bp TTCAGGGAATCCCCAAAAAGGCCTGCACCTGACAGCACAATGTATGGAGTGGGGAAAAAGGCCTGCACCTaGCAGCACAATGTATGGAGT +
Preference number: 4 (lower is better)
Translates to: FRESPKRPAPDSTMYGVGKKACT*QHNVWS
Trigger: ACTCCATACATTGTGCTGTCAGGTGCAGGCCTTTTT...CCCCACTCCATACATTGTGCTGTCAGGTGCAGGCCTTTTTGGGGATTCCCTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000558752.1
CDS-3UTR TCA 90 bp CTAGCCAACAGACTGCGTTTGTTGCTGCCACTGAGTAAAAGGACCCTTGGCTCTGTTTGTTGCTGCCACTaGGTAAAAGGACCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LANRLRLLLPLSKRTLGSVCCCH*VKGPLA
Trigger: AGCCAAGGGTCCTTTTACTCAGTGGCAGCAACAAAC...AGAGCCAAGGGTCCTTTTACTCAGTGGCAGCAACAAACGCAGTCTGTTGGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428193.6
CDS-3UTR GCA 90 bp TCCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCCTCCTGGGCTGCAAATCAGTaGTGTGGAGGACAACTGAAG +
Preference number: 4 (lower is better)
Translates to: SKCGCTHSLDAKVISSSSWAANQ*CGGQLK
Trigger: CTTCAGTTGTCCTCCACAGCACTGATTTGCAGCCCA...GGAGGAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR GCA 90 bp ATCACAAGTCAGCAAACTTTTTCTGTGAAGACAGTGACCCTTGCCCTCACCAGGTGCCAGCTTGTGGGCTaGAAATCAGTGCTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: ITSQQTFSVKTVTLALTRCQLVG*KSVLWR
Trigger: CCTCCACAGCACTGATTTGCAGCCCACAAGCTGGCA...CCTGGTGAGGGCAAGGGTCACTGTCTTCACAGAAAAAGTTTGCTGACTTGTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR GCA 90 bp ACCTCTTCTCTAACCTACACAGGCAAAATGGGAATCAAATGGCTGCAACCAACCGCCCCTCCCCTGTTGTaGCTCAATCTTCCCACCTGT +
Preference number: 4 (lower is better)
Translates to: TSSLTYTGKMGIKWLQPTAPPLL*LNLPTC
Trigger: ACAGGTGGGAAGATTGAGGCACAACAGGGGAGGGGC...GGTTGGTTGCAGCCATTTGATTCCCATTTTGCCTGTGTAGGTTAGAGAAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000558752.1
CDS-3UTR CCA 90 bp ACAGTAGGTCTCAATCACAAGTCAGCAAACTTTTTCTGTGAAGACAGTGACCCTGCCACACAGACAGGCTaGCCACCCGCAGGAACAGAG +
Preference number: 4 (lower is better)
Translates to: TVGLNHKSANFFCEDSDPATQTG*PPAGTE
Trigger: CTCTGTTCCTGCGGGTGGCCAGCCTGTCTGTGTGGC...AGGGTCACTGTCTTCACAGAAAAAGTTTGCTGACTTGTGATTGAGACCTACTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp CACATGGATCTGGCATGTCTTCCAGGTGCTTGGGAAACACGAGCATTAGTTTGTGTTTGCTCAGCACACTaGGGACTCCAAACTCTGTGG +
Preference number: 4 (lower is better)
Translates to: HMDLACLPGAWETRALVCVCSAH*GLQTLW
Trigger: CCACAGAGTTTGGAGTCCTCAGTGTGCTGAGCAAAC...ACAAACTAATGCTCGTGTTTCCCAAGCACCTGGAAGACATGCCAGATCCATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp CACATGGATCTGGCATGTCTTCCAGGTGCTTGGGAAACACGAGCATTAGTTTGTGAGAAACAGGGGAATTaGTACCATTCCTGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: HMDLACLPGAWETRALVCEKQGN*YHSWAA
Trigger: CGCTGCCCAGGAATGGTATCAATTCCCCTGTTTCTC...ACAAACTAATGCTCGTGTTTCCCAAGCACCTGGAAGACATGCCAGATCCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR GCA 90 bp CACAATGGGACAGTAGGTCTCAATCACAAGTCAGCAAACTTTTTCTGTGAAGACCAAGTCCCCAAACCGTaGTACAGCACCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: HNGTVGLNHKSANFFCEDQVPKP*YSTRAQ
Trigger: CTGGGCCCTGGTGCTGTAGCACGGTTTGGGGACTTG...GTCTTCACAGAAAAAGTTTGCTGACTTGTGATTGAGACCTACTGTCCCATTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
CDS-3UTR GCA 90 bp CACATGGATCTGGCATGTCTTCCAGGTGCTTGGGAAACACGAGCATTAGTTTGTGCTGTACCCTGGGGCTaGCATCTCCCTTACAGTTAT +
Preference number: 4 (lower is better)
Translates to: HMDLACLPGAWETRALVCAVPWG*HLPYSY
Trigger: ATAACTGTAAGGGAGATGGCAGCCCCAGGGTACAGC...ACAAACTAATGCTCGTGTTTCCCAAGCACCTGGAAGACATGCCAGATCCATGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR GCA 90 bp CACAATGGGACAGTAGGTCTCAATCACAAGTCAGCAAACTTTTTCTGTGAAGACAGGCTGCTCAATGCCTaGTGGCTGTACCCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: HNGTVGLNHKSANFFCEDRLLNA*WLYPGA
Trigger: AGCCCCAGGGTACAGCCAGCAGGCATTGAGCAGCCT...GTCTTCACAGAAAAAGTTTGCTGACTTGTGATTGAGACCTACTGTCCCATTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR GCA 90 bp ATCTCAGAGATGAGGTTGCATCAAGTAAAGCCCATCCCCTCCAAATGTGGCTGCGCTAGACAAACCCCTTaGCCACCAGCACAAGACAAA +
Preference number: 4 (lower is better)
Translates to: ISEMRLHQVKPIPSKCGCARQTP*PPAQDK
Trigger: TTTGTCTTGTGCTGGTGGGCAAGGGGTTTGTCTAGC...GCAGCCACATTTGGAGGGGATGGGCTTTACTTGATGCAACCTCATCTCTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR GCA 90 bp CACAATGGGACAGTAGGTCTCAATCACAAGTCAGCAAACTTTTTCTGTGAAGACCTGAGCTGGGAATGCTaGCGGGCATCACTCTTGGGG +
Preference number: 4 (lower is better)
Translates to: HNGTVGLNHKSANFFCEDLSWEC*RASLLG
Trigger: CCCCAAGAGTGATGCCCGGCAGCATTCCCAGCTCAG...GTCTTCACAGAAAAAGTTTGCTGACTTGTGATTGAGACCTACTGTCCCATTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp ATCTCAGAGATGAGGTTGCATCAAGTAAAGCCCATCCCCTCCAAATGTGGCTGCCAGGCCACCTCACAATaGGACAGTAGGTCTCAATCA +
Preference number: 4 (lower is better)
Translates to: ISEMRLHQVKPIPSKCGCQATSQ*DSRSQS
Trigger: TGATTGAGACCTACTGTCCCATTGTGAGGTGGCCTG...GCAGCCACATTTGGAGGGGATGGGCTTTACTTGATGCAACCTCATCTCTGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
CDS-3UTR CCA 90 bp CACAATGGGACAGTAGGTCTCAATCACAAGTCAGCAAACTTTTTCTGTGAAGACCCCACTGCCTGGGCCTaGTTTCTGATGAGGGCAGCT +
Preference number: 4 (lower is better)
Translates to: HNGTVGLNHKSANFFCEDPTAWA*FLMRAA
Trigger: AGCTGCCCTCATCAGAAACCAGGCCCAGGCAGTGGG...GTCTTCACAGAAAAAGTTTGCTGACTTGTGATTGAGACCTACTGTCCCATTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp TGTCCTGTGAACAGAGGATGCCTCAGTCCCGAGTCTCTGCTGCTGTGGGGAGTCGAAAGGCACTCAAAATaGCCTTTTACATATGGGAAA +
Preference number: 4 (lower is better)
Translates to: CPVNRGCLSPESLLLWGVERHSK*PFTYGK
Trigger: TTTCCCATATGTAAAAGGCCATTTTGAGTGCCTTTC...GACTCCCCACAGCAGCAGAGACTCGGGACTGAGGCATCCTCTGTTCACAGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CAA 72 bp GCACAAGACAAACATGAGACAGATAAACCTGCCAGCTaGTGGGCTGCAAATCAGTGCTGTGGAGGACAACTG +
Preference number: 4 (lower is better)
Translates to: AQDKHETDKPAS*WAANQCCGGQL
Trigger: CAGTTGTCCTCCACAGCACTGATTTGCAGCCCACAAGCTGGCAGGTTTATCTGTCTCATGTTTGTCTTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp TCCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCCTCCGGGACCTTCTGTATGTaGCAAGACGCTTTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: SKCGCTHSLDAKVISSSSGTFCM*QDAFLL
Trigger: CAAAAGAAAAGCGTCTTGTCACATACAGAAGGTCCC...GGAGGAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp CTAGCCAACAGACTGCGTTTGTTGCTGCCACTGAGTAAAAGGACCCTTGGCTCTTTCCAATCAAGGACCTaGGAAAAACTCACTCGGATC +
Preference number: 4 (lower is better)
Translates to: LANRLRLLLPLSKRTLGSFQSRT*EKLTRI
Trigger: GATCCGAGTGAGTTTTTCTCAGGTCCTTGATTGGAA...AGAGCCAAGGGTCCTTTTACTCAGTGGCAGCAACAAACGCAGTCTGTTGGCTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000428193.6
CDS-3UTR GCA 90 bp GGATTCTTCAGGCCACCTCACAATGGGACAGTAGGTCTCAATCACAAGTCAGCACACCCACTCCCTGGATaGAAAAGTCATCTCATCTTC +
Preference number: 4 (lower is better)
Translates to: GFFRPPHNGTVGLNHKSAHPLPG*KSHLIF
Trigger: GAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTG...TGCTGACTTGTGATTGAGACCTACTGTCCCATTGTGAGGTGGCCTGAAGAATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
CDS-3UTR GCA 90 bp GGCCACACAGCAGGGAGGATTCAGATAGGGATGGAGAAAGCCAGCAGGACTCCACAGTCAAGCAGGTTTTaGACATTTAATCTTCTCATC +
Preference number: 4 (lower is better)
Translates to: GHTAGRIQIGMEKASRTPQSSRF*TFNLLI
Trigger: GATGAGAAGATTAAATGTGCAAAACCTGCTTGACTG...TGGAGTCCTGCTGGCTTTCTCCATCCCTATCTGAATCCTCCCTGCTGTGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp ATCACAAGTCAGCAAACTTTTTCTGTGAAGACAGTGACCCTTGCCCTCACCAGGTCACCATGCAGCTACTaGACTAAGAGCTGGAGAGAC +
Preference number: 4 (lower is better)
Translates to: ITSQQTFSVKTVTLALTRSPCSY*TKSWRD
Trigger: GTCTCTCCAGCTCTTAGTCCAGTAGCTGCATGGTGA...CCTGGTGAGGGCAAGGGTCACTGTCTTCACAGAAAAAGTTTGCTGACTTGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp ACACGAACATTCAGGGAATCCCCAAAAAGGCCTGCACCTGACAGCACAATGTATCAATCTTCCCACCTGTaGGATGAAACCATCCATCCC +
Preference number: 4 (lower is better)
Translates to: TRTFRESPKRPAPDSTMYQSSHL*DETIHP
Trigger: GGGATGGATGGTTTCATCCCACAGGTGGGAAGATTG...ATACATTGTGCTGTCAGGTGCAGGCCTTTTTGGGGATTCCCTGAATGTTCGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000558752.1
CDS-3UTR CCA 90 bp CTCACACGAACATTCAGGGAATCCCCAAAAAGGCCTGCACCTGACAGCACAATGAAAATGGGAATCAAATaGCTGCAACCAACCCAGCCT +
Preference number: 4 (lower is better)
Translates to: LTRTFRESPKRPAPDSTMKMGIK*LQPTQP
Trigger: AGGCTGGGTTGGTTGCAGCCATTTGATTCCCATTTT...CATTGTGCTGTCAGGTGCAGGCCTTTTTGGGGATTCCCTGAATGTTCGTGTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000558752.1
CDS-3UTR TCA 90 bp ATCACAAGTCAGCAAACTTTTTCTGTGAAGACAGTGACCCTTGCCCTCACCAGGCAGCTGAGGACAGAATaGTATTCACAAACACGGGCA +
Preference number: 4 (lower is better)
Translates to: ITSQQTFSVKTVTLALTRQLRTE*YSQTRA
Trigger: TGCCCGTGTTTGTGAATATCATTCTGTCCTCAGCTG...CCTGGTGAGGGCAAGGGTCACTGTCTTCACAGAAAAAGTTTGCTGACTTGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp AGGCAAAATGGGAATCAAATGGCTGCAACCAACCCAGCCTGTCCCCTCCTAAGTTTTGAGAATTTCATCTaGAAACATCAACCCCGTGCC +
Preference number: 4 (lower is better)
Translates to: RQNGNQMAATNPACPLLSFENFI*KHQPRA
Trigger: GGCACGGGGTTGATGTTTTCAGATGAAATTCTCAAA...ACTTAGGAGGGGACAGGCTGGGTTGGTTGCAGCCATTTGATTCCCATTTTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000558752.1
CDS-3UTR GCA 90 bp CCCTCCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCCAAGCATCTCATTATATaGTGGTGTGCTAGACAAACC +
Preference number: 4 (lower is better)
Translates to: PSKCGCTHSLDAKVISSSKHLII*WCARQT
Trigger: GGTTTGTCTAGCACACCAGCATATAATGAGATGCTT...GGAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR TCA 90 bp CCACCTCACAATGGGACAGTAGGTCTCAATCACAAGTCAGCAAACTTTTTCTGTTTTGATGACATGGCCTaGATGACAACACACAGGGCC +
Preference number: 4 (lower is better)
Translates to: PPHNGTVGLNHKSANFFCFDDMA*MTTHRA
Trigger: GGCCCTGTGTGTTGTCATTCAGGCCATGTCATCAAA...ACAGAAAAAGTTTGCTGACTTGTGATTGAGACCTACTGTCCCATTGTGAGGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
CDS-3UTR CCA 90 bp TCCCCTCCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTAACTCTCAGGACCGGTaGGCTTTATACATTCAATAT +
Preference number: 4 (lower is better)
Translates to: SPPNVAAPTPWMQKSSHLNSQDR*ALYIQY
Trigger: ATATTGAATGTATAAAGCCCACCGGTCCTGAGAGTT...AAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
3UTR CAA 72 bp CATCTCCCTTACAGTTATAAGCCACCACCCACCAAGTaGCCCATCTCAGAGATGAGGTTGCATCAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: HLPYSYKPPPTK*PISEMRLHQVK
Trigger: CTTTACTTGATGCAACCTCATCTCTGAGATGGGCAACTTGGTGGGTGGTGGCTTATAACTGTAAGGGAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp CATTACTGCACATGGATCTGGCATGTCTTCCAGGTGCTTGGGAAACACGAGCATTGTTTTTGGTTTAACTaGTTTTCCAATTTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: HYCTWIWHVFQVLGKHEHCFWFN*FSNFQA
Trigger: GGCCTGGAAATTGGAAAACCAGTTAAACCAAAAACA...ATGCTCGTGTTTCCCAAGCACCTGGAAGACATGCCAGATCCATGTGCAGTAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CCA 90 bp CACAATGGGACAGTAGGTCTCAATCACAAGTCAGCAAACTTTTTCTGTGAAGACTGTCTTCCAGGTGCTTaGGAAACACGAGCATTAGTT +
Preference number: 4 (lower is better)
Translates to: HNGTVGLNHKSANFFCEDCLPGA*ETRALV
Trigger: AACTAATGCTCGTGTTTCCCAAGCACCTGGAAGACA...GTCTTCACAGAAAAAGTTTGCTGACTTGTGATTGAGACCTACTGTCCCATTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS GCA 90 bp CCGAGAGGGAAGCCGGTACCCAGACCAACACCCTGGCGCCAGGGATaGCCGCCGCGATGGCAGTTACCGCTCTTCCTGCCGGATCTCCGC +
Preference number: 5 (lower is better)
Translates to: PRGKPVPRPTPWRQG*PPRWQLPLFLPDLR
Trigger: GCGGAGATCCGGCAGGAAGAGCGGTAACTGCCATCGCGGCGGGCATCCCTGGCGCCAGGGTGTTGGTCTGGGTACCGGCTTCCCTCTCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558752.1
CDS GCA 90 bp AGGCGTCCTGGTCTAGGCTGGTGCTCCAGGCTGCTTACAGCCTGCTaGCTCCCAACCCTTCCCGCAAGCATGCGCAGGTCGGGGCGGTAC +
Preference number: 5 (lower is better)
Translates to: RRPGLGWCSRLLTAC*LPTLPASMRRSGRY
Trigger: GTACCGCCCCGACCTGCGCATGCTTGCGGGAAGGGTTGGGAGGCAGCAGGCTGTAAGCAGCCTGGAGCACCAGCCTAGACCAGGACGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560055.5
CDS GCA 90 bp CTGGCTGCGGTGTTGCTGAGGTGGAGGCGTCCTGGTCTAGGCTGGTaGTCCAGGCTGCTTACAGCCTGCTGCCTCCCAACCCTTCCCGCA +
Preference number: 5 (lower is better)
Translates to: LAAVLLRWRRPGLGW*SRLLTACCLPTLPA
Trigger: TGCGGGAAGGGTTGGGAGGCAGCAGGCTGTAAGCAGCCTGGAGCACCAGCCTAGACCAGGACGCCTCCACCTCAGCAACACCGCAGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560055.5
CDS CCA 90 bp GACCTGGCTGCGGTGTTGCTGAGGTGGAGGCGTCCTGGTCTAGGCTaGTGCTCCAGGCTGCTTACAGCCTGCTGCCTCCCAACCCTTCCC +
Preference number: 5 (lower is better)
Translates to: DLAAVLLRWRRPGLG*CSRLLTACCLPTLP
Trigger: GGGAAGGGTTGGGAGGCAGCAGGCTGTAAGCAGCCTGGAGCACCAGCCTAGACCAGGACGCCTCCACCTCAGCAACACCGCAGCCAGGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560055.5
CDS CCA 90 bp CCGGTACCCAGACCAACACCCTGGCGCCAGGGATGCCCGCCGCGATaGCAGTTACCGCTCTTCCTGCCGGATCTCCGCTTAATGACCACC +
Preference number: 5 (lower is better)
Translates to: PVPRPTPWRQGCPPR*QLPLFLPDLRLMTT
Trigger: GGTGGTCATTAAGCGGAGATCCGGCAGGAAGAGCGGTAACTGCCATCGCGGCGGGCATCCCTGGCGCCAGGGTGTTGGTCTGGGTACCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558752.1
CDS TCA 90 bp CCTTTAGCACACCTCGCAGGTGTGGACAGTCTCACATTGAGAAGCTaGGCAGCGTGGGCCCGTGGCGGGTGCCTGGGCAGGCCAGCAGGT +
Preference number: 5 (lower is better)
Translates to: PLAHLAGVDSLTLRS*AAWARGGCLGRPAG
Trigger: ACCTGCTGGCCTGCCCAGGCACCCGCCACGGGCCCACGCTGCTCAGCTTCTCAATGTGAGACTGTCCACACCTGCGAGGTGTGCTAAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426763.3
ENST00000560881.5
CDS-3UTR CAA 90 bp GAGCTGCCCAAGTCCCCACAGCTGGGCATAACTGGCAGAGCTGGGACTGGAACCGTCGTCCCCCAGGTCTaGGGAACACCCCAAGTCCCC +
Preference number: 5 (lower is better)
Translates to: ELPKSPQLGITGRAGTGTVVPQV*GTPQVP
Trigger: GGGGACTTGGGGTGTTCCCAAGACCTGGGGGACGAC...GGTTCCAGTCCCAGCTCTGCCAGTTATGCCCAGCTGTGGGGACTTGGGCAGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS CCA 90 bp GATGGCTCCATGACACAGAATGACCTGGCTGCGGTGTTGCTGAGGTaGAGGCGTCCTGGTCTAGGCTGGTGCTCCAGGCTGCTTACAGCC +
Preference number: 5 (lower is better)
Translates to: DGSMTQNDLAAVLLR*RRPGLGWCSRLLTA
Trigger: GGCTGTAAGCAGCCTGGAGCACCAGCCTAGACCAGGACGCCTCCACCTCAGCAACACCGCAGCCAGGTCATTCTGTGTCATGGAGCCATC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560055.5
CDS-3UTR CAA 90 bp TTTGGGCTTGGCAGCCTTCCAGGGTGCGCCCTACGCTCACTCACCATGCAGCTAGCGCTCTGCACAACTTaGGGCTTGGCAGCCTTCCAG +
Preference number: 5 (lower is better)
Translates to: FGLGSLPGCALRSLTMQLALCTT*GLAAFQ
Trigger: CTGGAAGGCTGCCAAGCCCAAAGTTGTGCAGAGCGC...TAGCTGCATGGTGAGTGAGCGTAGGGCGCACCCTGGAAGGCTGCCAAGCCCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS TCA 90 bp GCTGCCCAAATCCTGCAGCGTACGAGATGGCTCCATGACACAGAATaGCCTGGCTGCGGTGTTGCTGAGGTGGAGGCGTCCTGGTCTAGG +
Preference number: 5 (lower is better)
Translates to: AAQILQRTRWLHDTE*PGCGVAEVEASWSR
Trigger: CCTAGACCAGGACGCCTCCACCTCAGCAACACCGCAGCCAGGTCATTCTGTGTCATGGAGCCATCTCGTACGCTGCAGGATTTGGGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560055.5
CDS GCA 90 bp GCCTGGTTGGGGGTCAGGGAGGTCCTGGGGTCAGTCCACCTAACCTaGACCTTTAGCACACCTCGCAGGTGTGGACAGTCTCACATTGAG +
Preference number: 5 (lower is better)
Translates to: AWLGVREVLGSVHLT*TFSTPRRCGQSHIE
Trigger: CTCAATGTGAGACTGTCCACACCTGCGAGGTGTGCTAAAGGTGCAGGTTAGGTGGACTGACCCCAGGACCTCCCTGACCCCCAACCAGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426763.3
ENST00000560881.5
CDS GCA 90 bp CCACTAGCATCTAGTGGGTGGAGGCCAAGGGTGCTGCCCAAATCCTaGAGCGTACGAGATGGCTCCATGACACAGAATGACCTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: PLASSGWRPRVLPKS*SVRDGSMTQNDLAA
Trigger: CGCAGCCAGGTCATTCTGTGTCATGGAGCCATCTCGTACGCTGCAGGATTTGGGCAGCACCCTTGGCCTCCACCCACTAGATGCTAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560055.5
CDS-3UTR CAA 90 bp GCCTCAGTCCCGAGTCTCTGCTGCTGTGGGGAGTCTGGAGTCCCCAGCGCTCTGAGGCAGGTGGGTAATTaGAAGTCAGGAGTTCCAAAC +
Preference number: 5 (lower is better)
Translates to: ASVPSLCCCGESGVPSALRQVGN*KSGVPN
Trigger: GTTTGGAACTCCTGACTTCAAATTACCCACCTGCCT...CAGAGCGCTGGGGACTCCAGACTCCCCACAGCAGCAGAGACTCGGGACTGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CAA 90 bp GGGCCCAGCCCTCAGCCTGCACCCTTCTGGGCTAGAAAAGGCCTTTCTTCTTCTCTGCATGGCCAGCCATaGACATCACCTCCAGATGGA +
Preference number: 5 (lower is better)
Translates to: GPSPQPAPFWARKGLSSSLHGQP*TSPPDG
Trigger: TCCATCTGGAGGTGATGTCAATGGCTGGCCATGCAG...AGAAGAAGAAAGGCCTTTTCTAGCCCAGAAGGGTGCAGGCTGAGGGCTGGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
CDS-3UTR CAA 90 bp AACAGAGGCCCACTAAGCTGGGCTGTGTTACGGATGAGACCAGGGGAGGCCACAGAGAGGTTGAGGAACTaGCCCAAGGTTGCACAGCCA +
Preference number: 5 (lower is better)
Translates to: NRGPLSWAVLRMRPGEATERLRN*PKVAQP
Trigger: TGGCTGTGCAACCTTGGGCAAGTTCCTCAACCTCTC...TGTGGCCTCCCCTGGTCTCATCCGTAACACAGCCCAGCTTAGTGGGCCTCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS TCA 90 bp TCCACAAGCCGCCCCCTAGGCCAATGCTGGGTGTGGGGAGTAGGCTaGAAGCAAGAATCCATCCCTCTCCAGCCCATATTGCAACCAGTA +
Preference number: 5 (lower is better)
Translates to: STSRPLGQCWVWGVG*KQESIPLQPILQPV
Trigger: TACTGGTTGCAATATGGGCTGGAGAGGGATGGATTCTTGCTTTCAGCCTACTCCCCACACCCAGCATTGGCCTAGGGGGCGGCTTGTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426763.3
ENST00000560583.5
CDS-3UTR CAA 90 bp AACAGAGGCCCACTAAGCTGGGCTGTGTTACGGATGAGACCAGGGGAGGCCACAATGGTGTCTCCACGTTaGCTCAGCACACTGAGGACT +
Preference number: 5 (lower is better)
Translates to: NRGPLSWAVLRMRPGEATMVSPR*LSTLRT
Trigger: AGTCCTCAGTGTGCTGAGCAAACGTGGAGACACCAT...TGTGGCCTCCCCTGGTCTCATCCGTAACACAGCCCAGCTTAGTGGGCCTCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CAA 90 bp TCCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCCTCCGGCAATCAGGAAAGCTaGGGTGACAGGGTGGCCCAG +
Preference number: 5 (lower is better)
Translates to: SKCGCTHSLDAKVISSSSGNQES*GDRVAQ
Trigger: CTGGGCCACCCTGTCACCCAAGCTTTCCTGATTGCC...GGAGGAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CAA 90 bp CAGGGAGCAGAGTCCTTCTTTGAATCGGGTACCCCAGGATGGCAGGAACCAGGGTCCTACAATCAGGATTaGTGGGCACAGTCAAGCAGG +
Preference number: 5 (lower is better)
Translates to: QGAESFFESGTPGWQEPGSYNQD*WAQSSR
Trigger: CCTGCTTGACTGTGCCCACAAATCCTGATTGTAGGA...CCCTGGTTCCTGCCATCCTGGGGTACCCGATTCAAAGAAGGACTCTGCTCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS TCA 90 bp CCCACCTGTCCATTTCACAGAGGCTCACTCGTCATCACGGAGTACTaGGGACACAGCTTCTGCCACACTCATAGCCCAATTCTGTCCACC +
Preference number: 5 (lower is better)
Translates to: PTCPFHRGSLVITEY*GHSFCHTHSPILST
Trigger: GGTGGACAGAATTGGGCTATGAGTGTGGCAGAAGCTGTGTCCTCAGTACTCCGTGATGACGAGTGAGCCTCTGTGAAATGGACAGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426763.3
ENST00000560881.5
CDS-3UTR CAA 90 bp AGCGTTTCAAAAAGGGAGGCCCAGTCGAGGCAGGTGAGAAAGCCAGCTGACTTTCTGCATGGCCAGCCATaGACATCACCTCCAGATGGA +
Preference number: 5 (lower is better)
Translates to: SVSKREAQSRQVRKPADFLHGQP*TSPPDG
Trigger: TCCATCTGGAGGTGATGTCAATGGCTGGCCATGCAG...AAAGTCAGCTGGCTTTCTCACCTGCCTCGACTGGGCCTCCCTTTTTGAAACGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
CDS-3UTR CAA 90 bp CCCCAGCTGGGATTCTTCAGGCCACCTCACAATGGGACAGTAGGTCTCAATCACTGGAACCCAGGCAGTTaGATTCCTGGCTTCCGTGAA +
Preference number: 5 (lower is better)
Translates to: PQLGFFRPPHNGTVGLNHWNPGS*IPGFRE
Trigger: TTCACGGAAGCCAGGAATCAAACTGCCTGGGTTCCA...GTGATTGAGACCTACTGTCCCATTGTGAGGTGGCCTGAAGAATCCCAGCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CAA 90 bp AGCTTGTGGGCTGCAAATCAGTGCTGTGGAGGACAACTGAAGCAGGTGCCAGGGGAAGACACAGAGAGGTaGAGGAACTTGCCCAAGGTT +
Preference number: 5 (lower is better)
Translates to: SLWAANQCCGGQLKQVPGEDTER*RNLPKV
Trigger: AACCTTGGGCAAGTTCCTCAACCTCTCTGTGTCTTC...CCCTGGCACCTGCTTCAGTTGTCCTCCACAGCACTGATTTGCAGCCCACAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CAA 90 bp TCCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCCTCCTGCAGCCTCATACTCTaGGCTCAAGTGCTCCGCTCA +
Preference number: 5 (lower is better)
Translates to: SKCGCTHSLDAKVISSSSCSLIL*AQVLRS
Trigger: TGAGCGGAGCACTTGAGCCAAGAGTATGAGGCTGCA...GGAGGAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CAA 90 bp ACAGTAGGTCTCAATCACAAGTCAGCAAACTTTTTCTGTGAAGACAGTGACCCTGTCGTCCCCCAGGTCTaGGGAACACCCCAAGTCCCC +
Preference number: 5 (lower is better)
Translates to: TVGLNHKSANFFCEDSDPVVPQV*GTPQVP
Trigger: GGGGACTTGGGGTGTTCCCAAGACCTGGGGGACGAC...AGGGTCACTGTCTTCACAGAAAAAGTTTGCTGACTTGTGATTGAGACCTACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
CDS-3UTR CAA 90 bp TCCCCTCCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTGATAAACCTGCCAGCTaGTGGGCTGCAAATCAGTGC +
Preference number: 5 (lower is better)
Translates to: SPPNVAAPTPWMQKSSHLDKPAS*WAANQC
Trigger: GCACTGATTTGCAGCCCACAAGCTGGCAGGTTTATC...AAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGAGGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CAA 90 bp CCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCCTCCCCGGTGTCTCATTATGTaGCCTAGGATGGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: PNVAAPTPWMQKSSHLPPRCLIM*PRMVSN
Trigger: GTTTGAGACCATCCTAGGCAACATAATGAGACACCG...GGGAGGAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CAA 90 bp CCCCTCCAAATGTGGCTGCACCCACTCCCTGGATGCAAAAGTCATCTCATCTTCATCTCAGAGATGAGGTaGCATCAAGTAAAGCCCATC +
Preference number: 5 (lower is better)
Translates to: PLQMWLHPLPGCKSHLIFISEMR*HQVKPI
Trigger: GATGGGCTTTACTTGATGCAACCTCATCTCTGAGAT...GAAGATGAGATGACTTTTGCATCCAGGGAGTGGGTGCAGCCACATTTGGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344063.7
ENST00000560583.5
CDS-3UTR CAA 90 bp CAGGGAGCAGAGTCCTTCTTTGAATCGGGTACCCCAGGATGGCAGGAACCAGGGCTCCCAATTTTGTCTTaGGCTTTCAGCATTTTTACT +
Preference number: 5 (lower is better)
Translates to: QGAESFFESGTPGWQEPGLPILS*AFSIFT
Trigger: AGTAAAAATGCTGAAAGCCAAAGACAAAATTGGGAG...CCCTGGTTCCTGCCATCCTGGGGTACCCGATTCAAAGAAGGACTCTGCTCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CAA 90 bp GGATTCTTCAGGCCACCTCACAATGGGACAGTAGGTCTCAATCACAAGTCAGCAAGAGAAACAGGGGAATaGATACCATTCCTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GFFRPPHNGTVGLNHKSARETGE*IPFLGS
Trigger: GCTGCCCAGGAATGGTATCAATTCCCCTGTTTCTCT...TGCTGACTTGTGATTGAGACCTACTGTCCCATTGTGAGGTGGCCTGAAGAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CAA 90 bp CTAGCCAACAGACTGCGTTTGTTGCTGCCACTGAGTAAAAGGACCCTTGGCTCTAACAGACTGCGTTTGTaGCTGCCACTGAGTAAAAGG +
Preference number: 5 (lower is better)
Translates to: LANRLRLLLPLSKRTLGSNRLRL*LPLSKR
Trigger: CCTTTTACTCAGTGGCAGCAACAAACGCAGTCTGTT...AGAGCCAAGGGTCCTTTTACTCAGTGGCAGCAACAAACGCAGTCTGTTGGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000428193.6
CDS-3UTR CAA 90 bp GGCCACACAGCAGGGAGGATTCAGATAGGGATGGAGAAAGCCAGCAGGACTCCATTTGTTCTCCCAATTTaGTCTTTGGCTTTCAGCATT +
Preference number: 5 (lower is better)
Translates to: GHTAGRIQIGMEKASRTPFVLPI*SLAFSI
Trigger: AATGCTGAAAGCCAAAGACAAAATTGGGAGAACAAA...TGGAGTCCTGCTGGCTTTCTCCATCCCTATCTGAATCCTCCCTGCTGTGTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS-3UTR CAA 90 bp CACAATGGGACAGTAGGTCTCAATCACAAGTCAGCAAACTTTTTCTGTGAAGACCCTCTCCAGCCCATATaGCAACCAGTAGTGGGAGGC +
Preference number: 5 (lower is better)
Translates to: HNGTVGLNHKSANFFCEDPLQPI*QPVVGG
Trigger: GCCTCCCACTACTGGTTGCAATATGGGCTGGAGAGG...GTCTTCACAGAAAAAGTTTGCTGACTTGTGATTGAGACCTACTGTCCCATTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560583.5
CDS-3UTR CAA 90 bp ATCACAAGTCAGCAAACTTTTTCTGTGAAGACAGTGACCCTTGCCCTCACCAGGATGTCTTCCAGGTGCTaGGGAAACACGAGCATTAGT +
Preference number: 5 (lower is better)
Translates to: ITSQQTFSVKTVTLALTRMSSRC*GNTSIS
Trigger: ACTAATGCTCGTGTTTCCCAAGCACCTGGAAGACAT...CCTGGTGAGGGCAAGGGTCACTGTCTTCACAGAAAAAGTTTGCTGACTTGTGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000344063.7
CDS GCA 72 bp AAGCCGGTACCCAGACCAACACCCTGGCGCCAGGGATaGCCGCCGCGATGGCAGTTACCGCTCTTCCTGCCG +
Preference number: 6 (lower is better)
Translates to: KPVPRPTPWRQG*PPRWQLPLFLP
Trigger: CGGCAGGAAGAGCGGTAACTGCCATCGCGGCGGGCATCCCTGGCGCCAGGGTGTTGGTCTGGGTACCGGCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558752.1
CDS TCA 72 bp CACCTCGCAGGTGTGGACAGTCTCACATTGAGAAGCTaGGCAGCGTGGGCCCGTGGCGGGTGCCTGGGCAGG +
Preference number: 6 (lower is better)
Translates to: HLAGVDSLTLRS*AAWARGGCLGR
Trigger: CCTGCCCAGGCACCCGCCACGGGCCCACGCTGCTCAGCTTCTCAATGTGAGACTGTCCACACCTGCGAGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426763.3
ENST00000560881.5
CDS GCA 72 bp GGTCTAGGCTGGTGCTCCAGGCTGCTTACAGCCTGCTaGCTCCCAACCCTTCCCGCAAGCATGCGCAGGTCG +
Preference number: 6 (lower is better)
Translates to: GLGWCSRLLTAC*LPTLPASMRRS
Trigger: CGACCTGCGCATGCTTGCGGGAAGGGTTGGGAGGCAGCAGGCTGTAAGCAGCCTGGAGCACCAGCCTAGACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560055.5
CDS CCA 72 bp GCGGTGTTGCTGAGGTGGAGGCGTCCTGGTCTAGGCTaGTGCTCCAGGCTGCTTACAGCCTGCTGCCTCCCA +
Preference number: 6 (lower is better)
Translates to: AVLLRWRRPGLG*CSRLLTACCLP
Trigger: TGGGAGGCAGCAGGCTGTAAGCAGCCTGGAGCACCAGCCTAGACCAGGACGCCTCCACCTCAGCAACACCGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560055.5
CDS CCA 72 bp AGACCAACACCCTGGCGCCAGGGATGCCCGCCGCGATaGCAGTTACCGCTCTTCCTGCCGGATCTCCGCTTA +
Preference number: 6 (lower is better)
Translates to: RPTPWRQGCPPR*QLPLFLPDLRL
Trigger: TAAGCGGAGATCCGGCAGGAAGAGCGGTAACTGCCATCGCGGCGGGCATCCCTGGCGCCAGGGTGTTGGTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558752.1
CDS TCA 72 bp TGCCCAAGGTTGCACAGCCACCGAGCAGCAGAGCCCTaGCCCAGTAGATGCCAGCATGTCCATGCGCAGGTC +
Preference number: 6 (lower is better)
Translates to: CPRLHSHRAAEP*PSRCQHVHAQV
Trigger: GACCTGCGCATGGACATGCTGGCATCTACTGGGTCAGGGCTCTGCTGCTCGGTGGCTGTGCAACCTTGGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000558815.5
CDS CAA 90 bp AGCGTACGAGATGGCTCCATGACACAGAATGACCTGGCTGCGGTGTaGCTGAGGTGGAGGCGTCCTGGTCTAGGCTGGTGCTCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: SVRDGSMTQNDLAAV*LRWRRPGLGWCSRL
Trigger: CAGCCTGGAGCACCAGCCTAGACCAGGACGCCTCCACCTCAGCAACACCGCAGCCAGGTCATTCTGTGTCATGGAGCCATCTCGTACGCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560055.5
CDS TCA 72 bp GACAGCGACCTAGAACTCTTGTCAGGCGGGACTGAGTaGCCTAAGGCGGCGGGACCGAATTCAGGCAGCCGA +
Preference number: 6 (lower is better)
Translates to: DSDLELLSGGTE*PKAAGPNSGSR
Trigger: TCGGCTGCCTGAATTCGGTCCCGCCGCCTTAGGTCACTCAGTCCCGCCTGACAAGAGTTCTAGGTCGCTGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000559463.5
CDS CCA 72 bp ATGACACAGAATGACCTGGCTGCGGTGTTGCTGAGGTaGAGGCGTCCTGGTCTAGGCTGGTGCTCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: MTQNDLAAVLLR*RRPGLGWCSRL
Trigger: CAGCCTGGAGCACCAGCCTAGACCAGGACGCCTCCACCTCAGCAACACCGCAGCCAGGTCATTCTGTGTCAT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560055.5
CDS CAA 72 bp GATGGCTCCATGACACAGAATGACCTGGCTGCGGTGTaGCTGAGGTGGAGGCGTCCTGGTCTAGGCTGGTGC +
Preference number: 6 (lower is better)
Translates to: DGSMTQNDLAAV*LRWRRPGLGWC
Trigger: GCACCAGCCTAGACCAGGACGCCTCCACCTCAGCAACACCGCAGCCAGGTCATTCTGTGTCATGGAGCCATC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560055.5
CDS CCA 72 bp TGTCACAACTCGGGGGTGCCACTAGCATCTAGTGGGTaGAGGCCAAGGGTGCTGCCCAAATCCTGCAGCGTA +
Preference number: 6 (lower is better)
Translates to: CHNSGVPLASSG*RPRVLPKSCSV
Trigger: TACGCTGCAGGATTTGGGCAGCACCCTTGGCCTCCACCCACTAGATGCTAGTGGCACCCCCGAGTTGTGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000560055.5
CDS CCA 72 bp CAGCAGAGGAAGAGAGCGACTGGGAACTTGGGTGAATaGGAGACCCCTGAGGGCAGACAGCGACCTAGAACT +
Preference number: 6 (lower is better)
Translates to: QQRKRATGNLGE*ETPEGRQRPRT
Trigger: AGTTCTAGGTCGCTGTCTGCCCTCAGGGGTCTCCCATTCACCCAAGTTCCCAGTCGCTCTCTTCCTCTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000559463.5
CDS TCA 72 bp TTCTCATGCCAGAAAGCTGCCGCTTCAGTTAGGATCTaGTCCAGGTCCAGCCAGAGCCCACGCTCCTGGCAA +
Preference number: 6 (lower is better)
Translates to: FSCQKAAASVRI*SRSSQSPRSWQ
Trigger: TTGCCAGGAGCGTGGGCTCTGGCTGGACCTGGATCAGATCCTAACTGAAGCGGCAGCTTTCTGGCATGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426763.3
ENST00000560881.5
CDS GCA 72 bp TCTAGTGGGTGGAGGCCAAGGGTGCTGCCCAAATCCTaGAGCGTACGAGATGGCTCCATGACACAGAATGAC +
Preference number: 6 (lower is better)
Translates to: SSGWRPRVLPKS*SVRDGSMTQND
Trigger: GTCATTCTGTGTCATGGAGCCATCTCGTACGCTGCAGGATTTGGGCAGCACCCTTGGCCTCCACCCACTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000560055.5
CDS TCA 72 bp GCTTCTGCCACACTCATAGCCCAATTCTGTCCACCATaGAAACACTCCTTTCTCATGCCAGAAAGCTGCCGC +
Preference number: 6 (lower is better)
Translates to: ASATLIAQFCPP*KHSFLMPESCR
Trigger: GCGGCAGCTTTCTGGCATGAGAAAGGAGTGTTTTCATGGTGGACAGAATTGGGCTATGAGTGTGGCAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426763.3
ENST00000560881.5