Pregenerated sensors for RPL23 (Homo sapiens)
Ensembl gene IDs: ENSG00000125691Ensembl transcript IDs: ENST00000245857.9, ENST00000378096.3, ENST00000394332.5, ENST00000479035.7, ENST00000577407.5, ENST00000577760.1, ENST00000584056.1, ENST00000584912.5
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGGTATGTCAAAAACACTGTAGAGGCCTGGGTGGGCAGATCACTTaGGATCAGGAGTTTGAGTCGTTTGGCAAACATGGTGAAACCCTG | + |
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Preference number: 1 (lower is better) Translates to: RVCQKHCRGLGGQIT*DQEFESFGKHGETL Trigger: CAGGGTTTCACCATGTTTGCCAAACGACTCAAACTCCTGATCTCAAGTGATCTGCCCACCCAGGCCTCTACAGTGTTTTTGACATACCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| 3UTR CCA 90 bp | AAACCAAGCCTGGTTCAGTCTAGACAGGGTACTGGTTCTCAGTCTTaGGTATACCTTGACATCTCCTGGGAGCTTCACAATTCTGATGTC | + |
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Preference number: 1 (lower is better) Translates to: KPSLVQSRQGTGSQS*VYLDISWELHNSDV Trigger: GACATCAGAATTGTGAAGCTCCCAGGAGATGTCAAGGTATACCCAAGACTGAGAACCAGTACCCTGTCTAGACTGAACCAGGCTTGGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| 3UTR GCA 90 bp | ACAACCTCCTACCTTAAGGCCAAGTCCCTTATTATCAGCGCTTTATaGCTGTTCAGTTGGCAAAAATTTACCACATTCTTCCATTCTCAA | + |
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Preference number: 1 (lower is better) Translates to: TTSYLKAKSLIISAL*LFSWQKFTTFFHSQ Trigger: TTGAGAATGGAAGAATGTGGTAAATTTTTGCCAACTGAACAGGCATAAAGCGCTGATAATAAGGGACTTGGCCTTAAGGTAGGAGGTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| 3UTR CCA 90 bp | CTTAAGGCCAAGTCCCTTATTATCAGCGCTTTATGCCTGTTCAGTTaGCAAAAATTTACCACATTCTTCCATTCTCAAACTAGAGCTTGG | + |
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Preference number: 1 (lower is better) Translates to: LKAKSLIISALCLFS*QKFTTFFHSQTRAW Trigger: CCAAGCTCTAGTTTGAGAATGGAAGAATGTGGTAAATTTTTGCCAACTGAACAGGCATAAAGCGCTGATAATAAGGGACTTGGCCTTAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| 3UTR-3UTR TCA 90 bp | ACCGCGCCCAGCCATTTGAATGCCTTCCTCACTCCAGGAGAAGCTACCATGTATCCAAAGAATAAAATGTaGGGTGGGATGCAGTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: TAPSHLNAFLTPGEATMYPKNKM*GGMQWL Trigger: GAGCCACTGCATCCCACCTCACATTTTATTCTTTGG...ATACATGGTAGCTTCTCCTGGAGTGAGGAAGGCATTCAAATGGCTGGGCGCGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| 3UTR-3UTR TCA 90 bp | ACCTCCTACCTTAAGGCCAAGTCCCTTATTATCAGCGCTTTATGCCTGTTCAGTGGCAGGAGAATCGCTTaGACCCTGGAAGTGAACAGG | + |
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Preference number: 2 (lower is better) Translates to: TSYLKAKSLIISALCLFSGRRIA*TLEVNR Trigger: CCTGTTCACTTCCAGGGTTCAAGCGATTCTCCTGCC...ACTGAACAGGCATAAAGCGCTGATAATAAGGGACTTGGCCTTAAGGTAGGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| 3UTR-3UTR GCA 90 bp | ACCTCCTACCTTAAGGCCAAGTCCCTTATTATCAGCGCTTTATGCCTGTTCAGTCCTGACCTCATGATCTaGCTGCCTTGGCCTCCGAAA | + |
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Preference number: 2 (lower is better) Translates to: TSYLKAKSLIISALCLFSPDLMI*LPWPPK Trigger: TTTCGGAGGCCAAGGCAGGCAGATCATGAGGTCAGG...ACTGAACAGGCATAAAGCGCTGATAATAAGGGACTTGGCCTTAAGGTAGGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| 3UTR-3UTR CCA 90 bp | GCTCACACTTGTAATTGCAGCCCTTTGAAGGCCACAGCAGGAGGATTCCAAGTCTACAGTGAGCTTCAGTaGTGTTACTGCACTCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: AHTCNCSPLKATAGGFQVYSELQ*CYCTPA Trigger: TGCTGGAGTGCAGTAACACCACTGAAGCTCACTGTA...GACTTGGAATCCTCCTGCTGTGGCCTTCAAAGGGCTGCAATTACAAGTGTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394332.5 |
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| 3UTR CAA 90 bp | TGGTTCAGTCTAGACAGGGTACTGGTTCTCAGTCTTGGGTATACCTaGACATCTCCTGGGAGCTTCACAATTCTGATGTCTGAGTCCTAT | + |
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Preference number: 2 (lower is better) Translates to: WFSLDRVLVLSLGYT*TSPGSFTILMSESY Trigger: ATAGGACTCAGACATCAGAATTGTGAAGCTCCCAGGAGATGTCAAGGTATACCCAAGACTGAGAACCAGTACCCTGTCTAGACTGAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| 3UTR-3UTR GCA 90 bp | CCCTTTGAAGGCCACAGCAGGAGGATTCCAAGTCCAGCAGTTCAAAGTTACAGTCTTCAGTGGTGTTACTaGACTCCAGCAAATATACTG | + |
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Preference number: 2 (lower is better) Translates to: PFEGHSRRIPSPAVQSYSLQWCY*TPANIL Trigger: CAGTATATTTGCTGGAGTGCAGTAACACCACTGAAG...ACTGTAACTTTGAACTGCTGGACTTGGAATCCTCCTGCTGTGGCCTTCAAAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394332.5 |
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| 3UTR-3UTR GCA 90 bp | ACTCACATCATTCCTCAAAATCCATGTGTGTGTCCAGGATCTAACTATATAGTCGCAATCTCGACTCGCTaGAAACTCCACCTCCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: THIIPQNPCVCPGSNYIVAISTR*KLHLPG Trigger: ACCTGGGAGGTGGAGTTTGCAGCGAGTCGAGATTGC...GACTATATAGTTAGATCCTGGACACACACATGGATTTTGAGGAATGATGTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| 3UTR-3UTR TCA 90 bp | ACCACATTCTTCCATTCTCAAACTAGAGCTTGGAACATAAATTACACGATCATCGTAATTGCAGCCCTTTaGAGGCCACAGCAGGAGGAT | + |
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Preference number: 2 (lower is better) Translates to: TTFFHSQTRAWNINYTIIVIAAL*RPQQED Trigger: ATCCTCCTGCTGTGGCCTTCAAAGGGCTGCAATTAC...GATGATCGTGTAATTTATGTTCCAAGCTCTAGTTTGAGAATGGAAGAATGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| 3UTR-3UTR TCA 90 bp | ACCACATTCTTCCATTCTCAAACTAGAGCTTGGAACATAAATTACACGATCATCCTTGAACCCTGGAAGTaGACAGGGAGACAAGCACTG | + |
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Preference number: 2 (lower is better) Translates to: TTFFHSQTRAWNINYTIILEPWK*TGRQAL Trigger: CAGTGCTTGTCTCCCTGTTCACTTCCAGGGTTCAAG...GATGATCGTGTAATTTATGTTCCAAGCTCTAGTTTGAGAATGGAAGAATGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| 3UTR-3UTR CAA 90 bp | CCAGCAGTTCAAAGTTACAGTGAGCTTCAGTGGTGTTACTGCACTCCAGCCTGTACCGCGCCCAGCCATTaGAATGCCTTCCTCACTCCA | + |
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Preference number: 3 (lower is better) Translates to: PAVQSYSELQWCYCTPACTAPSH*NAFLTP Trigger: TGGAGTGAGGAAGGCATTCAAATGGCTGGGCGCGGT...ACAGGCTGGAGTGCAGTAACACCACTGAAGCTCACTGTAACTTTGAACTGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| 3UTR TCA 72 bp | CAGGAGGATTCCAAGTCCAGCAGTTCAAAGTTACAGTaGGCTTCAGTGGTGTTACTGCACTCCAGCCTGTGT | + |
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Preference number: 3 (lower is better) Translates to: QEDSKSSSSKLQ*ASVVLLHSSLC Trigger: ACACAGGCTGGAGTGCAGTAACACCACTGAAGCTCACTGTAACTTTGAACTGCTGGACTTGGAATCCTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| 3UTR TCA 72 bp | CAAAAACACTGTAGAGGCCTGGGTGGGCAGATCACTTaGGATCAGGAGTTTGAGTCGTTTGGCAAACATGGT | + |
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Preference number: 3 (lower is better) Translates to: QKHCRGLGGQIT*DQEFESFGKHG Trigger: ACCATGTTTGCCAAACGACTCAAACTCCTGATCTCAAGTGATCTGCCCACCCAGGCCTCTACAGTGTTTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| 3UTR CCA 72 bp | CTGGTTCAGTCTAGACAGGGTACTGGTTCTCAGTCTTaGGTATACCTTGACATCTCCTGGGAGCTTCACAAT | + |
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Preference number: 3 (lower is better) Translates to: LVQSRQGTGSQS*VYLDISWELHN Trigger: ATTGTGAAGCTCCCAGGAGATGTCAAGGTATACCCAAGACTGAGAACCAGTACCCTGTCTAGACTGAACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| 3UTR TCA 72 bp | CAGGAGGATTCCAAGTCCAGCAGTTCAAAGTTACAGTaGGCTTCAGTGGTGTTACTGCACTCCAGCAAATAT | + |
|
Preference number: 3 (lower is better) Translates to: QEDSKSSSSKLQ*ASVVLLHSSKY Trigger: ATATTTGCTGGAGTGCAGTAACACCACTGAAGCTCACTGTAACTTTGAACTGCTGGACTTGGAATCCTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394332.5 |
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| 3UTR CCA 72 bp | GGACAGATTAAGACATCGTCAAACACAGAAGATCCTTaGCCTGTACTTCTAGACAATCCACCCAACCTCAGA | + |
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Preference number: 3 (lower is better) Translates to: GQIKTSSNTEDP*PVLLDNPPNLR Trigger: TCTGAGGTTGGGTGGATTGTCTAGAAGTACAGGCCAAGGATCTTCTGTGTTTGACGATGTCTTAATCTGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000577407.5 |
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| 3UTR-3UTR CAA 90 bp | ACCACATTCTTCCATTCTCAAACTAGAGCTTGGAACATAAATTACACGATCATCGGAGGTTTCACCACGTaGGTCAGCCTGGTCTTGAAC | + |
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Preference number: 3 (lower is better) Translates to: TTFFHSQTRAWNINYTIIGGFTT*VSLVLN Trigger: GTTCAAGACCAGGCTGACCAACGTGGTGAAACCTCC...GATGATCGTGTAATTTATGTTCCAAGCTCTAGTTTGAGAATGGAAGAATGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| 3UTR TCA 72 bp | TCACTCCAGGAGAAGCTACCATGTATAGCCAGTCATTaGGCAGTATCTACTATTATTTTTGGGACTCAAAAC | + |
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Preference number: 3 (lower is better) Translates to: SLQEKLPCIASH*AVSTIIFGTQN Trigger: GTTTTGAGTCCCAAAAATAATAGTAGATACTGCTCAATGACTGGCTATACATGGTAGCTTCTCCTGGAGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| 3UTR GCA 72 bp | TACCTTAAGGCCAAGTCCCTTATTATCAGCGCTTTATaGCTGTTCAGTTGGCAAAAATTTACCACATTCTTC | + |
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Preference number: 3 (lower is better) Translates to: YLKAKSLIISAL*LFSWQKFTTFF Trigger: GAAGAATGTGGTAAATTTTTGCCAACTGAACAGGCATAAAGCGCTGATAATAAGGGACTTGGCCTTAAGGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| CDS-3UTR GCA 90 bp | GTAGAGGCCTGGGTGGGCAGATCACTTGAGATCAGGAGTTTGAGTCGTTTGGCACCTGACCTCATGATCTaGCTGCCTTGGCCTCCGAAA | + |
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Preference number: 4 (lower is better) Translates to: VEAWVGRSLEIRSLSRLAPDLMI*LPWPPK Trigger: TTTCGGAGGCCAAGGCAGGCAGATCATGAGGTCAGG...TGCCAAACGACTCAAACTCCTGATCTCAAGTGATCTGCCCACCCAGGCCTCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| CDS-3UTR GCA 90 bp | AGCTACCGCGCCCAGCCATTTGAATGCCTTCCTCACTCCAGGAGAAGCTACCATCAGAGTTTCACTGGTTaGCCAGGCTGGAGCACAATC | + |
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Preference number: 4 (lower is better) Translates to: SYRAQPFECLPHSRRSYHQSFTG*PGWSTI Trigger: GATTGTGCTCCAGCCTGGGCAACCAGTGAAACTCTG...ATGGTAGCTTCTCCTGGAGTGAGGAAGGCATTCAAATGGCTGGGCGCGGTAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| CDS-3UTR TCA 90 bp | GTAGAGGCCTGGGTGGGCAGATCACTTGAGATCAGGAGTTTGAGTCGTTTGGCAGTAATTGCAGCCCTTTaGAGGCCACAGCAGGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: VEAWVGRSLEIRSLSRLAVIAAL*RPQQED Trigger: ATCCTCCTGCTGTGGCCTTCAAAGGGCTGCAATTAC...TGCCAAACGACTCAAACTCCTGATCTCAAGTGATCTGCCCACCCAGGCCTCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| CDS-3UTR TCA 90 bp | TTGCAGCCCTTTGAAGGCCACAGCAGGAGGATTCCAAGTCCAGCAGTTCAAAGTGATTCTCTCAGTAGCTaGGATTACAGGCGGTGCGCC | + |
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Preference number: 4 (lower is better) Translates to: LQPFEGHSRRIPSPAVQSDSLSS*DYRRCA Trigger: GGCGCACCGCCTGTAATCTCAGCTACTGAGAGAATC...ACTTTGAACTGCTGGACTTGGAATCCTCCTGCTGTGGCCTTCAAAGGGCTGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| CDS-3UTR TCA 90 bp | CAGCCCTTTGAAGGCCACAGCAGGAGGATTCCAAGTCCAGCAGTTCAAAGTTACCTTGAACCCTGGAAGTaGACAGGGAGACAAGCACTG | + |
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Preference number: 4 (lower is better) Translates to: QPFEGHSRRIPSPAVQSYLEPWK*TGRQAL Trigger: CAGTGCTTGTCTCCCTGTTCACTTCCAGGGTTCAAG...GTAACTTTGAACTGCTGGACTTGGAATCCTCCTGCTGTGGCCTTCAAAGGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| CDS-3UTR TCA 90 bp | TTGCAGCCCTTTGAAGGCCACAGCAGGAGGATTCCAAGTCCAGCAGTTCAAAGTAAAACTAGCCAGGCATaGCGGCAGGTGCCTGTAATC | + |
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Preference number: 4 (lower is better) Translates to: LQPFEGHSRRIPSPAVQSKTSQA*RQVPVI Trigger: GATTACAGGCACCTGCCGTCATGCCTGGCTAGTTTT...ACTTTGAACTGCTGGACTTGGAATCCTCCTGCTGTGGCCTTCAAAGGGCTGCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| CDS-3UTR TCA 90 bp | GGGTATACCTTGACATCTCCTGGGAGCTTCACAATTCTGATGTCTGAGTCCTATCCGCGCCCAGCCATTTaGATGCCTTCCTCACTCCAG | + |
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Preference number: 4 (lower is better) Translates to: GYTLTSPGSFTILMSESYPRPAI*MPSSLQ Trigger: CTGGAGTGAGGAAGGCATTCAAATGGCTGGGCGCGG...ATAGGACTCAGACATCAGAATTGTGAAGCTCCCAGGAGATGTCAAGGTATACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| CDS-3UTR GCA 90 bp | GCCACAGCAGGAGGATTCCAAGTCCAGCAGTTCAAAGTTACAGTGAGCTTCAGTGCAATCTCGACTCGCTaGAAACTCCACCTCCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: ATAGGFQVQQFKVTVSFSAISTR*KLHLPG Trigger: ACCTGGGAGGTGGAGTTTGCAGCGAGTCGAGATTGC...ACTGAAGCTCACTGTAACTTTGAACTGCTGGACTTGGAATCCTCCTGCTGTGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| CDS-3UTR TCA 90 bp | AATTGCAGCCCTTTGAAGGCCACAGCAGGAGGATTCCAAGTCCAGCAGTTCAAAGTAATTGCAGCCCTTTaGAGGCCACAGCAGGAGGAT | + |
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Preference number: 4 (lower is better) Translates to: NCSPLKATAGGFQVQQFKVIAAL*RPQQED Trigger: ATCCTCCTGCTGTGGCCTTCAAAGGGCTGCAATTAC...TTTGAACTGCTGGACTTGGAATCCTCCTGCTGTGGCCTTCAAAGGGCTGCAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394332.5 ENST00000479035.7 |
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| CDS-3UTR TCA 90 bp | CTTGGGTATACCTTGACATCTCCTGGGAGCTTCACAATTCTGATGTCTGAGTCCGGCAGGAGAATCGCTTaGACCCTGGAAGTGAACAGG | + |
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Preference number: 4 (lower is better) Translates to: LGYTLTSPGSFTILMSESGRRIA*TLEVNR Trigger: CCTGTTCACTTCCAGGGTTCAAGCGATTCTCCTGCC...GGACTCAGACATCAGAATTGTGAAGCTCCCAGGAGATGTCAAGGTATACCCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| CDS-3UTR CCA 90 bp | TTGAAGGCCACAGCAGGAGGATTCCAAGTCCAGCAGTTCAAAGTTACAGTGAGCAACACTGTAGAGGCCTaGGTGGGCAGATCACTTGAG | + |
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Preference number: 4 (lower is better) Translates to: LKATAGGFQVQQFKVTVSNTVEA*VGRSLE Trigger: CTCAAGTGATCTGCCCACCCAGGCCTCTACAGTGTT...GCTCACTGTAACTTTGAACTGCTGGACTTGGAATCCTCCTGCTGTGGCCTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| CDS-3UTR CCA 90 bp | CCAGCAGTTCAAAGTTACAGTGAGCTTCAGTGGTGTTACTGCACTCCAGCCTGTATGATCTGCCTGCCTTaGCCTCCGAAAGTGTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: PAVQSYSELQWCYCTPACMICLP*PPKVLG Trigger: TCCCAACACTTTCGGAGGCCAAGGCAGGCAGATCAT...ACAGGCTGGAGTGCAGTAACACCACTGAAGCTCACTGTAACTTTGAACTGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| CDS-3UTR TCA 90 bp | ACCTCCTACCTTAAGGCCAAGTCCCTTATTATCAGCGCTTTATGCCTGTTCAGTCTGGTCTCACTCTCCTaGCCTCAGATGATCCACCCA | + |
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Preference number: 4 (lower is better) Translates to: TSYLKAKSLIISALCLFSLVSLS*PQMIHP Trigger: TGGGTGGATCATCTGAGGTCAGGAGAGTGAGACCAG...ACTGAACAGGCATAAAGCGCTGATAATAAGGGACTTGGCCTTAAGGTAGGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| CDS-3UTR GCA 90 bp | GCTCACACTTGTAATTGCAGCCCTTTGAAGGCCACAGCAGGAGGATTCCAAGTCGCTCACACTTGTAATTaGAGCCCTTTGAAGGCCACA | + |
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Preference number: 4 (lower is better) Translates to: AHTCNCSPLKATAGGFQVAHTCN*SPLKAT Trigger: TGTGGCCTTCAAAGGGCTGCAATTACAAGTGTGAGC...GACTTGGAATCCTCCTGCTGTGGCCTTCAAAGGGCTGCAATTACAAGTGTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394332.5 ENST00000479035.7 |
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| CDS-3UTR CCA 90 bp | ACCTCCTACCTTAAGGCCAAGTCCCTTATTATCAGCGCTTTATGCCTGTTCAGTCTCCGTTGCCCAGGCTaGATGGAGTACAATGGTGCA | + |
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Preference number: 4 (lower is better) Translates to: TSYLKAKSLIISALCLFSLRCPG*MEYNGA Trigger: TGCACCATTGTACTCCATCCAGCCTGGGCAACGGAG...ACTGAACAGGCATAAAGCGCTGATAATAAGGGACTTGGCCTTAAGGTAGGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| CDS-3UTR TCA 90 bp | ATTCCAAGTCCAGCAGTTCAAAGTTACAGTGAGCTTCAGTGGTGTTACTGCACTCTGGTCTTGAACTCCTaGCCTCATGATCTGCCTGCC | + |
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Preference number: 4 (lower is better) Translates to: IPSPAVQSYSELQWCYCTLVLNS*PHDLPA Trigger: GGCAGGCAGATCATGAGGTCAGGAGTTCAAGACCAG...AGTGCAGTAACACCACTGAAGCTCACTGTAACTTTGAACTGCTGGACTTGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| CDS-3UTR TCA 90 bp | GCTCACACTTGTAATTGCAGCCCTTTGAAGGCCACAGCAGGAGGATTCCAAGTCCACAATTCTGATGTCTaGGTCCTATTCTGCAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: AHTCNCSPLKATAGGFQVHNSDV*VLFCSL Trigger: CAGACTGCAGAATAGGACTCAGACATCAGAATTGTG...GACTTGGAATCCTCCTGCTGTGGCCTTCAAAGGGCTGCAATTACAAGTGTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| CDS-3UTR GCA 90 bp | CCTTTGAAGGCCACAGCAGGAGGATTCCAAGTCCAGCAGTTCAAAGTTACAGTGGCTCACACTTGTAATTaGAGCCCTTTGAAGGCCACA | + |
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Preference number: 4 (lower is better) Translates to: PLKATAGGFQVQQFKVTVAHTCN*SPLKAT Trigger: TGTGGCCTTCAAAGGGCTGCAATTACAAGTGTGAGC...CACTGTAACTTTGAACTGCTGGACTTGGAATCCTCCTGCTGTGGCCTTCAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000394332.5 ENST00000479035.7 |
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| CDS-3UTR CCA 90 bp | CCAAGTCCAGCAGTTCAAAGTTACAGTGAGCTTCAGTGGTGTTACTGCACTCCATACAGTGAGCTTCAGTaGTGTTACTGCACTCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: PSPAVQSYSELQWCYCTPYSELQ*CYCTPA Trigger: GGCTGGAGTGCAGTAACACCACTGAAGCTCACTGTA...TGGAGTGCAGTAACACCACTGAAGCTCACTGTAACTTTGAACTGCTGGACTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| CDS-3UTR CCA 90 bp | ACCGCGCCCAGCCATTTGAATGCCTTCCTCACTCCAGGAGAAGCTACCATGTATTACCTTGACATCTCCTaGGAGCTTCACAATTCTGAT | + |
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Preference number: 4 (lower is better) Translates to: TAPSHLNAFLTPGEATMYYLDIS*ELHNSD Trigger: ATCAGAATTGTGAAGCTCCCAGGAGATGTCAAGGTA...ATACATGGTAGCTTCTCCTGGAGTGAGGAAGGCATTCAAATGGCTGGGCGCGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| CDS-3UTR CCA 90 bp | TGCAGCCCTTTGAAGGCCACAGCAGGAGGATTCCAAGTCCAGCAGTTCAAAGTTACTGGTTCTCAGTCTTaGGTATACCTTGACATCTCC | + |
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Preference number: 4 (lower is better) Translates to: CSPLKATAGGFQVQQFKVTGSQS*VYLDIS Trigger: GGAGATGTCAAGGTATACCCAAGACTGAGAACCAGT...AACTTTGAACTGCTGGACTTGGAATCCTCCTGCTGTGGCCTTCAAAGGGCTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| CDS-3UTR TCA 90 bp | CCAAGTCCAGCAGTTCAAAGTTACAGTGAGCTTCAGTGGTGTTACTGCACTCCACCAAAGAATAAAATGTaGGGTGGGATGCAGTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: PSPAVQSYSELQWCYCTPPKNKM*GGMQWL Trigger: GAGCCACTGCATCCCACCTCACATTTTATTCTTTGG...TGGAGTGCAGTAACACCACTGAAGCTCACTGTAACTTTGAACTGCTGGACTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000394332.5 ENST00000479035.7 |
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| CDS-3UTR TCA 90 bp | GCTCACACTTGTAATTGCAGCCCTTTGAAGGCCACAGCAGGAGGATTCCAAGTCGCAATTGGAAGATGCTaGAAGTCTGCAAACTCACAA | + |
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Preference number: 4 (lower is better) Translates to: AHTCNCSPLKATAGGFQVAIGRC*KSANSQ Trigger: TTGTGAGTTTGCAGACTTTCAGCATCTTCCAATTGC...GACTTGGAATCCTCCTGCTGTGGCCTTCAAAGGGCTGCAATTACAAGTGTGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| CDS-3UTR GCA 90 bp | TACCTTAAGGCCAAGTCCCTTATTATCAGCGCTTTATGCCTGTTCAGTTGGCAAGCCCAGCCATTTGAATaGCTTCCTCACTCCAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: YLKAKSLIISALCLFSWQAQPFE*LPHSRR Trigger: TCTCCTGGAGTGAGGAAGGCATTCAAATGGCTGGGC...TTGCCAACTGAACAGGCATAAAGCGCTGATAATAAGGGACTTGGCCTTAAGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
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| CDS-3UTR CCA 90 bp | CATTTCAGAAAAGTGATGGTCAGGGTATGTCAAAAACACTGTAGAGGCCTGGGTAGCCTCCCAAGTAGCTaGGATTACAGCATGCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: HFRKVMVRVCQKHCRGLGSLPSS*DYSMHH Trigger: GTGGTGCATGCTGTAATCCCAGCTACTTGGGAGGCT...ACCCAGGCCTCTACAGTGTTTTTGACATACCCTGACCATCACTTTTCTGAAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000479035.7 |
||
| CDS-3UTR TCA 90 bp | CAGCCCTTTGAAGGCCACAGCAGGAGGATTCCAAGTCCAGCAGTTCAAAGTTACTCCATTTCAGAAAAGTaGTGGTCAGGGTATGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QPFEGHSRRIPSPAVQSYSISEK*WSGYVK Trigger: TTTGACATACCCTGACCATCACTTTTCTGAAATGGA...GTAACTTTGAACTGCTGGACTTGGAATCCTCCTGCTGTGGCCTTCAAAGGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479035.7 |
||
| CDS-3UTR TCA 90 bp | AATTGCAGCCCTTTGAAGGCCACAGCAGGAGGATTCCAAGTCCAGCAGTTCAAAAAGGGTAGTCCTTTTTaGTACCAAGTGGAGCTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: NCSPLKATAGGFQVQQFKKGSPF*YQVELV Trigger: TACAAGCTCCACTTGGTATCAAAAAGGACTACCCTT...TTTGAACTGCTGGACTTGGAATCCTCCTGCTGTGGCCTTCAAAGGGCTGCAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000479035.7 |
||
| 3UTR CAA 72 bp | CTAGACAGGGTACTGGTTCTCAGTCTTGGGTATACCTaGACATCTCCTGGGAGCTTCACAATTCTGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LDRVLVLSLGYT*TSPGSFTILMS Trigger: AGACATCAGAATTGTGAAGCTCCCAGGAGATGTCAAGGTATACCCAAGACTGAGAACCAGTACCCTGTCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
||
| CDS-3UTR TCA 90 bp | GTCCAGCAGTTCAAAGTTACAGTGAGCTTCAGTGGTGTTACTGCACTCCAGCAAAGTTCAAAGTTACAGTaGGCTTCAGTGGTGTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: VQQFKVTVSFSGVTALQQSSKLQ*ASVVLL Trigger: CAGTAACACCACTGAAGCTCACTGTAACTTTGAACT...TTGCTGGAGTGCAGTAACACCACTGAAGCTCACTGTAACTTTGAACTGCTGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394332.5 |
||
| CDS-3UTR GCA 90 bp | AGTCCAGCAGTTCAAAGTTACAGTGAGCTTCAGTGGTGTTACTGCACTCCAGCACTTCAGTGGTGTTACTaGACTCCAGCAAATATACTG | + |
|
Preference number: 4 (lower is better) Translates to: SPAVQSYSELQWCYCTPALQWCY*TPANIL Trigger: CAGTATATTTGCTGGAGTGCAGTAACACCACTGAAG...TGCTGGAGTGCAGTAACACCACTGAAGCTCACTGTAACTTTGAACTGCTGGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394332.5 |
||
| CDS-3UTR CCA 90 bp | AGCCTGGTTCAGTCTAGACAGGGTACTGGTTCTCAGTCTTGGGTATACCTTGACATGCACCACCATGCCTaGCTAATTTTGTATAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLVQSRQGTGSQSWVYLDMHHHA*LILYSR Trigger: TCTACTATACAAAATTAGCCAGGCATGGTGGTGCAT...GTCAAGGTATACCCAAGACTGAGAACCAGTACCCTGTCTAGACTGAACCAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479035.7 |
||
| CDS-3UTR TCA 90 bp | ACCTCCTACCTTAAGGCCAAGTCCCTTATTATCAGCGCTTTATGCCTGTTCAGTAGTTCAAAGTTACAGTaGGCTTCAGTGGTGTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: TSYLKAKSLIISALCLFSSSKLQ*ASVVLL Trigger: CAGTAACACCACTGAAGCTCACTGTAACTTTGAACT...ACTGAACAGGCATAAAGCGCTGATAATAAGGGACTTGGCCTTAAGGTAGGAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
||
| CDS-3UTR TCA 90 bp | CATTTCAGAAAAGTGATGGTCAGGGTATGTCAAAAACACTGTAGAGGCCTGGGTGGAGCTTCACAATTCTaGTGTCTGAGTCCTATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: HFRKVMVRVCQKHCRGLGGASQF*CLSPIL Trigger: CAGAATAGGACTCAGACATCAGAATTGTGAAGCTCC...ACCCAGGCCTCTACAGTGTTTTTGACATACCCTGACCATCACTTTTCTGAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000479035.7 |
||
| CDS-3UTR TCA 90 bp | ACTCACATCATTCCTCAAAATCCATGTGTGTGTCCAGGATCTAACTATATAGTCGTCTTGGGTATACCTTaGCATCTCCTGGGAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: THIIPQNPCVCPGSNYIVVLGIP*HLLGAS Trigger: TGAAGCTCCCAGGAGATGTCAAGGTATACCCAAGAC...GACTATATAGTTAGATCCTGGACACACACATGGATTTTGAGGAATGATGTGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479035.7 |
||
| CDS-3UTR CCA 90 bp | CCCTTTGAAGGCCACAGCAGGAGGATTCCAAGTCCAGCAGTTCAAAGTTACAGTCTTTTTGATACCAAGTaGAGCTTGTATTATACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PFEGHSRRIPSPAVQSYSLFDTK*SLYYTQ Trigger: TTGGGTATAATACAAGCTCCACTTGGTATCAAAAAG...ACTGTAACTTTGAACTGCTGGACTTGGAATCCTCCTGCTGTGGCCTTCAAAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000479035.7 |
||
| CDS-3UTR CCA 90 bp | AGCCTGGTTCAGTCTAGACAGGGTACTGGTTCTCAGTCTTGGGTATACCTTGACTACTCAGGGATGTTATaGTGTAACTCTCTAAAACTA | + |
|
Preference number: 4 (lower is better) Translates to: SLVQSRQGTGSQSWVYLDYSGML*CNSLKL Trigger: TAGTTTTAGAGAGTTACACCATAACATCCCTGAGTA...GTCAAGGTATACCCAAGACTGAGAACCAGTACCCTGTCTAGACTGAACCAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479035.7 |
||
| CDS-3UTR CCA 90 bp | TCAAACACAGAAGATCCTTGGCCTGTACTTCTAGACAATCCACCCAACCTCAGAAACACAGAAGATCCTTaGCCTGTACTTCTAGACAAT | + |
|
Preference number: 4 (lower is better) Translates to: SNTEDPWPVLLDNPPNLRNTEDP*PVLLDN Trigger: ATTGTCTAGAAGTACAGGCCAAGGATCTTCTGTGTT...TCTGAGGTTGGGTGGATTGTCTAGAAGTACAGGCCAAGGATCTTCTGTGTTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000577407.5 |
||
| CDS-3UTR GCA 90 bp | TACATAAACAAACTCACATCATTCCTCAAAATCCATGTGTGTGTCCAGGATCTACTTCAGTGGTGTTACTaGACTCCAGCCTGTGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: YINKLTSFLKIHVCVQDLLQWCY*TPACVT Trigger: TGTCACACAGGCTGGAGTGCAGTAACACCACTGAAG...TAGATCCTGGACACACACATGGATTTTGAGGAATGATGTGAGTTTGTTTATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479035.7 |
||
| CDS-3UTR CCA 90 bp | AAACCAAGCCTGGTTCAGTCTAGACAGGGTACTGGTTCTCAGTCTTGGGTATACTCTCAAACTAGAGCTTaGAACATAAATTACACGATC | + |
|
Preference number: 4 (lower is better) Translates to: KPSLVQSRQGTGSQSWVYSQTRA*NINYTI Trigger: GATCGTGTAATTTATGTTCCAAGCTCTAGTTTGAGA...GTATACCCAAGACTGAGAACCAGTACCCTGTCTAGACTGAACCAGGCTTGGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
||
| CDS-3UTR CCA 90 bp | CCAAGTCCAGCAGTTCAAAGTTACAGTGAGCTTCAGTGGTGTTACTGCACTCCATTATGCCTGTTCAGTTaGCAAAAATTTACCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: PSPAVQSYSELQWCYCTPLCLFS*QKFTTF Trigger: GAATGTGGTAAATTTTTGCCAACTGAACAGGCATAA...TGGAGTGCAGTAACACCACTGAAGCTCACTGTAACTTTGAACTGCTGGACTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000479035.7 |
||
| CDS TCA 90 bp | GCCCTGGCAGTGCTCTCGCGGTGGCCTGGCTCTCTCTCTCCGGCCTaGAGGAGAGCAAAGCGCCCCAGCTGCCTAGGGCCACCGCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ALAVLSRWPGSLSPA*RRAKRPSCLGPPLL Trigger: CAGGAGCGGTGGCCCTAGGCAGCTGGGGCGCTTTGCTCTCCTTCAGGCCGGAGAGAGAGAGCCAGGCCACCGCGAGAGCACTGCCAGGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577760.1 |
||
| CDS CCA 90 bp | CCCACTGCCACTTTCGAGGGCCCTGGCAGTGCTCTCGCGGTGGCCTaGCTCTCTCTCTCCGGCCTGAAGGAGAGCAAAGCGCCCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PTATFEGPGSALAVA*LSLSGLKESKAPQL Trigger: CAGCTGGGGCGCTTTGCTCTCCTTCAGGCCGGAGAGAGAGAGCCAGGCCACCGCGAGAGCACTGCCAGGGCCCTCGAAAGTGGCAGTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378096.3 ENST00000577760.1 |
||
| CDS GCA 90 bp | CCCCAGCTGCCTAGGGCCACCGCTCCTGACGAATCCGCCAGCCACTaGACGACAGATGGTGGAGGATCCTCCAGAAACAAAACCTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: PQLPRATAPDESASH*TTDGGGSSRNKTSP Trigger: AGGTGAGGTTTTGTTTCTGGAGGATCCTCCACCATCTGTCGTGCAGTGGCTGGCGGATTCGTCAGGAGCGGTGGCCCTAGGCAGCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000577760.1 |
||
| CDS GCA 90 bp | GCGGAGCGATCTCGCGGTATCCAGACTACATTCACGTCGGGATCCTaGCATCTCAACTCTCCAGCACCCCACTGCCACTTTCGAGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: AERSRGIQTTFTSGS*HLNSPAPHCHFRGP Trigger: GGGCCCTCGAAAGTGGCAGTGGGGTGCTGGAGAGTTGAGATGGCAGGATCCCGACGTGAATGTAGTCTGGATACCGCGAGATCGCTCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577760.1 |
||
| CDS-3UTR CAA 90 bp | AAGGCCACAGCAGGAGGATTCCAAGTCCAGCAGTTCAAAGTTACAGTGAGCTTCACCGCGCCCAGCCATTaGAATGCCTTCCTCACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KATAGGFQVQQFKVTVSFTAPSH*NAFLTP Trigger: TGGAGTGAGGAAGGCATTCAAATGGCTGGGCGCGGT...GAAGCTCACTGTAACTTTGAACTGCTGGACTTGGAATCCTCCTGCTGTGGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
||
| CDS-3UTR CAA 90 bp | AAGGCCACAGCAGGAGGATTCCAAGTCCAGCAGTTCAAAGTTACAGTGAGCTTCCATGATCTGCCTGCCTaGGCCTCCGAAAGTGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KATAGGFQVQQFKVTVSFHDLPA*ASESVG Trigger: CCCAACACTTTCGGAGGCCAAGGCAGGCAGATCATG...GAAGCTCACTGTAACTTTGAACTGCTGGACTTGGAATCCTCCTGCTGTGGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
||
| CDS-3UTR CAA 90 bp | ATTCCAAGTCCAGCAGTTCAAAGTTACAGTGAGCTTCAGTGGTGTTACTGCACTGGCGGGAACGGAATCTaGCTCCGTTGCCCAGGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: IPSPAVQSYSELQWCYCTGGNGI*LRCPGW Trigger: CCAGCCTGGGCAACGGAGCAAGATTCCGTTCCCGCC...AGTGCAGTAACACCACTGAAGCTCACTGTAACTTTGAACTGCTGGACTTGGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
||
| CDS GCA 90 bp | CTCTGGTCTGTCCCACCACTGACTGAGACCAACAATCCACCCTCCTaGCATCTCATCTACAAAGTGAAGGCCATTTGCTCTGCTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LWSVPPLTETNNPPS*HLIYKVKAICSALL Trigger: GAGAAGAGCAGAGCAAATGGCCTTCACTTTGTAGATGAGATGGCAGGAGGGTGGATTGTTGGTCTCAGTCAGTGGTGGGACAGACCAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577760.1 ENST00000584912.5 |
||
| CDS-3UTR CAA 90 bp | AGCCTGGTTCAGTCTAGACAGGGTACTGGTTCTCAGTCTTGGGTATACCTTGACCCAGAGTTTCACTGGTaGCCCAGGCTGGAGCACAAT | + |
|
Preference number: 5 (lower is better) Translates to: SLVQSRQGTGSQSWVYLDPEFHW*PRLEHN Trigger: ATTGTGCTCCAGCCTGGGCAACCAGTGAAACTCTGG...GTCAAGGTATACCCAAGACTGAGAACCAGTACCCTGTCTAGACTGAACCAGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
||
| CDS-3UTR CAA 90 bp | AAACCAAGCCTGGTTCAGTCTAGACAGGGTACTGGTTCTCAGTCTTGGGTATACGGAGGTTTCACCACGTaGGTCAGCCTGGTCTTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: KPSLVQSRQGTGSQSWVYGGFTT*VSLVLN Trigger: GTTCAAGACCAGGCTGACCAACGTGGTGAAACCTCC...GTATACCCAAGACTGAGAACCAGTACCCTGTCTAGACTGAACCAGGCTTGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
||
| CDS TCA 90 bp | GTAGAAATGGGACCTGGGACCCCCAACTCCTCCCAGTCCTGGCAATaGGCAGAGACCAAGCTATTCAGATTTACACTGGAAAACAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VEMGPGTPNSSQSWQ*AETKLFRFTLENSL Trigger: CAAACTGTTTTCCAGTGTAAATCTGAATAGCTTGGTCTCTGCTCATTGCCAGGACTGGGAGGAGTTGGGGGTCCCAGGTCCCATTTCTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000577760.1 ENST00000584912.5 |
||
| CDS-3UTR CAA 90 bp | TTGAAGGCCACAGCAGGAGGATTCCAAGTCCAGCAGTTCAAAGTTACAGTGAGCAGTCTTGGGTATACCTaGACATCTCCTGGGAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LKATAGGFQVQQFKVTVSSLGYT*TSPGSF Trigger: GAAGCTCCCAGGAGATGTCAAGGTATACCCAAGACT...GCTCACTGTAACTTTGAACTGCTGGACTTGGAATCCTCCTGCTGTGGCCTTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
||
| CDS-3UTR CAA 90 bp | GCCACAGCAGGAGGATTCCAAGTCCAGCAGTTCAAAGTTACAGTGAGCTTCAGTAGGAGTTTGAGTCGTTaGGCAAACATGGTGAAACCC | + |
|
Preference number: 5 (lower is better) Translates to: ATAGGFQVQQFKVTVSFSRSLSR*ANMVKP Trigger: GGGTTTCACCATGTTTGCCAAACGACTCAAACTCCT...ACTGAAGCTCACTGTAACTTTGAACTGCTGGACTTGGAATCCTCCTGCTGTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000479035.7 |
||
| CDS TCA 90 bp | TTTAAAACTGAAGTGTTCGGAGCTCTGGTCTGTCCCACCACTGACTaGGACCAACAATCCACCCTCCTGCCATCTCATCTACAAAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: FKTEVFGALVCPTTD*DQQSTLLPSHLQSE Trigger: TTCACTTTGTAGATGAGATGGCAGGAGGGTGGATTGTTGGTCTCAGTCAGTGGTGGGACAGACCAGAGCTCCGAACACTTCAGTTTTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577760.1 ENST00000584912.5 |
||
| CDS CCA 90 bp | ACATGTGGGGGACAGATTAAGACATCGTCAAACACAGAAGATCCTTaGCCTGTACTTCTAGACAATCCACCCAACCTCAGAGACCTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: TCGGQIKTSSNTEDP*PVLLDNPPNLRDLR Trigger: CCTTAGGTCTCTGAGGTTGGGTGGATTGTCTAGAAGTACAGGCCAAGGATCTTCTGTGTTTGACGATGTCTTAATCTGTCCCCCACATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000577407.5 ENST00000584912.5 |
||
| CDS CCA 90 bp | ATTGGAAACTCACAACTAGTTTTAAAACTGAAGTGTTCGGAGCTCTaGTCTGTCCCACCACTGACTGAGACCAACAATCCACCCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: IGNSQLVLKLKCSEL*SVPPLTETNNPPSC Trigger: GCAGGAGGGTGGATTGTTGGTCTCAGTCAGTGGTGGGACAGACCAGAGCTCCGAACACTTCAGTTTTAAAACTAGTTGTGAGTTTCCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000577760.1 ENST00000584912.5 |
||
| CDS GCA 90 bp | CGCTATAGATTAGCTCGCTCGGATTTTACTTATGCCGTCCCCATGTaGCACCCGATTCTCACGGAAAGTAGCCTATTTCTTACTATTAAC | + |
|
Preference number: 5 (lower is better) Translates to: RYRLARSDFTYAVPM*HPILTESSLFLTIN Trigger: GTTAATAGTAAGAAATAGGCTACTTTCCGTGAGAATCGGGTGGCACATGGGGACGGCATAAGTAAAATCCGAGCGAGCTAATCTATAGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000577760.1 |
||
| CDS-3UTR CAA 90 bp | TCAAACACAGAAGATCCTTGGCCTGTACTTCTAGACAATCCACCCAACCTCAGAAAACACAGAAGATCCTaGGCCTGTACTTCTAGACAA | + |
|
Preference number: 5 (lower is better) Translates to: SNTEDPWPVLLDNPPNLRKHRRS*ACTSRQ Trigger: TTGTCTAGAAGTACAGGCCAAGGATCTTCTGTGTTT...TCTGAGGTTGGGTGGATTGTCTAGAAGTACAGGCCAAGGATCTTCTGTGTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000577407.5 |
||
| CDS-3UTR CAA 90 bp | CCAAGTCCAGCAGTTCAAAGTTACAGTGAGCTTCAGTGGTGTTACTGCACTCCAACACGATCATCCTGTTaGTCAAAACATTTTCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: PSPAVQSYSELQWCYCTPTRSSC*SKHFHS Trigger: GCTATGAAAATGTTTTGACAAACAGGATGATCGTGT...TGGAGTGCAGTAACACCACTGAAGCTCACTGTAACTTTGAACTGCTGGACTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000479035.7 |
||
| CDS-3UTR CAA 90 bp | GGAAGTGAACAGGGAGACAAGCACTGCAAACAAATACTTTTTAATGGGTTTAGTCACACTAAAGCTGACTaGAAATTGACCATACTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSEQGDKHCKQILFNGFSHTKAD*KLTILR Trigger: CCTGAGTATGGTCAATTTCAAGTCAGCTTTAGTGTG...ACTAAACCCATTAAAAAGTATTTGTTTGCAGTGCTTGTCTCCCTGTTCACTTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000479035.7 |
||
| CDS-3UTR CAA 90 bp | ACTCACATCATTCCTCAAAATCCATGTGTGTGTCCAGGATCTAACTATATAGTCAAAGCTGACTTGAAATaGACCATACTCAGGGATGTT | + |
|
Preference number: 5 (lower is better) Translates to: THIIPQNPCVCPGSNYIVKADLK*TILRDV Trigger: AACATCCCTGAGTATGGTCAATTTCAAGTCAGCTTT...GACTATATAGTTAGATCCTGGACACACACATGGATTTTGAGGAATGATGTGAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000479035.7 |
||
| CDS CCA 72 bp | ACTTTCGAGGGCCCTGGCAGTGCTCTCGCGGTGGCCTaGCTCTCTCTCTCCGGCCTGAAGGAGAGCAAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: TFEGPGSALAVA*LSLSGLKESKA Trigger: CGCTTTGCTCTCCTTCAGGCCGGAGAGAGAGAGCCAGGCCACCGCGAGAGCACTGCCAGGGCCCTCGAAAGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378096.3 ENST00000577760.1 |
||
| CDS GCA 72 bp | CCTAGGGCCACCGCTCCTGACGAATCCGCCAGCCACTaGACGACAGATGGTGGAGGATCCTCCAGAAACAAA | + |
|
Preference number: 6 (lower is better) Translates to: PRATAPDESASH*TTDGGGSSRNK Trigger: TTTGTTTCTGGAGGATCCTCCACCATCTGTCGTGCAGTGGCTGGCGGATTCGTCAGGAGCGGTGGCCCTAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000577760.1 |
||
| CDS TCA 72 bp | GAAGTGTTCGGAGCTCTGGTCTGTCCCACCACTGACTaGGACCAACAATCCACCCTCCTGCCATCTCATCTA | + |
|
Preference number: 6 (lower is better) Translates to: EVFGALVCPTTD*DQQSTLLPSHL Trigger: TAGATGAGATGGCAGGAGGGTGGATTGTTGGTCTCAGTCAGTGGTGGGACAGACCAGAGCTCCGAACACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577760.1 ENST00000584912.5 |
||
| CDS CAA 90 bp | CCCTCCCTCCACTCACTGCCCAAGCAGTTAGTCCGCAAGAACGCCTaGTCACACCACCGATTGAAGCAAACAACACATGTTGCCACTTCA | + |
|
Preference number: 6 (lower is better) Translates to: PSLHSLPKQLVRKNA*SHHRLKQTTHVATS Trigger: TGAAGTGGCAACATGTGTTGTTTGCTTCAATCGGTGGTGTGACAAGGCGTTCTTGCGGACTAACTGCTTGGGCAGTGAGTGGAGGGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577760.1 ENST00000584056.1 |
||
| CDS CAA 90 bp | CAACAATCCACCCTCCTGCCATCTCATCTACAAAGTGAAGGCCATTaGCTCTGCTCTTCTCTGACAGCTCCCTGGGCCACCAATCAGACC | + |
|
Preference number: 6 (lower is better) Translates to: QQSTLLPSHLQSEGH*LCSSLTAPWATNQT Trigger: GGTCTGATTGGTGGCCCAGGGAGCTGTCAGAGAAGAGCAGAGCAAATGGCCTTCACTTTGTAGATGAGATGGCAGGAGGGTGGATTGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577760.1 ENST00000584912.5 |
||
| CDS CAA 90 bp | CTGCCCAAGCAGTTAGTCCGCAAGAACGCCTTGTCACACCACCGATaGAAGCAAACAACACATGTTGCCACTTCACCCAAAAGCGATGTT | + |
|
Preference number: 6 (lower is better) Translates to: LPKQLVRKNALSHHR*KQTTHVATSPKSDV Trigger: AACATCGCTTTTGGGTGAAGTGGCAACATGTGTTGTTTGCTTCAATCGGTGGTGTGACAAGGCGTTCTTGCGGACTAACTGCTTGGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000577760.1 ENST00000584056.1 |
||
| CDS CAA 72 bp | CACTCACTGCCCAAGCAGTTAGTCCGCAAGAACGCCTaGTCACACCACCGATTGAAGCAAACAACACATGTT | + |
|
Preference number: 6 (lower is better) Translates to: HSLPKQLVRKNA*SHHRLKQTTHV Trigger: AACATGTGTTGTTTGCTTCAATCGGTGGTGTGACAAGGCGTTCTTGCGGACTAACTGCTTGGGCAGTGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577760.1 ENST00000584056.1 |
||
| CDS GCA 72 bp | TTAGCTCGCTCGGATTTTACTTATGCCGTCCCCATGTaGCACCCGATTCTCACGGAAAGTAGCCTATTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LARSDFTYAVPM*HPILTESSLFL Trigger: AAGAAATAGGCTACTTTCCGTGAGAATCGGGTGGCACATGGGGACGGCATAAGTAAAATCCGAGCGAGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000577760.1 |
||
| CDS CAA 72 bp | CAGTTAGTCCGCAAGAACGCCTTGTCACACCACCGATaGAAGCAAACAACACATGTTGCCACTTCACCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: QLVRKNALSHHR*KQTTHVATSPK Trigger: TTTGGGTGAAGTGGCAACATGTGTTGTTTGCTTCAATCGGTGGTGTGACAAGGCGTTCTTGCGGACTAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000577760.1 ENST00000584056.1 |
||
| CDS CAA 72 bp | GTTCTAAAGCCAGACAGGACACAAGCTGCAAGTATTTaGAGGCCTCCCCCTTTAAATCATACACCTGACAGG | + |
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Preference number: 6 (lower is better) Translates to: VLKPDRTQAASI*RPPPLNHTPDR Trigger: CCTGTCAGGTGTATGATTTAAAGGGGGAGGCCTCAAAATACTTGCAGCTTGTGTCCTGTCTGGCTTTAGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000577760.1 ENST00000584912.5 |
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| CDS CCA 72 bp | TCACAACTAGTTTTAAAACTGAAGTGTTCGGAGCTCTaGTCTGTCCCACCACTGACTGAGACCAACAATCCA | + |
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Preference number: 6 (lower is better) Translates to: SQLVLKLKCSEL*SVPPLTETNNP Trigger: TGGATTGTTGGTCTCAGTCAGTGGTGGGACAGACCAGAGCTCCGAACACTTCAGTTTTAAAACTAGTTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000577760.1 ENST00000584912.5 |
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| CDS GCA 72 bp | AACACCAGAAGTTCTAAAGCCAGACAGGACACAAGCTaGAAGTATTTTGAGGCCTCCCCCTTTAAATCATAC | + |
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Preference number: 6 (lower is better) Translates to: NTRSSKARQDTS*KYFEASPFKSY Trigger: GTATGATTTAAAGGGGGAGGCCTCAAAATACTTGCAGCTTGTGTCCTGTCTGGCTTTAGAACTTCTGGTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000577760.1 ENST00000584912.5 |
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| CDS CCA 72 bp | CCAAGTCCAGCAGTTCAAAGTTACAGTGAGCTTCAGTaGTGTTACTGCACTCCAGCAAATATACTGGAGAAT | + |
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Preference number: 6 (lower is better) Translates to: PSPAVQSYSELQ*CYCTPANILEN Trigger: ATTCTCCAGTATATTTGCTGGAGTGCAGTAACACCACTGAAGCTCACTGTAACTTTGAACTGCTGGACTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000394332.5 |
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| CDS GCA 72 bp | GAAAAAGCCCATGCAATTGCTGAATCACAATCACAGTaGTACCCAGCCCTCAAATGGATATTAATGGTGAAC | + |
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Preference number: 6 (lower is better) Translates to: EKAHAIAESQSQ*YPALKWILMVN Trigger: GTTCACCATTAATATCCATTTGAGGGCTGGGTAGCACTGTGATTGTGATTCAGCAATTGCATGGGCTTTTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000577760.1 ENST00000584912.5 |
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| CDS CAA 90 bp | ACACCAGAAGTTCTAAAGCCAGACAGGACACAAGCTGCAAGTATTTaGAGGCCTCCCCCTTTAAATCATACACCTGACAGGAAAAATTTT | + |
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Preference number: 6 (lower is better) Translates to: TPEVLKPDRTQAASI*RPPPLNHTPDRKNF Trigger: AAAATTTTTCCTGTCAGGTGTATGATTTAAAGGGGGAGGCCTCAAAATACTTGCAGCTTGTGTCCTGTCTGGCTTTAGAACTTCTGGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000577760.1 ENST00000584912.5 |
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| CDS GCA 72 bp | GACATCGAAATTAAGAAACCTAGACGACTCAACCCTTaGTCTAACTTTCGCAAAACGCAATTACTCCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: DIEIKKPRRLNP*SNFRKTQLLLQ Trigger: TTGCAGGAGTAATTGCGTTTTGCGAAAGTTAGAGCAAGGGTTGAGTCGTCTAGGTTTCTTAATTTCGATGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000245857.9 ENST00000577760.1 |
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