RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RPL21 (Homo sapiens)

Ensembl gene IDs: ENSG00000122026

Ensembl transcript IDs: ENST00000319826.8, ENST00000326092.8, ENST00000466550.1, ENST00000473558.5, ENST00000485756.1

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GAAAGAGGCGGGGCCGCGGCGCGCGCCTTACAAGGGCCTGTGGGCTaGCCACGGCGCTGCCTGAGGGAAACGCCAACCGTAAGCGACTTC +
Preference number: 5 (lower is better)
Translates to: ERGGAAARALQGPVG*PRRCLRETPTVSDF
Trigger: GAAGTCGCTTACGGTTGGCGTTTCCCTCAGGCAGCGCCGTGGGCAGCCCACAGGCCCTTGTAAGGCGCGCGCCGCGGCCCCGCCTCTTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473558.5
CDS GCA 90 bp CAGTCCGGTTCTCAGCCCACGGCCCAGACCCGACCCGGCGCACGCTaGTCCCCGTCTGGCAGAACATGGTTTAACCCGCCCATGCCAATG +
Preference number: 5 (lower is better)
Translates to: QSGSQPTAQTRPGAR*SPSGRTWFNPPMPM
Trigger: CATTGGCATGGGCGGGTTAAACCATGTTCTGCCAGACGGGGAGCAGCGTGCGCCGGGTCGGGTCTGGGCCGTGGGCTGAGAACCGGACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319826.8
CDS GCA 90 bp GCCGCGGCGCGCGCCTTACAAGGGCCTGTGGGCTGCCCACGGCGCTaGCTGAGGGAAACGCCAACCGTAAGCGACTTCTTTCTAGGGAAG +
Preference number: 5 (lower is better)
Translates to: AAARALQGPVGCPRR*LRETPTVSDFFLGK
Trigger: CTTCCCTAGAAAGAAGTCGCTTACGGTTGGCGTTTCCCTCAGGCAGCGCCGTGGGCAGCCCACAGGCCCTTGTAAGGCGCGCGCCGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473558.5
CDS CCA 90 bp GCCCAGACCCGACCCGGCGCACGCTGCTCCCCGTCTGGCAGAACATaGTTTAACCCGCCCATGCCAATGGACCTCAAACAGGTTAGAGAG +
Preference number: 5 (lower is better)
Translates to: AQTRPGARCSPSGRT*FNPPMPMDLKQVRE
Trigger: CTCTCTAACCTGTTTGAGGTCCATTGGCATGGGCGGGTTAAACCATGTTCTGCCAGACGGGGAGCAGCGTGCGCCGGGTCGGGTCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319826.8
CDS GCA 90 bp GCGCACGCTGCTCCCCGTCTGGCAGAACATGGTTTAACCCGCCCATaGCAATGGACCTCAAACAGGTTAGAGAGTCTCCCCACGGTCCCA +
Preference number: 5 (lower is better)
Translates to: AHAAPRLAEHGLTRP*QWTSNRLESLPTVP
Trigger: TGGGACCGTGGGGAGACTCTCTAACCTGTTTGAGGTCCATTGGCATGGGCGGGTTAAACCATGTTCTGCCAGACGGGGAGCAGCGTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319826.8
CDS TCA 90 bp TCAAACAGGTTAGAGAGTCTCCCCACGGTCCCAATGAACGACCTCTaGGGCCACAAGGTCGCGGTTCAAGTCTGTCGAACACCTAGCGCC +
Preference number: 5 (lower is better)
Translates to: SNRLESLPTVPMNDL*GHKVAVQVCRTPSA
Trigger: GGCGCTAGGTGTTCGACAGACTTGAACCGCGACCTTGTGGCCTCAGAGGTCGTTCATTGGGACCGTGGGGAGACTCTCTAACCTGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319826.8
ENST00000326092.8
CDS CCA 90 bp GCTGCTCCCCGTCTGGCAGAACATGGTTTAACCCGCCCATGCCAATaGACCTCAAACAGGTTAGAGAGTCTCCCCACGGTCCCAATGAAC +
Preference number: 5 (lower is better)
Translates to: AAPRLAEHGLTRPCQ*TSNRLESLPTVPMN
Trigger: GTTCATTGGGACCGTGGGGAGACTCTCTAACCTGTTTGAGGTCCATTGGCATGGGCGGGTTAAACCATGTTCTGCCAGACGGGGAGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319826.8
CDS GCA 90 bp TCGTCTCTGAGAACACAGAAAGTCTGTGAGGATATTTTCCCCTCTTaGGAAAGAAAGGCAACCGGCCAACACAAGCTGACACTTGCATCG +
Preference number: 5 (lower is better)
Translates to: SSLRTQKVCEDIFPS*ERKATGQHKLTLAS
Trigger: CGATGCAAGTGTCAGCTTGTGTTGGCCGGTTGCCTTTCTTTCGCAAGAGGGGAAAATATCCTCACAGACTTTCTGTGTTCTCAGAGACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473558.5
CDS TCA 90 bp TTCTTTCTAGGGAAGAAGATCGTCTCTGAGAACACAGAAAGTCTGTaGGGATATTTTCCCCTCTTGCGAAAGAAAGGCAACCGGCCAACA +
Preference number: 5 (lower is better)
Translates to: FFLGKKIVSENTESL*GYFPLLRKKGNRPT
Trigger: TGTTGGCCGGTTGCCTTTCTTTCGCAAGAGGGGAAAATATCCTCACAGACTTTCTGTGTTCTCAGAGACGATCTTCTTCCCTAGAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473558.5
CDS TCA 90 bp AACGCCAACCGTAAGCGACTTCTTTCTAGGGAAGAAGATCGTCTCTaGGAACACAGAAAGTCTGTGAGGATATTTTCCCCTCTTGCGAAA +
Preference number: 5 (lower is better)
Translates to: NANRKRLLSREEDRL*EHRKSVRIFSPLAK
Trigger: TTTCGCAAGAGGGGAAAATATCCTCACAGACTTTCTGTGTTCTCAGAGACGATCTTCTTCCCTAGAAAGAAGTCGCTTACGGTTGGCGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473558.5
CDS GCA 72 bp GGGGCCGCGGCGCGCGCCTTACAAGGGCCTGTGGGCTaGCCACGGCGCTGCCTGAGGGAAACGCCAACCGTA +
Preference number: 6 (lower is better)
Translates to: GAAARALQGPVG*PRRCLRETPTV
Trigger: TACGGTTGGCGTTTCCCTCAGGCAGCGCCGTGGGCAGCCCACAGGCCCTTGTAAGGCGCGCGCCGCGGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473558.5
CDS GCA 72 bp TCTCAGCCCACGGCCCAGACCCGACCCGGCGCACGCTaGTCCCCGTCTGGCAGAACATGGTTTAACCCGCCC +
Preference number: 6 (lower is better)
Translates to: SQPTAQTRPGAR*SPSGRTWFNPP
Trigger: GGGCGGGTTAAACCATGTTCTGCCAGACGGGGAGCAGCGTGCGCCGGGTCGGGTCTGGGCCGTGGGCTGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319826.8
CDS GCA 72 bp CGCGCCTTACAAGGGCCTGTGGGCTGCCCACGGCGCTaGCTGAGGGAAACGCCAACCGTAAGCGACTTCTTT +
Preference number: 6 (lower is better)
Translates to: RALQGPVGCPRR*LRETPTVSDFF
Trigger: AAAGAAGTCGCTTACGGTTGGCGTTTCCCTCAGGCAGCGCCGTGGGCAGCCCACAGGCCCTTGTAAGGCGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473558.5
CDS CCA 72 bp CGACCCGGCGCACGCTGCTCCCCGTCTGGCAGAACATaGTTTAACCCGCCCATGCCAATGGACCTCAAACAG +
Preference number: 6 (lower is better)
Translates to: RPGARCSPSGRT*FNPPMPMDLKQ
Trigger: CTGTTTGAGGTCCATTGGCATGGGCGGGTTAAACCATGTTCTGCCAGACGGGGAGCAGCGTGCGCCGGGTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319826.8
CDS TCA 72 bp TTAGAGAGTCTCCCCACGGTCCCAATGAACGACCTCTaGGGCCACAAGGTCGCGGTTCAAGTCTGTCGAACA +
Preference number: 6 (lower is better)
Translates to: LESLPTVPMNDL*GHKVAVQVCRT
Trigger: TGTTCGACAGACTTGAACCGCGACCTTGTGGCCTCAGAGGTCGTTCATTGGGACCGTGGGGAGACTCTCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319826.8
ENST00000326092.8
CDS CCA 72 bp CGTCTGGCAGAACATGGTTTAACCCGCCCATGCCAATaGACCTCAAACAGGTTAGAGAGTCTCCCCACGGTC +
Preference number: 6 (lower is better)
Translates to: RLAEHGLTRPCQ*TSNRLESLPTV
Trigger: GACCGTGGGGAGACTCTCTAACCTGTTTGAGGTCCATTGGCATGGGCGGGTTAAACCATGTTCTGCCAGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319826.8
CDS GCA 72 bp AGAACACAGAAAGTCTGTGAGGATATTTTCCCCTCTTaGGAAAGAAAGGCAACCGGCCAACACAAGCTGACA +
Preference number: 6 (lower is better)
Translates to: RTQKVCEDIFPS*ERKATGQHKLT
Trigger: TGTCAGCTTGTGTTGGCCGGTTGCCTTTCTTTCGCAAGAGGGGAAAATATCCTCACAGACTTTCTGTGTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473558.5
CDS CCA 72 bp ACTGGCAAAGTGAAAAGGGGGTATATGAGGGAATACTaGTTAGCCACAAAGAACTACAACACTACTTACTTA +
Preference number: 6 (lower is better)
Translates to: TGKVKRGYMREY*LATKNYNTTYL
Trigger: TAAGTAAGTAGTGTTGTAGTTCTTTGTGGCTAACCAGTATTCCCTCATATACCCCCTTTTCACTTTGCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000466550.1
CDS TCA 72 bp TCTTTCAAATGGCAACTCAAGAGCTTTCAGAGCCGGTaGAATGTGTTTTTCACATTGCTTCAAGCAATCAAA +
Preference number: 6 (lower is better)
Translates to: SFKWQLKSFQSR*NVFFTLLQAIK
Trigger: TTTGATTGCTTGAAGCAATGTGAAAAACACATTTCACCGGCTCTGAAAGCTCTTGAGTTGCCATTTGAAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485756.1