Pregenerated sensors for RPL19 (Homo sapiens)
Ensembl gene IDs: ENSG00000108298Ensembl transcript IDs: ENST00000577741.2, ENST00000579260.5, ENST00000585199.2, ENST00000678012.1, ENST00000678147.1, ENST00000678189.1, ENST00000678573.1, ENST00000678609.1, ENST00000678791.1, ENST00000679038.1
Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | ACCTCACTCAGTAACCGTAAACCTTGCAAGAAGCAGAGAGGAAGGCAGATTAAGAGTAACCGTAAACCTTaGAAGAAGCAGAGAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSLSNRKPCKKQRGRQIKSNRKP*KKQRGR Trigger: CCTTCCTCTCTGCTTCTTGCAAGGTTTACGGTTACT...CTTAATCTGCCTTCCTCTCTGCTTCTTGCAAGGTTTACGGTTACTGAGTGAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000678012.1 ENST00000678147.1 ENST00000678609.1 ENST00000679038.1 |
||
| CDS-3UTR GCA 90 bp | AAACCTCACTCAGTAACCGTAAACCTTGCAAGAAGCAGAGAGGAAGGCAGATTAAGTAACCGTAAACCTTaGAAGAAGCAGAGAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPHSVTVNLARSREEGRLSNRKP*KKQRGR Trigger: CCTTCCTCTCTGCTTCTTGCAAGGTTTACGGTTACT...TAATCTGCCTTCCTCTCTGCTTCTTGCAAGGTTTACGGTTACTGAGTGAGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000678012.1 ENST00000678147.1 ENST00000678609.1 ENST00000679038.1 |
||
| CDS CCA 90 bp | AGGGCCCACGGCTTGGTCTTGTTCGCTCCGTTTGCTCTGCTCGCGTaGGTCGACCGGACACGTGTGCGGTGCGGCACCAGCCGGGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RAHGLVLFAPFALLA*VDRTRVRCGTSRGR Trigger: TCTGCCCCGGCTGGTGCCGCACCGCACACGTGTCCGGTCGACCCACGCGAGCAGAGCAAACGGAGCGAACAAGACCAAGCCGTGGGCCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000579260.5 ENST00000678573.1 ENST00000678791.1 |
||
| CDS GCA 90 bp | GCTCCGTTTGCTCTGCTCGCGTGGGTCGACCGGACACGTGTGCGGTaGGGCACCAGCCGGGGCAGACTTTTCCTGGTCTCAGTTGCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: APFALLAWVDRTRVR*GTSRGRLFLVSVAA Trigger: CGCAGCAACTGAGACCAGGAAAAGTCTGCCCCGGCTGGTGCCGCACCGCACACGTGTCCGGTCGACCCACGCGAGCAGAGCAAACGGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000579260.5 ENST00000678573.1 ENST00000678791.1 |
||
| CDS GCA 90 bp | AGCAAGAAAGGGCCCACGGCTTGGTCTTGTTCGCTCCGTTTGCTCTaGTCGCGTGGGTCGACCGGACACGTGTGCGGTGCGGCACCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: SKKGPTAWSCSLRLL*SRGSTGHVCGAAPA Trigger: GGCTGGTGCCGCACCGCACACGTGTCCGGTCGACCCACGCGAGCAGAGCAAACGGAGCGAACAAGACCAAGCCGTGGGCCCTTTCTTGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000579260.5 ENST00000678573.1 ENST00000678791.1 |
||
| CDS GCA 90 bp | TGTTCGCTCCGTTTGCTCTGCTCGCGTGGGTCGACCGGACACGTGTaGGGTGCGGCACCAGCCGGGGCAGACTTTTCCTGGTCTCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CSLRLLCSRGSTGHV*GAAPAGADFSWSQL Trigger: CAACTGAGACCAGGAAAAGTCTGCCCCGGCTGGTGCCGCACCGCACACGTGTCCGGTCGACCCACGCGAGCAGAGCAAACGGAGCGAACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000579260.5 ENST00000678573.1 ENST00000678791.1 |
||
| CDS GCA 90 bp | TGCCAAGCAAGAAAGGGCCCACGGCTTGGTCTTGTTCGCTCCGTTTaGTCTGCTCGCGTGGGTCGACCGGACACGTGTGCGGTGCGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: CQARKGPRLGLVRSV*SARVGRPDTCAVRH Trigger: GTGCCGCACCGCACACGTGTCCGGTCGACCCACGCGAGCAGAGCAAACGGAGCGAACAAGACCAAGCCGTGGGCCCTTTCTTGCTTGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000579260.5 ENST00000678573.1 ENST00000678791.1 |
||
| CDS CCA 90 bp | ATCGGCTCCGCTCCGGGTGTGCCAAGCAAGAAAGGGCCCACGGCTTaGTCTTGTTCGCTCCGTTTGCTCTGCTCGCGTGGGTCGACCGGA | + |
|
Preference number: 5 (lower is better) Translates to: IGSAPGVPSKKGPTA*SCSLRLLCSRGSTG Trigger: TCCGGTCGACCCACGCGAGCAGAGCAAACGGAGCGAACAAGACCAAGCCGTGGGCCCTTTCTTGCTTGGCACACCCGGAGCGGAGCCGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000579260.5 ENST00000678573.1 ENST00000678791.1 |
||
| CDS TCA 90 bp | GCAGTCGGAGGCCTGGGGCCTACACTAGGCTTGCCCTACATCACGTaGAAGCAGAGATCGGCTCCGCTCCGGGTGTGCCAAGCAAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: AVGGLGPTLGLPYIT*KQRSAPLRVCQARK Trigger: CTTTCTTGCTTGGCACACCCGGAGCGGAGCCGATCTCTGCTTTCACGTGATGTAGGGCAAGCCTAGTGTAGGCCCCAGGCCTCCGACTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000579260.5 ENST00000678573.1 ENST00000678791.1 |
||
| CDS GCA 90 bp | TATGCAGCTGGCCCCCTTGGGTTTAAGACTTCAAAACCCACGCTATaGCTTCACCTCTCGGAGCCTCATGTTCGCATTTCTCCTCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: YAAGPLGFKTSKPTL*LHLSEPHVRISPLE Trigger: TTCCAGAGGAGAAATGCGAACATGAGGCTCCGAGAGGTGAAGGCATAGCGTGGGTTTTGAAGTCTTAAACCCAAGGGGGCCAGCTGCATA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000585199.2 ENST00000678573.1 ENST00000678791.1 |
||
| CDS TCA 90 bp | CGTTCGGCTATTCGCAGAGATTTCCTTTATGAGAGGCCAAAGGAGTaGATGGAGTCAAGAGTTAGAGATCACCTCTCTCGGCAGTCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RSAIRRDFLYERPKE*MESRVRDHLSRQSE Trigger: CTCCGACTGCCGAGAGAGGTGATCTCTAACTCTTGACTCCATTCACTCCTTTGGCCTCTCATAAAGGAAATCTCTGCGAATAGCCGAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678573.1 ENST00000678791.1 |
||
| CDS CCA 90 bp | CACAGCCGCGAAATAAGACTCTTCCCTAAATCATCTTTAAGGCTCTaGGCTATGCAGCTGGCCCCCTTGGGTTTAAGACTTCAAAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: HSREIRLFPKSSLRL*AMQLAPLGLRLQNP Trigger: TGGGTTTTGAAGTCTTAAACCCAAGGGGGCCAGCTGCATAGCCCAGAGCCTTAAAGATGATTTAGGGAAGAGTCTTATTTCGCGGCTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000585199.2 ENST00000678189.1 ENST00000678573.1 ENST00000678791.1 |
||
| CDS CCA 90 bp | TCACAGAGTCCAAATAGGCCAGGCCAGAGACACTGCTCACATTCTTaGCCCCACGGTCTCAAAAAGGATGGAAACACTGGAACTTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SQSPNRPGQRHCSHS*PHGLKKDGNTGTYF Trigger: GAAATAAGTTCCAGTGTTTCCATCCTTTTTGAGACCGTGGGGCCAAGAATGTGAGCAGTGTCTCTGGCCTGGCCTATTTGGACTCTGTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000678189.1 ENST00000678791.1 |
||
| CDS TCA 90 bp | CTGAAGCCTGAGCATACTAGACACACAGAAAACATGATTAGACTCTaGAAGCCAATCCTGGGCAAGAATGAACGTCCCCATCAAGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: LKPEHTRHTENMIRL*KPILGKNERPHQDL Trigger: CAGGTCTTGATGGGGACGTTCATTCTTGCCCAGGATTGGCTTTCAGAGTCTAATCATGTTTTCTGTGTGTCTAGTATGCTCAGGCTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000585199.2 ENST00000678189.1 ENST00000678573.1 ENST00000678791.1 |
||
| CDS TCA 90 bp | CTCCTACCAGGGATACTCTCAATTCCAATACCAGCACCAACTTTCTaGTTTGCACACAGGCAGAAAACACATCAAATATCAAGGAGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: LLPGILSIPIPAPTF*FAHRQKTHQISRSK Trigger: CTTACTCCTTGATATTTGATGTGTTTTCTGCCTGTGTGCAAATCAGAAAGTTGGTGCTGGTATTGGAATTGAGAGTATCCCTGGTAGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577741.2 ENST00000585199.2 ENST00000678189.1 ENST00000678791.1 |
||
| CDS TCA 90 bp | GGGTTATGCCATTTCTGGTACTCAGCGTTTAAAGAATATTCGAGGTaGGTAGACCTGATTTCTAGTCTAGGAATGCAGGCAAGTTACTCT | + |
|
Preference number: 5 (lower is better) Translates to: GLCHFWYSAFKEYSR*VDLISSLGMQASYS Trigger: AGAGTAACTTGCCTGCATTCCTAGACTAGAAATCAGGTCTACTCACCTCGAATATTCTTTAAACGCTGAGTACCAGAAATGGCATAACCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678573.1 ENST00000678791.1 |
||
| CDS GCA 72 bp | GCTCTGCTCGCGTGGGTCGACCGGACACGTGTGCGGTaGGGCACCAGCCGGGGCAGACTTTTCCTGGTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: ALLAWVDRTRVR*GTSRGRLFLVS Trigger: TGAGACCAGGAAAAGTCTGCCCCGGCTGGTGCCGCACCGCACACGTGTCCGGTCGACCCACGCGAGCAGAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000579260.5 ENST00000678573.1 ENST00000678791.1 |
||
| CDS GCA 72 bp | CGTTTGCTCTGCTCGCGTGGGTCGACCGGACACGTGTaGGGTGCGGCACCAGCCGGGGCAGACTTTTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RLLCSRGSTGHV*GAAPAGADFSW Trigger: CCAGGAAAAGTCTGCCCCGGCTGGTGCCGCACCGCACACGTGTCCGGTCGACCCACGCGAGCAGAGCAAACG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000579260.5 ENST00000678573.1 ENST00000678791.1 |
||
| CDS GCA 72 bp | GGGCCCACGGCTTGGTCTTGTTCGCTCCGTTTGCTCTaGTCGCGTGGGTCGACCGGACACGTGTGCGGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: GPTAWSCSLRLL*SRGSTGHVCGA Trigger: CGCACCGCACACGTGTCCGGTCGACCCACGCGAGCAGAGCAAACGGAGCGAACAAGACCAAGCCGTGGGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000579260.5 ENST00000678573.1 ENST00000678791.1 |
||
| CDS CCA 72 bp | GGCTTGGTCTTGTTCGCTCCGTTTGCTCTGCTCGCGTaGGTCGACCGGACACGTGTGCGGTGCGGCACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GLVLFAPFALLA*VDRTRVRCGTS Trigger: GCTGGTGCCGCACCGCACACGTGTCCGGTCGACCCACGCGAGCAGAGCAAACGGAGCGAACAAGACCAAGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000579260.5 ENST00000678573.1 ENST00000678791.1 |
||
| CDS CAA 90 bp | GATCGGCTCCGCTCCGGGTGTGCCAAGCAAGAAAGGGCCCACGGCTaGGTCTTGTTCGCTCCGTTTGCTCTGCTCGCGTGGGTCGACCGG | + |
|
Preference number: 6 (lower is better) Translates to: DRLRSGCAKQERAHG*VLFAPFALLAWVDR Trigger: CCGGTCGACCCACGCGAGCAGAGCAAACGGAGCGAACAAGACCAAGCCGTGGGCCCTTTCTTGCTTGGCACACCCGGAGCGGAGCCGATC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000579260.5 ENST00000678573.1 ENST00000678791.1 |
||
| CDS CAA 90 bp | GTGCCAAGCAAGAAAGGGCCCACGGCTTGGTCTTGTTCGCTCCGTTaGCTCTGCTCGCGTGGGTCGACCGGACACGTGTGCGGTGCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: VPSKKGPTAWSCSLR*LCSRGSTGHVCGAA Trigger: TGCCGCACCGCACACGTGTCCGGTCGACCCACGCGAGCAGAGCAAACGGAGCGAACAAGACCAAGCCGTGGGCCCTTTCTTGCTTGGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000579260.5 ENST00000678573.1 ENST00000678791.1 |
||
| CDS CAA 90 bp | CTCCGCTCCGGGTGTGCCAAGCAAGAAAGGGCCCACGGCTTGGTCTaGTTCGCTCCGTTTGCTCTGCTCGCGTGGGTCGACCGGACACGT | + |
|
Preference number: 6 (lower is better) Translates to: LRSGCAKQERAHGLV*FAPFALLAWVDRTR Trigger: ACGTGTCCGGTCGACCCACGCGAGCAGAGCAAACGGAGCGAACAAGACCAAGCCGTGGGCCCTTTCTTGCTTGGCACACCCGGAGCGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000579260.5 ENST00000678573.1 ENST00000678791.1 |
||
| CDS GCA 72 bp | AGAAAGGGCCCACGGCTTGGTCTTGTTCGCTCCGTTTaGTCTGCTCGCGTGGGTCGACCGGACACGTGTGCG | + |
|
Preference number: 6 (lower is better) Translates to: RKGPRLGLVRSV*SARVGRPDTCA Trigger: CGCACACGTGTCCGGTCGACCCACGCGAGCAGAGCAAACGGAGCGAACAAGACCAAGCCGTGGGCCCTTTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000579260.5 ENST00000678573.1 ENST00000678791.1 |
||
| CDS CCA 72 bp | GCTCCGGGTGTGCCAAGCAAGAAAGGGCCCACGGCTTaGTCTTGTTCGCTCCGTTTGCTCTGCTCGCGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: APGVPSKKGPTA*SCSLRLLCSRG Trigger: CCCACGCGAGCAGAGCAAACGGAGCGAACAAGACCAAGCCGTGGGCCCTTTCTTGCTTGGCACACCCGGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000579260.5 ENST00000678573.1 ENST00000678791.1 |
||
| CDS CAA 72 bp | CGCTCCGGGTGTGCCAAGCAAGAAAGGGCCCACGGCTaGGTCTTGTTCGCTCCGTTTGCTCTGCTCGCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RSGCAKQERAHG*VLFAPFALLAW Trigger: CCACGCGAGCAGAGCAAACGGAGCGAACAAGACCAAGCCGTGGGCCCTTTCTTGCTTGGCACACCCGGAGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000579260.5 ENST00000678573.1 ENST00000678791.1 |
||
| CDS TCA 72 bp | GGCCTGGGGCCTACACTAGGCTTGCCCTACATCACGTaGAAGCAGAGATCGGCTCCGCTCCGGGTGTGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: GLGPTLGLPYIT*KQRSAPLRVCQ Trigger: TTGGCACACCCGGAGCGGAGCCGATCTCTGCTTTCACGTGATGTAGGGCAAGCCTAGTGTAGGCCCCAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000579260.5 ENST00000678573.1 ENST00000678791.1 |
||
| CDS CAA 72 bp | AAGAAAGGGCCCACGGCTTGGTCTTGTTCGCTCCGTTaGCTCTGCTCGCGTGGGTCGACCGGACACGTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: KKGPTAWSCSLR*LCSRGSTGHVC Trigger: GCACACGTGTCCGGTCGACCCACGCGAGCAGAGCAAACGGAGCGAACAAGACCAAGCCGTGGGCCCTTTCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000579260.5 ENST00000678573.1 ENST00000678791.1 |
||
| CDS CAA 72 bp | GGGTGTGCCAAGCAAGAAAGGGCCCACGGCTTGGTCTaGTTCGCTCCGTTTGCTCTGCTCGCGTGGGTCGAC | + |
|
Preference number: 6 (lower is better) Translates to: GCAKQERAHGLV*FAPFALLAWVD Trigger: GTCGACCCACGCGAGCAGAGCAAACGGAGCGAACAAGACCAAGCCGTGGGCCCTTTCTTGCTTGGCACACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000579260.5 ENST00000678573.1 ENST00000678791.1 |
||
| CDS TCA 72 bp | GCAAGAATGAACGTCCCCATCAAGACCTGCCCTTTGTaGCCCACACCACAGCCGCGAAATAAGACTCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: ARMNVPIKTCPL*PTPQPRNKTLP Trigger: GGGAAGAGTCTTATTTCGCGGCTGTGGTGTGGGTCACAAAGGGCAGGTCTTGATGGGGACGTTCATTCTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000585199.2 ENST00000678189.1 ENST00000678573.1 ENST00000678791.1 |
||
| CDS TCA 72 bp | CAGGGAAGAGAAAAGACGGGTCAGTTTGGGAAGAGATaGGATGCTAGGGAGACAGAAGCACATCCCCAGACC | + |
|
Preference number: 6 (lower is better) Translates to: QGREKTGQFGKR*DARETEAHPQT Trigger: GGTCTGGGGATGTGCTTCTGTCTCCCTAGCATCTCATCTCTTCCCAAACTGACCCGTCTTTTCTCTTCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000678189.1 |
||
| CDS GCA 72 bp | GGCCCCCTTGGGTTTAAGACTTCAAAACCCACGCTATaGCTTCACCTCTCGGAGCCTCATGTTCGCATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GPLGFKTSKPTL*LHLSEPHVRIS Trigger: AGAAATGCGAACATGAGGCTCCGAGAGGTGAAGGCATAGCGTGGGTTTTGAAGTCTTAAACCCAAGGGGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000585199.2 ENST00000678573.1 ENST00000678791.1 |
||
| CDS CCA 72 bp | CCAAATAGGCCAGGCCAGAGACACTGCTCACATTCTTaGCCCCACGGTCTCAAAAAGGATGGAAACACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PNRPGQRHCSHS*PHGLKKDGNTG Trigger: TCCAGTGTTTCCATCCTTTTTGAGACCGTGGGGCCAAGAATGTGAGCAGTGTCTCTGGCCTGGCCTATTTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000678189.1 ENST00000678791.1 |
||
| CDS TCA 72 bp | AACTCTCAAAGGTCTAAGAATGTTCCCCTAAGACTCTaGAAAGAAACTTACGCCAGGAGCTTCTTGCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: NSQRSKNVPLRL*KETYARSFLRA Trigger: GGCCCGCAAGAAGCTCCTGGCGTAAGTTTCTTTTCAGAGTCTTAGGGGAACATTCTTAGACCTTTGAGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000678189.1 |
||
| CDS CCA 72 bp | GAAATAAGACTCTTCCCTAAATCATCTTTAAGGCTCTaGGCTATGCAGCTGGCCCCCTTGGGTTTAAGACTT | + |
|
Preference number: 6 (lower is better) Translates to: EIRLFPKSSLRL*AMQLAPLGLRL Trigger: AAGTCTTAAACCCAAGGGGGCCAGCTGCATAGCCCAGAGCCTTAAAGATGATTTAGGGAAGAGTCTTATTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENST00000585199.2 ENST00000678189.1 ENST00000678573.1 ENST00000678791.1 |
||
| CDS TCA 72 bp | CATTTCTGGTACTCAGCGTTTAAAGAATATTCGAGGTaGGTAGACCTGATTTCTAGTCTAGGAATGCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: HFWYSAFKEYSR*VDLISSLGMQA Trigger: TGCCTGCATTCCTAGACTAGAAATCAGGTCTACTCACCTCGAATATTCTTTAAACGCTGAGTACCAGAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000678573.1 ENST00000678791.1 |
||
| CDS CAA 90 bp | TACCAGGGATACTCTCAATTCCAATACCAGCACCAACTTTCTGATTaGCACACAGGCAGAAAACACATCAAATATCAAGGAGTAAGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: YQGYSQFQYQHQLSD*HTGRKHIKYQGVRN Trigger: GTTTCTTACTCCTTGATATTTGATGTGTTTTCTGCCTGTGTGCAAATCAGAAAGTTGGTGCTGGTATTGGAATTGAGAGTATCCCTGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577741.2 ENST00000585199.2 ENST00000678189.1 ENST00000678791.1 |
||
| CDS CAA 72 bp | TACTCTCAATTCCAATACCAGCACCAACTTTCTGATTaGCACACAGGCAGAAAACACATCAAATATCAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: YSQFQYQHQLSD*HTGRKHIKYQG Trigger: TCCTTGATATTTGATGTGTTTTCTGCCTGTGTGCAAATCAGAAAGTTGGTGCTGGTATTGGAATTGAGAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000577741.2 ENST00000585199.2 ENST00000678189.1 ENST00000678791.1 |
||
| CDS TCA 72 bp | TATGAAAGCACACTCAAAAGAACAAGCCTGATACAATaGCTCCTCCATTTTATAGACACTCTGAATGAACTT | + |
|
Preference number: 6 (lower is better) Translates to: YESTLKRTSLIQ*LLHFIDTLNEL Trigger: AAGTTCATTCAGAGTGTCTATAAAATGGAGGAGTCATTGTATCAGGCTTGTTCTTTTGAGTGTGCTTTCATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000678189.1 ENST00000678791.1 |
||