Pregenerated sensors for RPL18 (Homo sapiens)
Ensembl gene IDs: ENSG00000063177Ensembl transcript IDs: ENST00000547892.1, ENST00000549273.5, ENST00000549533.1, ENST00000550671.1, ENST00000550973.5, ENST00000551749.5, ENST00000552347.5, ENST00000552705.5, ENST00000552851.1
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACAGGAACACCACAAGCCTGTCACATTCAGCCCCAGGAGAGTCAATaGTGCTGGAAAAGCTTGGCAGAGTGGGAAGCCAAGGAGCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: TGTPQACHIQPQESQ*CWKSLAEWEAKEPG Trigger: TCCTGGCTCCTTGGCTTCCCACTCTGCCAAGCTTTTCCAGCAGCATTGACTCTCCTGGGGCTGAATGTGACAGGCTTGTGGTGTTCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| 3UTR-3UTR CCA 90 bp | GGGGCCCTCTTAAAGGAGGCCATTGTGGAGTGGCACAGGAACACCACAAGCCTGGGTCCCAGCCTGGGCTaGCAAAGGCCGGTGAACTGC | + |
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Preference number: 2 (lower is better) Translates to: GALLKEAIVEWHRNTTSLGPSLG*QRPVNC Trigger: GCAGTTCACCGGCCTTTGCCAGCCCAGGCTGGGACC...CAGGCTTGTGGTGTTCCTGTGCCACTCCACAATGGCCTCCTTTAAGAGGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| 3UTR-3UTR CCA 90 bp | GGCCCTCTTAAAGGAGGCCATTGTGGAGTGGCACAGGAACACCACAAGCCTGTCACCTGCCCCACCACCTaGAGGGTCCCAGCCTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: GPLKGGHCGVAQEHHKPVTCPTT*RVPAWA Trigger: AGCCCAGGCTGGGACCCTCCAGGTGGTGGGGCAGGT...GACAGGCTTGTGGTGTTCCTGTGCCACTCCACAATGGCCTCCTTTAAGAGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| 3UTR-3UTR TCA 90 bp | AACACCACAAGCCTGTCACATTCAGCCCCAGGAGAGTCAATGCTGCTGGAAAAGCCTGGCCCTGCAGGCTaGGTCTGGGGAGAGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: NTTSLSHSAPGESMLLEKPGPAG*VWGEGR Trigger: CCTGCCCTCTCCCCAGACTCAGCCTGCAGGGCCAGG...CTTTTCCAGCAGCATTGACTCTCCTGGGGCTGAATGTGACAGGCTTGTGGTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| 3UTR-3UTR CCA 90 bp | CTCAGGCCCTGGAAAACACAGCTCCAAGCAGTGTTGAAGGGAAAAGCAGGCAGGAAGTGTGGCCAGGCCTaGCCCTGCAGGCTGAGTCTG | + |
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Preference number: 2 (lower is better) Translates to: LRPWKTQLQAVLKGKAGRKCGQA*PCRLSL Trigger: CAGACTCAGCCTGCAGGGCCAGGCCTGGCCACACTT...CCTGCCTGCTTTTCCCTTCAACACTGCTTGGAGCTGTGTTTTCCAGGGCCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| 3UTR-3UTR CCA 90 bp | GCACAGGAACACCACAAGCCTGTCACATTCAGCCCCAGGAGAGTCAATGCTGCTCAGAAGGCCTGGGGCTaGCTGGTACGAGGGATAGGA | + |
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Preference number: 2 (lower is better) Translates to: AQEHHKPVTFSPRRVNAAQKAWG*LVRGIG Trigger: TCCTATCCCTCGTACCAGCCAGCCCCAGGCCTTCTG...AGCAGCATTGACTCTCCTGGGGCTGAATGTGACAGGCTTGTGGTGTTCCTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| 3UTR-3UTR TCA 90 bp | GGGGCCCTCTTAAAGGAGGCCATTGTGGAGTGGCACAGGAACACCACAAGCCTGAGCTCCAAGCAGTGTTaGAGGGAAAAGCAGGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: GALLKEAIVEWHRNTTSLSSKQC*REKQAG Trigger: TCCTGCCTGCTTTTCCCTTCAACACTGCTTGGAGCT...CAGGCTTGTGGTGTTCCTGTGCCACTCCACAATGGCCTCCTTTAAGAGGGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| 3UTR-3UTR GCA 90 bp | AGGAACACCACAAGCCTGTCACATTCAGCCCCAGGAGAGTCAATGCTGCTGGAAATGCTCCCCAGGAGATaGCTGCTCAGGCCCTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: RNTTSLSHSAPGESMLLEMLPRR*LLRPWK Trigger: TTTCCAGGGCCTGAGCAGGCATCTCCTGGGGAGCAT...TTCCAGCAGCATTGACTCTCCTGGGGCTGAATGTGACAGGCTTGTGGTGTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| 3UTR-3UTR CAA 90 bp | GGAGAGTCAATGCTGCTGGAAAAGCTTGGCAGAGTGGGAAGCCAAGGAGCCAGGCAGCTCCAAGCAGTGTaGAAGGGAAAAGCAGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: GESMLLEKLGRVGSQGARQLQAV*KGKAGR Trigger: CCTGCCTGCTTTTCCCTTCAACACTGCTTGGAGCTG...CCTGGCTCCTTGGCTTCCCACTCTGCCAAGCTTTTCCAGCAGCATTGACTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| 3UTR GCA 72 bp | CAAGCCTGTCACATTCAGCCCCAGGAGAGTCAATGCTaGTGGAAAAGCTTGGCAGAGTGGGAAGCCAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: QACHIQPQESQC*WKSLAEWEAKE Trigger: CTCCTTGGCTTCCCACTCTGCCAAGCTTTTCCAGCAGCATTGACTCTCCTGGGGCTGAATGTGACAGGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| 3UTR GCA 72 bp | CCACAAGCCTGTCACATTCAGCCCCAGGAGAGTCAATaGTGCTGGAAAAGCTTGGCAGAGTGGGAAGCCAAG | + |
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Preference number: 3 (lower is better) Translates to: PQACHIQPQESQ*CWKSLAEWEAK Trigger: CTTGGCTTCCCACTCTGCCAAGCTTTTCCAGCAGCATTGACTCTCCTGGGGCTGAATGTGACAGGCTTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| CDS-3UTR TCA 90 bp | TGTCACATTCAGCCCCAGGAGAGTCAATGCTGCTGGAAAAGCTTGGCAGAGTGGCCTGGCCCTGCAGGCTaGGTCTGGGGAGAGGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: CHIQPQESQCCWKSLAEWPGPAG*VWGEGR Trigger: CCTGCCCTCTCCCCAGACTCAGCCTGCAGGGCCAGG...CCACTCTGCCAAGCTTTTCCAGCAGCATTGACTCTCCTGGGGCTGAATGTGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| CDS-3UTR CCA 90 bp | GGAGAGTCAATGCTGCTGGAAAAGCTTGGCAGAGTGGGAAGCCAAGGAGCCAGGGGTCCCAGCCTGGGCTaGCAAAGGCCGGTGAACTGC | + |
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Preference number: 4 (lower is better) Translates to: GESMLLEKLGRVGSQGARGPSLG*QRPVNC Trigger: GCAGTTCACCGGCCTTTGCCAGCCCAGGCTGGGACC...CCTGGCTCCTTGGCTTCCCACTCTGCCAAGCTTTTCCAGCAGCATTGACTCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| CDS-3UTR TCA 90 bp | GGCCCTCTTAAAGGAGGCCATTGTGGAGTGGCACAGGAACACCACAAGCCTGTCGCTGGCAAAGGCCGGTaGACTGCATGCTCCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: GPLKGGHCGVAQEHHKPVAGKGR*TACSPG Trigger: TCCTGGGGAGCATGCAGTTCACCGGCCTTTGCCAGC...GACAGGCTTGTGGTGTTCCTGTGCCACTCCACAATGGCCTCCTTTAAGAGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| CDS-3UTR CCA 90 bp | TGTCACATTCAGCCCCAGGAGAGTCAATGCTGCTGGAAAAGCTTGGCAGAGTGGACCTGCCCCACCACCTaGAGGGTCCCAGCCTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: CHIQPQESQCCWKSLAEWTCPTT*RVPAWA Trigger: AGCCCAGGCTGGGACCCTCCAGGTGGTGGGGCAGGT...CCACTCTGCCAAGCTTTTCCAGCAGCATTGACTCTCCTGGGGCTGAATGTGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| CDS-3UTR CCA 90 bp | GGAGAGTCAATGCTGCTGGAAAAGCTTGGCAGAGTGGGAAGCCAAGGAGCCAGGAGCCAGGAGGGGCTATaGAAGCACCTGCCCCACCAC | + |
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Preference number: 4 (lower is better) Translates to: GESMLLEKLGRVGSQGARSQEGL*KHLPHH Trigger: GTGGTGGGGCAGGTGCTTCCATAGCCCCTCCTGGCT...CCTGGCTCCTTGGCTTCCCACTCTGCCAAGCTTTTCCAGCAGCATTGACTCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| CDS-3UTR GCA 90 bp | CTCAGGCCCTGGAAAACACAGCTCCAAGCAGTGTTGAAGGGAAAAGCAGGCAGGGGCTATGGAAGCACCTaGCCCACCACCTGGAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: LRPWKTQLQAVLKGKAGRGYGST*PTTWRV Trigger: GACCCTCCAGGTGGTGGGGCAGGTGCTTCCATAGCC...CCTGCCTGCTTTTCCCTTCAACACTGCTTGGAGCTGTGTTTTCCAGGGCCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| CDS-3UTR CCA 90 bp | GGAGTGGCACAGGAACACCACAAGCCTGTCACATTCAGCCCCAGGAGAGTCAATGAGTTCCAGAAGGCCTaGGGCTGGCTGGTACGAGGG | + |
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Preference number: 4 (lower is better) Translates to: GVAQEHHKPVTFSPRRVNEFQKA*GWLVRG Trigger: CCCTCGTACCAGCCAGCCCCAGGCCTTCTGGAACTC...ATTGACTCTCCTGGGGCTGAATGTGACAGGCTTGTGGTGTTCCTGTGCCACTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| CDS-3UTR CCA 90 bp | CCTGCTCAGGCCCTGGAAAACACAGCTCCAAGCAGTGTTGAAGGGAAAAGCAGGCAGAAGGCCTGGGGCTaGCTGGTACGAGGGATAGGA | + |
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Preference number: 4 (lower is better) Translates to: PAQALENTAPSSVEGKSRQKAWG*LVRGIG Trigger: TCCTATCCCTCGTACCAGCCAGCCCCAGGCCTTCTG...CCTGCTTTTCCCTTCAACACTGCTTGGAGCTGTGTTTTCCAGGGCCTGAGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| CDS-3UTR GCA 90 bp | CTCAGGCCCTGGAAAACACAGCTCCAAGCAGTGTTGAAGGGAAAAGCAGGCAGGCAAAGGCCGGTGAACTaGATGCTCCCCAGGAGATGC | + |
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Preference number: 4 (lower is better) Translates to: LRPWKTQLQAVLKGKAGRQRPVN*MLPRRC Trigger: GCATCTCCTGGGGAGCATGCAGTTCACCGGCCTTTG...CCTGCCTGCTTTTCCCTTCAACACTGCTTGGAGCTGTGTTTTCCAGGGCCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| CDS-3UTR CCA 90 bp | CTCAGGCCCTGGAAAACACAGCTCCAAGCAGTGTTGAAGGGAAAAGCAGGCAGGGGCCTGATACTCACTTaGTGTGGCTGTGCGGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: LRPWKTQLQAVLKGKAGRGLILT*CGCAGF Trigger: GAACCCCGCACAGCCACACCAAGTGAGTATCAGGCC...CCTGCCTGCTTTTCCCTTCAACACTGCTTGGAGCTGTGTTTTCCAGGGCCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| CDS-3UTR CCA 90 bp | CTCTTAAAGGAGGCCATTGTGGAGTGGCACAGGAACACCACAAGCCTGTCACATAAGTGTGGCCAGGCCTaGCCCTGCAGGCTGAGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLKEAIVEWHRNTTSLSHKCGQA*PCRLSL Trigger: CAGACTCAGCCTGCAGGGCCAGGCCTGGCCACACTT...ATGTGACAGGCTTGTGGTGTTCCTGTGCCACTCCACAATGGCCTCCTTTAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| CDS-3UTR TCA 90 bp | GAGGCCATTGTGGAGTGGCACAGGAACACCACAAGCCTGTCACATTCAGCCCCAAGCTCCAAGCAGTGTTaGAGGGAAAAGCAGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: EAIVEWHRNTTSLSHSAPSSKQC*REKQAG Trigger: TCCTGCCTGCTTTTCCCTTCAACACTGCTTGGAGCT...TGGGGCTGAATGTGACAGGCTTGTGGTGTTCCTGTGCCACTCCACAATGGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| CDS-3UTR CCA 90 bp | CTCAGGCCCTGGAAAACACAGCTCCAAGCAGTGTTGAAGGGAAAAGCAGGCAGGTGCCTGCTCAGGCCCTaGAAAACACAGCTCCAAGCA | + |
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Preference number: 4 (lower is better) Translates to: LRPWKTQLQAVLKGKAGRCLLRP*KTQLQA Trigger: TGCTTGGAGCTGTGTTTTCCAGGGCCTGAGCAGGCA...CCTGCCTGCTTTTCCCTTCAACACTGCTTGGAGCTGTGTTTTCCAGGGCCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| CDS-3UTR CCA 90 bp | GGAGTGGCACAGGAACACCACAAGCCTGTCACATTCAGCCCCAGGAGAGTCAATGAGGCCATTGTGGAGTaGCACAGGAACACCACAAGC | + |
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Preference number: 4 (lower is better) Translates to: GVAQEHHKPVTFSPRRVNEAIVE*HRNTTS Trigger: GCTTGTGGTGTTCCTGTGCCACTCCACAATGGCCTC...ATTGACTCTCCTGGGGCTGAATGTGACAGGCTTGTGGTGTTCCTGTGCCACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| CDS-3UTR GCA 90 bp | GAGGCCATTGTGGAGTGGCACAGGAACACCACAAGCCTGTCACATTCAGCCCCACAGGAGAGTCAATGCTaGTGGAAAAGCTTGGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: EAIVEWHRNTTSLSHSAPQESQC*WKSLAE Trigger: CTCTGCCAAGCTTTTCCAGCAGCATTGACTCTCCTG...TGGGGCTGAATGTGACAGGCTTGTGGTGTTCCTGTGCCACTCCACAATGGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| CDS-3UTR GCA 90 bp | GGAACACCACAAGCCTGTCACATTCAGCCCCAGGAGAGTCAATGCTGCTGGAAACCCCAGGAGAGTCAATaGTGCTGGAAAAGCTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: GTPQACHIQPQESQCCWKPQESQ*CWKSLA Trigger: TGCCAAGCTTTTCCAGCAGCATTGACTCTCCTGGGG...TTTCCAGCAGCATTGACTCTCCTGGGGCTGAATGTGACAGGCTTGTGGTGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| CDS-3UTR CCA 90 bp | AGGAACACCACAAGCCTGTCACATTCAGCCCCAGGAGAGTCAATGCTGCTGGAAAAAAGCTTGGCAGAGTaGGAAGCCAAGGAGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: RNTTSLSHSAPGESMLLEKSLAE*EAKEPG Trigger: TCCTGGCTCCTTGGCTTCCCACTCTGCCAAGCTTTT...TTCCAGCAGCATTGACTCTCCTGGGGCTGAATGTGACAGGCTTGTGGTGTTCCT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| CDS GCA 90 bp | AGGACAAGGCTGGCGGGTCAGACCCCTGCGTGGTCACCCAGGGGCTaGCAGGACTCACCCTCCACTGCCTTGGCGCAGCAGAGCCCTGGT | + |
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Preference number: 5 (lower is better) Translates to: RTRLAGQTPAWSPRG*QDSPSTALAQQSPG Trigger: ACCAGGGCTCTGCTGCGCCAAGGCAGTGGAGGGTGAGTCCTGGCAGCCCCTGGGTGACCACGCAGGGGTCTGACCCGCCAGCCTTGTCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000547892.1 ENST00000549533.1 ENST00000551749.5 ENST00000552347.5 ENST00000552705.5 |
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| CDS TCA 90 bp | ACAGGGATCTGGCGCCCAGCTTCTGGCCTCCCAGATCCAGGAGGGTaGAGGCTGCCAGTAGCCACACAGCTCAGTCCAAACCCGTCGACC | + |
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Preference number: 5 (lower is better) Translates to: TGIWRPASGLPDPGG*RLPVATQLSPNPST Trigger: GGTCGACGGGTTTGGACTGAGCTGTGTGGCTACTGGCAGCCTTCACCCTCCTGGATCTGGGAGGCCAGAAGCTGGGCGCCAGATCCCTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000547892.1 ENST00000549533.1 |
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| CDS TCA 90 bp | CCACTCAGACAGGCAGGATGCTTGCCTCACCAGCGGTGGCAAGACTaGGGATGGACCAGCACAGCACAGCACAGCACAGCACAGCACAGC | + |
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Preference number: 5 (lower is better) Translates to: PLRQAGCLPHQRWQD*GWTSTAQHSTAQHS Trigger: GCTGTGCTGTGCTGTGCTGTGCTGTGCTGTGCTGGTCCATCCTCAGTCTTGCCACCGCTGGTGAGGCAAGCATCCTGCCTGTCTGAGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000547892.1 ENST00000551749.5 ENST00000552347.5 ENST00000552705.5 ENST00000552851.1 |
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| CDS TCA 90 bp | CCAACAGTCCAAGCTCTACGCTCGCGACTGGCTGAGACAAACCCTTaGTGCCCTGGTTGCTCCCAGAGCTCCAAGTCCTGCCTCCCTTCC | + |
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Preference number: 5 (lower is better) Translates to: PTVQALRSRLAETNP*CPGCSQSSKSCLPS Trigger: GGAAGGGAGGCAGGACTTGGAGCTCTGGGAGCAACCAGGGCATCAAGGGTTTGTCTCAGCCAGTCGCGAGCGTAGAGCTTGGACTGTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000547892.1 ENST00000550671.1 ENST00000551749.5 ENST00000552347.5 |
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| CDS TCA 90 bp | AGCACAGCACAGCACAGCACAGCACAGCACAGTACAGCAAGGGTCTaGTGGGTCTGCCCAGCCCCCGCCAGCTCACCTTCAGTTTGGGTA | + |
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Preference number: 5 (lower is better) Translates to: STAQHSTAQHSTARV*WVCPAPASSPSVWV Trigger: TACCCAAACTGAAGGTGAGCTGGCGGGGGCTGGGCAGACCCATCAGACCCTTGCTGTACTGTGCTGTGCTGTGCTGTGCTGTGCTGTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000547892.1 ENST00000551749.5 ENST00000552347.5 ENST00000552705.5 ENST00000552851.1 |
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| CDS CCA 90 bp | GACCCTGGAACAGAACCAGAGACCCGAGACTGCTCTGCAGGCCCCTaGGAGGAGCTTGGTGCCAGCACTAGAATGGAGGATCTGCAAGTC | + |
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Preference number: 5 (lower is better) Translates to: DPGTEPETRDCSAGP*EELGASTRMEDLQV Trigger: GACTTGCAGATCCTCCATTCTAGTGCTGGCACCAAGCTCCTCCCAGGGGCCTGCAGAGCAGTCTCGGGTCTCTGGTTCTGTTCCAGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000547892.1 ENST00000550671.1 |
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| CDS GCA 90 bp | ACGACCCACACCAATCCTCAAAGCCACTCAGACAGGCAGGATGCTTaGCTCACCAGCGGTGGCAAGACTGAGGATGGACCAGCACAGCAC | + |
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Preference number: 5 (lower is better) Translates to: TTHTNPQSHSDRQDA*LTSGGKTEDGPAQH Trigger: GTGCTGTGCTGGTCCATCCTCAGTCTTGCCACCGCTGGTGAGGCAAGCATCCTGCCTGTCTGAGTGGCTTTGAGGATTGGTGTGGGTCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000547892.1 ENST00000551749.5 ENST00000552347.5 ENST00000552705.5 ENST00000552851.1 |
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| CDS CCA 90 bp | GCCAGAAACCTGTATAACTGGAGGGACGGGAAGACAGTGAGAAGCTaGGACAGCCTGCTCCCCCGCAGCCTTCCAGTGAAGGGGCAAACA | + |
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Preference number: 5 (lower is better) Translates to: ARNLYNWRDGKTVRS*DSLLPRSLPVKGQT Trigger: TGTTTGCCCCTTCACTGGAAGGCTGCGGGGGAGCAGGCTGTCCCAGCTTCTCACTGTCTTCCCGTCCCTCCAGTTATACAGGTTTCTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000547892.1 ENST00000550671.1 |
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| CDS-3UTR CAA 90 bp | GGAGAGTCAATGCTGCTGGAAAAGCTTGGCAGAGTGGGAAGCCAAGGAGCCAGGGGGCCTGATACTCACTaGGTGTGGCTGTGCGGGGTT | + |
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Preference number: 5 (lower is better) Translates to: GESMLLEKLGRVGSQGARGPDTH*VWLCGV Trigger: AACCCCGCACAGCCACACCAAGTGAGTATCAGGCCC...CCTGGCTCCTTGGCTTCCCACTCTGCCAAGCTTTTCCAGCAGCATTGACTCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| CDS-3UTR CAA 90 bp | GGAAAAGCAGGCAGGATGAGGCAGCTGAGAGTTCCAGAAGGCCTGGGGCTGGCTCAGCTCCAAGCAGTGTaGAAGGGAAAAGCAGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: GKAGRMRQLRVPEGLGLAQLQAV*KGKAGR Trigger: CCTGCCTGCTTTTCCCTTCAACACTGCTTGGAGCTG...AGCCAGCCCCAGGCCTTCTGGAACTCTCAGCTGCCTCATCCTGCCTGCTTTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| CDS TCA 90 bp | CACTCAGTTCCAACCAACAGTCCAAGCTCTACGCTCGCGACTGGCTaGGACAAACCCTTGATGCCCTGGTTGCTCCCAGAGCTCCAAGTC | + |
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Preference number: 5 (lower is better) Translates to: HSVPTNSPSSTLATG*DKPLMPWLLPELQV Trigger: GACTTGGAGCTCTGGGAGCAACCAGGGCATCAAGGGTTTGTCTCAGCCAGTCGCGAGCGTAGAGCTTGGACTGTTGGTTGGAACTGAGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000547892.1 ENST00000551749.5 ENST00000552347.5 |
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| CDS GCA 90 bp | AATACAAATGCAGGAGACCCTGGAACAGAACCAGAGACCCGAGACTaGTCTGCAGGCCCCTGGGAGGAGCTTGGTGCCAGCACTAGAATG | + |
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Preference number: 5 (lower is better) Translates to: NTNAGDPGTEPETRD*SAGPWEELGASTRM Trigger: CATTCTAGTGCTGGCACCAAGCTCCTCCCAGGGGCCTGCAGAGCAGTCTCGGGTCTCTGGTTCTGTTCCAGGGTCTCCTGCATTTGTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000547892.1 ENST00000550671.1 |
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| CDS CCA 90 bp | ATCTTTATCCCTTTCCCCCAACCCACCGACCTAGAGGGAGAAAGCTaGCCCAGGTCCTTCCTGGCCAAGGACCTAGAAAATCCTGGCTCC | + |
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Preference number: 5 (lower is better) Translates to: IFIPFPQPTDLEGES*PRSFLAKDLENPGS Trigger: GGAGCCAGGATTTTCTAGGTCCTTGGCCAGGAAGGACCTGGGCCAGCTTTCTCCCTCTAGGTCGGTGGGTTGGGGGAAAGGGATAAAGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000547892.1 ENST00000550671.1 |
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| CDS CCA 90 bp | TGGACACTCAGTTCCAACCAACAGTCCAAGCTCTACGCTCGCGACTaGCTGAGACAAACCCTTGATGCCCTGGTTGCTCCCAGAGCTCCA | + |
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Preference number: 5 (lower is better) Translates to: WTLSSNQQSKLYARD*LRQTLDALVAPRAP Trigger: TGGAGCTCTGGGAGCAACCAGGGCATCAAGGGTTTGTCTCAGCCAGTCGCGAGCGTAGAGCTTGGACTGTTGGTTGGAACTGAGTGTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000547892.1 ENST00000551749.5 ENST00000552347.5 |
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| CDS GCA 90 bp | GACACCTCCACCTCACAAAGAGAAGGAGAGGAGGACCAGGAGACTTaGCCACTGCCCATGGACACTCAGTTCCAACCAACAGTCCAAGCT | + |
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Preference number: 5 (lower is better) Translates to: DTSTSQREGEEDQET*PLPMDTQFQPTVQA Trigger: AGCTTGGACTGTTGGTTGGAACTGAGTGTCCATGGGCAGTGGGCAAGTCTCCTGGTCCTCCTCTCCTTCTCTTTGTGAGGTGGAGGTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000547892.1 ENST00000551749.5 ENST00000552347.5 |
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| CDS CCA 90 bp | AGAAAGCTGGCCCAGGTCCTTCCTGGCCAAGGACCTAGAAAATCCTaGCTCCACTCCCGAGCTGTACACAGCCTAGAGGCTGAAAATACA | + |
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Preference number: 5 (lower is better) Translates to: RKLAQVLPGQGPRKS*LHSRAVHSLEAENT Trigger: TGTATTTTCAGCCTCTAGGCTGTGTACAGCTCGGGAGTGGAGCCAGGATTTTCTAGGTCCTTGGCCAGGAAGGACCTGGGCCAGCTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000547892.1 ENST00000550671.1 |
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| CDS CCA 90 bp | CAGAGCCCTGGTAACCAACACTATCGTTTACTACCCGGAGCACCCTaGGCTGACAGCAGCAGTTCTCAACACTTCCGGAACTTTCACCAC | + |
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Preference number: 5 (lower is better) Translates to: QSPGNQHYRLLPGAP*ADSSSSQHFRNFHH Trigger: GTGGTGAAAGTTCCGGAAGTGTTGAGAACTGCTGCTGTCAGCCCAGGGTGCTCCGGGTAGTAAACGATAGTGTTGGTTACCAGGGCTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000547892.1 ENST00000549533.1 ENST00000551749.5 ENST00000552347.5 ENST00000552705.5 ENST00000552851.1 |
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| CDS-3UTR CAA 90 bp | CTCTTAAAGGAGGCCATTGTGGAGTGGCACAGGAACACCACAAGCCTGTCACATTGCTGCTGGAAAAGCTaGGCAGAGTGGGAAGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: LLKEAIVEWHRNTTSLSHCCWKS*AEWEAK Trigger: CTTGGCTTCCCACTCTGCCAAGCTTTTCCAGCAGCA...ATGTGACAGGCTTGTGGTGTTCCTGTGCCACTCCACAATGGCCTCCTTTAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000549273.5 |
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| CDS TCA 90 bp | TATTACTTATTTCTGAAACTGAGAGCTGGGACACAAGCCCAGGTCTaGACACACCAGCTCAAATCCCAGGCCCACCACCAGGAGACCTGT | + |
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Preference number: 5 (lower is better) Translates to: YYLFLKLRAGTQAQV*THQLKSQAHHQETC Trigger: ACAGGTCTCCTGGTGGTGGGCCTGGGATTTGAGCTGGTGTGTTCAGACCTGGGCTTGTGTCCCAGCTCTCAGTTTCAGAAATAAGTAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547892.1 |
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| CDS CCA 90 bp | ACCCCCAACCATAGCCAATTATTACTTATTTCTGAAACTGAGAGCTaGGACACAAGCCCAGGTCTGAACACACCAGCTCAAATCCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: TPNHSQLLLISETES*DTSPGLNTPAQIPG Trigger: GCCTGGGATTTGAGCTGGTGTGTTCAGACCTGGGCTTGTGTCCCAGCTCTCAGTTTCAGAAATAAGTAATAATTGGCTATGGTTGGGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000547892.1 |
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| CDS CCA 90 bp | TGTTATGGCGGATGTCCACTCCCTGTGGGGGTGAAGAGGCAACCATaGACCCAATTACCCCCAACCATAGCCAATTATTACTTATTTCTG | + |
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Preference number: 5 (lower is better) Translates to: CYGGCPLPVGVKRQP*TQLPPTIANYYLFL Trigger: CAGAAATAAGTAATAATTGGCTATGGTTGGGGGTAATTGGGTCCATGGTTGCCTCTTCACCCCCACAGGGAGTGGACATCCGCCATAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000547892.1 |
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| CDS TCA 90 bp | CCGCCCTGCTGCCTTTCTGAGCAACTTAAGTTTTTCAGACTGTGTTaGCAATTACAAGAACTATTTAATAGCTCCACTTATGCAGCACTT | + |
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Preference number: 5 (lower is better) Translates to: PPCCLSEQLKFFRLC*QLQELFNSSTYAAL Trigger: AAGTGCTGCATAAGTGGAGCTATTAAATAGTTCTTGTAATTGTCAACACAGTCTGAAAAACTTAAGTTGCTCAGAAAGGCAGCAGGGCGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000547892.1 |
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| CDS GCA 72 bp | CTGGCGGGTCAGACCCCTGCGTGGTCACCCAGGGGCTaGCAGGACTCACCCTCCACTGCCTTGGCGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: LAGQTPAWSPRG*QDSPSTALAQQ Trigger: CTGCTGCGCCAAGGCAGTGGAGGGTGAGTCCTGGCAGCCCCTGGGTGACCACGCAGGGGTCTGACCCGCCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000547892.1 ENST00000549533.1 ENST00000551749.5 ENST00000552347.5 ENST00000552705.5 |
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| CDS CCA 72 bp | ACGCGCAGTGCACATACCTGGTGGAGAGGACAAGGCTaGCGGGTCAGACCCCTGCGTGGTCACCCAGGGGCT | + |
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Preference number: 6 (lower is better) Translates to: TRSAHTWWRGQG*RVRPLRGHPGA Trigger: AGCCCCTGGGTGACCACGCAGGGGTCTGACCCGCCAGCCTTGTCCTCTCCACCAGGTATGTGCACTGCGCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000547892.1 ENST00000549533.1 ENST00000551749.5 ENST00000552347.5 ENST00000552705.5 |
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| CDS GCA 72 bp | GCAGGAGACCCTGGAACAGAACCAGAGACCCGAGACTaGTCTGCAGGCCCCTGGGAGGAGCTTGGTGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: AGDPGTEPETRD*SAGPWEELGAS Trigger: GCTGGCACCAAGCTCCTCCCAGGGGCCTGCAGAGCAGTCTCGGGTCTCTGGTTCTGTTCCAGGGTCTCCTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000547892.1 ENST00000550671.1 |
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| CDS CCA 72 bp | AGGGAAGGGGAAGGAGAACCGGGTGAGACAGGGATCTaGCGCCCAGCTTCTGGCCTCCCAGATCCAGGAGGG | + |
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Preference number: 6 (lower is better) Translates to: REGEGEPGETGI*RPASGLPDPGG Trigger: CCCTCCTGGATCTGGGAGGCCAGAAGCTGGGCGCCAGATCCCTGTCTCACCCGGTTCTCCTTCCCCTTCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000547892.1 ENST00000549533.1 |
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| CDS GCA 72 bp | CAGACAGACAAGACCCAGCGGCTCCCAGGTCTACCGTaGTCTCTGGACCAGCCACTCACCATCCGGGAAAGG | + |
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Preference number: 6 (lower is better) Translates to: QTDKTQRLPGLP*SLDQPLTIRER Trigger: CCTTTCCCGGATGGTGAGTGGCTGGTCCAGAGAGCACGGTAGACCTGGGAGCCGCTGGGTCTTGTCTGTCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000547892.1 ENST00000550671.1 ENST00000551749.5 ENST00000552347.5 |
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| CDS CAA 90 bp | CAGAACCAGAGACCCGAGACTGCTCTGCAGGCCCCTGGGAGGAGCTaGGTGCCAGCACTAGAATGGAGGATCTGCAAGTCAGACCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: QNQRPETALQAPGRS*VPALEWRICKSDLG Trigger: CCCCAGGTCTGACTTGCAGATCCTCCATTCTAGTGCTGGCACCAAGCTCCTCCCAGGGGCCTGCAGAGCAGTCTCGGGTCTCTGGTTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000547892.1 ENST00000550671.1 |
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| CDS TCA 72 bp | CAAGCTCTACGCTCGCGACTGGCTGAGACAAACCCTTaGTGCCCTGGTTGCTCCCAGAGCTCCAAGTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: QALRSRLAETNP*CPGCSQSSKSC Trigger: GCAGGACTTGGAGCTCTGGGAGCAACCAGGGCATCAAGGGTTTGTCTCAGCCAGTCGCGAGCGTAGAGCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000547892.1 ENST00000550671.1 ENST00000551749.5 ENST00000552347.5 |
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| CDS CCA 72 bp | CTGTATAACTGGAGGGACGGGAAGACAGTGAGAAGCTaGGACAGCCTGCTCCCCCGCAGCCTTCCAGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: LYNWRDGKTVRS*DSLLPRSLPVK Trigger: CTTCACTGGAAGGCTGCGGGGGAGCAGGCTGTCCCAGCTTCTCACTGTCTTCCCGTCCCTCCAGTTATACAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000547892.1 ENST00000550671.1 |
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| CDS CAA 90 bp | AGGATGTACGTCGTAAGTTGTTCTGGTGTTTACATTCAGCCCCGCTaGAGGCATCCCCAGGCCAGGGCAGCTGTGCCCTCTAACGGGACC | + |
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Preference number: 6 (lower is better) Translates to: RMYVVSCSGVYIQPR*RHPQARAAVPSNGT Trigger: GGTCCCGTTAGAGGGCACAGCTGCCCTGGCCTGGGGATGCCTCAAGCGGGGCTGAATGTAAACACCAGAACAACTTACGACGTACATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000547892.1 ENST00000551749.5 ENST00000552347.5 |
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| CDS TCA 72 bp | CCAACCAACAGTCCAAGCTCTACGCTCGCGACTGGCTaGGACAAACCCTTGATGCCCTGGTTGCTCCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: PTNSPSSTLATG*DKPLMPWLLPE Trigger: CTCTGGGAGCAACCAGGGCATCAAGGGTTTGTCTCAGCCAGTCGCGAGCGTAGAGCTTGGACTGTTGGTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000547892.1 ENST00000550671.1 ENST00000551749.5 ENST00000552347.5 |
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| CDS CCA 72 bp | CAAGGTGGGAAGGGGCCTGAGACTCAGAGACCTGCCTaGTCCCCAAATCCAGTTATTCGGCTCTCGATCCTC | + |
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Preference number: 6 (lower is better) Translates to: QGGKGPETQRPA*SPNPVIRLSIL Trigger: GAGGATCGAGAGCCGAATAACTGGATTTGGGGACCAGGCAGGTCTCTGAGTCTCAGGCCCCTTCCCACCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000547892.1 ENST00000550973.5 |
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| CDS TCA 72 bp | GTCCTTGTTATGGCGGATGTCCACTCCCTGTGGGGGTaGAGAGGCAACCATGGACCCAATTACCCCCAACCA | + |
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Preference number: 6 (lower is better) Translates to: VLVMADVHSLWG*RGNHGPNYPQP Trigger: TGGTTGGGGGTAATTGGGTCCATGGTTGCCTCTTCACCCCCACAGGGAGTGGACATCCGCCATAACAAGGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000547892.1 |
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| CDS GCA 72 bp | ACAAGCGTGAGCCGCCTCGCCAGGCTCCTACCGCCCTaGTGCCTTTCTGAGCAACTTAAGTTTTTCAGACTG | + |
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Preference number: 6 (lower is better) Translates to: TSVSRLARLLPP*CLSEQLKFFRL Trigger: CAGTCTGAAAAACTTAAGTTGCTCAGAAAGGCAGCAGGGCGGTAGGAGCCTGGCGAGGCGGCTCACGCTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000547892.1 |
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| CDS GCA 72 bp | ACCAATCCTCAAAGCCACTCAGACAGGCAGGATGCTTaGCTCACCAGCGGTGGCAAGACTGAGGATGGACCA | + |
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Preference number: 6 (lower is better) Translates to: TNPQSHSDRQDA*LTSGGKTEDGP Trigger: TGGTCCATCCTCAGTCTTGCCACCGCTGGTGAGGCAAGCATCCTGCCTGTCTGAGTGGCTTTGAGGATTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000547892.1 ENST00000551749.5 ENST00000552347.5 ENST00000552705.5 ENST00000552851.1 |
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| CDS GCA 72 bp | AGAAGAAGCTTGCCCAGGGGACCCCACCATCAACCATaGCAGAGACGACCCACACCAATCCTCAAAGCCACT | + |
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Preference number: 6 (lower is better) Translates to: RRSLPRGPHHQP*QRRPTPILKAT Trigger: AGTGGCTTTGAGGATTGGTGTGGGTCGTCTCTGGCATGGTTGATGGTGGGGTCCCCTGGGCAAGCTTCTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000547892.1 ENST00000551749.5 ENST00000552347.5 ENST00000552705.5 ENST00000552851.1 |
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| CDS CCA 72 bp | AGTTCCAACCAACAGTCCAAGCTCTACGCTCGCGACTaGCTGAGACAAACCCTTGATGCCCTGGTTGCTCCC | + |
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Preference number: 6 (lower is better) Translates to: SSNQQSKLYARD*LRQTLDALVAP Trigger: GGGAGCAACCAGGGCATCAAGGGTTTGTCTCAGCCAGTCGCGAGCGTAGAGCTTGGACTGTTGGTTGGAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000547892.1 ENST00000550671.1 ENST00000551749.5 ENST00000552347.5 |
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| CDS TCA 72 bp | CTGGCTCCACTCCCGAGCTGTACACAGCCTAGAGGCTaGAAATACAAATGCAGGAGACCCTGGAACAGAACC | + |
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Preference number: 6 (lower is better) Translates to: LAPLPSCTQPRG*KYKCRRPWNRT Trigger: GGTTCTGTTCCAGGGTCTCCTGCATTTGTATTTTCAGCCTCTAGGCTGTGTACAGCTCGGGAGTGGAGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000547892.1 ENST00000550671.1 |
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| CDS CCA 72 bp | GGTAACCAACACTATCGTTTACTACCCGGAGCACCCTaGGCTGACAGCAGCAGTTCTCAACACTTCCGGAAC | + |
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Preference number: 6 (lower is better) Translates to: GNQHYRLLPGAP*ADSSSSQHFRN Trigger: GTTCCGGAAGTGTTGAGAACTGCTGCTGTCAGCCCAGGGTGCTCCGGGTAGTAAACGATAGTGTTGGTTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000547892.1 ENST00000549533.1 ENST00000551749.5 ENST00000552347.5 ENST00000552705.5 ENST00000552851.1 |
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| CDS TCA 72 bp | CCAACACTATCGTTTACTACCCGGAGCACCCTGGGCTaGCAGCAGCAGTTCTCAACACTTCCGGAACTTTCA | + |
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Preference number: 6 (lower is better) Translates to: PTLSFTTRSTLG*QQQFSTLPELS Trigger: TGAAAGTTCCGGAAGTGTTGAGAACTGCTGCTGTCAGCCCAGGGTGCTCCGGGTAGTAAACGATAGTGTTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000547892.1 ENST00000549533.1 ENST00000551749.5 ENST00000552347.5 ENST00000552705.5 ENST00000552851.1 |
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| CDS CCA 72 bp | GGATGTCCACTCCCTGTGGGGGTGAAGAGGCAACCATaGACCCAATTACCCCCAACCATAGCCAATTATTAC | + |
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Preference number: 6 (lower is better) Translates to: GCPLPVGVKRQP*TQLPPTIANYY Trigger: GTAATAATTGGCTATGGTTGGGGGTAATTGGGTCCATGGTTGCCTCTTCACCCCCACAGGGAGTGGACATCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000547892.1 |
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| CDS TCA 72 bp | CTCCTGTGTGCAAAACCCCGTGATGAGCATCTCCTGTaGATTATTTCTTCCCAAATTCACAAACTTGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: LLCAKPRDEHLL*IISSQIHKLVR Trigger: TCTGACAAGTTTGTGAATTTGGGAAGAAATAATTCACAGGAGATGCTCATCACGGGGTTTTGCACACAGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000550973.5 |
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| CDS TCA 72 bp | TTACTGTGTGCAAAACCCCGTGATGAGCATCTCCTGTaGATTATTTCTTCCCAAATTCACAAACTTGTCAGA | + |
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Preference number: 6 (lower is better) Translates to: LLCAKPRDEHLL*IISSQIHKLVR Trigger: TCTGACAAGTTTGTGAATTTGGGAAGAAATAATTCACAGGAGATGCTCATCACGGGGTTTTGCACACAGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547892.1 |
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