RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RPL14 (Homo sapiens)

Ensembl gene IDs: ENSG00000188846

Ensembl transcript IDs: ENST00000338970.10, ENST00000396203.7, ENST00000416518.1, ENST00000435633.5, ENST00000465280.1, ENST00000465325.1

Found 365 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTGAGGCAGGAGAATGGCATGAACCCGGGAGGTGGAACTTACAGTaGGCCGAGATAGCGCCACTGCAGTCCGGCCTGAGCAACAGAACG +
Preference number: 1 (lower is better)
Translates to: AEAGEWHEPGRWNLQ*AEIAPLQSGLSNRT
Trigger: CGTTCTGTTGCTCAGGCCGGACTGCAGTGGCGCTATCTCGGCTCACTGTAAGTTCCACCTCCCGGGTTCATGCCATTCTCCTGCCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR TCA 90 bp CTTACACCACTGGCCCTTCCAGTTCTCAGGCCTCTGGACCCAGTTTaGATTATCCCAATCAGCTTTCCTGGTTCTCCAGCTTGCAGATGG +
Preference number: 1 (lower is better)
Translates to: LTPLALPVLRPLDPV*IIPISFPGSPACRW
Trigger: CCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGGGATAATTCAAACTGGGTCCAGAGGCCTGAGAACTGGAAGGGCCAGTGGTGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR TCA 90 bp GAAACCCATCCTCTCCTGCCCTCGGTTGTTGATGCTCTTGATTCTTaGTCAAGCCTTTGGTCTCAGACCAGGACTTACACCACTGGCCCT +
Preference number: 1 (lower is better)
Translates to: ETHPLLPSVVDALDS*SSLWSQTRTYTTGP
Trigger: AGGGCCAGTGGTGTAAGTCCTGGTCTGAGACCAAAGGCTTGATCAAGAATCAAGAGCATCAACAACCGAGGGCAGGAGAGGATGGGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR GCA 90 bp GGGAGTGGATCACGAGGTCAGGATCACTCAGTCTACCCATTCAAATaGCCATCCACCATCCTGGCTAACAGGGTGAAACCCTGTATCTAC +
Preference number: 1 (lower is better)
Translates to: GSGSRGQDHSVYPFK*PSTILANRVKPCIY
Trigger: GTAGATACAGGGTTTCACCCTGTTAGCCAGGATGGTGGATGGGCATTTGAATGGGTAGACTGAGTGATCCTGACCTCGTGATCCACTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR CCA 90 bp TCAGACCAGGACTTACACCACTGGCCCTTCCAGTTCTCAGGCCTCTaGACCCAGTTTGAATTATCCCAATCAGCTTTCCTGGTTCTCCAG +
Preference number: 1 (lower is better)
Translates to: SDQDLHHWPFQFSGL*TQFELSQSAFLVLQ
Trigger: CTGGAGAACCAGGAAAGCTGATTGGGATAATTCAAACTGGGTCCAGAGGCCTGAGAACTGGAAGGGCCAGTGGTGTAAGTCCTGGTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR TCA 90 bp ACCTCATGGACTGTAGCCAAAGGGCTCTCAAAGCCACAGGCAGTCTaGCAAAAGTGCTCTCCCCTTTCCTCCATAAGGAATTACAACCTG +
Preference number: 1 (lower is better)
Translates to: TSWTVAKGLSKPQAV*QKCSPLSSIRNYNL
Trigger: CAGGTTGTAATTCCTTATGGAGGAAAGGGGAGAGCACTTTTGTCAGACTGCCTGTGGCTTTGAGAGCCCTTTGGCTACAGTCCATGAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR TCA 90 bp GCTTCCCGTGTTCCCCTACACGATCTAACCACTAACCTACTTCCTTaGTGTGGTCCCGAGCCAGTCCTCTACACTATCAGTTCGTTTATT +
Preference number: 1 (lower is better)
Translates to: ASRVPLHDLTTNLLP*CGPEPVLYTISSFI
Trigger: AATAAACGAACTGATAGTGTAGAGGACTGGCTCGGGACCACATCAAGGAAGTAGGTTAGTGGTTAGATCGTGTAGGGGAACACGGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR TCA 90 bp CAGTCTACCCATTCAAATGCCCATCCACCATCCTGGCTAACAGGGTaGAACCCTGTATCTACTAACAATACAAACATTAGCCAGGTGTGG +
Preference number: 1 (lower is better)
Translates to: QSTHSNAHPPSWLTG*NPVSTNNTNISQVW
Trigger: CCACACCTGGCTAATGTTTGTATTGTTAGTAGATACAGGGTTTCACCCTGTTAGCCAGGATGGTGGATGGGCATTTGAATGGGTAGACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR CCA 90 bp TCTCAGGCCTCTGGACCCAGTTTGAATTATCCCAATCAGCTTTCCTaGTTCTCCAGCTTGCAGATGGTATTTTGTGGGACTTCTTGGTTT +
Preference number: 1 (lower is better)
Translates to: SQASGPSLNYPNQLS*FSSLQMVFCGTSWF
Trigger: AAACCAAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGGGATAATTCAAACTGGGTCCAGAGGCCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR TCA 90 bp AACCCTGACACATTGTTTTCTCCCTTATTTCTGCAGTCCAATGCATaGTCAAGACCACCTAAATGGCATTACCACTGTCACTTCCTTGGA +
Preference number: 1 (lower is better)
Translates to: NPDTLFSPLFLQSNA*SRPPKWHYHCHFLG
Trigger: TCCAAGGAAGTGACAGTGGTAATGCCATTTAGGTGGTCTTGATCATGCATTGGACTGCAGAAATAAGGGAGAAAACAATGTGTCAGGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR TCA 90 bp GAAGGGCTAAGTTTCTCTCCTATTAGCTCCTTTCCCAGAAGCATTTaGACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAA +
Preference number: 1 (lower is better)
Translates to: EGLSFSPISSFPRSI*TCPSLQIYKHKTSE
Trigger: TTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTCTGGGAAAGGAGCTAATAGGAGAGAAACTTAGCCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR CCA 90 bp ATGGTTATGTGTGCACTTGACTGGGCTAAGGATTGTTCAGCTAGCTaGCGAAACATTTCTAAATCTGTGAGATTACCTCTGGAAGAGATT +
Preference number: 1 (lower is better)
Translates to: MVMCALDWAKDCSAS*RNISKSVRLPLEEI
Trigger: AATCTCTTCCAGAGGTAATCTCACAGATTTAGAAATGTTTCGCCAGCTAGCTGAACAATCCTTAGCCCAGTCAAGTGCACACATAACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR TCA 90 bp CTTTCACAAGCATCTTATTTGACTCATTTGATCCTTGCCACAATATaGGGCAGGTATCAGGATCCTTGCTTTTTAGATGAGGTTCCCATA +
Preference number: 1 (lower is better)
Translates to: LSQASYLTHLILATI*GRYQDPCFLDEVPI
Trigger: TATGGGAACCTCATCTAAAAAGCAAGGATCCTGATACCTGCCTCATATTGTGGCAAGGATCAAATGAGTCAAATAAGATGCTTGTGAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR GCA 90 bp GATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTaGCTATACCGCCAGGTTAGTTCAACACAATTCAACCCAAATTAC +
Preference number: 1 (lower is better)
Translates to: DKRKSRLSENQTSKF*LYRQVSSTQFNPNY
Trigger: GTAATTTGGGTTGAATTGTGTTGAACTAACCTGGCGGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp CATCCTCTGAGCACCTCATGGACTGTAGCCAAAGGGCTCTCAAAGCCACAGGCAGAAGGTGGAGGGAGCTaGGATCGCACCACTGCACTC +
Preference number: 2 (lower is better)
Translates to: HPLSTSWTVAKGLSKPQAEGGGS*DRTTAL
Trigger: GAGTGCAGTGGTGCGATCTCAGCTCCCTCCACCTTC...TGCCTGTGGCTTTGAGAGCCCTTTGGCTACAGTCCATGAGGTGCTCAGAGGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CCA 90 bp CAGCCTGAAATCAGCATTCTTTTCGTATGCCATCCCCCGTCTCCAATGAGGGTGGCTGAGGCAGGAGAATaGCATGAACCCGGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: QPEISILFVCHPPSPMRVAEAGE*HEPGRW
Trigger: CCACCTCCCGGGTTCATGCCATTCTCCTGCCTCAGC...CACCCTCATTGGAGACGGGGGATGGCATACGAAAAGAATGCTGATTTCAGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp CAGCCTGAAATCAGCATTCTTTTCGTATGCCATCCCCCGTCTCCAATGAGGGTGGGCAGGAGAATGGCATaGACCCGGGAGGTGGAACTT +
Preference number: 2 (lower is better)
Translates to: QPEISILFVCHPPSPMRVGRRMA*TREVEL
Trigger: AAGTTCCACCTCCCGGGTTCATGCCATTCTCCTGCC...CACCCTCATTGGAGACGGGGGATGGCATACGAAAAGAATGCTGATTTCAGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp CAGCCTGAAATCAGCATTCTTTTCGTATGCCATCCCCCGTCTCCAATGAGGGTGGGCGGACAGATCACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: QPEISILFVCHPPSPMRVGGQIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTGATCTGTCCGCC...CACCCTCATTGGAGACGGGGGATGGCATACGAAAAGAATGCTGATTTCAGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp CATCCTCTGAGCACCTCATGGACTGTAGCCAAAGGGCTCTCAAAGCCACAGGCAACTAACCTACTTCCTTaGTGTGGTCCCGAGCCAGTC +
Preference number: 2 (lower is better)
Translates to: HPLSTSWTVAKGLSKPQATNLLP*CGPEPV
Trigger: GACTGGCTCGGGACCACATCAAGGAAGTAGGTTAGT...TGCCTGTGGCTTTGAGAGCCCTTTGGCTACAGTCCATGAGGTGCTCAGAGGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp CATCCTCTGAGCACCTCATGGACTGTAGCCAAAGGGCTCTCAAAGCCACAGGCAGCATGGCCAACATGGTaGAACCCCATCTCCACTAAA +
Preference number: 2 (lower is better)
Translates to: HPLSTSWTVAKGLSKPQAAWPTW*NPISTK
Trigger: TTTAGTGGAGATGGGGTTTCACCATGTTGGCCATGC...TGCCTGTGGCTTTGAGAGCCCTTTGGCTACAGTCCATGAGGTGCTCAGAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp CCAATCAGCTTTCCTGGTTCTCCAGCTTGCAGATGGTATTTTGTGGGACTTCTTGGCGGGTGTATCACCTaGGGTCAGGAGCTCGAGACC +
Preference number: 2 (lower is better)
Translates to: PISFPGSPACRWYFVGLLGGCIT*GQELET
Trigger: GGTCTCGAGCTCCTGACCTCAGGTGATACACCCGCC...AAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CCA 90 bp CATCCTCTGAGCACCTCATGGACTGTAGCCAAAGGGCTCTCAAAGCCACAGGCATTAACCCCTGCTACTTaGGAGGCTGAGGCAGAACAA +
Preference number: 2 (lower is better)
Translates to: HPLSTSWTVAKGLSKPQALTPAT*EAEAEQ
Trigger: TTGTTCTGCCTCAGCCTCCCAAGTAGCAGGGGTTAA...TGCCTGTGGCTTTGAGAGCCCTTTGGCTACAGTCCATGAGGTGCTCAGAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp TCGTCTCTTGATTGTTGTCATCCTACCCCTGGGGAATCAGTGACCACTTACATACACTGCAGTCCGGCCTaGGCAACAGAACGAGACTCC +
Preference number: 2 (lower is better)
Translates to: SSLDCCHPTPGESVTTYIHCSPA*ATERDS
Trigger: GGAGTCTCGTTCTGTTGCTCAGGCCGGACTGCAGTG...TATGTAAGTGGTCACTGATTCCCCAGGGGTAGGATGACAACAATCAAGAGACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp TCGTCTCTTGATTGTTGTCATCCTACCCCTGGGGAATCAGTGACCACTTACATAAGCAGGAGAACCGCTTaGGCCCAGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: SSLDCCHPTPGESVTTYISRRTA*AQEAEV
Trigger: AACCTCTGCCTCCTGGGCTCAAGCGGTTCTCCTGCT...TATGTAAGTGGTCACTGATTCCCCAGGGGTAGGATGACAACAATCAAGAGACGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR GCA 90 bp TCATGTTCCCTCACAACCAATGAACCAGAGGTACAAACCAGAAACCCTGACACACCAGGAGGCAGAGGTTaGGCTGAGCCAAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: SCSLTTNEPEVQTRNPDTPGGRG*AEPRSC
Trigger: GCACGATCTTGGCTCAGCGCAACCTCTGCCTCCTGG...TGTGTCAGGGTTTCTGGTTTGTACCTCTGGTTCATTGGTTGTGAGGGAACATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR CAA 90 bp ACTTACACCACTGGCCCTTCCAGTTCTCAGGCCTCTGGACCCAGTTaGAATTATCCCAATCAGCTTTCCTGGTTCTCCAGCTTGCAGATG +
Preference number: 2 (lower is better)
Translates to: TYTTGPSSSQASGPS*NYPNQLSWFSSLQM
Trigger: CATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGGGATAATTCAAACTGGGTCCAGAGGCCTGAGAACTGGAAGGGCCAGTGGTGTAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp CATCCTCTGAGCACCTCATGGACTGTAGCCAAAGGGCTCTCAAAGCCACAGGCAGTGAGATTAAAGAACTaGTTATTTAGGCCAGGCGCG +
Preference number: 2 (lower is better)
Translates to: HPLSTSWTVAKGLSKPQAVRLKN*LFRPGA
Trigger: CGCGCCTGGCCTAAATAATCAGTTCTTTAATCTCAC...TGCCTGTGGCTTTGAGAGCCCTTTGGCTACAGTCCATGAGGTGCTCAGAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp CCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGATACTAACCTACTTCCTTaGTGTGGTCCCGAGCCAGTC +
Preference number: 2 (lower is better)
Translates to: PWITAKLHTANPSIPSLDTNLLP*CGPEPV
Trigger: GACTGGCTCGGGACCACATCAAGGAAGTAGGTTAGT...ATCAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CCA 90 bp CATCCTCTGAGCACCTCATGGACTGTAGCCAAAGGGCTCTCAAAGCCACAGGCATCAAGACCACCTAAATaGCATTACCACTGTCACTTC +
Preference number: 2 (lower is better)
Translates to: HPLSTSWTVAKGLSKPQASRPPK*HYHCHF
Trigger: GAAGTGACAGTGGTAATGCCATTTAGGTGGTCTTGA...TGCCTGTGGCTTTGAGAGCCCTTTGGCTACAGTCCATGAGGTGCTCAGAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp CCAATCAGCTTTCCTGGTTCTCCAGCTTGCAGATGGTATTTTGTGGGACTTCTTAACTACTCAGAAGGCTaGGCAGGAGAACCGCTTGAG +
Preference number: 2 (lower is better)
Translates to: PISFPGSPACRWYFVGLLNYSEG*AGEPLE
Trigger: CTCAAGCGGTTCTCCTGCTCAGCCTTCTGAGTAGTT...AAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp TTCCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGGCATGGCCAACATGGTaGAACCCCATCTCCACTAAA +
Preference number: 2 (lower is better)
Translates to: FLGLLPNFILPTRAFPVLAWPTW*NPISTK
Trigger: TTTAGTGGAGATGGGGTTTCACCATGTTGGCCATGC...CAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp TCATGTTCCCTCACAACCAATGAACCAGAGGTACAAACCAGAAACCCTGACACACAAGACCAGTCTGGCTaGCATGGCAAAACCCCATCT +
Preference number: 2 (lower is better)
Translates to: SCSLTTNEPEVQTRNPDTQDQSG*HGKTPS
Trigger: AGATGGGGTTTTGCCATGTCAGCCAGACTGGTCTTG...TGTGTCAGGGTTTCTGGTTTGTACCTCTGGTTCATTGGTTGTGAGGGAACATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp CCAATCAGCTTTCCTGGTTCTCCAGCTTGCAGATGGTATTTTGTGGGACTTCTTCCACCGTGCCCAGCCTaGAATCAGCATTCTTTTCGT +
Preference number: 2 (lower is better)
Translates to: PISFPGSPACRWYFVGLLPPCPA*NQHSFR
Trigger: ACGAAAAGAATGCTGATTTCAGGCTGGGCACGGTGG...AAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR GCA 90 bp CAGCCTGAAATCAGCATTCTTTTCGTATGCCATCCCCCGTCTCCAATGAGGGTGATCCTACTATCAATCTaGCTCCTAACTCCAGCCTCA +
Preference number: 2 (lower is better)
Translates to: QPEISILFVCHPPSPMRVILLSI*LLTPAS
Trigger: TGAGGCTGGAGTTAGGAGGCAGATTGATAGTAGGAT...CACCCTCATTGGAGACGGGGGATGGCATACGAAAAGAATGCTGATTTCAGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR GCA 90 bp TCCTTTACCCCAGTGACGCCTGAAGCTAGCTTTTGGTTAGGAAACAAATTTATTCCAGGAGGCAGAGGTTaGGCTGAGCCAAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: SFTPVTPEASFWLGNKFIPGGRG*AEPRSC
Trigger: GCACGATCTTGGCTCAGCGCAACCTCTGCCTCCTGG...AATAAATTTGTTTCCTAACCAAAAGCTAGCTTCAGGCGTCACTGGGGTAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR GCA 90 bp CATCCTCTGAGCACCTCATGGACTGTAGCCAAAGGGCTCTCAAAGCCACAGGCATACAACCTGTATGTCTaGAAATCTACACTGCCTCAT +
Preference number: 2 (lower is better)
Translates to: HPLSTSWTVAKGLSKPQAYNLYV*KSTLPH
Trigger: ATGAGGCAGTGTAGATTTGCAGACATACAGGTTGTA...TGCCTGTGGCTTTGAGAGCCCTTTGGCTACAGTCCATGAGGTGCTCAGAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CCA 90 bp CCAATCAGCTTTCCTGGTTCTCCAGCTTGCAGATGGTATTTTGTGGGACTTCTTACTAGCCAGACGTGGTaGCACACACCTATAGTCCCA +
Preference number: 2 (lower is better)
Translates to: PISFPGSPACRWYFVGLLTSQTW*HTPIVP
Trigger: TGGGACTATAGGTGTGTGCCACCACGTCTGGCTAGT...AAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CCA 90 bp TTCCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGAGTTCAAGACCAGTCTaGCTGACATGGCAAAACCCC +
Preference number: 2 (lower is better)
Translates to: FLGLLPNFILPTRAFPVLSSRPV*LTWQNP
Trigger: GGGGTTTTGCCATGTCAGCCAGACTGGTCTTGAACT...CAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CCA 90 bp CCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGATAGTTCAAGACCAGTCTaGCTGACATGGCAAAACCCC +
Preference number: 2 (lower is better)
Translates to: PWITAKLHTANPSIPSLDSSRPV*LTWQNP
Trigger: GGGGTTTTGCCATGTCAGCCAGACTGGTCTTGAACT...ATCAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CCA 90 bp ATGACACTTTGGGGATGGGACCTAGGTCTATACAGGAAATTCATTTATGCTTCACTTGAACCCGGAAGGTaGAGGGAGCTGAGATCGCAC +
Preference number: 2 (lower is better)
Translates to: MTLWGWDLGLYRKFIYASLEPGR*RELRSH
Trigger: GTGCGATCTCAGCTCCCTCCACCTTCCGGGTTCAAG...TGAAGCATAAATGAATTTCCTGTATAGACCTAGGTCCCATCCCCAAAGTGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CCA 90 bp CAGCCTGAAATCAGCATTCTTTTCGTATGCCATCCCCCGTCTCCAATGAGGGTGATATACATGACACTTTaGGGATGGGACCTAGGTCTA +
Preference number: 2 (lower is better)
Translates to: QPEISILFVCHPPSPMRVIYMTL*GWDLGL
Trigger: TAGACCTAGGTCCCATCCCCAAAGTGTCATGTATAT...CACCCTCATTGGAGACGGGGGATGGCATACGAAAAGAATGCTGATTTCAGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR CAA 90 bp ATGCATGATCAAGACCACCTAAATGGCATTACCACTGTCACTTCCTaGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAG +
Preference number: 2 (lower is better)
Translates to: MHDQDHLNGITTVTS*DYCQTSYCQPEHSQ
Trigger: CTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGGAAGTGACAGTGGTAATGCCATTTAGGTGGTCTTGATCATGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp ACAAAAGTGCTCTCCCCTTTCCTCCATAAGGAATTACAACCTGTATGTCTGCAAAACTACTCAGAAGGCTaGGCAGGAGAACCGCTTGAG +
Preference number: 2 (lower is better)
Translates to: TKVLSPFLHKELQPVCLQNYSEG*AGEPLE
Trigger: CTCAAGCGGTTCTCCTGCTCAGCCTTCTGAGTAGTT...TTGCAGACATACAGGTTGTAATTCCTTATGGAGGAAAGGGGAGAGCACTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCGGCGGGTGTATCACCTaGGGTCAGGAGCTCGAGACC +
Preference number: 2 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTGGCIT*GQELET
Trigger: GGTCTCGAGCTCCTGACCTCAGGTGATACACCCGCC...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACCAAGACCAGTCTGGCTaGCATGGCAAAACCCCATCT +
Preference number: 2 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNQDQSG*HGKTPS
Trigger: AGATGGGGTTTTGCCATGTCAGCCAGACTGGTCTTG...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp TCGTCTCTTGATTGTTGTCATCCTACCCCTGGGGAATCAGTGACCACTTACATACTGCAGTCCAATGCATaGTCAAGACCACCTAAATGG +
Preference number: 2 (lower is better)
Translates to: SSLDCCHPTPGESVTTYILQSNA*SRPPKW
Trigger: CCATTTAGGTGGTCTTGATCATGCATTGGACTGCAG...TATGTAAGTGGTCACTGATTCCCCAGGGGTAGGATGACAACAATCAAGAGACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp CCAATCAGCTTTCCTGGTTCTCCAGCTTGCAGATGGTATTTTGTGGGACTTCTTTTTCCCAGAAGCATTTaGACATGCCCATCACTCCAG +
Preference number: 2 (lower is better)
Translates to: PISFPGSPACRWYFVGLLFPRSI*TCPSLQ
Trigger: CTGGAGTGATGGGCATGTTCAAATGCTTCTGGGAAA...AAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR GCA 90 bp CCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGATATCCTACTATCAATCTaGCTCCTAACTCCAGCCTCA +
Preference number: 2 (lower is better)
Translates to: PWITAKLHTANPSIPSLDILLSI*LLTPAS
Trigger: TGAGGCTGGAGTTAGGAGGCAGATTGATAGTAGGAT...ATCAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR GCA 90 bp CATCCTCTGAGCACCTCATGGACTGTAGCCAAAGGGCTCTCAAAGCCACAGGCATTACACCATACCACTTaGCTATTATCAAGCAAATCA +
Preference number: 2 (lower is better)
Translates to: HPLSTSWTVAKGLSKPQALHHTT*LLSSKS
Trigger: TGATTTGCTTGATAATAGGCAAGTGGTATGGTGTAA...TGCCTGTGGCTTTGAGAGCCCTTTGGCTACAGTCCATGAGGTGCTCAGAGGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR GCA 90 bp CCAATCAGCTTTCCTGGTTCTCCAGCTTGCAGATGGTATTTTGTGGGACTTCTTACCCAATCCACACTATaGTACCAGACTGACCTTCCT +
Preference number: 2 (lower is better)
Translates to: PISFPGSPACRWYFVGLLTQSTL*YQTDLP
Trigger: AGGAAGGTCAGTCTGGTAGCATAGTGTGGATTGGGT...AAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CCA 90 bp CCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGATTTTAAAATGTATTCCTaGCCAGAAGCGGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: PWITAKLHTANPSIPSLDFKMYS*PEAVAH
Trigger: GTGAGCCACCGCTTCTGGCCAGGAATACATTTTAAA...ATCAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CCA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACCCTACTTCCTTGATGTaGTCCCGAGCCAGTCCTCTA +
Preference number: 2 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNPTSLM*SRASPL
Trigger: TAGAGGACTGGCTCGGGACCACATCAAGGAAGTAGG...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCCACTGCAGTCCGGCCTaGGCAACAGAACGAGACTCC +
Preference number: 2 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTHCSPA*ATERDS
Trigger: GGAGTCTCGTTCTGTTGCTCAGGCCGGACTGCAGTG...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCAGCAGGAGAACCGCTTaGGCCCAGGAGGCAGAGGTT +
Preference number: 2 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTSRRTA*AQEAEV
Trigger: AACCTCTGCCTCCTGGGCTCAAGCGGTTCTCCTGCT...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR GCA 90 bp CAGCCTGAAATCAGCATTCTTTTCGTATGCCATCCCCCGTCTCCAATGAGGGTGTCAAGCAAATCAATGTaGTTTTTCCTTTACCCCAGT +
Preference number: 2 (lower is better)
Translates to: QPEISILFVCHPPSPMRVSSKSM*FFLYPS
Trigger: ACTGGGGTAAAGGAAAAAGCACATTGATTTGCTTGA...CACCCTCATTGGAGACGGGGGATGGCATACGAAAAGAATGCTGATTTCAGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CCA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCGCTGAGGCAGGAGAATaGCATGAACCCGGGAGGTGG +
Preference number: 2 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTAEAGE*HEPGRW
Trigger: CCACCTCCCGGGTTCATGCCATTCTCCTGCCTCAGC...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CCA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACCACTACATTCCAGCCTaGGCAAGAGTAAGGCTCTGT +
Preference number: 2 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNHYIPA*ARVRLC
Trigger: ACAGAGCCTTACTCTTGCCCAGGCTGGAATGTAGTG...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR CAA 90 bp GGACCCAGTTTGAATTATCCCAATCAGCTTTCCTGGTTCTCCAGCTaGCAGATGGTATTTTGTGGGACTTCTTGGTTTCCACAATCTCTT +
Preference number: 2 (lower is better)
Translates to: GPSLNYPNQLSWFSS*QMVFCGTSWFPQSL
Trigger: AAGAGATTGTGGAAACCAAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGGGATAATTCAAACTGGGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACAATCTGCTAGACTCTTaGGCATCAAGAGGCTGTCAC +
Preference number: 2 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNNLLDS*ASRGCH
Trigger: GTGACAGCCTCTTGATGCTCAAGAGTCTAGCAGATT...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCGGCGGACAGATCACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTGGQIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTGATCTGTCCGCC...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp ACAAAAGTGCTCTCCCCTTTCCTCCATAAGGAATTACAACCTGTATGTCTGCAACCTCTATTCGTCTCTTaGTTGTTGTCATCCTACCCC +
Preference number: 2 (lower is better)
Translates to: TKVLSPFLHKELQPVCLQPLFVS*LLSSYP
Trigger: GGGGTAGGATGACAACAATCAAGAGACGAATAGAGG...TTGCAGACATACAGGTTGTAATTCCTTATGGAGGAAAGGGGAGAGCACTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR GCA 90 bp CCAATCAGCTTTCCTGGTTCTCCAGCTTGCAGATGGTATTTTGTGGGACTTCTTGACTCATTTGATCCTTaGCACAATATGAGGCAGGTA +
Preference number: 2 (lower is better)
Translates to: PISFPGSPACRWYFVGLLDSFDP*HNMRQV
Trigger: TACCTGCCTCATATTGTGGCAAGGATCAAATGAGTC...AAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CCA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCCTTGAACCCGGAAGGTaGAGGGAGCTGAGATCGCAC +
Preference number: 2 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTLEPGR*RELRSH
Trigger: GTGCGATCTCAGCTCCCTCCACCTTCCGGGTTCAAG...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CCA 90 bp TCGTCTCTTGATTGTTGTCATCCTACCCCTGGGGAATCAGTGACCACTTACATATCAAGACCACCTAAATaGCATTACCACTGTCACTTC +
Preference number: 2 (lower is better)
Translates to: SSLDCCHPTPGESVTTYISRPPK*HYHCHF
Trigger: GAAGTGACAGTGGTAATGCCATTTAGGTGGTCTTGA...TATGTAAGTGGTCACTGATTCCCCAGGGGTAGGATGACAACAATCAAGAGACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp TCGTCTCTTGATTGTTGTCATCCTACCCCTGGGGAATCAGTGACCACTTACATACTGGACTACATATCATaGTTAACTACTCTGAAGCGT +
Preference number: 2 (lower is better)
Translates to: SSLDCCHPTPGESVTTYILDYIS*LTTLKR
Trigger: ACGCTTCAGAGTAGTTAATCATGATATGTAGTCCAG...TATGTAAGTGGTCACTGATTCCCCAGGGGTAGGATGACAACAATCAAGAGACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR GCA 90 bp TTCCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGGATGTTGGAGTTAAGTaGATATACATGACACTTTGG +
Preference number: 2 (lower is better)
Translates to: FLGLLPNFILPTRAFPVLDVGVK*IYMTLW
Trigger: CCAAAGTGTCATGTATATGCACTTAACTCCAACATC...CAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR GCA 90 bp CCAATCAGCTTTCCTGGTTCTCCAGCTTGCAGATGGTATTTTGTGGGACTTCTTTCCAGGATCTTTTACTaGCCCAAATTACCTGTATCT +
Preference number: 2 (lower is better)
Translates to: PISFPGSPACRWYFVGLLSRIFY*PKLPVS
Trigger: AGATACAGGTAATTTGGGGCAGTAAAAGATCCTGGA...AAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR GCA 90 bp CCAATCAGCTTTCCTGGTTCTCCAGCTTGCAGATGGTATTTTGTGGGACTTCTTATAACATTTCTCCTTTaGTTACTACCCTCTTCCCCT +
Preference number: 2 (lower is better)
Translates to: PISFPGSPACRWYFVGLLITFLL*LLPSSP
Trigger: AGGGGAAGAGGGTAGTAAGCAAAGGAGAAATGTTAT...AAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CCA 90 bp TCATGTTCCCTCACAACCAATGAACCAGAGGTACAAACCAGAAACCCTGACACACTACCTATCCAAGTATaGGCAGAGAGTGAGATTAAA +
Preference number: 2 (lower is better)
Translates to: SCSLTTNEPEVQTRNPDTLPIQV*AESEIK
Trigger: TTTAATCTCACTCTCTGCCCATACTTGGATAGGTAG...TGTGTCAGGGTTTCTGGTTTGTACCTCTGGTTCATTGGTTGTGAGGGAACATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CCA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACTTTAAAATGTATTCCTaGCCAGAAGCGGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNFKMYS*PEAVAH
Trigger: GTGAGCCACCGCTTCTGGCCAGGAATACATTTTAAA...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp ATGACACTTTGGGGATGGGACCTAGGTCTATACAGGAAATTCATTTATGCTTCAGTGAGATTAAAGAACTaGTTATTTAGGCCAGGCGCG +
Preference number: 2 (lower is better)
Translates to: MTLWGWDLGLYRKFIYASVRLKN*LFRPGA
Trigger: CGCGCCTGGCCTAAATAATCAGTTCTTTAATCTCAC...TGAAGCATAAATGAATTTCCTGTATAGACCTAGGTCCCATCCCCAAAGTGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACACAAACCAGAAACCCTaGCACATTGTTTTCTCCCTT +
Preference number: 2 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNTNQKP*HIVFSL
Trigger: AAGGGAGAAAACAATGTGTCAGGGTTTCTGGTTTGT...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR GCA 90 bp TCATGTTCCCTCACAACCAATGAACCAGAGGTACAAACCAGAAACCCTGACACATTTCTCCCTTATTTCTaGAGTCCAATGCATGATCAA +
Preference number: 2 (lower is better)
Translates to: SCSLTTNEPEVQTRNPDTFLPYF*SPMHDQ
Trigger: TTGATCATGCATTGGACTGCAGAAATAAGGGAGAAA...TGTGTCAGGGTTTCTGGTTTGTACCTCTGGTTCATTGGTTGTGAGGGAACATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CCA 90 bp ACAAAAGTGCTCTCCCCTTTCCTCCATAAGGAATTACAACCTGTATGTCTGCAAATATACATGACACTTTaGGGATGGGACCTAGGTCTA +
Preference number: 2 (lower is better)
Translates to: TKVLSPFLHKELQPVCLQIYMTL*GWDLGL
Trigger: TAGACCTAGGTCCCATCCCCAAAGTGTCATGTATAT...TTGCAGACATACAGGTTGTAATTCCTTATGGAGGAAAGGGGAGAGCACTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR CAA 90 bp GCTTGCAGATGGTATTTTGTGGGACTTCTTGGTTTCCACAATCTCTaGAGTCCATTCATCCATCCCATTGGTTTTCTGAAGAACTCTAAT +
Preference number: 2 (lower is better)
Translates to: ACRWYFVGLLGFHNL*SPFIHPIGFLKNSN
Trigger: ATTAGAGTTCTTCAGAAAACCAATGGGATGGATGAATGGACTCAAGAGATTGTGGAAACCAAGAAGTCCCACAAAATACCATCTGCAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR GCA 90 bp CCAATCAGCTTTCCTGGTTCTCCAGCTTGCAGATGGTATTTTGTGGGACTTCTTTTACACCATACCACTTaGCTATTATCAAGCAAATCA +
Preference number: 2 (lower is better)
Translates to: PISFPGSPACRWYFVGLLLHHTT*LLSSKS
Trigger: TGATTTGCTTGATAATAGGCAAGTGGTATGGTGTAA...AAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR GCA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCTGCCAAACTTCATACTaGCAACCCGAGCATTCCCAG +
Preference number: 2 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTCQTSY*QPEHSQ
Trigger: CTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCA...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR GCA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACACTTCCTTGGATTACTaGCAAACTTCATACTGCCAA +
Preference number: 2 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNTSLDY*QTSYCQ
Trigger: TTGGCAGTATGAAGTTTGGCAGTAATCCAAGGAAGT...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR GCA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACATTGTCTGCAGTCTTTaGATATACACCCAGATAGTC +
Preference number: 2 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNIVCSL*IYTQIV
Trigger: GACTATCTGGGTGTATATGCAAAGACTGCAGACAAT...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CCA 90 bp TCATGTTCCCTCACAACCAATGAACCAGAGGTACAAACCAGAAACCCTGACACAGAGGTTAGAGCTTTTTaGATTAGAAATATGCTCAAC +
Preference number: 2 (lower is better)
Translates to: SCSLTTNEPEVQTRNPDTEVRAF*IRNMLN
Trigger: GTTGAGCATATTTCTAATCCAAAAAGCTCTAACCTC...TGTGTCAGGGTTTCTGGTTTGTACCTCTGGTTCATTGGTTGTGAGGGAACATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CCA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCTTAACCCCTGCTACTTaGGAGGCTGAGGCAGAACAA +
Preference number: 2 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTLTPAT*EAEAEQ
Trigger: TTGTTCTGCCTCAGCCTCCCAAGTAGCAGGGGTTAA...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCTTTCCTTTACCCCAGTaGCGCCTGAAGCTAGCTTTT +
Preference number: 2 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTFPLPQ*RLKLAF
Trigger: AAAAGCTAGCTTCAGGCGTCACTGGGGTAAAGGAAA...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCTTTCCCAGAAGCATTTaGACATGCCCATCACTCCAG +
Preference number: 2 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTFPRSI*TCPSLQ
Trigger: CTGGAGTGATGGGCATGTTCAAATGCTTCTGGGAAA...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR GCA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACTCAAGCAAATCAATGTaGTTTTTCCTTTACCCCAGT +
Preference number: 2 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNSSKSM*FFLYPS
Trigger: ACTGGGGTAAAGGAAAAAGCACATTGATTTGCTTGA...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR GCA 90 bp ATGACACTTTGGGGATGGGACCTAGGTCTATACAGGAAATTCATTTATGCTTCAGAAATATGCTCAACCTaGAATTTTTATACTTGCCCT +
Preference number: 2 (lower is better)
Translates to: MTLWGWDLGLYRKFIYASEICST*NFYTCP
Trigger: AGGGCAAGTATAAAAATTGCAGGTTGAGCATATTTC...TGAAGCATAAATGAATTTCCTGTATAGACCTAGGTCCCATCCCCAAAGTGTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR CAA 90 bp ATGTCTGCAAGATGTATATGTTTTCCTTTACACAGGGTACTGGAATaGGAAGTGGAGATAATGAAAGGACCCTTTACTTTCAACTGTAAT +
Preference number: 2 (lower is better)
Translates to: MSARCICFPLHRVLE*EVEIMKGPFTFNCN
Trigger: ATTACAGTTGAAAGTAAAGGGTCCTTTCATTATCTCCACTTCCAATTCCAGTACCCTGTGTAAAGGAAAACATATACATCTTGCAGACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR GCA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCTCCAGGATCTTTTACTaGCCCAAATTACCTGTATCT +
Preference number: 2 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTSRIFY*PKLPVS
Trigger: AGATACAGGTAATTTGGGGCAGTAAAAGATCCTGGA...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR GCA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCACTTCCTTGGATTACTaGCAAACTTCATACTGCCAA +
Preference number: 2 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTTSLDY*QTSYCQ
Trigger: TTGGCAGTATGAAGTTTGGCAGTAATCCAAGGAAGT...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR TCA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCCATATACATGTACCCTaGAGGTTAACTATTTCTTCC +
Preference number: 2 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTHIHVP*RLTISS
Trigger: GGAAGAAATAGTTAACCTTCAGGGTACATGTATATG...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR TCA 72 bp GGAGAATGGCATGAACCCGGGAGGTGGAACTTACAGTaGGCCGAGATAGCGCCACTGCAGTCCGGCCTGAGC +
Preference number: 3 (lower is better)
Translates to: GEWHEPGRWNLQ*AEIAPLQSGLS
Trigger: GCTCAGGCCGGACTGCAGTGGCGCTATCTCGGCTCACTGTAAGTTCCACCTCCCGGGTTCATGCCATTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CAA 90 bp CCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGATGAGCAGGAGAACCGCTaGAGCCCAGGAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: PWITAKLHTANPSIPSLDEQENR*SPGGRG
Trigger: ACCTCTGCCTCCTGGGCTCAAGCGGTTCTCCTGCTC...ATCAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR CCA 72 bp ATCAAGCCTTTGGTCTCAGACCAGGACTTACACCACTaGCCCTTCCAGTTCTCAGGCCTCTGGACCCAGTTT +
Preference number: 3 (lower is better)
Translates to: IKPLVSDQDLHH*PFQFSGLWTQF
Trigger: AAACTGGGTCCAGAGGCCTGAGAACTGGAAGGGCCAGTGGTGTAAGTCCTGGTCTGAGACCAAAGGCTTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR TCA 72 bp CTGGCCCTTCCAGTTCTCAGGCCTCTGGACCCAGTTTaGATTATCCCAATCAGCTTTCCTGGTTCTCCAGCT +
Preference number: 3 (lower is better)
Translates to: LALPVLRPLDPV*IIPISFPGSPA
Trigger: AGCTGGAGAACCAGGAAAGCTGATTGGGATAATTCAAACTGGGTCCAGAGGCCTGAGAACTGGAAGGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR GCA 72 bp TCACGAGGTCAGGATCACTCAGTCTACCCATTCAAATaGCCATCCACCATCCTGGCTAACAGGGTGAAACCC +
Preference number: 3 (lower is better)
Translates to: SRGQDHSVYPFK*PSTILANRVKP
Trigger: GGGTTTCACCCTGTTAGCCAGGATGGTGGATGGGCATTTGAATGGGTAGACTGAGTGATCCTGACCTCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR CCA 72 bp TCTACCCTGAAGCTTTCTCATCCTCTGAGCACCTCATaGACTGTAGCCAAAGGGCTCTCAAAGCCACAGGCA +
Preference number: 3 (lower is better)
Translates to: STLKLSHPLSTS*TVAKGLSKPQA
Trigger: TGCCTGTGGCTTTGAGAGCCCTTTGGCTACAGTCCATGAGGTGCTCAGAGGATGAGAAAGCTTCAGGGTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CAA 90 bp CCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGATAGGCAGGAGAATCACTaGAACCCGGAAGGTGGAGGG +
Preference number: 3 (lower is better)
Translates to: PWITAKLHTANPSIPSLDRQENH*NPEGGG
Trigger: CCCTCCACCTTCCGGGTTCAAGTGATTCTCCTGCCT...ATCAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CAA 90 bp CCAATCAGCTTTCCTGGTTCTCCAGCTTGCAGATGGTATTTTGTGGGACTTCTTAGGCAGGAGAATCACTaGAACCCGGAAGGTGGAGGG +
Preference number: 3 (lower is better)
Translates to: PISFPGSPACRWYFVGLLRQENH*NPEGGG
Trigger: CCCTCCACCTTCCGGGTTCAAGTGATTCTCCTGCCT...AAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR CCA 72 bp GACTTACACCACTGGCCCTTCCAGTTCTCAGGCCTCTaGACCCAGTTTGAATTATCCCAATCAGCTTTCCTG +
Preference number: 3 (lower is better)
Translates to: DLHHWPFQFSGL*TQFELSQSAFL
Trigger: CAGGAAAGCTGATTGGGATAATTCAAACTGGGTCCAGAGGCCTGAGAACTGGAAGGGCCAGTGGTGTAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CAA 90 bp TCGTCTCTTGATTGTTGTCATCCTACCCCTGGGGAATCAGTGACCACTTACATACTGAGGCAGAACAACTaGAACCTGGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: SSLDCCHPTPGESVTTYILRQNN*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGTTGTTCTGCCTCAG...TATGTAAGTGGTCACTGATTCCCCAGGGGTAGGATGACAACAATCAAGAGACGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR TCA 72 bp GTTCCCCTACACGATCTAACCACTAACCTACTTCCTTaGTGTGGTCCCGAGCCAGTCCTCTACACTATCAGT +
Preference number: 3 (lower is better)
Translates to: VPLHDLTTNLLP*CGPEPVLYTIS
Trigger: ACTGATAGTGTAGAGGACTGGCTCGGGACCACATCAAGGAAGTAGGTTAGTGGTTAGATCGTGTAGGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR TCA 72 bp ACTGTAGCCAAAGGGCTCTCAAAGCCACAGGCAGTCTaGCAAAAGTGCTCTCCCCTTTCCTCCATAAGGAAT +
Preference number: 3 (lower is better)
Translates to: TVAKGLSKPQAV*QKCSPLSSIRN
Trigger: ATTCCTTATGGAGGAAAGGGGAGAGCACTTTTGTCAGACTGCCTGTGGCTTTGAGAGCCCTTTGGCTACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CAA 90 bp TTCCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGCATATACATGACACTTaGGGGATGGGACCTAGGTCT +
Preference number: 3 (lower is better)
Translates to: FLGLLPNFILPTRAFPVLHIHDT*GMGPRS
Trigger: AGACCTAGGTCCCATCCCCAAAGTGTCATGTATATG...CAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CAA 90 bp ACAAAAGTGCTCTCCCCTTTCCTCCATAAGGAATTACAACCTGTATGTCTGCAACTGAGGCAGAACAACTaGAACCTGGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: TKVLSPFLHKELQPVCLQLRQNN*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGTTGTTCTGCCTCAG...TTGCAGACATACAGGTTGTAATTCCTTATGGAGGAAAGGGGAGAGCACTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CAA 90 bp CATCCTCTGAGCACCTCATGGACTGTAGCCAAAGGGCTCTCAAAGCCACAGGCAATTACACCATACCACTaGCCTATTATCAAGCAAATC +
Preference number: 3 (lower is better)
Translates to: HPLSTSWTVAKGLSKPQAITPYH*PIIKQI
Trigger: GATTTGCTTGATAATAGGCAAGTGGTATGGTGTAAT...TGCCTGTGGCTTTGAGAGCCCTTTGGCTACAGTCCATGAGGTGCTCAGAGGATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CAA 90 bp CCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGATAAATCTGCTAGACTCTaGAGCATCAAGAGGCTGTCA +
Preference number: 3 (lower is better)
Translates to: PWITAKLHTANPSIPSLDKSARL*SIKRLS
Trigger: TGACAGCCTCTTGATGCTCAAGAGTCTAGCAGATTT...ATCAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CAA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCGAGCAGGAGAACCGCTaGAGCCCAGGAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTEQENR*SPGGRG
Trigger: ACCTCTGCCTCCTGGGCTCAAGCGGTTCTCCTGCTC...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CAA 90 bp CCAATCAGCTTTCCTGGTTCTCCAGCTTGCAGATGGTATTTTGTGGGACTTCTTACCTCTATTCGTCTCTaGATTGTTGTCATCCTACCC +
Preference number: 3 (lower is better)
Translates to: PISFPGSPACRWYFVGLLTSIRL*IVVILP
Trigger: GGGTAGGATGACAACAATCAAGAGACGAATAGAGGT...AAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CAA 90 bp CCAATCAGCTTTCCTGGTTCTCCAGCTTGCAGATGGTATTTTGTGGGACTTCTTCCTCTTCCCCTCACTTaGACGATCTCAAGCAAAATT +
Preference number: 3 (lower is better)
Translates to: PISFPGSPACRWYFVGLLPLPLT*TISSKI
Trigger: AATTTTGCTTGAGATCGTCAAAGTGAGGGGAAGAGG...AAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR TCA 72 bp CAAATCTACACTGCCTCATCCCTCCTTCTCAGTGTATaGCCTTGCCTTGCTAACTCCAGAGAAATTTCAGAG +
Preference number: 3 (lower is better)
Translates to: QIYTASSLLLSV*PCLANSREISE
Trigger: CTCTGAAATTTCTCTGGAGTTAGCAAGGCAAGGTCATACACTGAGAAGGAGGGATGAGGCAGTGTAGATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR TCA 72 bp TACCTCTGGAAGAGATTGGCATTTGAATGGGTAGACTaGGTAAAGATGACCTTCACCAATGCAGGTGGGCAT +
Preference number: 3 (lower is better)
Translates to: YLWKRLAFEWVD*VKMTFTNAGGH
Trigger: ATGCCCACCTGCATTGGTGAAGGTCATCTTTACTCAGTCTACCCATTCAAATGCCAATCTCTTCCAGAGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR CCA 72 bp ATCCCAATCAGCTTTCCTGGTTCTCCAGCTTGCAGATaGTATTTTGTGGGACTTCTTGGTTTCCACAATCTC +
Preference number: 3 (lower is better)
Translates to: IPISFPGSPACR*YFVGLLGFHNL
Trigger: GAGATTGTGGAAACCAAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR CCA 72 bp TCTGGACCCAGTTTGAATTATCCCAATCAGCTTTCCTaGTTCTCCAGCTTGCAGATGGTATTTTGTGGGACT +
Preference number: 3 (lower is better)
Translates to: SGPSLNYPNQLS*FSSLQMVFCGT
Trigger: AGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGGGATAATTCAAACTGGGTCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR CCA 72 bp GGTAGACTGAGTAAAGATGACCTTCACCAATGCAGGTaGGCATCATCCTATCCACGGAAGGTTCAAATAGAA +
Preference number: 3 (lower is better)
Translates to: GRLSKDDLHQCR*ASSYPRKVQIE
Trigger: TTCTATTTGAACCTTCCGTGGATAGGATGATGCCCACCTGCATTGGTGAAGGTCATCTTTACTCAGTCTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CAA 90 bp CCAATCAGCTTTCCTGGTTCTCCAGCTTGCAGATGGTATTTTGTGGGACTTCTTTATAACATTTCTCCTTaGCTTACTACCCTCTTCCCC +
Preference number: 3 (lower is better)
Translates to: PISFPGSPACRWYFVGLLYNISP*LTTLFP
Trigger: GGGGAAGAGGGTAGTAAGCAAAGGAGAAATGTTATA...AAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CAA 90 bp CCAATCAGCTTTCCTGGTTCTCCAGCTTGCAGATGGTATTTTGTGGGACTTCTTCACAGGGTACTGGAATaGGAAGTGGAGATAATGAAA +
Preference number: 3 (lower is better)
Translates to: PISFPGSPACRWYFVGLLHRVLE*EVEIMK
Trigger: TTTCATTATCTCCACTTCCAATTCCAGTACCCTGTG...AAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR CCA 72 bp TTCTCCAGCTTGCAGATGGTATTTTGTGGGACTTCTTaGTTTCCACAATCTCTTGAGTCCATTCATCCATCC +
Preference number: 3 (lower is better)
Translates to: FSSLQMVFCGTS*FPQSLESIHPS
Trigger: GGATGGATGAATGGACTCAAGAGATTGTGGAAACCAAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR CCA 72 bp TGTGCACTTGACTGGGCTAAGGATTGTTCAGCTAGCTaGCGAAACATTTCTAAATCTGTGAGATTACCTCTG +
Preference number: 3 (lower is better)
Translates to: CALDWAKDCSAS*RNISKSVRLPL
Trigger: CAGAGGTAATCTCACAGATTTAGAAATGTTTCGCCAGCTAGCTGAACAATCCTTAGCCCAGTCAAGTGCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CAA 90 bp ACAAAAGTGCTCTCCCCTTTCCTCCATAAGGAATTACAACCTGTATGTCTGCAAACCACTGTCACTTCCTaGGATTACTGCCAAACTTCA +
Preference number: 3 (lower is better)
Translates to: TKVLSPFLHKELQPVCLQTTVTS*DYCQTS
Trigger: TGAAGTTTGGCAGTAATCCAAGGAAGTGACAGTGGT...TTGCAGACATACAGGTTGTAATTCCTTATGGAGGAAAGGGGAGAGCACTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CAA 90 bp CCAATCAGCTTTCCTGGTTCTCCAGCTTGCAGATGGTATTTTGTGGGACTTCTTATGACTGCAATGATTTaGCACTACCTATCCAAGTAT +
Preference number: 3 (lower is better)
Translates to: PISFPGSPACRWYFVGLLMTAMI*HYLSKY
Trigger: ATACTTGGATAGGTAGTGCAAAATCATTGCAGTCAT...AAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CAA 90 bp TCATGTTCCCTCACAACCAATGAACCAGAGGTACAAACCAGAAACCCTGACACAATTACACCATACCACTaGCCTATTATCAAGCAAATC +
Preference number: 3 (lower is better)
Translates to: SCSLTTNEPEVQTRNPDTITPYH*PIIKQI
Trigger: GATTTGCTTGATAATAGGCAAGTGGTATGGTGTAAT...TGTGTCAGGGTTTCTGGTTTGTACCTCTGGTTCATTGGTTGTGAGGGAACATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CAA 90 bp ACAAAAGTGCTCTCCCCTTTCCTCCATAAGGAATTACAACCTGTATGTCTGCAAGATTGTCTGCAGTCTTaGCATATACACCCAGATAGT +
Preference number: 3 (lower is better)
Translates to: TKVLSPFLHKELQPVCLQDCLQS*HIHPDS
Trigger: ACTATCTGGGTGTATATGCAAAGACTGCAGACAATC...TTGCAGACATACAGGTTGTAATTCCTTATGGAGGAAAGGGGAGAGCACTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR TCA 72 bp ACATTGTTTTCTCCCTTATTTCTGCAGTCCAATGCATaGTCAAGACCACCTAAATGGCATTACCACTGTCAC +
Preference number: 3 (lower is better)
Translates to: TLFSPLFLQSNA*SRPPKWHYHCH
Trigger: GTGACAGTGGTAATGCCATTTAGGTGGTCTTGATCATGCATTGGACTGCAGAAATAAGGGAGAAAACAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR TCA 72 bp GCATCTTATTTGACTCATTTGATCCTTGCCACAATATaGGGCAGGTATCAGGATCCTTGCTTTTTAGATGAG +
Preference number: 3 (lower is better)
Translates to: ASYLTHLILATI*GRYQDPCFLDE
Trigger: CTCATCTAAAAAGCAAGGATCCTGATACCTGCCTCATATTGTGGCAAGGATCAAATGAGTCAAATAAGATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR TCA 72 bp ATTGTTCAGCTAGCTGGCGAAACATTTCTAAATCTGTaGGATTACCTCTGGAAGAGATTGGCATTTGAATGG +
Preference number: 3 (lower is better)
Translates to: IVQLAGETFLNL*DYLWKRLAFEW
Trigger: CCATTCAAATGCCAATCTCTTCCAGAGGTAATCTCACAGATTTAGAAATGTTTCGCCAGCTAGCTGAACAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR TCA 72 bp AGAGCAAGTCTAAATTGGTACAGCCTACTGAAAGAGTaGTACAAACACTCACATTCTTCAATCCAGCAAGTG +
Preference number: 3 (lower is better)
Translates to: RASLNWYSLLKE*YKHSHSSIQQV
Trigger: CACTTGCTGGATTGAAGAATGTGAGTGTTTGTATCACTCTTTCAGTAGGCTGTACCAATTTAGACTTGCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR CCA 72 bp TCTGATGTTGGAGTTAAGTGCATATACATGACACTTTaGGGATGGGACCTAGGTCTATACAGGAAATTCATT +
Preference number: 3 (lower is better)
Translates to: SDVGVKCIYMTL*GWDLGLYRKFI
Trigger: AATGAATTTCCTGTATAGACCTAGGTCCCATCCCCAAAGTGTCATGTATATGCACTTAACTCCAACATCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR CCA 72 bp TTAGTAAGAATTGTTATGGTTATGTGTGCACTTGACTaGGCTAAGGATTGTTCAGCTAGCTGGCGAAACATT +
Preference number: 3 (lower is better)
Translates to: LVRIVMVMCALD*AKDCSASWRNI
Trigger: AATGTTTCGCCAGCTAGCTGAACAATCCTTAGCCCAGTCAAGTGCACACATAACCATAACAATTCTTACTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR CCA 72 bp AACACTCACATTCTTCAATCCAGCAAGTGCACTGATTaGCAATGTGCATCAGATAAACATCATTGTGTACAG +
Preference number: 3 (lower is better)
Translates to: NTHILQSSKCTD*QCASDKHHCVQ
Trigger: CTGTACACAATGATGTTTATCTGATGCACATTGCCAATCAGTGCACTTGCTGGATTGAAGAATGTGAGTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CAA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCAAATCTGCTAGACTCTaGAGCATCAAGAGGCTGTCA +
Preference number: 3 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTKSARL*SIKRLS
Trigger: TGACAGCCTCTTGATGCTCAAGAGTCTAGCAGATTT...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR GCA 72 bp AGTGATACAAACACTCACATTCTTCAATCCAGCAAGTaGACTGATTGGCAATGTGCATCAGATAAACATCAT +
Preference number: 3 (lower is better)
Translates to: SDTNTHILQSSK*TDWQCASDKHH
Trigger: ATGATGTTTATCTGATGCACATTGCCAATCAGTGCACTTGCTGGATTGAAGAATGTGAGTGTTTGTATCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR-3UTR CAA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCAGAAACCCTGACACATaGTTTTCTCCCTTATTTCTG +
Preference number: 3 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTRNPDT*FSPLFL
Trigger: CAGAAATAAGGGAGAAAACAATGTGTCAGGGTTTCT...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR TCA 72 bp GCATCATCCGAAATGTCTATCAATAGAGGTCAAACGTaGACATTCATGTTGTGGATTATTATGCAGAAGATA +
Preference number: 3 (lower is better)
Translates to: ASSEMSINRGQT*TFMLWIIMQKI
Trigger: TATCTTCTGCATAATAATCCACAACATGAATGTTCACGTTTGACCTCTATTGATAGACATTTCGGATGATGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR CCA 72 bp AGAATAAATACAGAACTCGGGCATTTAGTGCACTATTaGACCAGGAAAATACAAGTTAAAGTAAGATACTAC +
Preference number: 3 (lower is better)
Translates to: RINTELGHLVHY*TRKIQVKVRYY
Trigger: GTAGTATCTTACTTTAACTTGTATTTTCCTGGTCCAATAGTGCACTAAATGCCCGAGTTCTGTATTTATTCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp ACGCCCGCCAGCTCCCAGGTCCGCAAGGCCCACACGGCAGGACAAGGCTCTCGGCTTCCCGGGACCCTCTaGGAGCCGTTTGGCGCCTCA +
Preference number: 4 (lower is better)
Translates to: TPASSQVRKAHTAGQGSRLPGTL*EPFGAS
Trigger: TGAGGCGCCAAACGGCTCCCAGAGGGTCCCGGGAAG...CCGAGAGCCTTGTCCTGCCGTGTGGGCCTTGCGGACCTGGGAGCTGGCGGGCGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435633.5
CDS-3UTR CCA 90 bp AACGCCCGCCAGCTCCCAGGTCCGCAAGGCCCACACGGCAGGACAAGGCTCTCGGCTTCCCAGCGGAGGTaGAGGTCGAGCGGCATGGTC +
Preference number: 4 (lower is better)
Translates to: NARQLPGPQGPHGRTRLSASQRR*RSSGMV
Trigger: GACCATGCCGCTCGACCTCCACCTCCGCTGGGAAGC...CGAGAGCCTTGTCCTGCCGTGTGGGCCTTGCGGACCTGGGAGCTGGCGGGCGTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435633.5
CDS-3UTR CCA 90 bp TTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTACCCTTAGTACCAGGTGCTGGAGGTCGAGCGGCATaGTCGACGGCCCCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LAAAAAAAAAAVPLVPGAGGRAA*STAPEP
Trigger: GGGCTCCGGGGCCGTCGACCATGCCGCTCGACCTCC...AGCACCTGGTACTAAGGGTACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000416518.1
ENST00000435633.5
CDS-3UTR CCA 90 bp CATCCTCTGAGCACCTCATGGACTGTAGCCAAAGGGCTCTCAAAGCCACAGGCAGGAGGTCGAGCGGCATaGTCGACGGCCCCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: HPLSTSWTVAKGLSKPQAGGRAA*STAPEP
Trigger: GGGCTCCGGGGCCGTCGACCATGCCGCTCGACCTCC...TGCCTGTGGCTTTGAGAGCCCTTTGGCTACAGTCCATGAGGTGCTCAGAGGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396203.7
CDS-3UTR CCA 90 bp TGGATGGACGAAATCAGCAAACGCCTCAGTAGCTTAAGCCCGGTTCCCAACGCCGGAGGTCGAGCGGCATaGTCGACGGCCCCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: WMDEISKRLSSLSPVPNAGGRAA*STAPEP
Trigger: GGGCTCCGGGGCCGTCGACCATGCCGCTCGACCTCC...GGCGTTGGGAACCGGGCTTAAGCTACTGAGGCGTTTGCTGATTTCGTCCATCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435633.5
CDS-3UTR TCA 90 bp TTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTACCCTTAGTACCAGGTGCTCCTCCACGAAGCGCCTaGACACCATGCGCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: LAAAAAAAAAAVPLVPGAPPRSA*TPCASR
Trigger: CCGGGAAGCGCATGGTGTTCAGGCGCTTCGTGGAGG...AGCACCTGGTACTAAGGGTACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416518.1
CDS-3UTR GCA 90 bp ACGAAGCGCCTGAACACCTGGATGGACGAAATCAGCAAACGCCTCAGTAGCTTAAGGGCCCGATTCCGCTaGACAGCCGGCCCGGGGACC +
Preference number: 4 (lower is better)
Translates to: TKRLNTWMDEISKRLSSLRARFR*TAGPGT
Trigger: GGTCCCCGGGCCGGCTGTGCAGCGGAATCGGGCCCT...TAAGCTACTGAGGCGTTTGCTGATTTCGTCCATCCAGGTGTTCAGGCGCTTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435633.5
CDS-3UTR CCA 90 bp TTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTACCCTTAGTACCAGGTGCTGCTTCCCAGCGGAGGTaGAGGTCGAGCGGCATGGTC +
Preference number: 4 (lower is better)
Translates to: LAAAAAAAAAAVPLVPGAASQRR*RSSGMV
Trigger: GACCATGCCGCTCGACCTCCACCTCCGCTGGGAAGC...AGCACCTGGTACTAAGGGTACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416518.1
ENST00000435633.5
CDS-3UTR CCA 90 bp TTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTACCCTTAGTACCAGGTGCTCCTCTGGGAGCCGTTTaGCGCCTCAGCTTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: LAAAAAAAAAAVPLVPGAPLGAV*RLSFPA
Trigger: CGCTGGGAAGCTGAGGCGCCAAACGGCTCCCAGAGG...AGCACCTGGTACTAAGGGTACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416518.1
ENST00000435633.5
CDS-3UTR CCA 90 bp TTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTACCCTTAGTACCAGGTGCTCTTCCCGGGACCCTCTaGGAGCCGTTTGGCGCCTCA +
Preference number: 4 (lower is better)
Translates to: LAAAAAAAAAAVPLVPGALPGTL*EPFGAS
Trigger: TGAGGCGCCAAACGGCTCCCAGAGGGTCCCGGGAAG...AGCACCTGGTACTAAGGGTACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416518.1
ENST00000435633.5
CDS-3UTR TCA 90 bp TTCCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGAGGCAGAGGTTGCAGTaGGCCGAGATCACCCCACCC +
Preference number: 4 (lower is better)
Translates to: FLGLLPNFILPTRAFPVLRQRLQ*AEITPP
Trigger: GGGTGGGGTGATCTCGGCTCACTGCAACCTCTGCCT...CAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp CCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGATAGGCAGAGGTTGCAGTaGGCCGAGATCACCCCACCC +
Preference number: 4 (lower is better)
Translates to: PWITAKLHTANPSIPSLDRQRLQ*AEITPP
Trigger: GGGTGGGGTGATCTCGGCTCACTGCAACCTCTGCCT...ATCAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp CCAATCAGCTTTCCTGGTTCTCCAGCTTGCAGATGGTATTTTGTGGGACTTCTTCCTCCACGAAGCGCCTaGACACCATGCGCTTCCCGG +
Preference number: 4 (lower is better)
Translates to: PISFPGSPACRWYFVGLLPPRSA*TPCASR
Trigger: CCGGGAAGCGCATGGTGTTCAGGCGCTTCGTGGAGG...AAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396203.7
CDS-3UTR TCA 90 bp ACGAAGCGCCTGAACACCTGGATGGACGAAATCAGCAAACGCCTCAGTAGCTTACCTCCACGAAGCGCCTaGACACCTGGATGGACGAAA +
Preference number: 4 (lower is better)
Translates to: TKRLNTWMDEISKRLSSLPPRSA*TPGWTK
Trigger: TTTCGTCCATCCAGGTGTTCAGGCGCTTCGTGGAGG...TAAGCTACTGAGGCGTTTGCTGATTTCGTCCATCCAGGTGTTCAGGCGCTTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435633.5
CDS-3UTR CCA 90 bp CAGCCTGAAATCAGCATTCTTTTCGTATGCCATCCCCCGTCTCCAATGAGGGTGGGGGTTTCACCATGTTaGCCAAGCTGGTCTCGGACC +
Preference number: 4 (lower is better)
Translates to: QPEISILFVCHPPSPMRVGVSPC*PSWSRT
Trigger: GGTCCGAGACCAGCTTGGCCAACATGGTGAAACCCC...CACCCTCATTGGAGACGGGGGATGGCATACGAAAAGAATGCTGATTTCAGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp TCGTCTCTTGATTGTTGTCATCCTACCCCTGGGGAATCAGTGACCACTTACATACCTCTGGGAGCCGTTTaGCGCCTCAGCTTCCCAGCG +
Preference number: 4 (lower is better)
Translates to: SSLDCCHPTPGESVTTYIPLGAV*RLSFPA
Trigger: CGCTGGGAAGCTGAGGCGCCAAACGGCTCCCAGAGG...TATGTAAGTGGTCACTGATTCCCCAGGGGTAGGATGACAACAATCAAGAGACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396203.7
CDS-3UTR TCA 90 bp TTCCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGAGCAGGAGAACCGCTTaGGCCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: FLGLLPNFILPTRAFPVLSRRTA*AQEAEV
Trigger: AACCTCTGCCTCCTGGGCTCAAGCGGTTCTCCTGCT...CAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp CATCCTCTGAGCACCTCATGGACTGTAGCCAAAGGGCTCTCAAAGCCACAGGCAGTTTCCCACCCCTCATaGCTCCTTTCCAACCTCTAT +
Preference number: 4 (lower is better)
Translates to: HPLSTSWTVAKGLSKPQAVSHPS*LLSNLY
Trigger: ATAGAGGTTGGAAAGGAGTCATGAGGGGTGGGAAAC...TGCCTGTGGCTTTGAGAGCCCTTTGGCTACAGTCCATGAGGTGCTCAGAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp TTCCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGCCAGGAGGCAGAGGTTaGGCTGAGCCAAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: FLGLLPNFILPTRAFPVLPGGRG*AEPRSC
Trigger: GCACGATCTTGGCTCAGCGCAACCTCTGCCTCCTGG...CAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp CAGCCTGAAATCAGCATTCTTTTCGTATGCCATCCCCCGTCTCCAATGAGGGTGTGGGAGACTGGGGAGTaGATCACGAGGTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: QPEISILFVCHPPSPMRVWETGE*ITRSGS
Trigger: TGATCCTGACCTCGTGATCCACTCCCCAGTCTCCCA...CACCCTCATTGGAGACGGGGGATGGCATACGAAAAGAATGCTGATTTCAGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp TTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTACCCTTAGTACCAGGTGCTAAGCGCCTGAACACCTaGATGGACGAAATCAGCAAA +
Preference number: 4 (lower is better)
Translates to: LAAAAAAAAAAVPLVPGAKRLNT*MDEISK
Trigger: TTTGCTGATTTCGTCCATCCAGGTGTTCAGGCGCTT...AGCACCTGGTACTAAGGGTACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435633.5
3UTR CAA 72 bp ACTGGCCCTTCCAGTTCTCAGGCCTCTGGACCCAGTTaGAATTATCCCAATCAGCTTTCCTGGTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: TGPSSSQASGPS*NYPNQLSWFSS
Trigger: GCTGGAGAACCAGGAAAGCTGATTGGGATAATTCAAACTGGGTCCAGAGGCCTGAGAACTGGAAGGGCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp CCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGATGGCAGGAGAATGGCATaGACCCGGGAGGTGGAACTT +
Preference number: 4 (lower is better)
Translates to: PWITAKLHTANPSIPSLDGRRMA*TREVEL
Trigger: AAGTTCCACCTCCCGGGTTCATGCCATTCTCCTGCC...ATCAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp CAGCCTGAAATCAGCATTCTTTTCGTATGCCATCCCCCGTCTCCAATGAGGGTGCAAGACCAGTCTGGCTaGCATGGCAAAACCCCATCT +
Preference number: 4 (lower is better)
Translates to: QPEISILFVCHPPSPMRVQDQSG*HGKTPS
Trigger: AGATGGGGTTTTGCCATGTCAGCCAGACTGGTCTTG...CACCCTCATTGGAGACGGGGGATGGCATACGAAAAGAATGCTGATTTCAGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp TTCCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGAGACCCGCCCAACCCTaGGCATGTGTAGAAGAACGC +
Preference number: 4 (lower is better)
Translates to: FLGLLPNFILPTRAFPVLRPAQP*ACVEER
Trigger: GCGTTCTTCTACACATGCGCAGGGTTGGGCGGGTCT...CAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338970.10
CDS-3UTR GCA 90 bp CAGCCTGAAATCAGCATTCTTTTCGTATGCCATCCCCCGTCTCCAATGAGGGTGGTAATGTCAGCTCACTaGAACCTCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: QPEISILFVCHPPSPMRVVMSAH*NLHLLG
Trigger: ACCCAGGAGGTGGAGGTTGCAGTGAGCTGACATTAC...CACCCTCATTGGAGACGGGGGATGGCATACGAAAAGAATGCTGATTTCAGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp CATCCTCTGAGCACCTCATGGACTGTAGCCAAAGGGCTCTCAAAGCCACAGGCAGATGACCTTCACCAATaGAGGTGGGCATCATCCTAT +
Preference number: 4 (lower is better)
Translates to: HPLSTSWTVAKGLSKPQADDLHQ*RWASSY
Trigger: ATAGGATGATGCCCACCTGCATTGGTGAAGGTCATC...TGCCTGTGGCTTTGAGAGCCCTTTGGCTACAGTCCATGAGGTGCTCAGAGGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp CCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGATCTTGAACCCGGAAGGTaGAGGGAGCTGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: PWITAKLHTANPSIPSLDLEPGR*RELRSH
Trigger: GTGCGATCTCAGCTCCCTCCACCTTCCGGGTTCAAG...ATCAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp CAGCCTGAAATCAGCATTCTTTTCGTATGCCATCCCCCGTCTCCAATGAGGGTGCTTCACCAATGCAGGTaGGCATCATCCTATCCACGG +
Preference number: 4 (lower is better)
Translates to: QPEISILFVCHPPSPMRVLHQCR*ASSYPR
Trigger: CCGTGGATAGGATGATGCCCACCTGCATTGGTGAAG...CACCCTCATTGGAGACGGGGGATGGCATACGAAAAGAATGCTGATTTCAGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACGCTTCCCAGCGGAGGTaGAGGTCGAGCGGCATGGTC +
Preference number: 4 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNASQRR*RSSGMV
Trigger: GACCATGCCGCTCGACCTCCACCTCCGCTGGGAAGC...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396203.7
CDS-3UTR TCA 90 bp ACAAAAGTGCTCTCCCCTTTCCTCCATAAGGAATTACAACCTGTATGTCTGCAAGGCGGGTGTATCACCTaGGGTCAGGAGCTCGAGACC +
Preference number: 4 (lower is better)
Translates to: TKVLSPFLHKELQPVCLQGGCIT*GQELET
Trigger: GGTCTCGAGCTCCTGACCTCAGGTGATACACCCGCC...TTGCAGACATACAGGTTGTAATTCCTTATGGAGGAAAGGGGAGAGCACTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp CATCCTCTGAGCACCTCATGGACTGTAGCCAAAGGGCTCTCAAAGCCACAGGCACCTCTGGACCCAGTTTaGATTATCCCAATCAGCTTT +
Preference number: 4 (lower is better)
Translates to: HPLSTSWTVAKGLSKPQAPLDPV*IIPISF
Trigger: AAAGCTGATTGGGATAATTCAAACTGGGTCCAGAGG...TGCCTGTGGCTTTGAGAGCCCTTTGGCTACAGTCCATGAGGTGCTCAGAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp CAGCCTGAAATCAGCATTCTTTTCGTATGCCATCCCCCGTCTCCAATGAGGGTGTGCCAAACTTCATACTaGCAACCCGAGCATTCCCAG +
Preference number: 4 (lower is better)
Translates to: QPEISILFVCHPPSPMRVCQTSY*QPEHSQ
Trigger: CTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCA...CACCCTCATTGGAGACGGGGGATGGCATACGAAAAGAATGCTGATTTCAGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp CAGCCTGAAATCAGCATTCTTTTCGTATGCCATCCCCCGTCTCCAATGAGGGTGAGTTCAAGACCAGTCTaGCTGACATGGCAAAACCCC +
Preference number: 4 (lower is better)
Translates to: QPEISILFVCHPPSPMRVSSRPV*LTWQNP
Trigger: GGGGTTTTGCCATGTCAGCCAGACTGGTCTTGAACT...CACCCTCATTGGAGACGGGGGATGGCATACGAAAAGAATGCTGATTTCAGGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp CCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGATCCTCTGAGCACCTCATaGACTGTAGCCAAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: PWITAKLHTANPSIPSLDPLSTS*TVAKGL
Trigger: GAGCCCTTTGGCTACAGTCCATGAGGTGCTCAGAGG...ATCAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp TCCTTTACCCCAGTGACGCCTGAAGCTAGCTTTTGGTTAGGAAACAAATTTATTCTTCCCGGGACCCTCTaGGAGCCGTTTGGCGCCTCA +
Preference number: 4 (lower is better)
Translates to: SFTPVTPEASFWLGNKFILPGTL*EPFGAS
Trigger: TGAGGCGCCAAACGGCTCCCAGAGGGTCCCGGGAAG...AATAAATTTGTTTCCTAACCAAAAGCTAGCTTCAGGCGTCACTGGGGTAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396203.7
CDS-3UTR TCA 90 bp ACAAAAGTGCTCTCCCCTTTCCTCCATAAGGAATTACAACCTGTATGTCTGCAACACTGCAGTCCGGCCTaGGCAACAGAACGAGACTCC +
Preference number: 4 (lower is better)
Translates to: TKVLSPFLHKELQPVCLQHCSPA*ATERDS
Trigger: GGAGTCTCGTTCTGTTGCTCAGGCCGGACTGCAGTG...TTGCAGACATACAGGTTGTAATTCCTTATGGAGGAAAGGGGAGAGCACTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp TCCTTTACCCCAGTGACGCCTGAAGCTAGCTTTTGGTTAGGAAACAAATTTATTGGCGGGTGTATCACCTaGGGTCAGGAGCTCGAGACC +
Preference number: 4 (lower is better)
Translates to: SFTPVTPEASFWLGNKFIGGCIT*GQELET
Trigger: GGTCTCGAGCTCCTGACCTCAGGTGATACACCCGCC...AATAAATTTGTTTCCTAACCAAAAGCTAGCTTCAGGCGTCACTGGGGTAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp CAGCCTGAAATCAGCATTCTTTTCGTATGCCATCCCCCGTCTCCAATGAGGGTGTTCCCTCACAACCAATaGACCAGAGGTACAAACCAG +
Preference number: 4 (lower is better)
Translates to: QPEISILFVCHPPSPMRVFPHNQ*TRGTNQ
Trigger: CTGGTTTGTACCTCTGGTTCATTGGTTGTGAGGGAA...CACCCTCATTGGAGACGGGGGATGGCATACGAAAAGAATGCTGATTTCAGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp TTCCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGCCACCGTGCCCAGCCTaGAATCAGCATTCTTTTCGT +
Preference number: 4 (lower is better)
Translates to: FLGLLPNFILPTRAFPVLPPCPA*NQHSFR
Trigger: ACGAAAAGAATGCTGATTTCAGGCTGGGCACGGTGG...CAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACTGGCCAGGCTGGTCTTaGACCCCTGATTCACCTGCC +
Preference number: 4 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNWPGWS*TPDSPA
Trigger: GGCAGGTGAATCAGGGGTTCAAGACCAGCCTGGCCA...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp ACAAAAGTGCTCTCCCCTTTCCTCCATAAGGAATTACAACCTGTATGTCTGCAATGGCCAGGCTGGTCTTaGACCCCTGATTCACCTGCC +
Preference number: 4 (lower is better)
Translates to: TKVLSPFLHKELQPVCLQWPGWS*TPDSPA
Trigger: GGCAGGTGAATCAGGGGTTCAAGACCAGCCTGGCCA...TTGCAGACATACAGGTTGTAATTCCTTATGGAGGAAAGGGGAGAGCACTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp CATCCTCTGAGCACCTCATGGACTGTAGCCAAAGGGCTCTCAAAGCCACAGGCATTTGAATGGGTAGACTaGGTAAAGATGACCTTCACC +
Preference number: 4 (lower is better)
Translates to: HPLSTSWTVAKGLSKPQAFEWVD*VKMTFT
Trigger: GGTGAAGGTCATCTTTACTCAGTCTACCCATTCAAA...TGCCTGTGGCTTTGAGAGCCCTTTGGCTACAGTCCATGAGGTGCTCAGAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp ACAAAAGTGCTCTCCCCTTTCCTCCATAAGGAATTACAACCTGTATGTCTGCAACCAGGAGGCAGAGGTTaGGCTGAGCCAAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: TKVLSPFLHKELQPVCLQPGGRG*AEPRSC
Trigger: GCACGATCTTGGCTCAGCGCAACCTCTGCCTCCTGG...TTGCAGACATACAGGTTGTAATTCCTTATGGAGGAAAGGGGAGAGCACTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp CAGCCTGAAATCAGCATTCTTTTCGTATGCCATCCCCCGTCTCCAATGAGGGTGACCCAATCCACACTATaGTACCAGACTGACCTTCCT +
Preference number: 4 (lower is better)
Translates to: QPEISILFVCHPPSPMRVTQSTL*YQTDLP
Trigger: AGGAAGGTCAGTCTGGTAGCATAGTGTGGATTGGGT...CACCCTCATTGGAGACGGGGGATGGCATACGAAAAGAATGCTGATTTCAGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp TCCTTTACCCCAGTGACGCCTGAAGCTAGCTTTTGGTTAGGAAACAAATTTATTGATCACCCCACCCACTaGACTCCAGCCTGGGCGAGA +
Preference number: 4 (lower is better)
Translates to: SFTPVTPEASFWLGNKFIDHPTH*TPAWAR
Trigger: TCTCGCCCAGGCTGGAGTGCAGTGGGTGGGGTGATC...AATAAATTTGTTTCCTAACCAAAAGCTAGCTTCAGGCGTCACTGGGGTAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp CAGCCTGAAATCAGCATTCTTTTCGTATGCCATCCCCCGTCTCCAATGAGGGTGTTGTCATCCTACCCCTaGGGAATCAGTGACCACTTA +
Preference number: 4 (lower is better)
Translates to: QPEISILFVCHPPSPMRVLSSYP*GISDHL
Trigger: TAAGTGGTCACTGATTCCCCAGGGGTAGGATGACAA...CACCCTCATTGGAGACGGGGGATGGCATACGAAAAGAATGCTGATTTCAGGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR CAA 72 bp AAACCCATCCTCTCCTGCCCTCGGTTGTTGATGCTCTaGATTCTTGATCAAGCCTTTGGTCTCAGACCAGGA +
Preference number: 4 (lower is better)
Translates to: KPILSCPRLLML*ILDQAFGLRPG
Trigger: TCCTGGTCTGAGACCAAAGGCTTGATCAAGAATCAAGAGCATCAACAACCGAGGGCAGGAGAGGATGGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp TCCTTTACCCCAGTGACGCCTGAAGCTAGCTTTTGGTTAGGAAACAAATTTATTCACTGCAGTCCGGCCTaGGCAACAGAACGAGACTCC +
Preference number: 4 (lower is better)
Translates to: SFTPVTPEASFWLGNKFIHCSPA*ATERDS
Trigger: GGAGTCTCGTTCTGTTGCTCAGGCCGGACTGCAGTG...AATAAATTTGTTTCCTAACCAAAAGCTAGCTTCAGGCGTCACTGGGGTAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp ATGACACTTTGGGGATGGGACCTAGGTCTATACAGGAAATTCATTTATGCTTCAGAAGGTGGAGGGAGCTaGGATCGCACCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: MTLWGWDLGLYRKFIYASEGGGS*DRTTAL
Trigger: GAGTGCAGTGGTGCGATCTCAGCTCCCTCCACCTTC...TGAAGCATAAATGAATTTCCTGTATAGACCTAGGTCCCATCCCCAAAGTGTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp TCCTTTACCCCAGTGACGCCTGAAGCTAGCTTTTGGTTAGGAAACAAATTTATTAGCAGGAGAACCGCTTaGGCCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SFTPVTPEASFWLGNKFISRRTA*AQEAEV
Trigger: AACCTCTGCCTCCTGGGCTCAAGCGGTTCTCCTGCT...AATAAATTTGTTTCCTAACCAAAAGCTAGCTTCAGGCGTCACTGGGGTAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp TCGTCTCTTGATTGTTGTCATCCTACCCCTGGGGAATCAGTGACCACTTACATACAAGACCAGTCTGGCTaGCATGGCAAAACCCCATCT +
Preference number: 4 (lower is better)
Translates to: SSLDCCHPTPGESVTTYIQDQSG*HGKTPS
Trigger: AGATGGGGTTTTGCCATGTCAGCCAGACTGGTCTTG...TATGTAAGTGGTCACTGATTCCCCAGGGGTAGGATGACAACAATCAAGAGACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACGGCGGACAGATCACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNGGQIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTGATCTGTCCGCC...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp TCATGTTCCCTCACAACCAATGAACCAGAGGTACAAACCAGAAACCCTGACACAAAGCCACAGGCAGTCTaGCAAAAGTGCTCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: SCSLTTNEPEVQTRNPDTKPQAV*QKCSPL
Trigger: AAGGGGAGAGCACTTTTGTCAGACTGCCTGTGGCTT...TGTGTCAGGGTTTCTGGTTTGTACCTCTGGTTCATTGGTTGTGAGGGAACATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACCTGGTCTTGAACCCCTaGTTCACCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNLVLNP*FTCLSL
Trigger: GAGGCTGAGGCAGGTGAATCAGGGGTTCAAGACCAG...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp CATCCTCTGAGCACCTCATGGACTGTAGCCAAAGGGCTCTCAAAGCCACAGGCAATTGTCTGCAGTCTTTaGATATACACCCAGATAGTC +
Preference number: 4 (lower is better)
Translates to: HPLSTSWTVAKGLSKPQAIVCSL*IYTQIV
Trigger: GACTATCTGGGTGTATATGCAAAGACTGCAGACAAT...TGCCTGTGGCTTTGAGAGCCCTTTGGCTACAGTCCATGAGGTGCTCAGAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACCTTGAACCCGGAAGGTaGAGGGAGCTGAGATCGCAC +
Preference number: 4 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNLEPGR*RELRSH
Trigger: GTGCGATCTCAGCTCCCTCCACCTTCCGGGTTCAAG...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp CCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGATCACTACATTCCAGCCTaGGCAAGAGTAAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PWITAKLHTANPSIPSLDHYIPA*ARVRLC
Trigger: ACAGAGCCTTACTCTTGCCCAGGCTGGAATGTAGTG...ATCAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp CCAATCAGCTTTCCTGGTTCTCCAGCTTGCAGATGGTATTTTGTGGGACTTCTTCTTCACCAATGCAGGTaGGCATCATCCTATCCACGG +
Preference number: 4 (lower is better)
Translates to: PISFPGSPACRWYFVGLLLHQCR*ASSYPR
Trigger: CCGTGGATAGGATGATGCCCACCTGCATTGGTGAAG...AAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp CATCCTCTGAGCACCTCATGGACTGTAGCCAAAGGGCTCTCAAAGCCACAGGCAAGAGCAAGTCTAAATTaGTACAGCCTACTGAAAGAG +
Preference number: 4 (lower is better)
Translates to: HPLSTSWTVAKGLSKPQARASLN*YSLLKE
Trigger: CTCTTTCAGTAGGCTGTACCAATTTAGACTTGCTCT...TGCCTGTGGCTTTGAGAGCCCTTTGGCTACAGTCCATGAGGTGCTCAGAGGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp CCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGATAATCTGCTAGACTCTTaGGCATCAAGAGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: PWITAKLHTANPSIPSLDNLLDS*ASRGCH
Trigger: GTGACAGCCTCTTGATGCTCAAGAGTCTAGCAGATT...ATCAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp CCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGATCTGCAGTCCAATGCATaGTCAAGACCACCTAAATGG +
Preference number: 4 (lower is better)
Translates to: PWITAKLHTANPSIPSLDLQSNA*SRPPKW
Trigger: CCATTTAGGTGGTCTTGATCATGCATTGGACTGCAG...ATCAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp TTCCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGCCTCTATTCGTCTCTTaGTTGTTGTCATCCTACCCC +
Preference number: 4 (lower is better)
Translates to: FLGLLPNFILPTRAFPVLPLFVS*LLSSYP
Trigger: GGGGTAGGATGACAACAATCAAGAGACGAATAGAGG...CAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp TCATGTTCCCTCACAACCAATGAACCAGAGGTACAAACCAGAAACCCTGACACAGTTTCCCACCCCTCATaGCTCCTTTCCAACCTCTAT +
Preference number: 4 (lower is better)
Translates to: SCSLTTNEPEVQTRNPDTVSHPS*LLSNLY
Trigger: ATAGAGGTTGGAAAGGAGTCATGAGGGGTGGGAAAC...TGTGTCAGGGTTTCTGGTTTGTACCTCTGGTTCATTGGTTGTGAGGGAACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp ATGACACTTTGGGGATGGGACCTAGGTCTATACAGGAAATTCATTTATGCTTCACTGGTCTTGAACCCCTaGTTCACCTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: MTLWGWDLGLYRKFIYASLVLNP*FTCLSL
Trigger: GAGGCTGAGGCAGGTGAATCAGGGGTTCAAGACCAG...TGAAGCATAAATGAATTTCCTGTATAGACCTAGGTCCCATCCCCAAAGTGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp CCAATCAGCTTTCCTGGTTCTCCAGCTTGCAGATGGTATTTTGTGGGACTTCTTTGCCAAACTTCATACTaGCAACCCGAGCATTCCCAG +
Preference number: 4 (lower is better)
Translates to: PISFPGSPACRWYFVGLLCQTSY*QPEHSQ
Trigger: CTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCA...AAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp CAGCCTGAAATCAGCATTCTTTTCGTATGCCATCCCCCGTCTCCAATGAGGGTGGACTCATTTGATCCTTaGCACAATATGAGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: QPEISILFVCHPPSPMRVDSFDP*HNMRQV
Trigger: TACCTGCCTCATATTGTGGCAAGGATCAAATGAGTC...CACCCTCATTGGAGACGGGGGATGGCATACGAAAAGAATGCTGATTTCAGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp TCGTCTCTTGATTGTTGTCATCCTACCCCTGGGGAATCAGTGACCACTTACATAGCAGGAGTTCAAGACTaGCAGGCAGGAATGTCTTTG +
Preference number: 4 (lower is better)
Translates to: SSLDCCHPTPGESVTTYIAGVQD*QAGMSL
Trigger: CAAAGACATTCCTGCCTGGCAGTCTTGAACTCCTGC...TATGTAAGTGGTCACTGATTCCCCAGGGGTAGGATGACAACAATCAAGAGACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp TCGTCTCTTGATTGTTGTCATCCTACCCCTGGGGAATCAGTGACCACTTACATACACTACATTCCAGCCTaGGCAAGAGTAAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: SSLDCCHPTPGESVTTYIHYIPA*ARVRLC
Trigger: ACAGAGCCTTACTCTTGCCCAGGCTGGAATGTAGTG...TATGTAAGTGGTCACTGATTCCCCAGGGGTAGGATGACAACAATCAAGAGACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp ACAAAAGTGCTCTCCCCTTTCCTCCATAAGGAATTACAACCTGTATGTCTGCAACCTCTGAGCACCTCATaGACTGTAGCCAAAGGGCTC +
Preference number: 4 (lower is better)
Translates to: TKVLSPFLHKELQPVCLQPLSTS*TVAKGL
Trigger: GAGCCCTTTGGCTACAGTCCATGAGGTGCTCAGAGG...TTGCAGACATACAGGTTGTAATTCCTTATGGAGGAAAGGGGAGAGCACTTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp ATGACACTTTGGGGATGGGACCTAGGTCTATACAGGAAATTCATTTATGCTTCAGGGGTTTCACCATGTTaGCCAAGCTGGTCTCGGACC +
Preference number: 4 (lower is better)
Translates to: MTLWGWDLGLYRKFIYASGVSPC*PSWSRT
Trigger: GGTCCGAGACCAGCTTGGCCAACATGGTGAAACCCC...TGAAGCATAAATGAATTTCCTGTATAGACCTAGGTCCCATCCCCAAAGTGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp CATCCTCTGAGCACCTCATGGACTGTAGCCAAAGGGCTCTCAAAGCCACAGGCATCAAATAGAACAAAATaGGGGAGGAAGCGTGAATTT +
Preference number: 4 (lower is better)
Translates to: HPLSTSWTVAKGLSKPQASNRTK*GRKREF
Trigger: AAATTCACGCTTCCTCCCCCATTTTGTTCTATTTGA...TGCCTGTGGCTTTGAGAGCCCTTTGGCTACAGTCCATGAGGTGCTCAGAGGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACTGGGAGACTGGGGAGTaGATCACGAGGTCAGGATCA +
Preference number: 4 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNWETGE*ITRSGS
Trigger: TGATCCTGACCTCGTGATCCACTCCCCAGTCTCCCA...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp TCATGTTCCCTCACAACCAATGAACCAGAGGTACAAACCAGAAACCCTGACACAAATCTGCTAGACTCTTaGGCATCAAGAGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: SCSLTTNEPEVQTRNPDTNLLDS*ASRGCH
Trigger: GTGACAGCCTCTTGATGCTCAAGAGTCTAGCAGATT...TGTGTCAGGGTTTCTGGTTTGTACCTCTGGTTCATTGGTTGTGAGGGAACATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp TCATGTTCCCTCACAACCAATGAACCAGAGGTACAAACCAGAAACCCTGACACATTTCCTTTACCCCAGTaGCGCCTGAAGCTAGCTTTT +
Preference number: 4 (lower is better)
Translates to: SCSLTTNEPEVQTRNPDTFPLPQ*RLKLAF
Trigger: AAAAGCTAGCTTCAGGCGTCACTGGGGTAAAGGAAA...TGTGTCAGGGTTTCTGGTTTGTACCTCTGGTTCATTGGTTGTGAGGGAACATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACACTAACCTACTTCCTTaGTGTGGTCCCGAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNTNLLP*CGPEPV
Trigger: GACTGGCTCGGGACCACATCAAGGAAGTAGGTTAGT...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp TTCCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGGAGCATTCCCAGTCTTaGTCCCATAAGATTCAGTCT +
Preference number: 4 (lower is better)
Translates to: FLGLLPNFILPTRAFPVLEHSQS*SHKIQS
Trigger: AGACTGAATCTTATGGGATCAAGACTGGGAATGCTC...CAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp CCAATCAGCTTTCCTGGTTCTCCAGCTTGCAGATGGTATTTTGTGGGACTTCTTCCTCTATTCGTCTCTTaGTTGTTGTCATCCTACCCC +
Preference number: 4 (lower is better)
Translates to: PISFPGSPACRWYFVGLLPLFVS*LLSSYP
Trigger: GGGGTAGGATGACAACAATCAAGAGACGAATAGAGG...AAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp TTCCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGATCCTACTATCAATCTaGCTCCTAACTCCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: FLGLLPNFILPTRAFPVLILLSI*LLTPAS
Trigger: TGAGGCTGGAGTTAGGAGGCAGATTGATAGTAGGAT...CAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp CAGCCTGAAATCAGCATTCTTTTCGTATGCCATCCCCCGTCTCCAATGAGGGTGATAACATTTCTCCTTTaGTTACTACCCTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: QPEISILFVCHPPSPMRVITFLL*LLPSSP
Trigger: AGGGGAAGAGGGTAGTAAGCAAAGGAGAAATGTTAT...CACCCTCATTGGAGACGGGGGATGGCATACGAAAAGAATGCTGATTTCAGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp TTCCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGGTGCAGCTTGAATACTaGTTCTACCCTGAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: FLGLLPNFILPTRAFPVLVQLEY*FYPEAF
Trigger: GAAAGCTTCAGGGTAGAAGCAGTATTCAAGCTGCAC...CAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACGTAATGTCAGCTCACTaGAACCTCCACCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNVMSAH*NLHLLG
Trigger: ACCCAGGAGGTGGAGGTTGCAGTGAGCTGACATTAC...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp TCGTCTCTTGATTGTTGTCATCCTACCCCTGGGGAATCAGTGACCACTTACATAACCCAATCCACACTATaGTACCAGACTGACCTTCCT +
Preference number: 4 (lower is better)
Translates to: SSLDCCHPTPGESVTTYITQSTL*YQTDLP
Trigger: AGGAAGGTCAGTCTGGTAGCATAGTGTGGATTGGGT...TATGTAAGTGGTCACTGATTCCCCAGGGGTAGGATGACAACAATCAAGAGACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp ACAAAAGTGCTCTCCCCTTTCCTCCATAAGGAATTACAACCTGTATGTCTGCAAAAACCCATCCTCTCCTaGCCTCGGTTGTTGATGCTC +
Preference number: 4 (lower is better)
Translates to: TKVLSPFLHKELQPVCLQKPILS*PRLLML
Trigger: GAGCATCAACAACCGAGGGCAGGAGAGGATGGGTTT...TTGCAGACATACAGGTTGTAATTCCTTATGGAGGAAAGGGGAGAGCACTTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp ATGACACTTTGGGGATGGGACCTAGGTCTATACAGGAAATTCATTTATGCTTCATTGAGGCAGGAGAACTaGTTGAACCCGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: MTLWGWDLGLYRKFIYASLRQEN*LNPGGR
Trigger: TCTGCCTCCCGGGTTCAAGCAGTTCTCCTGCCTCAA...TGAAGCATAAATGAATTTCCTGTATAGACCTAGGTCCCATCCCCAAAGTGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp TCCTTTACCCCAGTGACGCCTGAAGCTAGCTTTTGGTTAGGAAACAAATTTATTTTGAGGCAGGAGAACTaGTTGAACCCGGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: SFTPVTPEASFWLGNKFILRQEN*LNPGGR
Trigger: TCTGCCTCCCGGGTTCAAGCAGTTCTCCTGCCTCAA...AATAAATTTGTTTCCTAACCAAAAGCTAGCTTCAGGCGTCACTGGGGTAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp ACAAAAGTGCTCTCCCCTTTCCTCCATAAGGAATTACAACCTGTATGTCTGCAACCTACTTCCTTGATGTaGTCCCGAGCCAGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: TKVLSPFLHKELQPVCLQPTSLM*SRASPL
Trigger: TAGAGGACTGGCTCGGGACCACATCAAGGAAGTAGG...TTGCAGACATACAGGTTGTAATTCCTTATGGAGGAAAGGGGAGAGCACTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp CCAATCAGCTTTCCTGGTTCTCCAGCTTGCAGATGGTATTTTGTGGGACTTCTTTTGTCATCCTACCCCTaGGGAATCAGTGACCACTTA +
Preference number: 4 (lower is better)
Translates to: PISFPGSPACRWYFVGLLLSSYP*GISDHL
Trigger: TAAGTGGTCACTGATTCCCCAGGGGTAGGATGACAA...AAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR CAA 72 bp CAAGACCACCTAAATGGCATTACCACTGTCACTTCCTaGGATTACTGCCAAACTTCATACTGCCAACCCGAG +
Preference number: 4 (lower is better)
Translates to: QDHLNGITTVTS*DYCQTSYCQPE
Trigger: CTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGGAAGTGACAGTGGTAATGCCATTTAGGTGGTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCGAAGGTGGAGGGAGCTaGGATCGCACCACTGCACTC +
Preference number: 4 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTEGGGS*DRTTAL
Trigger: GAGTGCAGTGGTGCGATCTCAGCTCCCTCCACCTTC...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp ATGACACTTTGGGGATGGGACCTAGGTCTATACAGGAAATTCATTTATGCTTCAAACTACTCAGAAGGCTaGGCAGGAGAACCGCTTGAG +
Preference number: 4 (lower is better)
Translates to: MTLWGWDLGLYRKFIYASNYSEG*AGEPLE
Trigger: CTCAAGCGGTTCTCCTGCTCAGCCTTCTGAGTAGTT...TGAAGCATAAATGAATTTCCTGTATAGACCTAGGTCCCATCCCCAAAGTGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp ATGACACTTTGGGGATGGGACCTAGGTCTATACAGGAAATTCATTTATGCTTCAACTAACCTACTTCCTTaGTGTGGTCCCGAGCCAGTC +
Preference number: 4 (lower is better)
Translates to: MTLWGWDLGLYRKFIYASTNLLP*CGPEPV
Trigger: GACTGGCTCGGGACCACATCAAGGAAGTAGGTTAGT...TGAAGCATAAATGAATTTCCTGTATAGACCTAGGTCCCATCCCCAAAGTGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp CCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGATACAAACCAGAAACCCTaGCACATTGTTTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: PWITAKLHTANPSIPSLDTNQKP*HIVFSL
Trigger: AAGGGAGAAAACAATGTGTCAGGGTTTCTGGTTTGT...ATCAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp ATGACACTTTGGGGATGGGACCTAGGTCTATACAGGAAATTCATTTATGCTTCAAAGCCACAGGCAGTCTaGCAAAAGTGCTCTCCCCTT +
Preference number: 4 (lower is better)
Translates to: MTLWGWDLGLYRKFIYASKPQAV*QKCSPL
Trigger: AAGGGGAGAGCACTTTTGTCAGACTGCCTGTGGCTT...TGAAGCATAAATGAATTTCCTGTATAGACCTAGGTCCCATCCCCAAAGTGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp CAGCCTGAAATCAGCATTCTTTTCGTATGCCATCCCCCGTCTCCAATGAGGGTGGATGTTGGAGTTAAGTaGATATACATGACACTTTGG +
Preference number: 4 (lower is better)
Translates to: QPEISILFVCHPPSPMRVDVGVK*IYMTLW
Trigger: CCAAAGTGTCATGTATATGCACTTAACTCCAACATC...CACCCTCATTGGAGACGGGGGATGGCATACGAAAAGAATGCTGATTTCAGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp CAGCCTGAAATCAGCATTCTTTTCGTATGCCATCCCCCGTCTCCAATGAGGGTGTTTCTCCCTTATTTCTaGAGTCCAATGCATGATCAA +
Preference number: 4 (lower is better)
Translates to: QPEISILFVCHPPSPMRVFLPYF*SPMHDQ
Trigger: TTGATCATGCATTGGACTGCAGAAATAAGGGAGAAA...CACCCTCATTGGAGACGGGGGATGGCATACGAAAAGAATGCTGATTTCAGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp TCCTTTACCCCAGTGACGCCTGAAGCTAGCTTTTGGTTAGGAAACAAATTTATTAAACCCATCCTCTCCTaGCCTCGGTTGTTGATGCTC +
Preference number: 4 (lower is better)
Translates to: SFTPVTPEASFWLGNKFIKPILS*PRLLML
Trigger: GAGCATCAACAACCGAGGGCAGGAGAGGATGGGTTT...AATAAATTTGTTTCCTAACCAAAAGCTAGCTTCAGGCGTCACTGGGGTAAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp TCGTCTCTTGATTGTTGTCATCCTACCCCTGGGGAATCAGTGACCACTTACATACTTCAATCCAGCAAGTaGACTGATTGGCAATGTGCA +
Preference number: 4 (lower is better)
Translates to: SSLDCCHPTPGESVTTYILQSSK*TDWQCA
Trigger: TGCACATTGCCAATCAGTGCACTTGCTGGATTGAAG...TATGTAAGTGGTCACTGATTCCCCAGGGGTAGGATGACAACAATCAAGAGACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp ATGACACTTTGGGGATGGGACCTAGGTCTATACAGGAAATTCATTTATGCTTCAACTAGCCAGACGTGGTaGCACACACCTATAGTCCCA +
Preference number: 4 (lower is better)
Translates to: MTLWGWDLGLYRKFIYASTSQTW*HTPIVP
Trigger: TGGGACTATAGGTGTGTGCCACCACGTCTGGCTAGT...TGAAGCATAAATGAATTTCCTGTATAGACCTAGGTCCCATCCCCAAAGTGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACTTAACCCCTGCTACTTaGGAGGCTGAGGCAGAACAA +
Preference number: 4 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNLTPAT*EAEAEQ
Trigger: TTGTTCTGCCTCAGCCTCCCAAGTAGCAGGGGTTAA...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACAGTTCAAGACCAGTCTaGCTGACATGGCAAAACCCC +
Preference number: 4 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNSSRPV*LTWQNP
Trigger: GGGGTTTTGCCATGTCAGCCAGACTGGTCTTGAACT...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp TTCCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGTCAAGACCACCTAAATaGCATTACCACTGTCACTTC +
Preference number: 4 (lower is better)
Translates to: FLGLLPNFILPTRAFPVLSRPPK*HYHCHF
Trigger: GAAGTGACAGTGGTAATGCCATTTAGGTGGTCTTGA...CAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACGTAATCCCAGTACTTTaGGAGACTGGGGAGTGGATC +
Preference number: 4 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNVIPVL*ETGEWI
Trigger: GATCCACTCCCCAGTCTCCCAAAGTACTGGGATTAC...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp ACAAAAGTGCTCTCCCCTTTCCTCCATAAGGAATTACAACCTGTATGTCTGCAAGTAATCCCAGTACTTTaGGAGACTGGGGAGTGGATC +
Preference number: 4 (lower is better)
Translates to: TKVLSPFLHKELQPVCLQVIPVL*ETGEWI
Trigger: GATCCACTCCCCAGTCTCCCAAAGTACTGGGATTAC...TTGCAGACATACAGGTTGTAATTCCTTATGGAGGAAAGGGGAGAGCACTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCGGCAGGAGAATGGCATaGACCCGGGAGGTGGAACTT +
Preference number: 4 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTGRRMA*TREVEL
Trigger: AAGTTCCACCTCCCGGGTTCATGCCATTCTCCTGCC...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp ACAAAAGTGCTCTCCCCTTTCCTCCATAAGGAATTACAACCTGTATGTCTGCAATTTCCTTTACCCCAGTaGCGCCTGAAGCTAGCTTTT +
Preference number: 4 (lower is better)
Translates to: TKVLSPFLHKELQPVCLQFPLPQ*RLKLAF
Trigger: AAAAGCTAGCTTCAGGCGTCACTGGGGTAAAGGAAA...TTGCAGACATACAGGTTGTAATTCCTTATGGAGGAAAGGGGAGAGCACTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACCTGCAGTCCAATGCATaGTCAAGACCACCTAAATGG +
Preference number: 4 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNLQSNA*SRPPKW
Trigger: CCATTTAGGTGGTCTTGATCATGCATTGGACTGCAG...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACTTTCCCAGAAGCATTTaGACATGCCCATCACTCCAG +
Preference number: 4 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNFPRSI*TCPSLQ
Trigger: CTGGAGTGATGGGCATGTTCAAATGCTTCTGGGAAA...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp ATCAATTATGACTGCAATGATTTTGCACTACCTATCCAAGTATGGGCAGAGAGTCCACCGTGCCCAGCCTaGAATCAGCATTCTTTTCGT +
Preference number: 4 (lower is better)
Translates to: INYDCNDFALPIQVWAESPPCPA*NQHSFR
Trigger: ACGAAAAGAATGCTGATTTCAGGCTGGGCACGGTGG...ACTCTCTGCCCATACTTGGATAGGTAGTGCAAAATCATTGCAGTCATAATTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp TCGTCTCTTGATTGTTGTCATCCTACCCCTGGGGAATCAGTGACCACTTACATATTTGAATGGGTAGACTaGGTAAAGATGACCTTCACC +
Preference number: 4 (lower is better)
Translates to: SSLDCCHPTPGESVTTYIFEWVD*VKMTFT
Trigger: GGTGAAGGTCATCTTTACTCAGTCTACCCATTCAAA...TATGTAAGTGGTCACTGATTCCCCAGGGGTAGGATGACAACAATCAAGAGACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp ACAAAAGTGCTCTCCCCTTTCCTCCATAAGGAATTACAACCTGTATGTCTGCAAATCCAGCAAGTGCACTaGTTGGCAATGTGCATCAGA +
Preference number: 4 (lower is better)
Translates to: TKVLSPFLHKELQPVCLQIQQVH*LAMCIR
Trigger: TCTGATGCACATTGCCAATCAGTGCACTTGCTGGAT...TTGCAGACATACAGGTTGTAATTCCTTATGGAGGAAAGGGGAGAGCACTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp TTCCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGAGCCTACTGAAAGAGTaGTACAAACACTCACATTCT +
Preference number: 4 (lower is better)
Translates to: FLGLLPNFILPTRAFPVLSLLKE*YKHSHS
Trigger: AGAATGTGAGTGTTTGTATCACTCTTTCAGTAGGCT...CAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp CAGCCTGAAATCAGCATTCTTTTCGTATGCCATCCCCCGTCTCCAATGAGGGTGGAAATATGCTCAACCTaGAATTTTTATACTTGCCCT +
Preference number: 4 (lower is better)
Translates to: QPEISILFVCHPPSPMRVEICST*NFYTCP
Trigger: AGGGCAAGTATAAAAATTGCAGGTTGAGCATATTTC...CACCCTCATTGGAGACGGGGGATGGCATACGAAAAGAATGCTGATTTCAGGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp CCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGATACTTCCTTGGATTACTaGCAAACTTCATACTGCCAA +
Preference number: 4 (lower is better)
Translates to: PWITAKLHTANPSIPSLDTSLDY*QTSYCQ
Trigger: TTGGCAGTATGAAGTTTGGCAGTAATCCAAGGAAGT...ATCAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp CCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGATTTTTCAGGCATCGTATaGCTCAGTTACTTTCCTAGA +
Preference number: 4 (lower is better)
Translates to: PWITAKLHTANPSIPSLDFSGIV*LSYFPR
Trigger: TCTAGGAAAGTAACTGAGGCATACGATGCCTGAAAA...ATCAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp ACAAAAGTGCTCTCCCCTTTCCTCCATAAGGAATTACAACCTGTATGTCTGCAAAGCATTCTTTTCGTATaGCATCCCCCGTCTCCAATG +
Preference number: 4 (lower is better)
Translates to: TKVLSPFLHKELQPVCLQSILFV*HPPSPM
Trigger: CATTGGAGACGGGGGATGGCATACGAAAAGAATGCT...TTGCAGACATACAGGTTGTAATTCCTTATGGAGGAAAGGGGAGAGCACTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp TTCCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGCAAACTTCCAAATTTTaGCTATACCGCCAGGTTAGT +
Preference number: 4 (lower is better)
Translates to: FLGLLPNFILPTRAFPVLQTSKF*LYRQVS
Trigger: ACTAACCTGGCGGTATAGGCAAAATTTGGAAGTTTG...CAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp ACAAAAGTGCTCTCCCCTTTCCTCCATAAGGAATTACAACCTGTATGTCTGCAACCTGGTTCTCCAGCTTaGAGATGGTATTTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: TKVLSPFLHKELQPVCLQPGSPA*RWYFVG
Trigger: TCCCACAAAATACCATCTGCAAGCTGGAGAACCAGG...TTGCAGACATACAGGTTGTAATTCCTTATGGAGGAAAGGGGAGAGCACTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp ATCAATTATGACTGCAATGATTTTGCACTACCTATCCAAGTATGGGCAGAGAGTCCTACTTCCTTGATGTaGTCCCGAGCCAGTCCTCTA +
Preference number: 4 (lower is better)
Translates to: INYDCNDFALPIQVWAESPTSLM*SRASPL
Trigger: TAGAGGACTGGCTCGGGACCACATCAAGGAAGTAGG...ACTCTCTGCCCATACTTGGATAGGTAGTGCAAAATCATTGCAGTCATAATTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp TCATGTTCCCTCACAACCAATGAACCAGAGGTACAAACCAGAAACCCTGACACATCAAGACCACCTAAATaGCATTACCACTGTCACTTC +
Preference number: 4 (lower is better)
Translates to: SCSLTTNEPEVQTRNPDTSRPPK*HYHCHF
Trigger: GAAGTGACAGTGGTAATGCCATTTAGGTGGTCTTGA...TGTGTCAGGGTTTCTGGTTTGTACCTCTGGTTCATTGGTTGTGAGGGAACATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp TCATGTTCCCTCACAACCAATGAACCAGAGGTACAAACCAGAAACCCTGACACAGCAGATGGTATTTTGTaGGACTTCTTGGTTTCCACA +
Preference number: 4 (lower is better)
Translates to: SCSLTTNEPEVQTRNPDTADGIL*DFLVST
Trigger: TGTGGAAACCAAGAAGTCCCACAAAATACCATCTGC...TGTGTCAGGGTTTCTGGTTTGTACCTCTGGTTCATTGGTTGTGAGGGAACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACGTGAGATTAAAGAACTaGTTATTTAGGCCAGGCGCG +
Preference number: 4 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNVRLKN*LFRPGA
Trigger: CGCGCCTGGCCTAAATAATCAGTTCTTTAATCTCAC...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp ACAAAAGTGCTCTCCCCTTTCCTCCATAAGGAATTACAACCTGTATGTCTGCAACTCTTCCCCTCACTTTaGCGATCTCAAGCAAAATTC +
Preference number: 4 (lower is better)
Translates to: TKVLSPFLHKELQPVCLQLFPSL*RSQAKF
Trigger: GAATTTTGCTTGAGATCGTCAAAGTGAGGGGAAGAG...TTGCAGACATACAGGTTGTAATTCCTTATGGAGGAAAGGGGAGAGCACTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp TCCTTTACCCCAGTGACGCCTGAAGCTAGCTTTTGGTTAGGAAACAAATTTATTATCCAGCAAGTGCACTaGTTGGCAATGTGCATCAGA +
Preference number: 4 (lower is better)
Translates to: SFTPVTPEASFWLGNKFIIQQVH*LAMCIR
Trigger: TCTGATGCACATTGCCAATCAGTGCACTTGCTGGAT...AATAAATTTGTTTCCTAACCAAAAGCTAGCTTCAGGCGTCACTGGGGTAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp TCGTCTCTTGATTGTTGTCATCCTACCCCTGGGGAATCAGTGACCACTTACATAACTTCCTTGGATTACTaGCAAACTTCATACTGCCAA +
Preference number: 4 (lower is better)
Translates to: SSLDCCHPTPGESVTTYITSLDY*QTSYCQ
Trigger: TTGGCAGTATGAAGTTTGGCAGTAATCCAAGGAAGT...TATGTAAGTGGTCACTGATTCCCCAGGGGTAGGATGACAACAATCAAGAGACGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp TTCCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGTTTCTCCCTTATTTCTaGAGTCCAATGCATGATCAA +
Preference number: 4 (lower is better)
Translates to: FLGLLPNFILPTRAFPVLFLPYF*SPMHDQ
Trigger: TTGATCATGCATTGGACTGCAGAAATAAGGGAGAAA...CAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp CCAATCAGCTTTCCTGGTTCTCCAGCTTGCAGATGGTATTTTGTGGGACTTCTTTACAACCTGTATGTCTaGAAATCTACACTGCCTCAT +
Preference number: 4 (lower is better)
Translates to: PISFPGSPACRWYFVGLLYNLYV*KSTLPH
Trigger: ATGAGGCAGTGTAGATTTGCAGACATACAGGTTGTA...AAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp ATGACACTTTGGGGATGGGACCTAGGTCTATACAGGAAATTCATTTATGCTTCAAGCATTCTTTTCGTATaGCATCCCCCGTCTCCAATG +
Preference number: 4 (lower is better)
Translates to: MTLWGWDLGLYRKFIYASSILFV*HPPSPM
Trigger: CATTGGAGACGGGGGATGGCATACGAAAAGAATGCT...TGAAGCATAAATGAATTTCCTGTATAGACCTAGGTCCCATCCCCAAAGTGTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp ATGACACTTTGGGGATGGGACCTAGGTCTATACAGGAAATTCATTTATGCTTCACCTGGTTCTCCAGCTTaGAGATGGTATTTTGTGGGA +
Preference number: 4 (lower is better)
Translates to: MTLWGWDLGLYRKFIYASPGSPA*RWYFVG
Trigger: TCCCACAAAATACCATCTGCAAGCTGGAGAACCAGG...TGAAGCATAAATGAATTTCCTGTATAGACCTAGGTCCCATCCCCAAAGTGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp TCCTTTACCCCAGTGACGCCTGAAGCTAGCTTTTGGTTAGGAAACAAATTTATTGATGACCTTCACCAATaGAGGTGGGCATCATCCTAT +
Preference number: 4 (lower is better)
Translates to: SFTPVTPEASFWLGNKFIDDLHQ*RWASSY
Trigger: ATAGGATGATGCCCACCTGCATTGGTGAAGGTCATC...AATAAATTTGTTTCCTAACCAAAAGCTAGCTTCAGGCGTCACTGGGGTAAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp ACAAAAGTGCTCTCCCCTTTCCTCCATAAGGAATTACAACCTGTATGTCTGCAACTTCAATCCAGCAAGTaGACTGATTGGCAATGTGCA +
Preference number: 4 (lower is better)
Translates to: TKVLSPFLHKELQPVCLQLQSSK*TDWQCA
Trigger: TGCACATTGCCAATCAGTGCACTTGCTGGATTGAAG...TTGCAGACATACAGGTTGTAATTCCTTATGGAGGAAAGGGGAGAGCACTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp ATCAATTATGACTGCAATGATTTTGCACTACCTATCCAAGTATGGGCAGAGAGTTTAACCCCTGCTACTTaGGAGGCTGAGGCAGAACAA +
Preference number: 4 (lower is better)
Translates to: INYDCNDFALPIQVWAESLTPAT*EAEAEQ
Trigger: TTGTTCTGCCTCAGCCTCCCAAGTAGCAGGGGTTAA...ACTCTCTGCCCATACTTGGATAGGTAGTGCAAAATCATTGCAGTCATAATTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp CCAATCAGCTTTCCTGGTTCTCCAGCTTGCAGATGGTATTTTGTGGGACTTCTTAGCAAGTGCACTGATTaGCAATGTGCATCAGATAAA +
Preference number: 4 (lower is better)
Translates to: PISFPGSPACRWYFVGLLSKCTD*QCASDK
Trigger: TTTATCTGATGCACATTGCCAATCAGTGCACTTGCT...AAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR CAA 72 bp TTGAATTATCCCAATCAGCTTTCCTGGTTCTCCAGCTaGCAGATGGTATTTTGTGGGACTTCTTGGTTTCCA +
Preference number: 4 (lower is better)
Translates to: LNYPNQLSWFSS*QMVFCGTSWFP
Trigger: TGGAAACCAAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGGGATAATTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCAACTACTCAGAAGGCTaGGCAGGAGAACCGCTTGAG +
Preference number: 4 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTNYSEG*AGEPLE
Trigger: CTCAAGCGGTTCTCCTGCTCAGCCTTCTGAGTAGTT...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp TCCTTTACCCCAGTGACGCCTGAAGCTAGCTTTTGGTTAGGAAACAAATTTATTGAGCATTCCCAGTCTTaGTCCCATAAGATTCAGTCT +
Preference number: 4 (lower is better)
Translates to: SFTPVTPEASFWLGNKFIEHSQS*SHKIQS
Trigger: AGACTGAATCTTATGGGATCAAGACTGGGAATGCTC...AATAAATTTGTTTCCTAACCAAAAGCTAGCTTCAGGCGTCACTGGGGTAAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp TCGTCTCTTGATTGTTGTCATCCTACCCCTGGGGAATCAGTGACCACTTACATAACATTTCTAAATCTGTaGGATTACCTCTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: SSLDCCHPTPGESVTTYITFLNL*DYLWKR
Trigger: TCTCTTCCAGAGGTAATCTCACAGATTTAGAAATGT...TATGTAAGTGGTCACTGATTCCCCAGGGGTAGGATGACAACAATCAAGAGACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp TTCCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGGAAATATGCTCAACCTaGAATTTTTATACTTGCCCT +
Preference number: 4 (lower is better)
Translates to: FLGLLPNFILPTRAFPVLEICST*NFYTCP
Trigger: AGGGCAAGTATAAAAATTGCAGGTTGAGCATATTTC...CAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp TCGTCTCTTGATTGTTGTCATCCTACCCCTGGGGAATCAGTGACCACTTACATATCAAGCAAATCAATGTaGTTTTTCCTTTACCCCAGT +
Preference number: 4 (lower is better)
Translates to: SSLDCCHPTPGESVTTYISSKSM*FFLYPS
Trigger: ACTGGGGTAAAGGAAAAAGCACATTGATTTGCTTGA...TATGTAAGTGGTCACTGATTCCCCAGGGGTAGGATGACAACAATCAAGAGACGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp CCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGATACCAGAAAAAGAAATTaGCATCATCCGAAATGTCTA +
Preference number: 4 (lower is better)
Translates to: PWITAKLHTANPSIPSLDTRKRN*HHPKCL
Trigger: TAGACATTTCGGATGATGCCAATTTCTTTTTCTGGT...ATCAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR CAA 72 bp TGGTATTTTGTGGGACTTCTTGGTTTCCACAATCTCTaGAGTCCATTCATCCATCCCATTGGTTTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: WYFVGLLGFHNL*SPFIHPIGFLK
Trigger: CTTCAGAAAACCAATGGGATGGATGAATGGACTCAAGAGATTGTGGAAACCAAGAAGTCCCACAAAATACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCGCATGGCCAACATGGTaGAACCCCATCTCCACTAAA +
Preference number: 4 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTAWPTW*NPISTK
Trigger: TTTAGTGGAGATGGGGTTTCACCATGTTGGCCATGC...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp ATCAATTATGACTGCAATGATTTTGCACTACCTATCCAAGTATGGGCAGAGAGTCTCTTCCCCTCACTTTaGCGATCTCAAGCAAAATTC +
Preference number: 4 (lower is better)
Translates to: INYDCNDFALPIQVWAESLFPSL*RSQAKF
Trigger: GAATTTTGCTTGAGATCGTCAAAGTGAGGGGAAGAG...ACTCTCTGCCCATACTTGGATAGGTAGTGCAAAATCATTGCAGTCATAATTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACAGCCTACTGAAAGAGTaGTACAAACACTCACATTCT +
Preference number: 4 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNSLLKE*YKHSHS
Trigger: AGAATGTGAGTGTTTGTATCACTCTTTCAGTAGGCT...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp TCATGTTCCCTCACAACCAATGAACCAGAGGTACAAACCAGAAACCCTGACACATTACACCATACCACTTaGCTATTATCAAGCAAATCA +
Preference number: 4 (lower is better)
Translates to: SCSLTTNEPEVQTRNPDTLHHTT*LLSSKS
Trigger: TGATTTGCTTGATAATAGGCAAGTGGTATGGTGTAA...TGTGTCAGGGTTTCTGGTTTGTACCTCTGGTTCATTGGTTGTGAGGGAACATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACCTACCTATCCAAGTATaGGCAGAGAGTGAGATTAAA +
Preference number: 4 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNLPIQV*AESEIK
Trigger: TTTAATCTCACTCTCTGCCCATACTTGGATAGGTAG...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp ATCAATTATGACTGCAATGATTTTGCACTACCTATCCAAGTATGGGCAGAGAGTTTTAAAATGTATTCCTaGCCAGAAGCGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: INYDCNDFALPIQVWAESFKMYS*PEAVAH
Trigger: GTGAGCCACCGCTTCTGGCCAGGAATACATTTTAAA...ACTCTCTGCCCATACTTGGATAGGTAGTGCAAAATCATTGCAGTCATAATTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp ATCAATTATGACTGCAATGATTTTGCACTACCTATCCAAGTATGGGCAGAGAGTACAAACCAGAAACCCTaGCACATTGTTTTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: INYDCNDFALPIQVWAESTNQKP*HIVFSL
Trigger: AAGGGAGAAAACAATGTGTCAGGGTTTCTGGTTTGT...ACTCTCTGCCCATACTTGGATAGGTAGTGCAAAATCATTGCAGTCATAATTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp TCCTTTACCCCAGTGACGCCTGAAGCTAGCTTTTGGTTAGGAAACAAATTTATTCTGGACTACATATCATaGTTAACTACTCTGAAGCGT +
Preference number: 4 (lower is better)
Translates to: SFTPVTPEASFWLGNKFILDYIS*LTTLKR
Trigger: ACGCTTCAGAGTAGTTAATCATGATATGTAGTCCAG...AATAAATTTGTTTCCTAACCAAAAGCTAGCTTCAGGCGTCACTGGGGTAAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp ATGACACTTTGGGGATGGGACCTAGGTCTATACAGGAAATTCATTTATGCTTCATCCAGGATCTTTTACTaGCCCAAATTACCTGTATCT +
Preference number: 4 (lower is better)
Translates to: MTLWGWDLGLYRKFIYASSRIFY*PKLPVS
Trigger: AGATACAGGTAATTTGGGGCAGTAAAAGATCCTGGA...TGAAGCATAAATGAATTTCCTGTATAGACCTAGGTCCCATCCCCAAAGTGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp ATGACACTTTGGGGATGGGACCTAGGTCTATACAGGAAATTCATTTATGCTTCAAGGCATGCTCCACCATaGCTGTCTAATTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: MTLWGWDLGLYRKFIYASRHAPP*LSNFCI
Trigger: AATACAAAAATTAGACAGGCATGGTGGAGCATGCCT...TGAAGCATAAATGAATTTCCTGTATAGACCTAGGTCCCATCCCCAAAGTGTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp ATGACACTTTGGGGATGGGACCTAGGTCTATACAGGAAATTCATTTATGCTTCACTACCTATCCAAGTATaGGCAGAGAGTGAGATTAAA +
Preference number: 4 (lower is better)
Translates to: MTLWGWDLGLYRKFIYASLPIQV*AESEIK
Trigger: TTTAATCTCACTCTCTGCCCATACTTGGATAGGTAG...TGAAGCATAAATGAATTTCCTGTATAGACCTAGGTCCCATCCCCAAAGTGTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp ATCAATTATGACTGCAATGATTTTGCACTACCTATCCAAGTATGGGCAGAGAGTGCAGATGGTATTTTGTaGGACTTCTTGGTTTCCACA +
Preference number: 4 (lower is better)
Translates to: INYDCNDFALPIQVWAESADGIL*DFLVST
Trigger: TGTGGAAACCAAGAAGTCCCACAAAATACCATCTGC...ACTCTCTGCCCATACTTGGATAGGTAGTGCAAAATCATTGCAGTCATAATTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp TCCTTTACCCCAGTGACGCCTGAAGCTAGCTTTTGGTTAGGAAACAAATTTATTCATATACATGTACCCTaGAGGTTAACTATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: SFTPVTPEASFWLGNKFIHIHVP*RLTISS
Trigger: GGAAGAAATAGTTAACCTTCAGGGTACATGTATATG...AATAAATTTGTTTCCTAACCAAAAGCTAGCTTCAGGCGTCACTGGGGTAAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp ATGACACTTTGGGGATGGGACCTAGGTCTATACAGGAAATTCATTTATGCTTCAACATTTCTAAATCTGTaGGATTACCTCTGGAAGAGA +
Preference number: 4 (lower is better)
Translates to: MTLWGWDLGLYRKFIYASTFLNL*DYLWKR
Trigger: TCTCTTCCAGAGGTAATCTCACAGATTTAGAAATGT...TGAAGCATAAATGAATTTCCTGTATAGACCTAGGTCCCATCCCCAAAGTGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp ATGACACTTTGGGGATGGGACCTAGGTCTATACAGGAAATTCATTTATGCTTCAGATGTTGGAGTTAAGTaGATATACATGACACTTTGG +
Preference number: 4 (lower is better)
Translates to: MTLWGWDLGLYRKFIYASDVGVK*IYMTLW
Trigger: CCAAAGTGTCATGTATATGCACTTAACTCCAACATC...TGAAGCATAAATGAATTTCCTGTATAGACCTAGGTCCCATCCCCAAAGTGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp ATCAATTATGACTGCAATGATTTTGCACTACCTATCCAAGTATGGGCAGAGAGTTCCAGGATCTTTTACTaGCCCAAATTACCTGTATCT +
Preference number: 4 (lower is better)
Translates to: INYDCNDFALPIQVWAESSRIFY*PKLPVS
Trigger: AGATACAGGTAATTTGGGGCAGTAAAAGATCCTGGA...ACTCTCTGCCCATACTTGGATAGGTAGTGCAAAATCATTGCAGTCATAATTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACTTACACCATACCACTTaGCTATTATCAAGCAAATCA +
Preference number: 4 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNLHHTT*LLSSKS
Trigger: TGATTTGCTTGATAATAGGCAAGTGGTATGGTGTAA...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCGTGCAGCTTGAATACTaGTTCTACCCTGAAGCTTTC +
Preference number: 4 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTVQLEY*FYPEAF
Trigger: GAAAGCTTCAGGGTAGAAGCAGTATTCAAGCTGCAC...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCTTTAAAATGTATTCCTaGCCAGAAGCGGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTFKMYS*PEAVAH
Trigger: GTGAGCCACCGCTTCTGGCCAGGAATACATTTTAAA...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp TCCTTTACCCCAGTGACGCCTGAAGCTAGCTTTTGGTTAGGAAACAAATTTATTTCAAATAGAACAAAATaGGGGAGGAAGCGTGAATTT +
Preference number: 4 (lower is better)
Translates to: SFTPVTPEASFWLGNKFISNRTK*GRKREF
Trigger: AAATTCACGCTTCCTCCCCCATTTTGTTCTATTTGA...AATAAATTTGTTTCCTAACCAAAAGCTAGCTTCAGGCGTCACTGGGGTAAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp ATCAATTATGACTGCAATGATTTTGCACTACCTATCCAAGTATGGGCAGAGAGTAGAGCAAGTCTAAATTaGTACAGCCTACTGAAAGAG +
Preference number: 4 (lower is better)
Translates to: INYDCNDFALPIQVWAESRASLN*YSLLKE
Trigger: CTCTTTCAGTAGGCTGTACCAATTTAGACTTGCTCT...ACTCTCTGCCCATACTTGGATAGGTAGTGCAAAATCATTGCAGTCATAATTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp ACAAAAGTGCTCTCCCCTTTCCTCCATAAGGAATTACAACCTGTATGTCTGCAACATTTAGTGCACTATTaGACCAGGAAAATACAAGTT +
Preference number: 4 (lower is better)
Translates to: TKVLSPFLHKELQPVCLQHLVHY*TRKIQV
Trigger: AACTTGTATTTTCCTGGTCCAATAGTGCACTAAATG...TTGCAGACATACAGGTTGTAATTCCTTATGGAGGAAAGGGGAGAGCACTTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp ATCAATTATGACTGCAATGATTTTGCACTACCTATCCAAGTATGGGCAGAGAGTCATATACATGTACCCTaGAGGTTAACTATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: INYDCNDFALPIQVWAESHIHVP*RLTISS
Trigger: GGAAGAAATAGTTAACCTTCAGGGTACATGTATATG...ACTCTCTGCCCATACTTGGATAGGTAGTGCAAAATCATTGCAGTCATAATTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCATATACATGACACTTTaGGGATGGGACCTAGGTCTA +
Preference number: 4 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTIYMTL*GWDLGL
Trigger: TAGACCTAGGTCCCATCCCCAAAGTGTCATGTATAT...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp TCCTTTACCCCAGTGACGCCTGAAGCTAGCTTTTGGTTAGGAAACAAATTTATTCATTTAGTGCACTATTaGACCAGGAAAATACAAGTT +
Preference number: 4 (lower is better)
Translates to: SFTPVTPEASFWLGNKFIHLVHY*TRKIQV
Trigger: AACTTGTATTTTCCTGGTCCAATAGTGCACTAAATG...AATAAATTTGTTTCCTAACCAAAAGCTAGCTTCAGGCGTCACTGGGGTAAAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
3UTR CAA 72 bp AGATGTATATGTTTTCCTTTACACAGGGTACTGGAATaGGAAGTGGAGATAATGAAAGGACCCTTTACTTTC +
Preference number: 4 (lower is better)
Translates to: RCICFPLHRVLE*EVEIMKGPFTF
Trigger: GAAAGTAAAGGGTCCTTTCATTATCTCCACTTCCAATTCCAGTACCCTGTGTAAAGGAAAACATATACATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR TCA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCCTGGACTACATATCATaGTTAACTACTCTGAAGCGT +
Preference number: 4 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTLDYIS*LTTLKR
Trigger: ACGCTTCAGAGTAGTTAATCATGATATGTAGTCCAG...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCCAAACTTCCAAATTTTaGCTATACCGCCAGGTTAGT +
Preference number: 4 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTQTSKF*LYRQVS
Trigger: ACTAACCTGGCGGTATAGGCAAAATTTGGAAGTTTG...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CCA 90 bp ATCAATTATGACTGCAATGATTTTGCACTACCTATCCAAGTATGGGCAGAGAGTGAGGTTAGAGCTTTTTaGATTAGAAATATGCTCAAC +
Preference number: 4 (lower is better)
Translates to: INYDCNDFALPIQVWAESEVRAF*IRNMLN
Trigger: GTTGAGCATATTTCTAATCCAAAAAGCTCTAACCTC...ACTCTCTGCCCATACTTGGATAGGTAGTGCAAAATCATTGCAGTCATAATTGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR GCA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCTCAAGCAAATCAATGTaGTTTTTCCTTTACCCCAGT +
Preference number: 4 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTSSKSM*FFLYPS
Trigger: ACTGGGGTAAAGGAAAAAGCACATTGATTTGCTTGA...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS CCA 90 bp GAGCCGCATCAGCCATCCAGCTCCAGCGGCGGAGGCGCGCACGCGTaGCCCAAGGCGCGCCAGGCCTGCCGGGCCCTCCACGCGCTCGCC +
Preference number: 5 (lower is better)
Translates to: EPHQPSSSSGGGAHA*PKARQACRALHALA
Trigger: GGCGAGCGCGTGGAGGGCCCGGCAGGCCTGGCGCGCCTTGGGCCACGCGTGCGCGCCTCCGCCGCTGGAGCTGGATGGCTGATGCGGCTC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435633.5
CDS GCA 90 bp GGCGAGTCCGGGAAGGGCGCGAGTCCGGGAAGGGCCCGATTCCGCTaGACAGCCGGCCCGGGGACCCTCACCATGCGCTTCCCGGGACCC +
Preference number: 5 (lower is better)
Translates to: GESGKGASPGRARFR*TAGPGTLTMRFPGP
Trigger: GGGTCCCGGGAAGCGCATGGTGAGGGTCCCCGGGCCGGCTGTGCAGCGGAATCGGGCCCTTCCCGGACTCGCGCCCTTCCCGGACTCGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435633.5
CDS CCA 90 bp CACAGCCGGCCCGGGGACCCTCACCATGCGCTTCCCGGGACCCTCTaGGAGCCGTTTGGCGCCTCAGCTTCCCAGCGGAGGTGGAGGTCG +
Preference number: 5 (lower is better)
Translates to: HSRPGDPHHALPGTL*EPFGASASQRRWRS
Trigger: CGACCTCCACCTCCGCTGGGAAGCTGAGGCGCCAAACGGCTCCCAGAGGGTCCCGGGAAGCGCATGGTGAGGGTCCCCGGGCCGGCTGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435633.5
CDS GCA 90 bp GAAGGGCCCGATTCCGCTGCACAGCCGGCCCGGGGACCCTCACCATaGGCTTCCCGGGACCCTCTGGGAGCCGTTTGGCGCCTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: EGPDSAAQPARGPSP*ASRDPLGAVWRLSF
Trigger: GAAGCTGAGGCGCCAAACGGCTCCCAGAGGGTCCCGGGAAGCGCATGGTGAGGGTCCCCGGGCCGGCTGTGCAGCGGAATCGGGCCCTTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435633.5
CDS CCA 90 bp CGTTTGGCGCCTCAGCTTCCCAGCGGAGGTGGAGGTCGAGCGGCATaGTCGACGGCCCCGGAGCCCGCAACAGTAAGACTCACCATGTTG +
Preference number: 5 (lower is better)
Translates to: RLAPQLPSGGGGRAA*STAPEPATVRLTML
Trigger: CAACATGGTGAGTCTTACTGTTGCGGGCTCCGGGGCCGTCGACCATGCCGCTCGACCTCCACCTCCGCTGGGAAGCTGAGGCGCCAAACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396203.7
ENST00000416518.1
CDS-3UTR CAA 90 bp TTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTACCCTTAGTACCAGGTGCTCCCTCTGGGAGCCGTTaGGCGCCTCAGCTTCCCAGC +
Preference number: 5 (lower is better)
Translates to: LAAAAAAAAAAVPLVPGAPSGSR*APQLPS
Trigger: GCTGGGAAGCTGAGGCGCCAAACGGCTCCCAGAGGG...AGCACCTGGTACTAAGGGTACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000416518.1
ENST00000435633.5
CDS-3UTR CAA 90 bp CATCCTCTGAGCACCTCATGGACTGTAGCCAAAGGGCTCTCAAAGCCACAGGCAAGGCAGGAGAATCACTaGAACCCGGAAGGTGGAGGG +
Preference number: 5 (lower is better)
Translates to: HPLSTSWTVAKGLSKPQARQENH*NPEGGG
Trigger: CCCTCCACCTTCCGGGTTCAAGTGATTCTCCTGCCT...TGCCTGTGGCTTTGAGAGCCCTTTGGCTACAGTCCATGAGGTGCTCAGAGGATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp CAGCCTGAAATCAGCATTCTTTTCGTATGCCATCCCCCGTCTCCAATGAGGGTGCGGGGTTTCACCATGTaGGCCAAGCTGGTCTCGGAC +
Preference number: 5 (lower is better)
Translates to: QPEISILFVCHPPSPMRVRGFTM*AKLVSD
Trigger: GTCCGAGACCAGCTTGGCCAACATGGTGAAACCCCG...CACCCTCATTGGAGACGGGGGATGGCATACGAAAAGAATGCTGATTTCAGGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp TCGTCTCTTGATTGTTGTCATCCTACCCCTGGGGAATCAGTGACCACTTACATACCCTCTGGGAGCCGTTaGGCGCCTCAGCTTCCCAGC +
Preference number: 5 (lower is better)
Translates to: SSLDCCHPTPGESVTTYIPSGSR*APQLPS
Trigger: GCTGGGAAGCTGAGGCGCCAAACGGCTCCCAGAGGG...TATGTAAGTGGTCACTGATTCCCCAGGGGTAGGATGACAACAATCAAGAGACGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396203.7
CDS-3UTR CAA 90 bp TCATGTTCCCTCACAACCAATGAACCAGAGGTACAAACCAGAAACCCTGACACAGAGCAGGAGAACCGCTaGAGCCCAGGAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: SCSLTTNEPEVQTRNPDTEQENR*SPGGRG
Trigger: ACCTCTGCCTCCTGGGCTCAAGCGGTTCTCCTGCTC...TGTGTCAGGGTTTCTGGTTTGTACCTCTGGTTCATTGGTTGTGAGGGAACATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp CATCCTCTGAGCACCTCATGGACTGTAGCCAAAGGGCTCTCAAAGCCACAGGCATCCTGGTTCTCCAGCTaGCAGATGGTATTTTGTGGG +
Preference number: 5 (lower is better)
Translates to: HPLSTSWTVAKGLSKPQASWFSS*QMVFCG
Trigger: CCCACAAAATACCATCTGCAAGCTGGAGAACCAGGA...TGCCTGTGGCTTTGAGAGCCCTTTGGCTACAGTCCATGAGGTGCTCAGAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp CATCCTCTGAGCACCTCATGGACTGTAGCCAAAGGGCTCTCAAAGCCACAGGCACATATACATGACACTTaGGGGATGGGACCTAGGTCT +
Preference number: 5 (lower is better)
Translates to: HPLSTSWTVAKGLSKPQAHIHDT*GMGPRS
Trigger: AGACCTAGGTCCCATCCCCAAAGTGTCATGTATATG...TGCCTGTGGCTTTGAGAGCCCTTTGGCTACAGTCCATGAGGTGCTCAGAGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp TTCCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGCTGAGGCAGAACAACTaGAACCTGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: FLGLLPNFILPTRAFPVLLRQNN*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGTTGTTCTGCCTCAG...CAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp CATCCTCTGAGCACCTCATGGACTGTAGCCAAAGGGCTCTCAAAGCCACAGGCAACCACTGTCACTTCCTaGGATTACTGCCAAACTTCA +
Preference number: 5 (lower is better)
Translates to: HPLSTSWTVAKGLSKPQATTVTS*DYCQTS
Trigger: TGAAGTTTGGCAGTAATCCAAGGAAGTGACAGTGGT...TGCCTGTGGCTTTGAGAGCCCTTTGGCTACAGTCCATGAGGTGCTCAGAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp CATCCTCTGAGCACCTCATGGACTGTAGCCAAAGGGCTCTCAAAGCCACAGGCAACCTCTATTCGTCTCTaGATTGTTGTCATCCTACCC +
Preference number: 5 (lower is better)
Translates to: HPLSTSWTVAKGLSKPQATSIRL*IVVILP
Trigger: GGGTAGGATGACAACAATCAAGAGACGAATAGAGGT...TGCCTGTGGCTTTGAGAGCCCTTTGGCTACAGTCCATGAGGTGCTCAGAGGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp TCATGTTCCCTCACAACCAATGAACCAGAGGTACAAACCAGAAACCCTGACACACTGAGGCAGAACAACTaGAACCTGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: SCSLTTNEPEVQTRNPDTLRQNN*NLGGGG
Trigger: ACCTCCACCTCCCAGGTTCAAGTTGTTCTGCCTCAG...TGTGTCAGGGTTTCTGGTTTGTACCTCTGGTTCATTGGTTGTGAGGGAACATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp CATCCTCTGAGCACCTCATGGACTGTAGCCAAAGGGCTCTCAAAGCCACAGGCACACAGGGTACTGGAATaGGAAGTGGAGATAATGAAA +
Preference number: 5 (lower is better)
Translates to: HPLSTSWTVAKGLSKPQAHRVLE*EVEIMK
Trigger: TTTCATTATCTCCACTTCCAATTCCAGTACCCTGTG...TGCCTGTGGCTTTGAGAGCCCTTTGGCTACAGTCCATGAGGTGCTCAGAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp CATCCTCTGAGCACCTCATGGACTGTAGCCAAAGGGCTCTCAAAGCCACAGGCACAGGCAGGAATGTCTTaGTTTACTGCTGATGGAAAT +
Preference number: 5 (lower is better)
Translates to: HPLSTSWTVAKGLSKPQAQAGMS*FTADGN
Trigger: ATTTCCATCAGCAGTAAACAAAGACATTCCTGCCTG...TGCCTGTGGCTTTGAGAGCCCTTTGGCTACAGTCCATGAGGTGCTCAGAGGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp CATCCTCTGAGCACCTCATGGACTGTAGCCAAAGGGCTCTCAAAGCCACAGGCAAGAAACCCTGACACATaGTTTTCTCCCTTATTTCTG +
Preference number: 5 (lower is better)
Translates to: HPLSTSWTVAKGLSKPQARNPDT*FSPLFL
Trigger: CAGAAATAAGGGAGAAAACAATGTGTCAGGGTTTCT...TGCCTGTGGCTTTGAGAGCCCTTTGGCTACAGTCCATGAGGTGCTCAGAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp CAGCCTGAAATCAGCATTCTTTTCGTATGCCATCCCCCGTCTCCAATGAGGGTGACCTCTATTCGTCTCTaGATTGTTGTCATCCTACCC +
Preference number: 5 (lower is better)
Translates to: QPEISILFVCHPPSPMRVTSIRL*IVVILP
Trigger: GGGTAGGATGACAACAATCAAGAGACGAATAGAGGT...CACCCTCATTGGAGACGGGGGATGGCATACGAAAAGAATGCTGATTTCAGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp CAGCCTGAAATCAGCATTCTTTTCGTATGCCATCCCCCGTCTCCAATGAGGGTGCGGTTGTTGATGCTCTaGATTCTTGATCAAGCCTTT +
Preference number: 5 (lower is better)
Translates to: QPEISILFVCHPPSPMRVRLLML*ILDQAF
Trigger: AAAGGCTTGATCAAGAATCAAGAGCATCAACAACCG...CACCCTCATTGGAGACGGGGGATGGCATACGAAAAGAATGCTGATTTCAGGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp TCATGTTCCCTCACAACCAATGAACCAGAGGTACAAACCAGAAACCCTGACACACTCTCCTGCCCTCGGTaGTTGATGCTCTTGATTCTT +
Preference number: 5 (lower is better)
Translates to: SCSLTTNEPEVQTRNPDTLSCPR*LMLLIL
Trigger: AAGAATCAAGAGCATCAACAACCGAGGGCAGGAGAG...TGTGTCAGGGTTTCTGGTTTGTACCTCTGGTTCATTGGTTGTGAGGGAACATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp TTCCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGTTTTCTAGGTGCAGCTaGAATACTGCTTCTACCCTG +
Preference number: 5 (lower is better)
Translates to: FLGLLPNFILPTRAFPVLFSRCS*NTASTL
Trigger: CAGGGTAGAAGCAGTATTCAAGCTGCACCTAGAAAA...CAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp TTCCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGTACCTCTGGAAGAGATaGGCATTTGAATGGGTAGAC +
Preference number: 5 (lower is better)
Translates to: FLGLLPNFILPTRAFPVLYLWKR*AFEWVD
Trigger: GTCTACCCATTCAAATGCCAATCTCTTCCAGAGGTA...CAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp CAGCCTGAAATCAGCATTCTTTTCGTATGCCATCCCCCGTCTCCAATGAGGGTGATGACTGCAATGATTTaGCACTACCTATCCAAGTAT +
Preference number: 5 (lower is better)
Translates to: QPEISILFVCHPPSPMRVMTAMI*HYLSKY
Trigger: ATACTTGGATAGGTAGTGCAAAATCATTGCAGTCAT...CACCCTCATTGGAGACGGGGGATGGCATACGAAAAGAATGCTGATTTCAGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp TTCCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGGATTGTCTGCAGTCTTaGCATATACACCCAGATAGT +
Preference number: 5 (lower is better)
Translates to: FLGLLPNFILPTRAFPVLDCLQS*HIHPDS
Trigger: ACTATCTGGGTGTATATGCAAAGACTGCAGACAATC...CAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp TCATGTTCCCTCACAACCAATGAACCAGAGGTACAAACCAGAAACCCTGACACACCTCTTCCCCTCACTTaGACGATCTCAAGCAAAATT +
Preference number: 5 (lower is better)
Translates to: SCSLTTNEPEVQTRNPDTPLPLT*TISSKI
Trigger: AATTTTGCTTGAGATCGTCAAAGTGAGGGGAAGAGG...TGTGTCAGGGTTTCTGGTTTGTACCTCTGGTTCATTGGTTGTGAGGGAACATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp CCTTGGATTACTGCCAAACTTCATACTGCCAACCCGAGCATTCCCAGTCTTGATTATAACATTTCTCCTTaGCTTACTACCCTCTTCCCC +
Preference number: 5 (lower is better)
Translates to: PWITAKLHTANPSIPSLDYNISP*LTTLFP
Trigger: GGGGAAGAGGGTAGTAAGCAAAGGAGAAATGTTATA...ATCAAGACTGGGAATGCTCGGGTTGGCAGTATGAAGTTTGGCAGTAATCCAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCCGGGGTTTCACCATGTaGGCCAAGCTGGTCTCGGAC +
Preference number: 5 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTRGFTM*AKLVSD
Trigger: GTCCGAGACCAGCTTGGCCAACATGGTGAAACCCCG...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp ACAAAAGTGCTCTCCCCTTTCCTCCATAAGGAATTACAACCTGTATGTCTGCAATCCTGGTTCTCCAGCTaGCAGATGGTATTTTGTGGG +
Preference number: 5 (lower is better)
Translates to: TKVLSPFLHKELQPVCLQSWFSS*QMVFCG
Trigger: CCCACAAAATACCATCTGCAAGCTGGAGAACCAGGA...TTGCAGACATACAGGTTGTAATTCCTTATGGAGGAAAGGGGAGAGCACTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp CCAATCAGCTTTCCTGGTTCTCCAGCTTGCAGATGGTATTTTGTGGGACTTCTTCGGTTGTTGATGCTCTaGATTCTTGATCAAGCCTTT +
Preference number: 5 (lower is better)
Translates to: PISFPGSPACRWYFVGLLRLLML*ILDQAF
Trigger: AAAGGCTTGATCAAGAATCAAGAGCATCAACAACCG...AAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp TCGTCTCTTGATTGTTGTCATCCTACCCCTGGGGAATCAGTGACCACTTACATACAGGCAGGAATGTCTTaGTTTACTGCTGATGGAAAT +
Preference number: 5 (lower is better)
Translates to: SSLDCCHPTPGESVTTYIQAGMS*FTADGN
Trigger: ATTTCCATCAGCAGTAAACAAAGACATTCCTGCCTG...TATGTAAGTGGTCACTGATTCCCCAGGGGTAGGATGACAACAATCAAGAGACGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp ACAAAAGTGCTCTCCCCTTTCCTCCATAAGGAATTACAACCTGTATGTCTGCAAAAATCTGCTAGACTCTaGAGCATCAAGAGGCTGTCA +
Preference number: 5 (lower is better)
Translates to: TKVLSPFLHKELQPVCLQKSARL*SIKRLS
Trigger: TGACAGCCTCTTGATGCTCAAGAGTCTAGCAGATTT...TTGCAGACATACAGGTTGTAATTCCTTATGGAGGAAAGGGGAGAGCACTTTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp ATGACACTTTGGGGATGGGACCTAGGTCTATACAGGAAATTCATTTATGCTTCACATATACATGACACTTaGGGGATGGGACCTAGGTCT +
Preference number: 5 (lower is better)
Translates to: MTLWGWDLGLYRKFIYASHIHDT*GMGPRS
Trigger: AGACCTAGGTCCCATCCCCAAAGTGTCATGTATATG...TGAAGCATAAATGAATTTCCTGTATAGACCTAGGTCCCATCCCCAAAGTGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACACCACTGTCACTTCCTaGGATTACTGCCAAACTTCA +
Preference number: 5 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNTTVTS*DYCQTS
Trigger: TGAAGTTTGGCAGTAATCCAAGGAAGTGACAGTGGT...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp ACAAAAGTGCTCTCCCCTTTCCTCCATAAGGAATTACAACCTGTATGTCTGCAATTCTTGATCAAGCCTTaGGTCTCAGACCAGGACTTA +
Preference number: 5 (lower is better)
Translates to: TKVLSPFLHKELQPVCLQFLIKP*VSDQDL
Trigger: TAAGTCCTGGTCTGAGACCAAAGGCTTGATCAAGAA...TTGCAGACATACAGGTTGTAATTCCTTATGGAGGAAAGGGGAGAGCACTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp TCGTCTCTTGATTGTTGTCATCCTACCCCTGGGGAATCAGTGACCACTTACATAATTACACCATACCACTaGCCTATTATCAAGCAAATC +
Preference number: 5 (lower is better)
Translates to: SSLDCCHPTPGESVTTYIITPYH*PIIKQI
Trigger: GATTTGCTTGATAATAGGCAAGTGGTATGGTGTAAT...TATGTAAGTGGTCACTGATTCCCCAGGGGTAGGATGACAACAATCAAGAGACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACGATTGTCTGCAGTCTTaGCATATACACCCAGATAGT +
Preference number: 5 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNDCLQS*HIHPDS
Trigger: ACTATCTGGGTGTATATGCAAAGACTGCAGACAATC...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp ATGACACTTTGGGGATGGGACCTAGGTCTATACAGGAAATTCATTTATGCTTCATTTTCTAGGTGCAGCTaGAATACTGCTTCTACCCTG +
Preference number: 5 (lower is better)
Translates to: MTLWGWDLGLYRKFIYASFSRCS*NTASTL
Trigger: CAGGGTAGAAGCAGTATTCAAGCTGCACCTAGAAAA...TGAAGCATAAATGAATTTCCTGTATAGACCTAGGTCCCATCCCCAAAGTGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp ACAAAAGTGCTCTCCCCTTTCCTCCATAAGGAATTACAACCTGTATGTCTGCAACACAGGGTACTGGAATaGGAAGTGGAGATAATGAAA +
Preference number: 5 (lower is better)
Translates to: TKVLSPFLHKELQPVCLQHRVLE*EVEIMK
Trigger: TTTCATTATCTCCACTTCCAATTCCAGTACCCTGTG...TTGCAGACATACAGGTTGTAATTCCTTATGGAGGAAAGGGGAGAGCACTTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp TCCTTTACCCCAGTGACGCCTGAAGCTAGCTTTTGGTTAGGAAACAAATTTATTTTCTTGATCAAGCCTTaGGTCTCAGACCAGGACTTA +
Preference number: 5 (lower is better)
Translates to: SFTPVTPEASFWLGNKFIFLIKP*VSDQDL
Trigger: TAAGTCCTGGTCTGAGACCAAAGGCTTGATCAAGAA...AATAAATTTGTTTCCTAACCAAAAGCTAGCTTCAGGCGTCACTGGGGTAAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp CCAATCAGCTTTCCTGGTTCTCCAGCTTGCAGATGGTATTTTGTGGGACTTCTTAACCAGAAAAAGAAATaGGCATCATCCGAAATGTCT +
Preference number: 5 (lower is better)
Translates to: PISFPGSPACRWYFVGLLNQKKK*ASSEMS
Trigger: AGACATTTCGGATGATGCCAATTTCTTTTTCTGGTT...AAGAAGTCCCACAAAATACCATCTGCAAGCTGGAGAACCAGGAAAGCTGATTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp GAAGCATTTGAACATGCCCATCACTCCAGATTTACAAACACAAAACCTCCGAACAGAAACCCTGACACATaGTTTTCTCCCTTATTTCTG +
Preference number: 5 (lower is better)
Translates to: EAFEHAHHSRFTNTKPPNRNPDT*FSPLFL
Trigger: CAGAAATAAGGGAGAAAACAATGTGTCAGGGTTTCT...GTTCGGAGGTTTTGTGTTTGTAAATCTGGAGTGATGGGCATGTTCAAATGCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp ATCAATTATGACTGCAATGATTTTGCACTACCTATCCAAGTATGGGCAGAGAGTCCTCTTCCCCTCACTTaGACGATCTCAAGCAAAATT +
Preference number: 5 (lower is better)
Translates to: INYDCNDFALPIQVWAESPLPLT*TISSKI
Trigger: AATTTTGCTTGAGATCGTCAAAGTGAGGGGAAGAGG...ACTCTCTGCCCATACTTGGATAGGTAGTGCAAAATCATTGCAGTCATAATTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp TCCTTTACCCCAGTGACGCCTGAAGCTAGCTTTTGGTTAGGAAACAAATTTATTGTGTATGACCTTGCCTaGCTAACTCCAGAGAAATTT +
Preference number: 5 (lower is better)
Translates to: SFTPVTPEASFWLGNKFIVYDLA*LTPEKF
Trigger: AAATTTCTCTGGAGTTAGCAAGGCAAGGTCATACAC...AATAAATTTGTTTCCTAACCAAAAGCTAGCTTCAGGCGTCACTGGGGTAAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCCTCTCCTGCCCTCGGTaGTTGATGCTCTTGATTCTT +
Preference number: 5 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTLSCPR*LMLLIL
Trigger: AAGAATCAAGAGCATCAACAACCGAGGGCAGGAGAG...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCTGTAATCCCAGTACTTaGGGAGACTGGGGAGTGGAT +
Preference number: 5 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTCNPST*GDWGVD
Trigger: ATCCACTCCCCAGTCTCCCAAAGTACTGGGATTACA...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp ATCAATTATGACTGCAATGATTTTGCACTACCTATCCAAGTATGGGCAGAGAGTGTGTATGACCTTGCCTaGCTAACTCCAGAGAAATTT +
Preference number: 5 (lower is better)
Translates to: INYDCNDFALPIQVWAESVYDLA*LTPEKF
Trigger: AAATTTCTCTGGAGTTAGCAAGGCAAGGTCATACAC...ACTCTCTGCCCATACTTGGATAGGTAGTGCAAAATCATTGCAGTCATAATTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp ATGACACTTTGGGGATGGGACCTAGGTCTATACAGGAAATTCATTTATGCTTCAATGACTGCAATGATTTaGCACTACCTATCCAAGTAT +
Preference number: 5 (lower is better)
Translates to: MTLWGWDLGLYRKFIYASMTAMI*HYLSKY
Trigger: ATACTTGGATAGGTAGTGCAAAATCATTGCAGTCAT...TGAAGCATAAATGAATTTCCTGTATAGACCTAGGTCCCATCCCCAAAGTGTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp TCCTTTACCCCAGTGACGCCTGAAGCTAGCTTTTGGTTAGGAAACAAATTTATTCTAGAGATTCCAAGATaGGAATTTCCAATTTCCACT +
Preference number: 5 (lower is better)
Translates to: SFTPVTPEASFWLGNKFILEIPR*EFPIST
Trigger: AGTGGAAATTGGAAATTCCAATCTTGGAATCTCTAG...AATAAATTTGTTTCCTAACCAAAAGCTAGCTTCAGGCGTCACTGGGGTAAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp ATCAATTATGACTGCAATGATTTTGCACTACCTATCCAAGTATGGGCAGAGAGTCTAGAGATTCCAAGATaGGAATTTCCAATTTCCACT +
Preference number: 5 (lower is better)
Translates to: INYDCNDFALPIQVWAESLEIPR*EFPIST
Trigger: AGTGGAAATTGGAAATTCCAATCTTGGAATCTCTAG...ACTCTCTGCCCATACTTGGATAGGTAGTGCAAAATCATTGCAGTCATAATTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS-3UTR CAA 90 bp ATAAGAGGAAGTCAAGACTTTCTGAAAACCAAACTTCCAAATTTTGCCTATACCAACCAGAAAAAGAAATaGGCATCATCCGAAATGTCT +
Preference number: 5 (lower is better)
Translates to: IRGSQDFLKTKLPNFAYTNQKKK*ASSEMS
Trigger: AGACATTTCGGATGATGCCAATTTCTTTTTCTGGTT...GGTATAGGCAAAATTTGGAAGTTTGGTTTTCAGAAAGTCTTGACTTCCTCTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000338970.10
ENST00000396203.7
CDS GCA 72 bp GGGAAGGGCGCGAGTCCGGGAAGGGCCCGATTCCGCTaGACAGCCGGCCCGGGGACCCTCACCATGCGCTTC +
Preference number: 6 (lower is better)
Translates to: GKGASPGRARFR*TAGPGTLTMRF
Trigger: GAAGCGCATGGTGAGGGTCCCCGGGCCGGCTGTGCAGCGGAATCGGGCCCTTCCCGGACTCGCGCCCTTCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435633.5
CDS CCA 72 bp TGGGAGCCGTTTGGCGCCTCAGCTTCCCAGCGGAGGTaGAGGTCGAGCGGCATGGTCGACGGCCCCGGAGCC +
Preference number: 6 (lower is better)
Translates to: WEPFGASASQRR*RSSGMVDGPGA
Trigger: GGCTCCGGGGCCGTCGACCATGCCGCTCGACCTCCACCTCCGCTGGGAAGCTGAGGCGCCAAACGGCTCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396203.7
ENST00000416518.1
ENST00000435633.5
CDS CCA 72 bp CCTCAGCTTCCCAGCGGAGGTGGAGGTCGAGCGGCATaGTCGACGGCCCCGGAGCCCGCAACAGTAAGACTC +
Preference number: 6 (lower is better)
Translates to: PQLPSGGGGRAA*STAPEPATVRL
Trigger: GAGTCTTACTGTTGCGGGCTCCGGGGCCGTCGACCATGCCGCTCGACCTCCACCTCCGCTGGGAAGCTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396203.7
ENST00000416518.1
ENST00000435633.5
CDS CCA 72 bp ACACCATGCGCTTCCCGGGACCCTCTGGGAGCCGTTTaGCGCCTCAGCTTCCCAGCGGAGGTGGAGGTCGAG +
Preference number: 6 (lower is better)
Translates to: TPCASRDPLGAV*RLSFPAEVEVE
Trigger: CTCGACCTCCACCTCCGCTGGGAAGCTGAGGCGCCAAACGGCTCCCAGAGGGTCCCGGGAAGCGCATGGTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396203.7
ENST00000416518.1
CDS CCA 72 bp TCACCATGCGCTTCCCGGGACCCTCTGGGAGCCGTTTaGCGCCTCAGCTTCCCAGCGGAGGTGGAGGTCGAG +
Preference number: 6 (lower is better)
Translates to: SPCASRDPLGAV*RLSFPAEVEVE
Trigger: CTCGACCTCCACCTCCGCTGGGAAGCTGAGGCGCCAAACGGCTCCCAGAGGGTCCCGGGAAGCGCATGGTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435633.5
CDS CAA 72 bp ATCCTCATCTTACACAGCCATCGAGACAATTCATTATaGCCATCTGCAGGGCACATGTCCACTGCCATGTTT +
Preference number: 6 (lower is better)
Translates to: ILILHSHRDNSL*PSAGHMSTAMF
Trigger: AAACATGGCAGTGGACATGTGCCCTGCAGATGGCAATAATGAATTGTCTCGATGGCTGTGTAAGATGAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465325.1
CDS TCA 72 bp TACTTCTATGATGCAAATCCCTCTTCAGGATGGCTCTaGATCTTCCGTATTGTTTACTCCAAAACAAACTTT +
Preference number: 6 (lower is better)
Translates to: YFYDANPSSGWL*IFRIVYSKTNF
Trigger: AAAGTTTGTTTTGGAGTAAACAATACGGAAGATTCAGAGCCATCCTGAAGAGGGATTTGCATCATAGAAGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465280.1
CDS CCA 72 bp TACACAGCAGTAAATACAAAAGTGCTTTCTACGTGCTaGATCTGTTCTAAACTCACTTTACGTATAGTAACT +
Preference number: 6 (lower is better)
Translates to: YTAVNTKVLSTC*ICSKLTLRIVT
Trigger: AGTTACTATACGTAAAGTGAGTTTAGAACAGATCCAGCACGTAGAAAGCACTTTTGTATTTACTGCTGTGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465325.1
CDS GCA 72 bp AAATACACAGCAGTAAATACAAAAGTGCTTTCTACGTaGTGGATCTGTTCTAAACTCACTTTACGTATAGTA +
Preference number: 6 (lower is better)
Translates to: KYTAVNTKVLST*WICSKLTLRIV
Trigger: TACTATACGTAAAGTGAGTTTAGAACAGATCCAGCACGTAGAAAGCACTTTTGTATTTACTGCTGTGTATTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465325.1