Pregenerated sensors for RPL11 (Homo sapiens)
Ensembl gene IDs: ENSG00000142676Ensembl transcript IDs: ENST00000443624.6, ENST00000458455.2, ENST00000467075.2, ENST00000643754.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCCCTCCAAATGGGGCTACTGCACCACAGCACATCAACCAAGGTGTaGCAAGCACAGGCAATGAATGCTATGAAGCTTGGACTTGGATCT | + |
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Preference number: 1 (lower is better) Translates to: PLQMGLLHHSTSTKV*QAQAMNAMKLGLGS Trigger: AGATCCAAGTCCAAGCTTCATAGCATTCATTGCCTGTGCTTGCCACACCTTGGTTGATGTGCTGTGGTGCAGTAGCCCCATTTGGAGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| 3UTR CCA 90 bp | CAAGGTGTGGCAAGCACAGGCAATGAATGCTATGAAGCTTGGACTTaGATCTGCCAGGAAATACTGGCATCCAATCAGAGGATGACGGGG | + |
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Preference number: 1 (lower is better) Translates to: QGVASTGNECYEAWT*ICQEILASNQRMTG Trigger: CCCCGTCATCCTCTGATTGGATGCCAGTATTTCCTGGCAGATCCAAGTCCAAGCTTCATAGCATTCATTGCCTGTGCTTGCCACACCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| 3UTR CCA 90 bp | GAGGATGACGGGGTTGTTACCAGCTACTCCCATCGAAGCTTTAAGTaGCTTGAGGTCCAAGGACTTGAATATGGCCAGGATCCTTTCACA | + |
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Preference number: 1 (lower is better) Translates to: EDDGVVTSYSHRSFK*LEVQGLEYGQDPFT Trigger: TGTGAAAGGATCCTGGCCATATTCAAGTCCTTGGACCTCAAGCCACTTAAAGCTTCGATGGGAGTAGCTGGTAACAACCCCGTCATCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| 3UTR GCA 90 bp | GTGGCAAGCACAGGCAATGAATGCTATGAAGCTTGGACTTGGATCTaGCAGGAAATACTGGCATCCAATCAGAGGATGACGGGGTTGTTA | + |
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Preference number: 1 (lower is better) Translates to: VASTGNECYEAWTWI*QEILASNQRMTGLL Trigger: TAACAACCCCGTCATCCTCTGATTGGATGCCAGTATTTCCTGGCAGATCCAAGTCCAAGCTTCATAGCATTCATTGCCTGTGCTTGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| 3UTR CCA 90 bp | ATCAACCAAGGTGTGGCAAGCACAGGCAATGAATGCTATGAAGCTTaGACTTGGATCTGCCAGGAAATACTGGCATCCAATCAGAGGATG | + |
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Preference number: 1 (lower is better) Translates to: INQGVASTGNECYEA*TWICQEILASNQRM Trigger: CATCCTCTGATTGGATGCCAGTATTTCCTGGCAGATCCAAGTCCAAGCTTCATAGCATTCATTGCCTGTGCTTGCCACACCTTGGTTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| 3UTR TCA 90 bp | CTAAATTTAATCTCAACCATCACACCAAAGCCTGTCATTCCTTCATaGCGCATCAATGCTGATAAAATTTCTAGTACAGAACAGAATCAC | + |
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Preference number: 1 (lower is better) Translates to: LNLISTITPKPVIPS*RINADKISSTEQNH Trigger: GTGATTCTGTTCTGTACTAGAAATTTTATCAGCATTGATGCGTCATGAAGGAATGACAGGCTTTGGTGTGATGGTTGAGATTAAATTTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| 3UTR CAA 90 bp | TGGATCTGCCAGGAAATACTGGCATCCAATCAGAGGATGACGGGGTaGTTACCAGCTACTCCCATCGAAGCTTTAAGTGGCTTGAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: WICQEILASNQRMTG*LPATPIEALSGLRS Trigger: GGACCTCAAGCCACTTAAAGCTTCGATGGGAGTAGCTGGTAACAACCCCGTCATCCTCTGATTGGATGCCAGTATTTCCTGGCAGATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| 3UTR CAA 90 bp | ATGACGGGGTTGTTACCAGCTACTCCCATCGAAGCTTTAAGTGGCTaGAGGTCCAAGGACTTGAATATGGCCAGGATCCTTTCACAGAAC | + |
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Preference number: 2 (lower is better) Translates to: MTGLLPATPIEALSG*RSKDLNMARILSQN Trigger: GTTCTGTGAAAGGATCCTGGCCATATTCAAGTCCTTGGACCTCAAGCCACTTAAAGCTTCGATGGGAGTAGCTGGTAACAACCCCGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| 3UTR CAA 90 bp | CCAGCTACTCCCATCGAAGCTTTAAGTGGCTTGAGGTCCAAGGACTaGAATATGGCCAGGATCCTTTCACAGAACACACAACAGAATTGC | + |
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Preference number: 2 (lower is better) Translates to: PATPIEALSGLRSKD*NMARILSQNTQQNC Trigger: GCAATTCTGTTGTGTGTTCTGTGAAAGGATCCTGGCCATATTCAAGTCCTTGGACCTCAAGCCACTTAAAGCTTCGATGGGAGTAGCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTCATTCCTTCATGACGCATCAATGCTGATAAAATTTCTAGTACAGAACAGAAGCACAGGCAATGAATaGTATGAAGCTTGGACTTGG | + |
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Preference number: 2 (lower is better) Translates to: LSFLHDASMLIKFLVQNRSTGNE*YEAWTW Trigger: CCAAGTCCAAGCTTCATAGCATTCATTGCCTGTGCT...TCTGTTCTGTACTAGAAATTTTATCAGCATTGATGCGTCATGAAGGAATGACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| 3UTR GCA 72 bp | GCAGGGGGCCTCCTGGAACACAGGAGCACTGCACCCTaGTTAACCAAGGCTCTAAATTCAAACCCCAACATC | + |
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Preference number: 3 (lower is better) Translates to: AGGLLEHRSTAP*LTKALNSNPNI Trigger: GATGTTGGGGTTTGAATTTAGAGCCTTGGTTAAGCAGGGTGCAGTGCTCCTGTGTTCCAGGAGGCCCCCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| 3UTR CCA 72 bp | TCAAACCCCAACATCAACCAAACCCTCCCCTCCAAATaGGGCTACTGCACCACAGCACATCAACCAAGGTGT | + |
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Preference number: 3 (lower is better) Translates to: SNPNINQTLPSK*GYCTTAHQPRC Trigger: ACACCTTGGTTGATGTGCTGTGGTGCAGTAGCCCCATTTGGAGGGGAGGGTTTGGTTGATGTTGGGGTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| 3UTR TCA 72 bp | GGATCTGCCAGGAAATACTGGCATCCAATCAGAGGATaGCGGGGTTGTTACCAGCTACTCCCATCGAAGCTT | + |
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Preference number: 3 (lower is better) Translates to: GSARKYWHPIRG*RGCYQLLPSKL Trigger: AAGCTTCGATGGGAGTAGCTGGTAACAACCCCGTCATCCTCTGATTGGATGCCAGTATTTCCTGGCAGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| 3UTR CCA 72 bp | ATGGGGCTACTGCACCACAGCACATCAACCAAGGTGTaGCAAGCACAGGCAATGAATGCTATGAAGCTTGGA | + |
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Preference number: 3 (lower is better) Translates to: MGLLHHSTSTKV*QAQAMNAMKLG Trigger: TCCAAGCTTCATAGCATTCATTGCCTGTGCTTGCCACACCTTGGTTGATGTGCTGTGGTGCAGTAGCCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| 3UTR CCA 72 bp | GGGGTTGTTACCAGCTACTCCCATCGAAGCTTTAAGTaGCTTGAGGTCCAAGGACTTGAATATGGCCAGGAT | + |
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Preference number: 3 (lower is better) Translates to: GVVTSYSHRSFK*LEVQGLEYGQD Trigger: ATCCTGGCCATATTCAAGTCCTTGGACCTCAAGCCACTTAAAGCTTCGATGGGAGTAGCTGGTAACAACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| 3UTR CCA 72 bp | GCAAGCACAGGCAATGAATGCTATGAAGCTTGGACTTaGATCTGCCAGGAAATACTGGCATCCAATCAGAGG | + |
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Preference number: 3 (lower is better) Translates to: ASTGNECYEAWT*ICQEILASNQR Trigger: CCTCTGATTGGATGCCAGTATTTCCTGGCAGATCCAAGTCCAAGCTTCATAGCATTCATTGCCTGTGCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| 3UTR-3UTR CAA 90 bp | ACATCAACCAAGGTGTGGCAAGCACAGGCAATGAATGCTATGAAGCTTGGACTTTTGAGGTCCAAGGACTaGAATATGGCCAGGATCCTT | + |
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Preference number: 3 (lower is better) Translates to: TSTKVWQAQAMNAMKLGLLRSKD*NMARIL Trigger: AAGGATCCTGGCCATATTCAAGTCCTTGGACCTCAA...AAGTCCAAGCTTCATAGCATTCATTGCCTGTGCTTGCCACACCTTGGTTGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| 3UTR GCA 72 bp | ACAGGCAATGAATGCTATGAAGCTTGGACTTGGATCTaGCAGGAAATACTGGCATCCAATCAGAGGATGACG | + |
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Preference number: 3 (lower is better) Translates to: TGNECYEAWTWI*QEILASNQRMT Trigger: CGTCATCCTCTGATTGGATGCCAGTATTTCCTGGCAGATCCAAGTCCAAGCTTCATAGCATTCATTGCCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| 3UTR GCA 72 bp | CACATCAACCAAGGTGTGGCAAGCACAGGCAATGAATaGTATGAAGCTTGGACTTGGATCTGCCAGGAAATA | + |
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Preference number: 3 (lower is better) Translates to: HINQGVASTGNE*YEAWTWICQEI Trigger: TATTTCCTGGCAGATCCAAGTCCAAGCTTCATAGCATTCATTGCCTGTGCTTGCCACACCTTGGTTGATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| 3UTR-3UTR CAA 90 bp | ACATCAACCAAGGTGTGGCAAGCACAGGCAATGAATGCTATGAAGCTTGGACTTGAACACACAACAGAATaGCACATTTCACTGAAAACT | + |
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Preference number: 3 (lower is better) Translates to: TSTKVWQAQAMNAMKLGLEHTTE*HISLKT Trigger: AGTTTTCAGTGAAATGTGCAATTCTGTTGTGTGTTC...AAGTCCAAGCTTCATAGCATTCATTGCCTGTGCTTGCCACACCTTGGTTGATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| CDS-3UTR GCA 90 bp | CCCGGAGCCGCTCCTAAAACGATGGCAGGGAAAGTGACAGAATTCAACCCTGCGCCCGCAGGCTCGGCCTaGCATGGATGGCGACGGATA | + |
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Preference number: 4 (lower is better) Translates to: PGAAPKTMAGKVTEFNPAPAGSA*HGWRRI Trigger: TATCCGTCGCCATCCATGGCAGGCCGAGCCTGCGGG...CGCAGGGTTGAATTCTGTCACTTTCCCTGCCATCGTTTTAGGAGCGGCTCCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS-3UTR TCA 90 bp | CCCGGAGCCGCTCCTAAAACGATGGCAGGGAAAGTGACAGAATTCAACCCTGCGGATCCTGCGTGCTTCTaGGCACTCCGGGCAAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: PGAAPKTMAGKVTEFNPADPACF*ALRASA Trigger: GGCACTTGCCCGGAGTGCTCAGAAGCACGCAGGATC...CGCAGGGTTGAATTCTGTCACTTTCCCTGCCATCGTTTTAGGAGCGGCTCCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS-3UTR GCA 90 bp | GATGGCAGGGAAAGTGACAGAATTCAACCCTGCGTCCTTGGCTCGAACGGCTCTCCATATTCCTCGGGCTaGGGGCGAAGTAGCCCCCGC | + |
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Preference number: 4 (lower is better) Translates to: DGRESDRIQPCVLGSNGSPYSSG*GRSSPR Trigger: GCGGGGGCTACTTCGCCCGCAGCCCGAGGAATATGG...AGAGCCGTTCGAGCCAAGGACGCAGGGTTGAATTCTGTCACTTTCCCTGCCATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS-3UTR GCA 90 bp | GATGGCAGGGAAAGTGACAGAATTCAACCCTGCGTCCTTGGCTCGAACGGCTCTTGGGCCAGCAGGCATTaGGGGCTCCATATTCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: DGRESDRIQPCVLGSNGSWASRH*GLHIPR Trigger: CCGAGGAATATGGAGCCCGCAATGCCTGCTGGCCCA...AGAGCCGTTCGAGCCAAGGACGCAGGGTTGAATTCTGTCACTTTCCCTGCCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS-3UTR GCA 90 bp | GATGGCAGGGAAAGTGACAGAATTCAACCCTGCGTCCTTGGCTCGAACGGCTCTAGCACTCCGGGCAAGTaGCCGGAGCCGCTCCTAAAA | + |
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Preference number: 4 (lower is better) Translates to: DGRESDRIQPCVLGSNGSSTPGK*PEPLLK Trigger: TTTTAGGAGCGGCTCCGGGCACTTGCCCGGAGTGCT...AGAGCCGTTCGAGCCAAGGACGCAGGGTTGAATTCTGTCACTTTCCCTGCCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS-3UTR GCA 90 bp | CCCGGAGCCGCTCCTAAAACGATGGCAGGGAAAGTGACAGAATTCAACCCTGCGGACAGAGTTTGCGGATaGGAAGTTCCCGCATGGGGT | + |
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Preference number: 4 (lower is better) Translates to: PGAAPKTMAGKVTEFNPADRVCG*EVPAWG Trigger: ACCCCATGCGGGAACTTCGCATCCGCAAACTCTGTC...CGCAGGGTTGAATTCTGTCACTTTCCCTGCCATCGTTTTAGGAGCGGCTCCGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS-3UTR CCA 90 bp | GATGGCAGGGAAAGTGACAGAATTCAACCCTGCGTCCTTGGCTCGAACGGCTCTAGGCTCGGCCTGCCATaGATGGCGACGGATAAAGGA | + |
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Preference number: 4 (lower is better) Translates to: DGRESDRIQPCVLGSNGSRLGLP*MATDKG Trigger: TCCTTTATCCGTCGCCATCCATGGCAGGCCGAGCCT...AGAGCCGTTCGAGCCAAGGACGCAGGGTTGAATTCTGTCACTTTCCCTGCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS-3UTR GCA 90 bp | GATGGCAGGGAAAGTGACAGAATTCAACCCTGCGTCCTTGGCTCGAACGGCTCTGACAGAATTCAACCCTaGGTCCTTGGCTCGAACGGC | + |
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Preference number: 4 (lower is better) Translates to: DGRESDRIQPCVLGSNGSDRIQP*VLGSNG Trigger: GCCGTTCGAGCCAAGGACGCAGGGTTGAATTCTGTC...AGAGCCGTTCGAGCCAAGGACGCAGGGTTGAATTCTGTCACTTTCCCTGCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS-3UTR CCA 90 bp | GATGGCAGGGAAAGTGACAGAATTCAACCCTGCGTCCTTGGCTCGAACGGCTCTTCGGCCTGCCATGGATaGCGACGGATAAAGGAAAGC | + |
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Preference number: 4 (lower is better) Translates to: DGRESDRIQPCVLGSNGSSACHG*RRIKES Trigger: GCTTTCCTTTATCCGTCGCCATCCATGGCAGGCCGA...AGAGCCGTTCGAGCCAAGGACGCAGGGTTGAATTCTGTCACTTTCCCTGCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS-3UTR TCA 90 bp | GATGGCAGGGAAAGTGACAGAATTCAACCCTGCGTCCTTGGCTCGAACGGCTCTCCCCAACACAGATGTTaGGACAGAGTTTGCGGATGC | + |
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Preference number: 4 (lower is better) Translates to: DGRESDRIQPCVLGSNGSPQHRC*DRVCGC Trigger: GCATCCGCAAACTCTGTCTCAACATCTGTGTTGGGG...AGAGCCGTTCGAGCCAAGGACGCAGGGTTGAATTCTGTCACTTTCCCTGCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS-3UTR TCA 90 bp | GATGGCAGGGAAAGTGACAGAATTCAACCCTGCGTCCTTGGCTCGAACGGCTCTCGATGGCAGGGAAAGTaGCAGAATTCAACCCTGCGT | + |
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Preference number: 4 (lower is better) Translates to: DGRESDRIQPCVLGSNGSRWQGK*QNSTLR Trigger: ACGCAGGGTTGAATTCTGTCACTTTCCCTGCCATCG...AGAGCCGTTCGAGCCAAGGACGCAGGGTTGAATTCTGTCACTTTCCCTGCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS-3UTR TCA 90 bp | CCCGGAGCCGCTCCTAAAACGATGGCAGGGAAAGTGACAGAATTCAACCCTGCGTTCTCCTTTTCACCTTaGTCCTGCGTGCTTCTGAGC | + |
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Preference number: 4 (lower is better) Translates to: PGAAPKTMAGKVTEFNPAFSFSP*SCVLLS Trigger: GCTCAGAAGCACGCAGGATCAAGGTGAAAAGGAGAA...CGCAGGGTTGAATTCTGTCACTTTCCCTGCCATCGTTTTAGGAGCGGCTCCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS-3UTR GCA 90 bp | CAGAGGATGACGGGGTTGTTACCAGCTACTCCCATCGAAGCTTTAAGTGGCTTGGACAGAGTTTGCGGATaGGAAGTTCCCGCATGGGGT | + |
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Preference number: 4 (lower is better) Translates to: QRMTGLLPATPIEALSGLDRVCG*EVPAWG Trigger: ACCCCATGCGGGAACTTCGCATCCGCAAACTCTGTC...CAAGCCACTTAAAGCTTCGATGGGAGTAGCTGGTAACAACCCCGTCATCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| CDS-3UTR GCA 90 bp | GTGGCAAGCACAGGCAATGAATGCTATGAAGCTTGGACTTGGATCTGCCAGGAAGGAACACAGGAGCACTaGACCCTGCTTAACCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: VASTGNECYEAWTWICQEGTQEH*TLLNQG Trigger: GCCTTGGTTAAGCAGGGTGCAGTGCTCCTGTGTTCC...TTCCTGGCAGATCCAAGTCCAAGCTTCATAGCATTCATTGCCTGTGCTTGCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| CDS-3UTR GCA 90 bp | AACATCAACCAAACCCTCCCCTCCAAATGGGGCTACTGCACCACAGCACATCAATCCAAATGGGGCTACTaGACCACAGCACATCAACCA | + |
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Preference number: 4 (lower is better) Translates to: NINQTLPSKWGYCTTAHQSKWGY*TTAHQP Trigger: TGGTTGATGTGCTGTGGTGCAGTAGCCCCATTTGGA...TTGATGTGCTGTGGTGCAGTAGCCCCATTTGGAGGGGAGGGTTTGGTTGATGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| CDS-3UTR GCA 90 bp | AATACTGGCATCCAATCAGAGGATGACGGGGTTGTTACCAGCTACTCCCATCGAGCTTGGACTTGGATCTaGCAGGAAATACTGGCATCC | + |
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Preference number: 4 (lower is better) Translates to: NTGIQSEDDGVVTSYSHRAWTWI*QEILAS Trigger: GGATGCCAGTATTTCCTGGCAGATCCAAGTCCAAGC...TCGATGGGAGTAGCTGGTAACAACCCCGTCATCCTCTGATTGGATGCCAGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| 3UTR CAA 72 bp | CAGGAAATACTGGCATCCAATCAGAGGATGACGGGGTaGTTACCAGCTACTCCCATCGAAGCTTTAAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: QEILASNQRMTG*LPATPIEALSG Trigger: GCCACTTAAAGCTTCGATGGGAGTAGCTGGTAACAACCCCGTCATCCTCTGATTGGATGCCAGTATTTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| CDS-3UTR TCA 90 bp | GCAATGAATGCTATGAAGCTTGGACTTGGATCTGCCAGGAAATACTGGCATCCACCCCAACACAGATGTTaGGACAGAGTTTGCGGATGC | + |
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Preference number: 4 (lower is better) Translates to: AMNAMKLGLGSARKYWHPPQHRC*DRVCGC Trigger: GCATCCGCAAACTCTGTCTCAACATCTGTGTTGGGG...TGGATGCCAGTATTTCCTGGCAGATCCAAGTCCAAGCTTCATAGCATTCATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| CDS-3UTR TCA 90 bp | CACATCAACCAAGGTGTGGCAAGCACAGGCAATGAATGCTATGAAGCTTGGACTCATCCAATCAGAGGATaGCGGGGTTGTTACCAGCTA | + |
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Preference number: 4 (lower is better) Translates to: HINQGVASTGNECYEAWTHPIRG*RGCYQL Trigger: TAGCTGGTAACAACCCCGTCATCCTCTGATTGGATG...AGTCCAAGCTTCATAGCATTCATTGCCTGTGCTTGCCACACCTTGGTTGATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| CDS-3UTR TCA 90 bp | TTACCAGCTACTCCCATCGAAGCTTTAAGTGGCTTGAGGTCCAAGGACTTGAATACAGAACAGAATCACTaGATAGCAGGGGGCCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LPATPIEALSGLRSKDLNTEQNH*IAGGLL Trigger: CAGGAGGCCCCCTGCTATTCAGTGATTCTGTTCTGT...ATTCAAGTCCTTGGACCTCAAGCCACTTAAAGCTTCGATGGGAGTAGCTGGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| CDS-3UTR GCA 90 bp | CAGAGGATGACGGGGTTGTTACCAGCTACTCCCATCGAAGCTTTAAGTGGCTTGAGCACAGGCAATGAATaGTATGAAGCTTGGACTTGG | + |
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Preference number: 4 (lower is better) Translates to: QRMTGLLPATPIEALSGLSTGNE*YEAWTW Trigger: CCAAGTCCAAGCTTCATAGCATTCATTGCCTGTGCT...CAAGCCACTTAAAGCTTCGATGGGAGTAGCTGGTAACAACCCCGTCATCCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| CDS-3UTR GCA 90 bp | AATACTGGCATCCAATCAGAGGATGACGGGGTTGTTACCAGCTACTCCCATCGAAGGAGCACTGCACCCTaGTTAACCAAGGCTCTAAAT | + |
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Preference number: 4 (lower is better) Translates to: NTGIQSEDDGVVTSYSHRRSTAP*LTKALN Trigger: ATTTAGAGCCTTGGTTAAGCAGGGTGCAGTGCTCCT...TCGATGGGAGTAGCTGGTAACAACCCCGTCATCCTCTGATTGGATGCCAGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| CDS-3UTR CCA 90 bp | CAGAGGATGACGGGGTTGTTACCAGCTACTCCCATCGAAGCTTTAAGTGGCTTGGAATGCTATGAAGCTTaGACTTGGATCTGCCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: QRMTGLLPATPIEALSGLECYEA*TWICQE Trigger: TTCCTGGCAGATCCAAGTCCAAGCTTCATAGCATTC...CAAGCCACTTAAAGCTTCGATGGGAGTAGCTGGTAACAACCCCGTCATCCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| CDS-3UTR CCA 90 bp | CAGAGGATGACGGGGTTGTTACCAGCTACTCCCATCGAAGCTTTAAGTGGCTTGTATGAAGCTTGGACTTaGATCTGCCAGGAAATACTG | + |
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Preference number: 4 (lower is better) Translates to: QRMTGLLPATPIEALSGLYEAWT*ICQEIL Trigger: CAGTATTTCCTGGCAGATCCAAGTCCAAGCTTCATA...CAAGCCACTTAAAGCTTCGATGGGAGTAGCTGGTAACAACCCCGTCATCCTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| CDS-3UTR CCA 90 bp | GTTACCAGCTACTCCCATCGAAGCTTTAAGTGGCTTGAGGTCCAAGGACTTGAACATCGAAGCTTTAAGTaGCTTGAGGTCCAAGGACTT | + |
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Preference number: 4 (lower is better) Translates to: VTSYSHRSFKWLEVQGLEHRSFK*LEVQGL Trigger: AAGTCCTTGGACCTCAAGCCACTTAAAGCTTCGATG...TTCAAGTCCTTGGACCTCAAGCCACTTAAAGCTTCGATGGGAGTAGCTGGTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| 3UTR CAA 72 bp | CCCATCGAAGCTTTAAGTGGCTTGAGGTCCAAGGACTaGAATATGGCCAGGATCCTTTCACAGAACACACAA | + |
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Preference number: 4 (lower is better) Translates to: PIEALSGLRSKD*NMARILSQNTQ Trigger: TTGTGTGTTCTGTGAAAGGATCCTGGCCATATTCAAGTCCTTGGACCTCAAGCCACTTAAAGCTTCGATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| 3UTR CAA 72 bp | TTGTTACCAGCTACTCCCATCGAAGCTTTAAGTGGCTaGAGGTCCAAGGACTTGAATATGGCCAGGATCCTT | + |
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Preference number: 4 (lower is better) Translates to: LLPATPIEALSG*RSKDLNMARIL Trigger: AAGGATCCTGGCCATATTCAAGTCCTTGGACCTCAAGCCACTTAAAGCTTCGATGGGAGTAGCTGGTAACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| CDS-3UTR CCA 90 bp | CTGTCATTCCTTCATGACGCATCAATGCTGATAAAATTTCTAGTACAGAACAGAACCCTCCCCTCCAAATaGGGCTACTGCACCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: LSFLHDASMLIKFLVQNRTLPSK*GYCTTA Trigger: TGCTGTGGTGCAGTAGCCCCATTTGGAGGGGAGGGT...TCTGTTCTGTACTAGAAATTTTATCAGCATTGATGCGTCATGAAGGAATGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| CDS-3UTR CCA 90 bp | TCATTCCTTCATGACGCATCAATGCTGATAAAATTTCTAGTACAGAACAGAATCACATCAACCAAGGTGTaGCAAGCACAGGCAATGAAT | + |
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Preference number: 4 (lower is better) Translates to: SFLHDASMLIKFLVQNRITSTKV*QAQAMN Trigger: ATTCATTGCCTGTGCTTGCCACACCTTGGTTGATGT...GATTCTGTTCTGTACTAGAAATTTTATCAGCATTGATGCGTCATGAAGGAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| CDS-3UTR TCA 90 bp | TCATTCCTTCATGACGCATCAATGCTGATAAAATTTCTAGTACAGAACAGAATCCCTGTCATTCCTTCATaGCGCATCAATGCTGATAAA | + |
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Preference number: 4 (lower is better) Translates to: SFLHDASMLIKFLVQNRIPVIPS*RINADK Trigger: TTTATCAGCATTGATGCGTCATGAAGGAATGACAGG...GATTCTGTTCTGTACTAGAAATTTTATCAGCATTGATGCGTCATGAAGGAATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| CDS CCA 90 bp | CGGGCTGCGGGCGAAGTAGCCCCCGCAGGCTCGGCCTGCCATGGATaGCGACGGATAAAGGAAAGCAAATCCAGGTCCCAGCTACTCACC | + |
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Preference number: 5 (lower is better) Translates to: RAAGEVAPAGSACHG*RRIKESKSRSQLLT Trigger: GGTGAGTAGCTGGGACCTGGATTTGCTTTCCTTTATCCGTCGCCATCCATGGCAGGCCGAGCCTGCGGGGGCTACTTCGCCCGCAGCCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS CCA 90 bp | TCCTCGGGCTGCGGGCGAAGTAGCCCCCGCAGGCTCGGCCTGCCATaGATGGCGACGGATAAAGGAAAGCAAATCCAGGTCCCAGCTACT | + |
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Preference number: 5 (lower is better) Translates to: SSGCGRSSPRRLGLP*MATDKGKQIQVPAT Trigger: AGTAGCTGGGACCTGGATTTGCTTTCCTTTATCCGTCGCCATCCATGGCAGGCCGAGCCTGCGGGGGCTACTTCGCCCGCAGCCCGAGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS GCA 90 bp | CATATTCCTCGGGCTGCGGGCGAAGTAGCCCCCGCAGGCTCGGCCTaGCATGGATGGCGACGGATAAAGGAAAGCAAATCCAGGTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: HIPRAAGEVAPAGSA*HGWRRIKESKSRSQ Trigger: CTGGGACCTGGATTTGCTTTCCTTTATCCGTCGCCATCCATGGCAGGCCGAGCCTGCGGGGGCTACTTCGCCCGCAGCCCGAGGAATATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS-3UTR CAA 90 bp | CCCGGAGCCGCTCCTAAAACGATGGCAGGGAAAGTGACAGAATTCAACCCTGCGTTGGGCCAGCAGGCATaGCGGGCTCCATATTCCTCG | + |
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Preference number: 5 (lower is better) Translates to: PGAAPKTMAGKVTEFNPALGQQA*RAPYSS Trigger: CGAGGAATATGGAGCCCGCAATGCCTGCTGGCCCAA...CGCAGGGTTGAATTCTGTCACTTTCCCTGCCATCGTTTTAGGAGCGGCTCCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS-3UTR CAA 90 bp | GATGGCAGGGAAAGTGACAGAATTCAACCCTGCGTCCTTGGCTCGAACGGCTCTACGGCTCTGCTAGTTTaGGGCCAGCAGGCATTGCGG | + |
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Preference number: 5 (lower is better) Translates to: DGRESDRIQPCVLGSNGSTALLV*GQQALR Trigger: CCGCAATGCCTGCTGGCCCAAAACTAGCAGAGCCGT...AGAGCCGTTCGAGCCAAGGACGCAGGGTTGAATTCTGTCACTTTCCCTGCCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS-3UTR CAA 90 bp | CCCGGAGCCGCTCCTAAAACGATGGCAGGGAAAGTGACAGAATTCAACCCTGCGTTCAACCCTGCGTCCTaGGCTCGAACGGCTCTGCTA | + |
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Preference number: 5 (lower is better) Translates to: PGAAPKTMAGKVTEFNPAFNPAS*ARTALL Trigger: TAGCAGAGCCGTTCGAGCCAAGGACGCAGGGTTGAA...CGCAGGGTTGAATTCTGTCACTTTCCCTGCCATCGTTTTAGGAGCGGCTCCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS-3UTR CAA 90 bp | GATGGCAGGGAAAGTGACAGAATTCAACCCTGCGTCCTTGGCTCGAACGGCTCTATGTTGAGACAGAGTTaGCGGATGCGAAGTTCCCGC | + |
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Preference number: 5 (lower is better) Translates to: DGRESDRIQPCVLGSNGSMLRQS*RMRSSR Trigger: GCGGGAACTTCGCATCCGCAAACTCTGTCTCAACAT...AGAGCCGTTCGAGCCAAGGACGCAGGGTTGAATTCTGTCACTTTCCCTGCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS-3UTR CAA 90 bp | CCCGGAGCCGCTCCTAAAACGATGGCAGGGAAAGTGACAGAATTCAACCCTGCGGTTCTCCTTTTCACCTaGATCCTGCGTGCTTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: PGAAPKTMAGKVTEFNPAVLLFT*ILRASE Trigger: CTCAGAAGCACGCAGGATCAAGGTGAAAAGGAGAAC...CGCAGGGTTGAATTCTGTCACTTTCCCTGCCATCGTTTTAGGAGCGGCTCCGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS CCA 90 bp | GGGGAGAACAGCCTCAGTGCAGCCAACCAACCCATAGGCCAAATGTaGCACCAATACTGCCTCTCTCCAAAGTTTCAAATCACTGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: GENSLSAANQPIGQM*HQYCLSPKFQITGW Trigger: CCAGCCAGTGATTTGAAACTTTGGAGAGAGGCAGTATTGGTGCCACATTTGGCCTATGGGTTGGTTGGCTGCACTGAGGCTGTTCTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443624.6 |
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| CDS TCA 90 bp | TCAAAGAGTCACTTGGCAGCCCAATGGATTCTGGAGCAAGACCCATaGTCTGTGTCTGACAAAGCTGCCACCAGCATCCCACGCAACACA | + |
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Preference number: 5 (lower is better) Translates to: SKSHLAAQWILEQDP*SVSDKAATSIPRNT Trigger: TGTGTTGCGTGGGATGCTGGTGGCAGCTTTGTCAGACACAGATCATGGGTCTTGCTCCAGAATCCATTGGGCTGCCAAGTGACTCTTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443624.6 |
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| CDS GCA 90 bp | GGCTGGAGGGAACAGTTTCCTTCATCCACCTTTAAGCCATGTGGGTaGTTTACAGATCCTCGACTGCAAGTTCCCCAACAGCAGGGATCT | + |
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Preference number: 5 (lower is better) Translates to: GWREQFPSSTFKPCG*FTDPRLQVPQQQGS Trigger: AGATCCCTGCTGTTGGGGAACTTGCAGTCGAGGATCTGTAAAGCACCCACATGGCTTAAAGGTGGATGAAGGAAACTGTTCCCTCCAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443624.6 |
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| CDS-3UTR CAA 90 bp | AACATCAACCAAACCCTCCCCTCCAAATGGGGCTACTGCACCACAGCACATCAAATGTTGAGACAGAGTTaGCGGATGCGAAGTTCCCGC | + |
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Preference number: 5 (lower is better) Translates to: NINQTLPSKWGYCTTAHQMLRQS*RMRSSR Trigger: GCGGGAACTTCGCATCCGCAAACTCTGTCTCAACAT...TTGATGTGCTGTGGTGCAGTAGCCCCATTTGGAGGGGAGGGTTTGGTTGATGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| CDS GCA 90 bp | CTTCATCCACCTTTAAGCCATGTGGGTGCTTTACAGATCCTCGACTaGAAGTTCCCCAACAGCAGGGATCTTGTCCACCTTGTTCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: LHPPLSHVGALQILD*KFPNSRDLVHLVQS Trigger: GCTCTGAACAAGGTGGACAAGATCCCTGCTGTTGGGGAACTTGCAGTCGAGGATCTGTAAAGCACCCACATGGCTTAAAGGTGGATGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443624.6 |
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| CDS-3UTR CAA 90 bp | GTTGTTACCAGCTACTCCCATCGAAGCTTTAAGTGGCTTGAGGTCCAAGGACTTCAGAGGATGACGGGGTaGTTACCAGCTACTCCCATC | + |
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Preference number: 5 (lower is better) Translates to: VVTSYSHRSFKWLEVQGLQRMTG*LPATPI Trigger: GATGGGAGTAGCTGGTAACAACCCCGTCATCCTCTG...AAGTCCTTGGACCTCAAGCCACTTAAAGCTTCGATGGGAGTAGCTGGTAACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| CDS GCA 90 bp | CTCAGTGCAGCCAACCAACCCATAGGCCAAATGTGGCACCAATACTaGCTCTCTCCAAAGTTTCAAATCACTGGCTGGAGGGAACAGTTT | + |
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Preference number: 5 (lower is better) Translates to: LSAANQPIGQMWHQY*LSPKFQITGWREQF Trigger: AAACTGTTCCCTCCAGCCAGTGATTTGAAACTTTGGAGAGAGGCAGTATTGGTGCCACATTTGGCCTATGGGTTGGTTGGCTGCACTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443624.6 |
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| CDS CCA 90 bp | ATGTGGCACCAATACTGCCTCTCTCCAAAGTTTCAAATCACTGGCTaGAGGGAACAGTTTCCTTCATCCACCTTTAAGCCATGTGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: MWHQYCLSPKFQITG*REQFPSSTFKPCGC Trigger: GCACCCACATGGCTTAAAGGTGGATGAAGGAAACTGTTCCCTCCAGCCAGTGATTTGAAACTTTGGAGAGAGGCAGTATTGGTGCCACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443624.6 |
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| CDS CCA 90 bp | TTACAGACAGATCTTCAAAGAGTCACTTGGCAGCCCAATGGATTCTaGAGCAAGACCCATGATCTGTGTCTGACAAAGCTGCCACCAGCA | + |
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Preference number: 5 (lower is better) Translates to: LQTDLQRVTWQPNGF*SKTHDLCLTKLPPA Trigger: TGCTGGTGGCAGCTTTGTCAGACACAGATCATGGGTCTTGCTCCAGAATCCATTGGGCTGCCAAGTGACTCTTTGAAGATCTGTCTGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443624.6 |
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| CDS TCA 90 bp | AAGAAGACAGCTCGGAACCTATCCTTCCTCCACGAACGGAACGGGTaGAGAGAAAACTCAGGACAGTTATTGAGTGTTAAAAGATACGGA | + |
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Preference number: 5 (lower is better) Translates to: KKTARNLSFLHERNG*RENSGQLLSVKRYG Trigger: TCCGTATCTTTTAACACTCAATAACTGTCCTGAGTTTTCTCTTCACCCGTTCCGTTCGTGGAGGAAGGATAGGTTCCGAGCTGTCTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000458455.2 |
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| CDS-3UTR CAA 90 bp | ACATCAACCAAGGTGTGGCAAGCACAGGCAATGAATGCTATGAAGCTTGGACTTGAAGCTTTAAGTGGCTaGAGGTCCAAGGACTTGAAT | + |
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Preference number: 5 (lower is better) Translates to: TSTKVWQAQAMNAMKLGLEALSG*RSKDLN Trigger: ATTCAAGTCCTTGGACCTCAAGCCACTTAAAGCTTC...AAGTCCAAGCTTCATAGCATTCATTGCCTGTGCTTGCCACACCTTGGTTGATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| CDS CCA 90 bp | AGGAATAACCAACAGTCACCTAGCCAGCTCAGAGTCAAGAGCAGATaGACAAGACTCACACATTACAGACAGATCTTCAAAGAGTCACTT | + |
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Preference number: 5 (lower is better) Translates to: RNNQQSPSQLRVKSR*TRLTHYRQIFKESL Trigger: AAGTGACTCTTTGAAGATCTGTCTGTAATGTGTGAGTCTTGTCCATCTGCTCTTGACTCTGAGCTGGCTAGGTGACTGTTGGTTATTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443624.6 |
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| CDS GCA 90 bp | TTCCCCAAGGGGGAGGAGAACACAAAGGCAGACAATATTCAAAGCTaGAACTCAACATGTGAACACCAACATACCACATATGAAATAAAG | + |
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Preference number: 5 (lower is better) Translates to: FPKGEENTKADNIQS*NSTCEHQHTTYEIK Trigger: CTTTATTTCATATGTGGTATGTTGGTGTTCACATGTTGAGTTGCAGCTTTGAATATTGTCTGCCTTTGTGTTCTCCTCCCCCTTGGGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000443624.6 |
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| CDS-3UTR CAA 90 bp | CTGTCATTCCTTCATGACGCATCAATGCTGATAAAATTTCTAGTACAGAACAGAGAACACACAACAGAATaGCACATTTCACTGAAAACT | + |
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Preference number: 5 (lower is better) Translates to: LSFLHDASMLIKFLVQNREHTTE*HISLKT Trigger: AGTTTTCAGTGAAATGTGCAATTCTGTTGTGTGTTC...TCTGTTCTGTACTAGAAATTTTATCAGCATTGATGCGTCATGAAGGAATGACAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000643754.2 |
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| CDS GCA 72 bp | GGCCAGCAGGCATTGCGGGCTCCATATTCCTCGGGCTaGGGGCGAAGTAGCCCCCGCAGGCTCGGCCTGCCA | + |
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Preference number: 6 (lower is better) Translates to: GQQALRAPYSSG*GRSSPRRLGLP Trigger: TGGCAGGCCGAGCCTGCGGGGGCTACTTCGCCCGCAGCCCGAGGAATATGGAGCCCGCAATGCCTGCTGGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS CAA 90 bp | GCGTCCTTGGCTCGAACGGCTCTGCTAGTTTTGGGCCAGCAGGCATaGCGGGCTCCATATTCCTCGGGCTGCGGGCGAAGTAGCCCCCGC | + |
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Preference number: 6 (lower is better) Translates to: ASLARTALLVLGQQA*RAPYSSGCGRSSPR Trigger: GCGGGGGCTACTTCGCCCGCAGCCCGAGGAATATGGAGCCCGCAATGCCTGCTGGCCCAAAACTAGCAGAGCCGTTCGAGCCAAGGACGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS GCA 72 bp | CGGGCTGCGGGCGAAGTAGCCCCCGCAGGCTCGGCCTaGCATGGATGGCGACGGATAAAGGAAAGCAAATCC | + |
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Preference number: 6 (lower is better) Translates to: RAAGEVAPAGSA*HGWRRIKESKS Trigger: GGATTTGCTTTCCTTTATCCGTCGCCATCCATGGCAGGCCGAGCCTGCGGGGGCTACTTCGCCCGCAGCCCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS CCA 72 bp | GGCGAAGTAGCCCCCGCAGGCTCGGCCTGCCATGGATaGCGACGGATAAAGGAAAGCAAATCCAGGTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: GEVAPAGSACHG*RRIKESKSRSQ Trigger: CTGGGACCTGGATTTGCTTTCCTTTATCCGTCGCCATCCATGGCAGGCCGAGCCTGCGGGGGCTACTTCGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS CCA 72 bp | TGCGGGCGAAGTAGCCCCCGCAGGCTCGGCCTGCCATaGATGGCGACGGATAAAGGAAAGCAAATCCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: CGRSSPRRLGLP*MATDKGKQIQV Trigger: GACCTGGATTTGCTTTCCTTTATCCGTCGCCATCCATGGCAGGCCGAGCCTGCGGGGGCTACTTCGCCCGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS CAA 72 bp | GCTCGAACGGCTCTGCTAGTTTTGGGCCAGCAGGCATaGCGGGCTCCATATTCCTCGGGCTGCGGGCGAAGT | + |
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Preference number: 6 (lower is better) Translates to: ARTALLVLGQQA*RAPYSSGCGRS Trigger: ACTTCGCCCGCAGCCCGAGGAATATGGAGCCCGCAATGCCTGCTGGCCCAAAACTAGCAGAGCCGTTCGAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS CAA 90 bp | ACAGAATTCAACCCTGCGTCCTTGGCTCGAACGGCTCTGCTAGTTTaGGGCCAGCAGGCATTGCGGGCTCCATATTCCTCGGGCTGCGGG | + |
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Preference number: 6 (lower is better) Translates to: TEFNPASLARTALLV*GQQALRAPYSSGCG Trigger: CCCGCAGCCCGAGGAATATGGAGCCCGCAATGCCTGCTGGCCCAAAACTAGCAGAGCCGTTCGAGCCAAGGACGCAGGGTTGAATTCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS CAA 72 bp | AACCCTGCGTCCTTGGCTCGAACGGCTCTGCTAGTTTaGGGCCAGCAGGCATTGCGGGCTCCATATTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: NPASLARTALLV*GQQALRAPYSS Trigger: CGAGGAATATGGAGCCCGCAATGCCTGCTGGCCCAAAACTAGCAGAGCCGTTCGAGCCAAGGACGCAGGGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS CAA 90 bp | CCTAAAACGATGGCAGGGAAAGTGACAGAATTCAACCCTGCGTCCTaGGCTCGAACGGCTCTGCTAGTTTTGGGCCAGCAGGCATTGCGG | + |
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Preference number: 6 (lower is better) Translates to: PKTMAGKVTEFNPAS*ARTALLVLGQQALR Trigger: CCGCAATGCCTGCTGGCCCAAAACTAGCAGAGCCGTTCGAGCCAAGGACGCAGGGTTGAATTCTGTCACTTTCCCTGCCATCGTTTTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS CAA 72 bp | ATGGCAGGGAAAGTGACAGAATTCAACCCTGCGTCCTaGGCTCGAACGGCTCTGCTAGTTTTGGGCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: MAGKVTEFNPAS*ARTALLVLGQQ Trigger: CTGCTGGCCCAAAACTAGCAGAGCCGTTCGAGCCAAGGACGCAGGGTTGAATTCTGTCACTTTCCCTGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000467075.2 |
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| CDS TCA 72 bp | CACTTGGCAGCCCAATGGATTCTGGAGCAAGACCCATaGTCTGTGTCTGACAAAGCTGCCACCAGCATCCCA | + |
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Preference number: 6 (lower is better) Translates to: HLAAQWILEQDP*SVSDKAATSIP Trigger: TGGGATGCTGGTGGCAGCTTTGTCAGACACAGATCATGGGTCTTGCTCCAGAATCCATTGGGCTGCCAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443624.6 |
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| CDS GCA 72 bp | CCTTTAAGCCATGTGGGTGCTTTACAGATCCTCGACTaGAAGTTCCCCAACAGCAGGGATCTTGTCCACCTT | + |
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Preference number: 6 (lower is better) Translates to: PLSHVGALQILD*KFPNSRDLVHL Trigger: AAGGTGGACAAGATCCCTGCTGTTGGGGAACTTGCAGTCGAGGATCTGTAAAGCACCCACATGGCTTAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443624.6 |
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| CDS GCA 72 bp | GCCAACCAACCCATAGGCCAAATGTGGCACCAATACTaGCTCTCTCCAAAGTTTCAAATCACTGGCTGGAGG | + |
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Preference number: 6 (lower is better) Translates to: ANQPIGQMWHQY*LSPKFQITGWR Trigger: CCTCCAGCCAGTGATTTGAAACTTTGGAGAGAGGCAGTATTGGTGCCACATTTGGCCTATGGGTTGGTTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443624.6 |
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| CDS CAA 72 bp | ACTGCAAGTTCCCCAACAGCAGGGATCTTGTCCACCTaGTTCAGAGCTGCACCCCTACATTTGCCACAAATG | + |
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Preference number: 6 (lower is better) Translates to: TASSPTAGILST*FRAAPLHLPQM Trigger: CATTTGTGGCAAATGTAGGGGTGCAGCTCTGAACAAGGTGGACAAGATCCCTGCTGTTGGGGAACTTGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000443624.6 |
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| CDS CCA 72 bp | AGCCTCAGTGCAGCCAACCAACCCATAGGCCAAATGTaGCACCAATACTGCCTCTCTCCAAAGTTTCAAATC | + |
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Preference number: 6 (lower is better) Translates to: SLSAANQPIGQM*HQYCLSPKFQI Trigger: GATTTGAAACTTTGGAGAGAGGCAGTATTGGTGCCACATTTGGCCTATGGGTTGGTTGGCTGCACTGAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443624.6 |
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| CDS GCA 72 bp | GAACAGTTTCCTTCATCCACCTTTAAGCCATGTGGGTaGTTTACAGATCCTCGACTGCAAGTTCCCCAACAG | + |
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Preference number: 6 (lower is better) Translates to: EQFPSSTFKPCG*FTDPRLQVPQQ Trigger: CTGTTGGGGAACTTGCAGTCGAGGATCTGTAAAGCACCCACATGGCTTAAAGGTGGATGAAGGAAACTGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000443624.6 |
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| CDS TCA 72 bp | GCTCGGAACCTATCCTTCCTCCACGAACGGAACGGGTaGAGAGAAAACTCAGGACAGTTATTGAGTGTTAAA | + |
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Preference number: 6 (lower is better) Translates to: ARNLSFLHERNG*RENSGQLLSVK Trigger: TTTAACACTCAATAACTGTCCTGAGTTTTCTCTTCACCCGTTCCGTTCGTGGAGGAAGGATAGGTTCCGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000458455.2 |
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| CDS CCA 72 bp | CAATACTGCCTCTCTCCAAAGTTTCAAATCACTGGCTaGAGGGAACAGTTTCCTTCATCCACCTTTAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: QYCLSPKFQITG*REQFPSSTFKP Trigger: TGGCTTAAAGGTGGATGAAGGAAACTGTTCCCTCCAGCCAGTGATTTGAAACTTTGGAGAGAGGCAGTATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443624.6 |
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| CDS CCA 72 bp | CAACAGTCACCTAGCCAGCTCAGAGTCAAGAGCAGATaGACAAGACTCACACATTACAGACAGATCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: QQSPSQLRVKSR*TRLTHYRQIFK Trigger: TTTGAAGATCTGTCTGTAATGTGTGAGTCTTGTCCATCTGCTCTTGACTCTGAGCTGGCTAGGTGACTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000443624.6 |
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