Pregenerated sensors for RPIA (Homo sapiens)
Ensembl gene IDs: ENSG00000153574Ensembl transcript IDs: ENST00000283646.5
Found 57 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTTCACATTTCACAGCAGTGCTTTGGCAGTACTGGCAAGCATTTCTaGTCAACTGCTTCCAACAGCAGGAATATGAAGAAACCCCCAGAT | + |
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Preference number: 1 (lower is better) Translates to: LHISQQCFGSTGKHF*STASNSRNMKKPPD Trigger: ATCTGGGGGTTTCTTCATATTCCTGCTGTTGGAAGCAGTTGACCAGAAATGCTTGCCAGTACTGCCAAAGCACTGCTGTGAAATGTGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| 3UTR-3UTR CCA 90 bp | TTCACAGCAGTGCTTTGGCAGTACTGGCAAGCATTTCTGGTCAACTGCTTCCAATCAGGAGATCACTGCTaGTGGGCCCCTCACTTTACC | + |
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Preference number: 2 (lower is better) Translates to: FTAVLWQYWQAFLVNCFQSGDHC*WAPHFT Trigger: GGTAAAGTGAGGGGCCCACCAGCAGTGATCTCCTGA...TTGGAAGCAGTTGACCAGAAATGCTTGCCAGTACTGCCAAAGCACTGCTGTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| 3UTR-3UTR CCA 90 bp | CAAAGTACTTCACATTTCACAGCAGTGCTTTGGCAGTACTGGCAAGCATTTCTGGAGGTACGTCCACCTTaGCTGTGGGCTGGAGACTCA | + |
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Preference number: 2 (lower is better) Translates to: QSTSHFTAVLWQYWQAFLEVRPP*LWAGDS Trigger: TGAGTCTCCAGCCCACAGCCAAGGTGGACGTACCTC...CAGAAATGCTTGCCAGTACTGCCAAAGCACTGCTGTGAAATGTGAAGTACTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| 3UTR-3UTR TCA 90 bp | CAAAGTACTTCACATTTCACAGCAGTGCTTTGGCAGTACTGGCAAGCATTTCTGCCAACAGCAGGAATATaGAGAAACCCCCAGATCTTA | + |
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Preference number: 2 (lower is better) Translates to: QSTSHFTAVLWQYWQAFLPTAGI*RNPQIL Trigger: TAAGATCTGGGGGTTTCTTCATATTCCTGCTGTTGG...CAGAAATGCTTGCCAGTACTGCCAAAGCACTGCTGTGAAATGTGAAGTACTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| 3UTR-3UTR CAA 90 bp | TTTCCAGTAAGGCATCAGGAGATCACTGCTGGTGGGCCCCTCACTTTACCAGCTAGAGGTACGTCCACCTaGGCTGTGGGCTGGAGACTC | + |
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Preference number: 3 (lower is better) Translates to: FPVRHQEITAGGPLTLPARGTST*AVGWRL Trigger: GAGTCTCCAGCCCACAGCCAAGGTGGACGTACCTCT...AGCTGGTAAAGTGAGGGGCCCACCAGCAGTGATCTCCTGATGCCTTACTGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| 3UTR GCA 72 bp | GTAAACAAAGTTTCCAGTAAGGCATCAGGAGATCACTaGTGGTGGGCCCCTCACTTTACCAGCTTAAAGAAG | + |
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Preference number: 3 (lower is better) Translates to: VNKVSSKASGDH*WWAPHFTSLKK Trigger: CTTCTTTAAGCTGGTAAAGTGAGGGGCCCACCAGCAGTGATCTCCTGATGCCTTACTGGAAACTTTGTTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| 3UTR CCA 72 bp | AGTACTTCACATTTCACAGCAGTGCTTTGGCAGTACTaGCAAGCATTTCTGGTCAACTGCTTCCAACAGCAG | + |
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Preference number: 3 (lower is better) Translates to: STSHFTAVLWQY*QAFLVNCFQQQ Trigger: CTGCTGTTGGAAGCAGTTGACCAGAAATGCTTGCCAGTACTGCCAAAGCACTGCTGTGAAATGTGAAGTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| 3UTR CCA 72 bp | AACAAAGTTTCCAGTAAGGCATCAGGAGATCACTGCTaGTGGGCCCCTCACTTTACCAGCTTAAAGAAGTTT | + |
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Preference number: 3 (lower is better) Translates to: NKVSSKASGDHC*WAPHFTSLKKF Trigger: AAACTTCTTTAAGCTGGTAAAGTGAGGGGCCCACCAGCAGTGATCTCCTGATGCCTTACTGGAAACTTTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR GCA 90 bp | AGGCTCCTGGAGAGGTACGTCCACCTTGGCTGTGGGCTGGAGACTCAAGGTGAAAAGGGCCCGGGGCGCTaGATCCCGACGCCTCGCTCC | + |
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Preference number: 4 (lower is better) Translates to: RLLERYVHLGCGLETQGEKGPGR*IPTPRS Trigger: GGAGCGAGGCGTCGGGATGCAGCGCCCCGGGCCCTT...TTCACCTTGAGTCTCCAGCCCACAGCCAAGGTGGACGTACCTCTCCAGGAGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR GCA 90 bp | AGGCTCCTGGAGAGGTACGTCCACCTTGGCTGTGGGCTGGAGACTCAAGGTGAAAGGGTCAAGCCATACTaGAGGATGAGCTGGCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: RLLERYVHLGCGLETQGERVKPY*RMSWRA Trigger: GGCCCGCCAGCTCATCCTGCAGTATGGCTTGACCCT...TTCACCTTGAGTCTCCAGCCCACAGCCAAGGTGGACGTACCTCTCCAGGAGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CCA 90 bp | GGCTCCTGGAGAGGTACGTCCACCTTGGCTGTGGGCTGGAGACTCAAGGTGAACTACTGCAGGATGAGCTaGCGGGCCTGGAAGGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: GSWRGTSTLAVGWRLKVNYCRMS*RAWKEV Trigger: CACTTCCTTCCAGGCCCGCCAGCTCATCCTGCAGTA...GTTCACCTTGAGTCTCCAGCCCACAGCCAAGGTGGACGTACCTCTCCAGGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CCA 90 bp | ATCAGGAGATCACTGCTGGTGGGCCCCTCACTTTACCAGCTTAAAGAAGTTTTGCCCGGCAGCCGCACGTaGGAACCCGGGAGGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: IRRSLLVGPSLYQLKEVLPGSRT*EPGRSQ Trigger: CTGGGACCTCCCGGGTTCCCACGTGCGGCTGCCGGG...CAAAACTTCTTTAAGCTGGTAAAGTGAGGGGCCCACCAGCAGTGATCTCCTGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR GCA 90 bp | AGGCTCCTGGAGAGGTACGTCCACCTTGGCTGTGGGCTGGAGACTCAAGGTGAAGCATCAGGAGATCACTaGTGGTGGGCCCCTCACTTT | + |
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Preference number: 4 (lower is better) Translates to: RLLERYVHLGCGLETQGEASGDH*WWAPHF Trigger: AAAGTGAGGGGCCCACCAGCAGTGATCTCCTGATGC...TTCACCTTGAGTCTCCAGCCCACAGCCAAGGTGGACGTACCTCTCCAGGAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR TCA 90 bp | AGGCTCCTGGAGAGGTACGTCCACCTTGGCTGTGGGCTGGAGACTCAAGGTGAAGTCGATCCAGATCACTaGGGGTCAAGCCATACTGCA | + |
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Preference number: 4 (lower is better) Translates to: RLLERYVHLGCGLETQGEVDPDH*GSSHTA Trigger: TGCAGTATGGCTTGACCCTCAGTGATCTGGATCGAC...TTCACCTTGAGTCTCCAGCCCACAGCCAAGGTGGACGTACCTCTCCAGGAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR TCA 90 bp | GGCTCCTGGAGAGGTACGTCCACCTTGGCTGTGGGCTGGAGACTCAAGGTGAACCAGGACCAGCCTTGTTaGCAGCCATTCGAAGTTCAA | + |
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Preference number: 4 (lower is better) Translates to: GSWRGTSTLAVGWRLKVNQDQPC*QPFEVQ Trigger: TTGAACTTCGAATGGCTGTCAACAAGGCTGGTCCTG...GTTCACCTTGAGTCTCCAGCCCACAGCCAAGGTGGACGTACCTCTCCAGGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CCA 90 bp | TTCACAGCAGTGCTTTGGCAGTACTGGCAAGCATTTCTGGTCAACTGCTTCCAACCGGGCAGATGCTGTTaGAGTCCCCGCAGCTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: FTAVLWQYWQAFLVNCFQPGRCC*SPRSWC Trigger: GCACCAGCTGCGGGGACTCCAACAGCATCTGCCCGG...TTGGAAGCAGTTGACCAGAAATGCTTGCCAGTACTGCCAAAGCACTGCTGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR GCA 90 bp | TTCACAGCAGTGCTTTGGCAGTACTGGCAAGCATTTCTGGTCAACTGCTTCCAAAGCTGGTGCTTGTGTTaGCAGCACCGCCACGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: FTAVLWQYWQAFLVNCFQSWCLC*QHRHGS Trigger: GGACCCGTGGCGGTGCTGGCAACACAAGCACCAGCT...TTGGAAGCAGTTGACCAGAAATGCTTGCCAGTACTGCCAAAGCACTGCTGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR TCA 90 bp | CTCAGCAAACTCAATATTCAGAAGCTTTACCAGCAGACTCAAGTCAAAGGTTTTGCCCGTAGAGGGTGCTaGAGGGCCCGGGGCGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: LSKLNIQKLYQQTQVKGFARRGC*RARGAA Trigger: TGCAGCGCCCCGGGCCCTTCAGCACCCTCTACGGGC...AAAACCTTTGACTTGAGTCTGCTGGTAAAGCTTCTGAATATTGAGTTTGCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CCA 90 bp | TTCACAGCAGTGCTTTGGCAGTACTGGCAAGCATTTCTGGTCAACTGCTTCCAAGCCACAATCTTCTCCTaGGTCAGGCAGCCTCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: FTAVLWQYWQAFLVNCFQATIFS*VRQPPP Trigger: TGGCGGAGGCTGCCTGACCCAGGAGAAGATTGTGGC...TTGGAAGCAGTTGACCAGAAATGCTTGCCAGTACTGCCAAAGCACTGCTGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR GCA 90 bp | CTCAGCAAACTCAATATTCAGAAGCTTTACCAGCAGACTCAAGTCAAAGGTTTTACGGGTCCCAGACTGTaGACGCCCCGGCAGCCGCAC | + |
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Preference number: 4 (lower is better) Translates to: LSKLNIQKLYQQTQVKGFTGPRL*TPRQPH Trigger: GTGCGGCTGCCGGGGCGTGCACAGTCTGGGACCCGT...AAAACCTTTGACTTGAGTCTGCTGGTAAAGCTTCTGAATATTGAGTTTGCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CCA 90 bp | AGACAAGTAAACAAAGTTTCCAGTAAGGCATCAGGAGATCACTGCTGGTGGGCCTGGTTATTCCTCACGTaGTTCTCCACAGCCGCGCGG | + |
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Preference number: 4 (lower is better) Translates to: RQVNKVSSKASGDHCWWAWLFLT*FSTAAR Trigger: CCGCGCGGCTGTGGAGAACCACGTGAGGAATAACCA...GGCCCACCAGCAGTGATCTCCTGATGCCTTACTGGAAACTTTGTTTACTTGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CCA 90 bp | AAAGTTTCCAGTAAGGCATCAGGAGATCACTGCTGGTGGGCCCCTCACTTTACCGGCAAGGTCGATCTCTaGGTGTCGATCCAGATCACT | + |
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Preference number: 4 (lower is better) Translates to: KVSSKASGDHCWWAPHFTGKVDL*VSIQIT Trigger: AGTGATCTGGATCGACACCCAGAGATCGACCTTGCC...GGTAAAGTGAGGGGCCCACCAGCAGTGATCTCCTGATGCCTTACTGGAAACTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR TCA 90 bp | GCTTCCAACAGCAGGAATATGAAGAAACCCCCAGATCTTAGCAAAAGTGTAACAAGCCATACTGCAGGATaGGCTGGCGGGCCTGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: ASNSRNMKKPPDLSKSVTSHTAG*AGGPGR Trigger: CCTTCCAGGCCCGCCAGCTCATCCTGCAGTATGGCT...TGTTACACTTTTGCTAAGATCTGGGGGTTTCTTCATATTCCTGCTGTTGGAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR TCA 90 bp | ATCAGGAGATCACTGCTGGTGGGCCCCTCACTTTACCAGCTTAAAGAAGTTTTGCATAGGCCATTGGGATaGCCTCGATGGGGATTCCCT | + |
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Preference number: 4 (lower is better) Translates to: IRRSLLVGPSLYQLKEVLHRPLG*PRWGFP Trigger: AGGGAATCCCCATCGAGGTCATCCCAATGGCCTATG...CAAAACTTCTTTAAGCTGGTAAAGTGAGGGGCCCACCAGCAGTGATCTCCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CCA 90 bp | ATCAGGAGATCACTGCTGGTGGGCCCCTCACTTTACCAGCTTAAAGAAGTTTTGCACAGCTCGGCTCACTaGGACATAGGCCATTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: IRRSLLVGPSLYQLKEVLHSSAH*DIGHWD Trigger: ATCCCAATGGCCTATGTCCCAGTGAGCCGAGCTGTG...CAAAACTTCTTTAAGCTGGTAAAGTGAGGGGCCCACCAGCAGTGATCTCCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CCA 90 bp | ATCAGGAGATCACTGCTGGTGGGCCCCTCACTTTACCAGCTTAAAGAAGTTTTGTCAGGAGATCACTGCTaGTGGGCCCCTCACTTTACC | + |
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Preference number: 4 (lower is better) Translates to: IRRSLLVGPSLYQLKEVLSGDHC*WAPHFT Trigger: GGTAAAGTGAGGGGCCCACCAGCAGTGATCTCCTGA...CAAAACTTCTTTAAGCTGGTAAAGTGAGGGGCCCACCAGCAGTGATCTCCTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CCA 90 bp | TTCACAGCAGTGCTTTGGCAGTACTGGCAAGCATTTCTGGTCAACTGCTTCCAAGGGCCTGGAAGGAAGTaGGAATACAGACGAGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: FTAVLWQYWQAFLVNCFQGPGRK*EYRRGS Trigger: TGAACCTCGTCTGTATTCCCACTTCCTTCCAGGCCC...TTGGAAGCAGTTGACCAGAAATGCTTGCCAGTACTGCCAAAGCACTGCTGTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR GCA 90 bp | CTCAGCAAACTCAATATTCAGAAGCTTTACCAGCAGACTCAAGTCAAAGGTTTTAGTCCCCGCAGCTGGTaGTTGTGTTGCCAGCACCGC | + |
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Preference number: 4 (lower is better) Translates to: LSKLNIQKLYQQTQVKGFSPRSW*LCCQHR Trigger: GCGGTGCTGGCAACACAAGCACCAGCTGCGGGGACT...AAAACCTTTGACTTGAGTCTGCTGGTAAAGCTTCTGAATATTGAGTTTGCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR GCA 90 bp | TTTCCAGTAAGGCATCAGGAGATCACTGCTGGTGGGCCCCTCACTTTACCAGCTGCATTTCTGGTCAACTaGTTCCAACAGCAGGAATAT | + |
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Preference number: 4 (lower is better) Translates to: FPVRHQEITAGGPLTLPAAFLVN*FQQQEY Trigger: ATATTCCTGCTGTTGGAAGCAGTTGACCAGAAATGC...AGCTGGTAAAGTGAGGGGCCCACCAGCAGTGATCTCCTGATGCCTTACTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR TCA 90 bp | AAAGTTTCCAGTAAGGCATCAGGAGATCACTGCTGGTGGGCCCCTCACTTTACCACAACATTTTCTCCCTaGCAGCTTACATTCCAAGTC | + |
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Preference number: 4 (lower is better) Translates to: KVSSKASGDHCWWAPHFTTTFSP*QLTFQV Trigger: GACTTGGAATGTAAGCTGTCAGGGAGAAAATGTTGT...GGTAAAGTGAGGGGCCCACCAGCAGTGATCTCCTGATGCCTTACTGGAAACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CCA 90 bp | CTCAGCAAACTCAATATTCAGAAGCTTTACCAGCAGACTCAAGTCAAAGGTTTTTGGAGTCCCCGCAGCTaGTGCTTGTGTTGCCAGCAC | + |
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Preference number: 4 (lower is better) Translates to: LSKLNIQKLYQQTQVKGFWSPRS*CLCCQH Trigger: GTGCTGGCAACACAAGCACCAGCTGCGGGGACTCCA...AAAACCTTTGACTTGAGTCTGCTGGTAAAGCTTCTGAATATTGAGTTTGCTGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CCA 90 bp | AGATCACTGCTGGTGGGCCCCTCACTTTACCAGCTTAAAGAAGTTTTGATTTTTATGAGCTGGCGGGCCTaGAAGGAAGTGGGAATACAG | + |
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Preference number: 4 (lower is better) Translates to: RSLLVGPSLYQLKEVLIFMSWRA*KEVGIQ Trigger: CTGTATTCCCACTTCCTTCCAGGCCCGCCAGCTCAT...AAAAATCAAAACTTCTTTAAGCTGGTAAAGTGAGGGGCCCACCAGCAGTGATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CCA 90 bp | CAAAGTACTTCACATTTCACAGCAGTGCTTTGGCAGTACTGGCAAGCATTTCTGTGGGACATAGGCCATTaGGATGACCTCGATGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: QSTSHFTAVLWQYWQAFLWDIGH*DDLDGD Trigger: ATCCCCATCGAGGTCATCCCAATGGCCTATGTCCCA...CAGAAATGCTTGCCAGTACTGCCAAAGCACTGCTGTGAAATGTGAAGTACTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CCA 90 bp | GCTTCCAACAGCAGGAATATGAAGAAACCCCCAGATCTTAGCAAAAGTGTAACACATCAGCACCATCGATaGCAAGGTCGATCTCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: ASNSRNMKKPPDLSKSVTHQHHR*QGRSLG Trigger: ACCCAGAGATCGACCTTGCCATCGATGGTGCTGATG...TGTTACACTTTTGCTAAGATCTGGGGGTTTCTTCATATTCCTGCTGTTGGAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CCA 90 bp | CTCAGCAAACTCAATATTCAGAAGCTTTACCAGCAGACTCAAGTCAAAGGTTTTACGCCCCCAAACTTCTaGCTCACAGCTCGGCTCACT | + |
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Preference number: 4 (lower is better) Translates to: LSKLNIQKLYQQTQVKGFTPPNF*LTARLT Trigger: AGTGAGCCGAGCTGTGAGCCAGAAGTTTGGGGGCGT...AAAACCTTTGACTTGAGTCTGCTGGTAAAGCTTCTGAATATTGAGTTTGCTGAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CCA 90 bp | AGACAAGTAAACAAAGTTTCCAGTAAGGCATCAGGAGATCACTGCTGGTGGGCCTGTGTCCACCACACCTaGGATCATTTTGATAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: RQVNKVSSKASGDHCWWACVHHT*DHFDSC Trigger: ACAGCTATCAAAATGATCCCAGGTGTGGTGGACACA...GGCCCACCAGCAGTGATCTCCTGATGCCTTACTGGAAACTTTGTTTACTTGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CCA 90 bp | AGATCACTGCTGGTGGGCCCCTCACTTTACCAGCTTAAAGAAGTTTTGATTTTTACCTTGGCTGTGGGCTaGAGACTCAAGGTGAACACA | + |
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Preference number: 4 (lower is better) Translates to: RSLLVGPSLYQLKEVLIFTLAVG*RLKVNT Trigger: TGTGTTCACCTTGAGTCTCCAGCCCACAGCCAAGGT...AAAAATCAAAACTTCTTTAAGCTGGTAAAGTGAGGGGCCCACCAGCAGTGATCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CCA 90 bp | CTCAGCAAACTCAATATTCAGAAGCTTTACCAGCAGACTCAAGTCAAAGGTTTTGGAGATCACTGCTGGTaGGCCCCTCACTTTACCAGC | + |
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Preference number: 4 (lower is better) Translates to: LSKLNIQKLYQQTQVKGFGDHCW*APHFTS Trigger: GCTGGTAAAGTGAGGGGCCCACCAGCAGTGATCTCC...AAAACCTTTGACTTGAGTCTGCTGGTAAAGCTTCTGAATATTGAGTTTGCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CCA 90 bp | TTCACAGCAGTGCTTTGGCAGTACTGGCAAGCATTTCTGGTCAACTGCTTCCAATTCACAGCAGTGCTTTaGCAGTACTGGCAAGCATTT | + |
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Preference number: 4 (lower is better) Translates to: FTAVLWQYWQAFLVNCFQFTAVL*QYWQAF Trigger: AAATGCTTGCCAGTACTGCCAAAGCACTGCTGTGAA...TTGGAAGCAGTTGACCAGAAATGCTTGCCAGTACTGCCAAAGCACTGCTGTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CCA 90 bp | CAAAGTACTTCACATTTCACAGCAGTGCTTTGGCAGTACTGGCAAGCATTTCTGGTGCTTTGGCAGTACTaGCAAGCATTTCTGGTCAAC | + |
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Preference number: 4 (lower is better) Translates to: QSTSHFTAVLWQYWQAFLVLWQY*QAFLVN Trigger: GTTGACCAGAAATGCTTGCCAGTACTGCCAAAGCAC...CAGAAATGCTTGCCAGTACTGCCAAAGCACTGCTGTGAAATGTGAAGTACTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR TCA 90 bp | GCTTCCAACAGCAGGAATATGAAGAAACCCCCAGATCTTAGCAAAAGTGTAACACCAACAGCAGGAATATaGAGAAACCCCCAGATCTTA | + |
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Preference number: 4 (lower is better) Translates to: ASNSRNMKKPPDLSKSVTPTAGI*RNPQIL Trigger: TAAGATCTGGGGGTTTCTTCATATTCCTGCTGTTGG...TGTTACACTTTTGCTAAGATCTGGGGGTTTCTTCATATTCCTGCTGTTGGAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR GCA 90 bp | CTCAGCAAACTCAATATTCAGAAGCTTTACCAGCAGACTCAAGTCAAAGGTTTTCACATTTCACAGCAGTaGTTTGGCAGTACTGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: LSKLNIQKLYQQTQVKGFHISQQ*FGSTGK Trigger: CTTGCCAGTACTGCCAAAGCACTGCTGTGAAATGTG...AAAACCTTTGACTTGAGTCTGCTGGTAAAGCTTCTGAATATTGAGTTTGCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR TCA 90 bp | TATTTCTCAGCAAACTCAATATTCAGAAGCTTTACCAGCAGACTCAAGTCAAAGAGAGGTAAGGACTTCTaGCGCCAAACCATGCAAGTA | + |
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Preference number: 4 (lower is better) Translates to: YFSANSIFRSFTSRLKSKRGKDF*RQTMQV Trigger: TACTTGCATGGTTTGGCGTCAGAAGTCCTTACCTCT...CTTTGACTTGAGTCTGCTGGTAAAGCTTCTGAATATTGAGTTTGCTGAGAAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CCA 90 bp | TATTTCTCAGCAAACTCAATATTCAGAAGCTTTACCAGCAGACTCAAGTCAAAGCCAATTCCCAGCACTTaGTTATTCCTCACGTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: YFSANSIFRSFTSRLKSKPIPST*LFLTWF Trigger: GAACCACGTGAGGAATAACCAAGTGCTGGGAATTGG...CTTTGACTTGAGTCTGCTGGTAAAGCTTCTGAATATTGAGTTTGCTGAGAAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CAA 90 bp | TTCACAGCAGTGCTTTGGCAGTACTGGCAAGCATTTCTGGTCAACTGCTTCCAACCCCGCAGCTGGTGCTaGTGTTGCCAGCACCGCCAC | + |
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Preference number: 5 (lower is better) Translates to: FTAVLWQYWQAFLVNCFQPRSWC*CCQHRH Trigger: GTGGCGGTGCTGGCAACACAAGCACCAGCTGCGGGG...TTGGAAGCAGTTGACCAGAAATGCTTGCCAGTACTGCCAAAGCACTGCTGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CAA 90 bp | ATCAGGAGATCACTGCTGGTGGGCCCCTCACTTTACCAGCTTAAAGAAGTTTTGGCCGGGCAGATGCTGTaGGAGTCCCCGCAGCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: IRRSLLVGPSLYQLKEVLAGQML*ESPQLV Trigger: CACCAGCTGCGGGGACTCCAACAGCATCTGCCCGGC...CAAAACTTCTTTAAGCTGGTAAAGTGAGGGGCCCACCAGCAGTGATCTCCTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CAA 90 bp | AGGCTCCTGGAGAGGTACGTCCACCTTGGCTGTGGGCTGGAGACTCAAGGTGAAACAGGACCAGCCTTGTaGACAGCCATTCGAAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: RLLERYVHLGCGLETQGETGPAL*TAIRSS Trigger: TGAACTTCGAATGGCTGTCAACAAGGCTGGTCCTGT...TTCACCTTGAGTCTCCAGCCCACAGCCAAGGTGGACGTACCTCTCCAGGAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CAA 90 bp | GGCTCCTGGAGAGGTACGTCCACCTTGGCTGTGGGCTGGAGACTCAAGGTGAACTTTCACAGCAGTGCTTaGGCAGTACTGGCAAGCATT | + |
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Preference number: 5 (lower is better) Translates to: GSWRGTSTLAVGWRLKVNFHSSA*AVLASI Trigger: AATGCTTGCCAGTACTGCCAAAGCACTGCTGTGAAA...GTTCACCTTGAGTCTCCAGCCCACAGCCAAGGTGGACGTACCTCTCCAGGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CAA 90 bp | AGACAAGTAAACAAAGTTTCCAGTAAGGCATCAGGAGATCACTGCTGGTGGGCCCAGCCTCCGCCACCCTaGATGAGATTGAGATCAGCA | + |
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Preference number: 5 (lower is better) Translates to: RQVNKVSSKASGDHCWWAQPPPP*MRLRSA Trigger: TGCTGATCTCAATCTCATCAAGGGTGGCGGAGGCTG...GGCCCACCAGCAGTGATCTCCTGATGCCTTACTGGAAACTTTGTTTACTTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CAA 90 bp | AGGCTCCTGGAGAGGTACGTCCACCTTGGCTGTGGGCTGGAGACTCAAGGTGAAACACCTGGGATCATTTaGATAGCTGTATTCACTTCA | + |
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Preference number: 5 (lower is better) Translates to: RLLERYVHLGCGLETQGETPGII*IAVFTS Trigger: TGAAGTGAATACAGCTATCAAAATGATCCCAGGTGT...TTCACCTTGAGTCTCCAGCCCACAGCCAAGGTGGACGTACCTCTCCAGGAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CAA 90 bp | GCTTCCAACAGCAGGAATATGAAGAAACCCCCAGATCTTAGCAAAAGTGTAACAAGAGGTACGTCCACCTaGGCTGTGGGCTGGAGACTC | + |
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Preference number: 5 (lower is better) Translates to: ASNSRNMKKPPDLSKSVTRGTST*AVGWRL Trigger: GAGTCTCCAGCCCACAGCCAAGGTGGACGTACCTCT...TGTTACACTTTTGCTAAGATCTGGGGGTTTCTTCATATTCCTGCTGTTGGAAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CAA 90 bp | ATCAGGAGATCACTGCTGGTGGGCCCCTCACTTTACCAGCTTAAAGAAGTTTTGCCACCCTTGATGAGATaGAGATCAGCATCTACTTCA | + |
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Preference number: 5 (lower is better) Translates to: IRRSLLVGPSLYQLKEVLPPLMR*RSASTS Trigger: TGAAGTAGATGCTGATCTCAATCTCATCAAGGGTGG...CAAAACTTCTTTAAGCTGGTAAAGTGAGGGGCCCACCAGCAGTGATCTCCTGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CAA 90 bp | GCTTCCAACAGCAGGAATATGAAGAAACCCCCAGATCTTAGCAAAAGTGTAACATCCAATTCCCAGCACTaGGTTATTCCTCACGTGGTT | + |
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Preference number: 5 (lower is better) Translates to: ASNSRNMKKPPDLSKSVTSNSQH*VIPHVV Trigger: AACCACGTGAGGAATAACCAAGTGCTGGGAATTGGA...TGTTACACTTTTGCTAAGATCTGGGGGTTTCTTCATATTCCTGCTGTTGGAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS-3UTR CAA 90 bp | AGATCACTGCTGGTGGGCCCCTCACTTTACCAGCTTAAAGAAGTTTTGATTTTTGAGGTTCAGATTCTCTaGCTTCACCCTTTCAGCTAT | + |
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Preference number: 5 (lower is better) Translates to: RSLLVGPSLYQLKEVLIFEVQIL*LHPFSY Trigger: ATAGCTGAAAGGGTGAAGCAAGAGAATCTGAACCTC...AAAAATCAAAACTTCTTTAAGCTGGTAAAGTGAGGGGCCCACCAGCAGTGATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS TCA 72 bp | CGGGCAGCGGGGCCAAGACCCGCCCGTAGAGGGTGCTaGAGGGCCCGGGGCGCTGCATCCCGACGCCTCGCT | + |
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Preference number: 6 (lower is better) Translates to: RAAGPRPARRGC*RARGAASRRLA Trigger: AGCGAGGCGTCGGGATGCAGCGCCCCGGGCCCTTCAGCACCCTCTACGGGCGGGTCTTGGCCCCGCTGCCCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS GCA 72 bp | GCTTGTGTTGCCAGCACCGCCACGGGTCCCAGACTGTaGACGCCCCGGCAGCCGCACGTGGGAACCCGGGAG | + |
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Preference number: 6 (lower is better) Translates to: ACVASTATGPRL*TPRQPHVGTRE Trigger: CTCCCGGGTTCCCACGTGCGGCTGCCGGGGCGTGCACAGTCTGGGACCCGTGGCGGTGCTGGCAACACAAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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| CDS CAA 72 bp | TCCTGGGTCAGGCAGCCTCCGCCACCCTTGATGAGATaGAGATCAGCATCTACTTCATCAGCACCATCGATG | + |
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Preference number: 6 (lower is better) Translates to: SWVRQPPPPLMR*RSASTSSAPSM Trigger: CATCGATGGTGCTGATGAAGTAGATGCTGATCTCAATCTCATCAAGGGTGGCGGAGGCTGCCTGACCCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000283646.5 |
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