RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RPH3AL (Homo sapiens)

Ensembl gene IDs: ENSG00000181031, ENSG00000262334

Ensembl transcript IDs: ENST00000323434.12, ENST00000331302.12, ENST00000536489.6, ENST00000570638.5, ENST00000570893.5, ENST00000570954.1, ENST00000572075.5, ENST00000572866.1, ENST00000572965.1, ENST00000573448.1, ENST00000573588.5, ENST00000573780.5, ENST00000574011.1, ENST00000574722.5, ENST00000574953.5, ENST00000575130.5, ENST00000575634.5, ENST00000575736.5, ENST00000576001.5, ENST00000576420.5, ENST00000577079.5, ENST00000608278.2, ENST00000608519.5, ENST00000609977.5, ENST00000618002.4, ENST00000631551.1, ENST00000631558.1, ENST00000631722.1, ENST00000631901.1, ENST00000631957.1, ENST00000632000.1, ENST00000632056.1, ENST00000632071.1, ENST00000632083.1, ENST00000632176.1, ENST00000632337.1, ENST00000632511.1, ENST00000632545.1, ENST00000632576.1, ENST00000632610.1, ENST00000632616.1, ENST00000632671.1, ENST00000632678.1, ENST00000632722.1, ENST00000632735.1, ENST00000633046.1, ENST00000633160.1, ENST00000633168.1, ENST00000633184.1, ENST00000633196.1, ENST00000633301.1, ENST00000633332.1, ENST00000633726.1, ENST00000633744.1, ENST00000633904.1, ENST00000633922.1, ENST00000634024.1, ENST00000634042.1, ENST00000634090.1, ENST00000634137.1, ENST00000634166.1, ENST00000634169.1

Found 769 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCTCTCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTaGATGAAGTATTTTCATGCCAAGCCAAACCTCCTGAAGAGAAGT +
Preference number: 1 (lower is better)
Translates to: LSLQGRVFQKHLPIL*MKYFHAKPNLLKRS
Trigger: ACTTCTCTTCAGGAGGTTTGGCTTGGCATGAAAATACTTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR GCA 90 bp CCCAGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGGCTGAGGGAGCCACGTaGCCTGGCTGGGGATGCACC +
Preference number: 2 (lower is better)
Translates to: PSLERRPFQTQEPGVWGRAEGAT*PGWGCT
Trigger: GGTGCATCCCCAGCCAGGGCACGTGGCTCCCTCAGC...CCTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR CCA 90 bp GCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGAGGCGCTGAGGGCAGTGGTTaGAGGGGGTGGCGGATGCAG +
Preference number: 2 (lower is better)
Translates to: AWREGPSRPRNPGFGAGGAEGSG*RGWRMQ
Trigger: CTGCATCCGCCACCCCCTCCAACCACTGCCCTCAGC...GCCTCCTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR CCA 90 bp GGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTGAGCCGGGCAGGGTCTaGCAGGAATCCTCCACAGGG +
Preference number: 2 (lower is better)
Translates to: GEADGSQHWFVESWPTGCEPGRV*QESSTG
Trigger: CCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTC...ACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
3UTR-3UTR TCA 90 bp AAGGGGTGCAGAAAGGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTCAACAGGGTGTCTGGTaGGGGCACAAGGACCGGTCA +
Preference number: 2 (lower is better)
Translates to: KGCRKALSWGGRRLPTLVQQGVW*GHKDRS
Trigger: TGACCGGTCCTTGTGCCCTCACCAGACACCCTGTTG...AACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCCTTTCTGCACCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
3UTR-3UTR GCA 90 bp CCCAGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGCAGCTTCGGAGGCCGTaGCCTAGGTTTCATTTAGTC +
Preference number: 2 (lower is better)
Translates to: PSLERRPFQTQEPGVWGRQLRRP*PRFHLV
Trigger: GACTAAATGAAACCTAGGGCACGGCCTCCGAAGCTG...CCTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR CCA 90 bp AGTCTTGCCATTAATATAGCAACGGAGATAGCCCCACCGGGCGGCCCCTCTGACGCTGAGGGCAGTGGTTaGAGGGGGTGGCGGATGCAG +
Preference number: 2 (lower is better)
Translates to: SLAINIATEIAPPGGPSDAEGSG*RGWRMQ
Trigger: CTGCATCCGCCACCCCCTCCAACCACTGCCCTCAGC...GTCAGAGGGGCCGCCCGGTGGGGCTATCTCCGTTGCTATATTAATGGCAAGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR TCA 90 bp TCCCAGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGCCAACACTGGTTTGTTaGGTCATGGCCAACAGGGTG +
Preference number: 2 (lower is better)
Translates to: SQLGEKALPDPGTRGLGQPTLVC*VMANRV
Trigger: CACCCTGTTGGCCATGACTCAACAAACCAGTGTTGG...CTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR GCA 90 bp CCCAGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGGATGCACCTGAACGCTaGTCTTCAGCAAGTGAGTTC +
Preference number: 2 (lower is better)
Translates to: PSLERRPFQTQEPGVWGRDAPER*SSASEF
Trigger: GAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATC...CCTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR CCA 90 bp GCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGAGGCGGTAGATTGGGGGTGTaGGAGGGGAGGGTAATAAAT +
Preference number: 2 (lower is better)
Translates to: AWREGPSRPRNPGFGAGGGRLGV*EGRVIN
Trigger: ATTTATTACCCTCCCCTCCCACACCCCCAATCTACC...GCCTCCTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR TCA 90 bp AGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGAGGAAACCAGGCAGGCCATaGGGGGATTCAAAGAAACCT +
Preference number: 2 (lower is better)
Translates to: SLERRPFQTQEPGVWGRRKPGRP*GDSKKP
Trigger: AGGTTTCTTTGAATCCCCTCATGGCCTGCCTGGTTT...CCTCCTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR CCA 90 bp AGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGAGGATTAACTGGGTGTGGTaGCGGGCATCTGTAATCCCA +
Preference number: 2 (lower is better)
Translates to: SLERRPFQTQEPGVWGRRINWVW*RASVIP
Trigger: TGGGATTACAGATGCCCGCCACCACACCCAGTTAAT...CCTCCTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR CCA 90 bp GGGGATGCACCTGAACGCTGCTCTTCAGCAAGTGAGTTCATAGCATCCACCAGAAGTGGTTGGAGGGGGTaGCGGATGCAGACAGCTCCC +
Preference number: 2 (lower is better)
Translates to: GDAPERCSSASEFIASTRSGWRG*RMQTAP
Trigger: GGGAGCTGTCTGCATCCGCCACCCCCTCCAACCACT...TCTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR CCA 90 bp CTTTACTGTTTGCCAGCAGCAAGGACAAAAAGTGAATGGTGGGGGCCCAGGAGCAGTGGTTGGAGGGGGTaGCGGATGCAGACAGCTCCC +
Preference number: 2 (lower is better)
Translates to: LYCLPAARTKSEWWGPRSSGWRG*RMQTAP
Trigger: GGGAGCTGTCTGCATCCGCCACCCCCTCCAACCACT...GCTCCTGGGCCCCCACCATTCACTTTTTGTCCTTGCTGCTGGCAAACAGTAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR CCA 90 bp AGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGAGGAAAATTAACTGGGTGTaGTGGCGGGCATCTGTAATC +
Preference number: 2 (lower is better)
Translates to: SLERRPFQTQEPGVWGRRKINWV*WRASVI
Trigger: GATTACAGATGCCCGCCACCACACCCAGTTAATTTT...CCTCCTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR TCA 90 bp GGGGATGCACCTGAACGCTGCTCTTCAGCAAGTGAGTTCATAGCATCCACCAGATCACTGCTCTGGCTCTaGTGCTCACCTCTAAGGGGC +
Preference number: 2 (lower is better)
Translates to: GDAPERCSSASEFIASTRSLLWL*CSPLRG
Trigger: GCCCCTTAGAGGTGAGCATCAGAGCCAGAGCAGTGA...TCTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR TCA 90 bp GCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGAGGCCATTTGCCCATACTCTaGATGAAGTATTTTCATGCC +
Preference number: 2 (lower is better)
Translates to: AWREGPSRPRNPGFGAGGHLPIL*MKYFHA
Trigger: GGCATGAAAATACTTCATTCAGAGTATGGGCAAATG...GCCTCCTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR CCA 90 bp AGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGAGGAATACAAAAATTAACTaGGTGTGGTGGCGGGCATCT +
Preference number: 2 (lower is better)
Translates to: SLERRPFQTQEPGVWGRRNTKIN*VWWRAS
Trigger: AGATGCCCGCCACCACACCCAGTTAATTTTTGTATT...CCTCCTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR TCA 90 bp TTTACTGTTTGCCAGCAGCAAGGACAAAAAGTGAATGGTGGGGGCCCAGGAGCTTCACTGCTCTGGCTCTaGTGCTCACCTCTAAGGGGC +
Preference number: 2 (lower is better)
Translates to: FTVCQQQGQKVNGGGPGASLLWL*CSPLRG
Trigger: GCCCCTTAGAGGTGAGCATCAGAGCCAGAGCAGTGA...AGCTCCTGGGCCCCCACCATTCACTTTTTGTCCTTGCTGCTGGCAAACAGTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR TCA 90 bp GCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTGCGGTGGCTCACCCAACACTGGTTTGTTaGGTCATGGCCAACAGGGTG +
Preference number: 2 (lower is better)
Translates to: AGHEGIQRNLIGLGAVAHPTLVC*VMANRV
Trigger: CACCCTGTTGGCCATGACTCAACAAACCAGTGTTGG...GTGAGCCACCGCACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR GCA 90 bp GGCAATCGTGGTCTTCGATCAACACACTGGCTCGGTGCAAATTTTAATCTTCATCCGGGAGGTGGAGGTTaGAGTGAGCCGCGATCGTGC +
Preference number: 2 (lower is better)
Translates to: GNRGLRSTHWLGANFNLHPGGGG*SEPRSC
Trigger: GCACGATCGCGGCTCACTGCAACCTCCACCTCCCGG...ATGAAGATTAAAATTTGCACCGAGCCAGTGTGTTGATCGAAGACCACGATTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331302.12
ENST00000618002.4
3UTR-3UTR CCA 90 bp CTTTACTGTTTGCCAGCAGCAAGGACAAAAAGTGAATGGTGGGGGCCCAGGAGCGACGGCTCCCAACACTaGTTTGTTGAGTCATGGCCA +
Preference number: 2 (lower is better)
Translates to: LYCLPAARTKSEWWGPRSDGSQH*FVESWP
Trigger: TGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTC...GCTCCTGGGCCCCCACCATTCACTTTTTGTCCTTGCTGCTGGCAAACAGTAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR TCA 90 bp TCTCTCTCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAAAATAAGGTCGGGGGCTaGGGGCAGTGGTTGGAGGGG +
Preference number: 2 (lower is better)
Translates to: SLSSGKGFPEAFAHTLNENKVGG*GQWLEG
Trigger: CCCCTCCAACCACTGCCCTCAGCCCCCGACCTTATT...TTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGAGAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR TCA 90 bp CTTTACTGTTTGCCAGCAGCAAGGACAAAAAGTGAATGGTGGGGGCCCAGGAGCAAACCAGGCAGGCCATaGGGGGATTCAAAGAAACCT +
Preference number: 2 (lower is better)
Translates to: LYCLPAARTKSEWWGPRSKPGRP*GDSKKP
Trigger: AGGTTTCTTTGAATCCCCTCATGGCCTGCCTGGTTT...GCTCCTGGGCCCCCACCATTCACTTTTTGTCCTTGCTGCTGGCAAACAGTAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR GCA 90 bp GGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAAGTATTTTCATGCCAAGCCGGAGGGGGTGGCGGATaGAGACAGCTCCCCAGGAGA +
Preference number: 2 (lower is better)
Translates to: GFPEAFAHTLNEVFSCQAGGGGG*RQLPRR
Trigger: TCTCCTGGGGAGCTGTCTGCATCCGCCACCCCCTCC...GGCTTGGCATGAAAATACTTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR CCA 90 bp GGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAAGTATTTTCATGCCAAGCCGAGCCGGGCAGGGTCTaGCAGGAATCCTCCACAGGG +
Preference number: 2 (lower is better)
Translates to: GFPEAFAHTLNEVFSCQAEPGRV*QESSTG
Trigger: CCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTC...GGCTTGGCATGAAAATACTTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR TCA 90 bp TCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAAGTATTTACCGGGCGGCCCCTCTaGCACTGCATGTGGGAAACC +
Preference number: 2 (lower is better)
Translates to: SSGKGFPEAFAHTLNEVFTGRPL*HCMWET
Trigger: GGTTTCCCACATGCAGTGTCAGAGGGGCCGCCCGGT...AAATACTTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR TCA 90 bp GGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAAGTATTTTCATGCCAAGCCGGCTGGGGATGCACCTaGACGCTGCTCTTCAGCAAG +
Preference number: 2 (lower is better)
Translates to: GFPEAFAHTLNEVFSCQAGWGCT*TLLFSK
Trigger: CTTGCTGAAGAGCAGCGTTCAGGTGCATCCCCAGCC...GGCTTGGCATGAAAATACTTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR TCA 90 bp TCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAAGTATTTGGCGGGCGGATCACTTaGGACCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: SSGKGFPEAFAHTLNEVFGGRIT*DQEFKT
Trigger: GGTCTTGAACTCCTGGTCTCAAGTGATCCGCCCGCC...AAATACTTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR CCA 90 bp AGGCTGAGCAAAAACCAGGCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGAGGTAGATTGGGGGTGTaGGAGGGGAGGGTAATAAAT +
Preference number: 2 (lower is better)
Translates to: RLSKNQAGHEGIQRNLIGGRLGV*EGRVIN
Trigger: ATTTATTACCCTCCCCTCCCACACCCCCAATCTACC...TCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGCCTGGTTTTTGCTCAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR CCA 90 bp TTTACTGTTTGCCAGCAGCAAGGACAAAAAGTGAATGGTGGGGGCCCAGGAGCTAAAATTAACTGGGTGTaGTGGCGGGCATCTGTAATC +
Preference number: 2 (lower is better)
Translates to: FTVCQQQGQKVNGGGPGAKINWV*WRASVI
Trigger: GATTACAGATGCCCGCCACCACACCCAGTTAATTTT...AGCTCCTGGGCCCCCACCATTCACTTTTTGTCCTTGCTGCTGGCAAACAGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR GCA 90 bp TCTCTCTCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAAGATGCACCTGAACGCTaGTCTTCAGCAAGTGAGTTC +
Preference number: 2 (lower is better)
Translates to: SLSSGKGFPEAFAHTLNEDAPER*SSASEF
Trigger: GAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATC...TTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR CCA 90 bp AGGCTGAGCAAAAACCAGGCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGAAATACAAAAATTAACTaGGTGTGGTGGCGGGCATCT +
Preference number: 2 (lower is better)
Translates to: RLSKNQAGHEGIQRNLIGNTKIN*VWWRAS
Trigger: AGATGCCCGCCACCACACCCAGTTAATTTTTGTATT...TCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGCCTGGTTTTTGCTCAGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR CCA 90 bp TCTCTCTCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAAAATACAAAAATTAACTaGGTGTGGTGGCGGGCATCT +
Preference number: 2 (lower is better)
Translates to: SLSSGKGFPEAFAHTLNENTKIN*VWWRAS
Trigger: AGATGCCCGCCACCACACCCAGTTAATTTTTGTATT...TTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGAGAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR TCA 72 bp ACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGGTaGGGGCACAAGGACCGGTCAGGGAGGAGCCGGGCA +
Preference number: 3 (lower is better)
Translates to: TGLLSHGQQGVW*GHKDRSGRSRA
Trigger: TGCCCGGCTCCTCCCTGACCGGTCCTTGTGCCCTCACCAGACACCCTGTTGGCCATGACTCAACAAACCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
3UTR TCA 72 bp AGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTaGGTCATGGCCAACAGGGTGTCTGGTGAGGGCACA +
Preference number: 3 (lower is better)
Translates to: SWGGRRLPTLVC*VMANRVSGEGT
Trigger: TGTGCCCTCACCAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
3UTR GCA 72 bp GAGCCACGTGCCCTGGCTGGGGATGCACCTGAACGCTaGTCTTCAGCAAGTGAGTTCATAGCATCCACCAGA +
Preference number: 3 (lower is better)
Translates to: EPRALAGDAPER*SSASEFIASTR
Trigger: TCTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATCCCCAGCCAGGGCACGTGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR TCA 72 bp GGATCCTGGAAACAGTCTCCAACTCAAAAGGTGAGCTaGGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACT +
Preference number: 3 (lower is better)
Translates to: GSWKQSPTQKVS*GEVPGRQRSGT
Trigger: AGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTCAGCTCACCTTTTGAGTTGGAGACTGTTTCCAGGATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
3UTR-3UTR CAA 90 bp ACGTTCTCTCTCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAACCCAACACTGGTTTGTaGAGTCATGGCCAACAGGGT +
Preference number: 3 (lower is better)
Translates to: TFSLFREGFSRSICPYSEPNTGL*SHGQQG
Trigger: ACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGG...TTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGAGAGAGAACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR CAA 90 bp ACGTTCTCTCTCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAAAGAAACCTAATAGGATaGGGTGCGGTGGCTCACACC +
Preference number: 3 (lower is better)
Translates to: TFSLFREGFSRSICPYSERNLIG*GAVAHT
Trigger: GGTGTGAGCCACCGCACCCAATCCTATTAGGTTTCT...TTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGAGAGAGAACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR CAA 90 bp TCTCTCTCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAAGCTCCCAACACTGGTTaGTTGAGTCATGGCCAACAG +
Preference number: 3 (lower is better)
Translates to: SLSSGKGFPEAFAHTLNEAPNTG*LSHGQQ
Trigger: CTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGC...TTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGAGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR-3UTR CAA 90 bp TCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAAGTATTTGCTCCCAACACTGGTTaGTTGAGTCATGGCCAACAG +
Preference number: 3 (lower is better)
Translates to: SSGKGFPEAFAHTLNEVFAPNTG*LSHGQQ
Trigger: CTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGC...AAATACTTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR TCA 72 bp CAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTaGATGAAGTATTTTCATGCCAAGCCAAACCTCCTG +
Preference number: 3 (lower is better)
Translates to: QGRVFQKHLPIL*MKYFHAKPNLL
Trigger: CAGGAGGTTTGGCTTGGCATGAAAATACTTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
3UTR TCA 72 bp GTTTTAATTCTGAAGCATAACGTGCCACAGGGAAAGTaGGTTTCTTTACTGTTTGCCAGCAGCAAGGACAAA +
Preference number: 3 (lower is better)
Translates to: VLILKHNVPQGK*VSLLFASSKDK
Trigger: TTTGTCCTTGCTGCTGGCAAACAGTAAAGAAACTCACTTTCCCTGTGGCACGTTATGCTTCAGAATTAAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTGGCCCGGCGGGTGGGTaGACCCCATCCTGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GQGGAGQGLAGILHREVCGPAGG*TPSWGP
Trigger: AGGCCCCCAGGATGGGGTTCACCCACCCGCCGGGCC...ACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGGGCCCGGCGGGTGGGTaGACCCCATCCTGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GGAGQGLAGILHREVCSRGPAGG*TPSWGP
Trigger: AGGCCCCCAGGATGGGGTTCACCCACCCGCCGGGCC...CCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp CGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGGGGGCCTGCTGGAGCTaGGTCAGCAGCGGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: RSGRSRAGSGRNPPQGSLGACWS*VSSGGS
Trigger: CGAGCCCCCGCTGCTGACGCAGCTCCAGCAGGCCCC...CAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTGGGGCCTGCTGGAGCTaGGTCAGCAGCGGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: DRSGRSRAGSGRNPPQGSGACWS*VSSGGS
Trigger: CGAGCCCCCGCTGCTGACGCAGCTCCAGCAGGCCCC...ACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp AGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGGCCCGGCGGGTGGGTaGACCCCATCCTGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: SRAGSGRNPPQGSLFQAPGPAGG*TPSWGP
Trigger: AGGCCCCCAGGATGGGGTTCACCCACCCGCCGGGCC...TGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp TCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCGGCCCGGCGGGTGGGTaGACCCCATCCTGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: SGRSRAGSGRNPPQGSLFGPAGG*TPSWGP
Trigger: AGGCCCCCAGGATGGGGTTCACCCACCCGCCGGGCC...GAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp CAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCGGGGCCTGCTGGAGCTaGGTCAGCAGCGGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: QGGAGQGLAGILHREVCSGACWS*VSSGGS
Trigger: CGAGCCCCCGCTGCTGACGCAGCTCCAGCAGGCCCC...GGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCGGGGCCTGCTGGAGCTaGGTCAGCAGCGGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: EEPGRVWQESSTGKSVPGGACWS*VSSGGS
Trigger: CGAGCCCCCGCTGCTGACGCAGCTCCAGCAGGCCCC...GCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGGGGGCCTGCTGGAGCTaGGTCAGCAGCGGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: AGQGLAGILHREVCSRHQGACWS*VSSGGS
Trigger: CGAGCCCCCGCTGCTGACGCAGCTCCAGCAGGCCCC...CTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTAGGTGGCCCGGCGGGTaGGTGAACCCCATCCTGGGG +
Preference number: 4 (lower is better)
Translates to: DRSGRSRAGSGRNPPQGSRWPGG*VNPILG
Trigger: CCCCAGGATGGGGTTCACCCACCCGCCGGGCCACCT...ACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGCTGGAGGGGCCTGCTaGAGCTGCGTCAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: PVREEPGRVWQESSTGKSAGGAC*SCVSSG
Trigger: CCCGCTGCTGACGCAGCTCCAGCAGGCCCCTCCAGC...AGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp ACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCGCTGGAGGGGCCTGCTaGAGCTGCGTCAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: TGQGGAGQGLAGILHREVAGGAC*SCVSSG
Trigger: CCCGCTGCTGACGCAGCTCCAGCAGGCCCCTCCAGC...GACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACCGGCCCGGCGGGTGGGTaGACCCCATCCTGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: AGSGRNPPQGSLFQAPDTGPAGG*TPSWGP
Trigger: AGGCCCCCAGGATGGGGTTCACCCACCCGCCGGGCC...GGTGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCGGCCCGGCGGGTGGGTaGACCCCATCCTGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GTELGRQTAPNTGLLSHGGPAGG*TPSWGP
Trigger: AGGCCCCCAGGATGGGGTTCACCCACCCGCCGGGCC...GCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp TCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCGGGGCCTGCTGGAGCTaGGTCAGCAGCGGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: SGRSRAGSGRNPPQGSLFGACWS*VSSGGS
Trigger: CGAGCCCCCGCTGCTGACGCAGCTCCAGCAGGCCCC...GAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp CCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGCAGCTGGAGGGGCCTaGTGGAGCTGCGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PVREEPGRVWQESSTGKSAAGGA*WSCVSS
Trigger: GCTGCTGACGCAGCTCCAGCAGGCCCCTCCAGCTGC...AGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp CGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGGCAGCTGGAGGGGCCTaGTGGAGCTGCGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RSGRSRAGSGRNPPQGSLAAGGA*WSCVSS
Trigger: GCTGCTGACGCAGCTCCAGCAGGCCCCTCCAGCTGC...CAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp ACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCGCAGCTGGAGGGGCCTaGTGGAGCTGCGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: TGQGGAGQGLAGILHREVAAGGA*WSCVSS
Trigger: GCTGCTGACGCAGCTCCAGCAGGCCCCTCCAGCTGC...GACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTGCTGAGGGAGCCACGTaGCCTGGCTGGGGATGCACC +
Preference number: 4 (lower is better)
Translates to: DRSGRSRAGSGRNPPQGSAEGAT*PGWGCT
Trigger: GGTGCATCCCCAGCCAGGGCACGTGGCTCCCTCAGC...ACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp CCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGCTGAGGGAGCCACGTaGCCTGGCTGGGGATGCACC +
Preference number: 4 (lower is better)
Translates to: PVREEPGRVWQESSTGKSAEGAT*PGWGCT
Trigger: GGTGCATCCCCAGCCAGGGCACGTGGCTCCCTCAGC...AGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGAGGTGGCCCGGCGGGTaGGTGAACCCCATCCTGGGG +
Preference number: 4 (lower is better)
Translates to: AGQGLAGILHREVCSRHQRWPGG*VNPILG
Trigger: CCCCAGGATGGGGTTCACCCACCCGCCGGGCCACCT...CTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGAGGTGGCCCGGCGGGTaGGTGAACCCCATCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GGAGQGLAGILHREVCSRRWPGG*VNPILG
Trigger: CCCCAGGATGGGGTTCACCCACCCGCCGGGCCACCT...CCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGGCTGGAGGGGCCTGCTaGAGCTGCGTCAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: GGAGQGLAGILHREVCSRAGGAC*SCVSSG
Trigger: CCCGCTGCTGACGCAGCTCCAGCAGGCCCCTCCAGC...CCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp CCCAGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGCGCCTTTCCGGTCCCTaGCCCCAGTGGATGGGAGTC +
Preference number: 4 (lower is better)
Translates to: PSLERRPFQTQEPGVWGRRLSGP*PQWMGV
Trigger: GACTCCCATCCACTGGGGTCAGGGACCGGAAAGGCG...CCTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp CCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTCGCCTTTCCGGTCCCTaGCCCCAGTGGATGGGAGTC +
Preference number: 4 (lower is better)
Translates to: PVREEPGRVWQESSTGKSRLSGP*PQWMGV
Trigger: GACTCCCATCCACTGGGGTCAGGGACCGGAAAGGCG...AGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTACCGGGCGGCCCCTCTaGCACTGCATGTGGGAAACC +
Preference number: 4 (lower is better)
Translates to: DRSGRSRAGSGRNPPQGSTGRPL*HCMWET
Trigger: GGTTTCCCACATGCAGTGTCAGAGGGGCCGCCCGGT...ACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp CCCAGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGCGCCCGATTCTCTGCTaGTCCAGGACGTCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: PSLERRPFQTQEPGVWGRRPILC*SRTSSR
Trigger: GCGGCTCGACGTCCTGGAGCAGCAGAGAATCGGGCG...CCTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCGCCCGATTCTCTGCTaGTCCAGGACGTCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: DRSGRSRAGSGRNPPQGSRPILC*SRTSSR
Trigger: GCGGCTCGACGTCCTGGAGCAGCAGAGAATCGGGCG...ACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp CCCAGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGTGGGGGCCTCCACGCTaGCACCTGACTCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: PSLERRPFQTQEPGVWGRWGPPR*HLTPSR
Trigger: CCTGGAAGGAGTCAGGTGGCAGCGTGGAGGCCCCCA...CCTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp CGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTGGGGGCCTCCACGCTaGCACCTGACTCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: RSGRSRAGSGRNPPQGSLWGPPR*HLTPSR
Trigger: CCTGGAAGGAGTCAGGTGGCAGCGTGGAGGCCCCCA...CAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp AAGGGGTGCAGAAAGGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTGGGGCCTGCTGGAGCTaGGTCAGCAGCGGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: KGCRKALSWGGRRLPTLVGACWS*VSSGGS
Trigger: CGAGCCCCCGCTGCTGACGCAGCTCCAGCAGGCCCC...AACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCCTTTCTGCACCCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACCGGGGCCTGCTGGAGCTaGGTCAGCAGCGGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: AGSGRNPPQGSLFQAPDTGACWS*VSSGGS
Trigger: CGAGCCCCCGCTGCTGACGCAGCTCCAGCAGGCCCC...GGTGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCGGGGCCTGCTGGAGCTaGGTCAGCAGCGGGGGCTCG +
Preference number: 4 (lower is better)
Translates to: GTELGRQTAPNTGLLSHGGACWS*VSSGGS
Trigger: CGAGCCCCCGCTGCTGACGCAGCTCCAGCAGGCCCC...GCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGGCAGCTGGAGGGGCCTaGTGGAGCTGCGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: AGQGLAGILHREVCSRHQAAGGA*WSCVSS
Trigger: GCTGCTGACGCAGCTCCAGCAGGCCCCTCCAGCTGC...CTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp ACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCGGAGGGGGTGGCGGATaGAGACAGCTCCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: TGQGGAGQGLAGILHREVGGGGG*RQLPRR
Trigger: TCTCCTGGGGAGCTGTCTGCATCCGCCACCCCCTCC...GACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp TCCCAGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGCTGAGGGAGCCACGTaGCCTGGCTGGGGATGCACC +
Preference number: 4 (lower is better)
Translates to: SQLGEKALPDPGTRGLGQAEGAT*PGWGCT
Trigger: GGTGCATCCCCAGCCAGGGCACGTGGCTCCCTCAGC...CTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCTGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp ACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCAGATGGTGTCGGCCATaGCTCGGAGCACCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: TGQGGAGQGLAGILHREVRWCRP*LGAPGW
Trigger: CCAGCCGGGTGCTCCGAGCCATGGCCGACACCATCT...GACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGAGATGGTGTCGGCCATaGCTCGGAGCACCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: RSGRSRAGSGRNPPQGSLRWCRP*LGAPGW
Trigger: CCAGCCGGGTGCTCCGAGCCATGGCCGACACCATCT...CAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CCCAGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGAGATGGTGTCGGCCATaGCTCGGAGCACCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: PSLERRPFQTQEPGVWGRRWCRP*LGAPGW
Trigger: CCAGCCGGGTGCTCCGAGCCATGGCCGACACCATCT...CCTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp ACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTCCCCGTCTCACCACTaGCCAGGCTGCTCTGGCACC +
Preference number: 4 (lower is better)
Translates to: TGQGGAGQGLAGILHREVSPSHH*PGCSGT
Trigger: GGTGCCAGAGCAGCCTGGCCAGTGGTGAGACGGGGA...GACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTTCCCCGTCTCACCACTaGCCAGGCTGCTCTGGCACC +
Preference number: 4 (lower is better)
Translates to: DRSGRSRAGSGRNPPQGSSPSHH*PGCSGT
Trigger: GGTGCCAGAGCAGCCTGGCCAGTGGTGAGACGGGGA...ACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCAGCTGGAGGGGCCTGCTaGAGCTGCGTCAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: RSRAGSGRNPPQGSLFQAAGGAC*SCVSSG
Trigger: CCCGCTGCTGACGCAGCTCCAGCAGGCCCCTCCAGC...TGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGAGCTGGAGGGGCCTGCTaGAGCTGCGTCAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: PGRVWQESSTGKSVPGTRAGGAC*SCVSSG
Trigger: CCCGCTGCTGACGCAGCTCCAGCAGGCCCCTCCAGC...TCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp ACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCGAGCCGGGCAGGGTCTaGCAGGAATCCTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: TGQGGAGQGLAGILHREVEPGRV*QESSTG
Trigger: CCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTC...GACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGAGCCGGGCAGGGTCTaGCAGGAATCCTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: PVREEPGRVWQESSTGKSEPGRV*QESSTG
Trigger: CCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTC...AGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGGCTGAGGGCAGTGGTTaGAGGGGGTGGCGGATGCAG +
Preference number: 4 (lower is better)
Translates to: RSGRSRAGSGRNPPQGSLAEGSG*RGWRMQ
Trigger: CTGCATCCGCCACCCCCTCCAACCACTGCCCTCAGC...CAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGCTGAGGGCAGTGGTTaGAGGGGGTGGCGGATGCAG +
Preference number: 4 (lower is better)
Translates to: PVREEPGRVWQESSTGKSAEGSG*RGWRMQ
Trigger: CTGCATCCGCCACCCCCTCCAACCACTGCCCTCAGC...AGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CCCAGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGGCTGAGGGCAGTGGTTaGAGGGGGTGGCGGATGCAG +
Preference number: 4 (lower is better)
Translates to: PSLERRPFQTQEPGVWGRAEGSG*RGWRMQ
Trigger: CTGCATCCGCCACCCCCTCCAACCACTGCCCTCAGC...CCTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCCGCCTTTCCGGTCCCTaGCCCCAGTGGATGGGAGTC +
Preference number: 4 (lower is better)
Translates to: EPGRVWQESSTGKSVPGTRLSGP*PQWMGV
Trigger: GACTCCCATCCACTGGGGTCAGGGACCGGAAAGGCG...GGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGCGCCTTTCCGGTCCCTaGCCCCAGTGGATGGGAGTC +
Preference number: 4 (lower is better)
Translates to: AGQGLAGILHREVCSRHQRLSGP*PQWMGV
Trigger: GACTCCCATCCACTGGGGTCAGGGACCGGAAAGGCG...CTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp AGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGGGGCCCGGCGGGTGGGTaGACCCCATCCTGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: RQTAPNTGLLSHGQQGVWGPAGG*TPSWGP
Trigger: AGGCCCCCAGGATGGGGTTCACCCACCCGCCGGGCC...CCAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCACCGTTGTCGGGGGTaGCCCGAGGTGTTCCAGATG +
Preference number: 4 (lower is better)
Translates to: DRSGRSRAGSGRNPPQGSHRCRG*PEVFQM
Trigger: CATCTGGAACACCTCGGGTCACCCCCGACAACGGTG...ACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
CDS-3UTR GCA 90 bp GACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTGCCGGGCTGAGGTGCTaGTTCCTCCTCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: DRSGRSRAGSGRNPPQGSAGLRC*FLLCFS
Trigger: GGAGAAGCAGAGGAGGAAGCAGCACCTCAGCCCGGC...ACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTGCCCTCTGGATGACCTaGAGGATGGCCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: DRSGRSRAGSGRNPPQGSALWMT*RMASTS
Trigger: GGAGGTGGAGGCCATCCTGCAGGTCATCCAGAGGGC...ACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTGGGGTCTGGAGGGCCGCCCGATTCTCTGCTaGTCCAGGACGTCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: EGKFPEGSAQELLWGLEGRPILC*SRTSSR
Trigger: GCGGCTCGACGTCCTGGAGCAGCAGAGAATCGGGCG...GCCCTCCAGACCCCAGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR GCA 90 bp TCCCAGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGCGCCCGATTCTCTGCTaGTCCAGGACGTCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: SQLGEKALPDPGTRGLGQRPILC*SRTSSR
Trigger: GCGGCTCGACGTCCTGGAGCAGCAGAGAATCGGGCG...CTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp CGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTCTGGGCTCTCGCTCTaGCGGTTCCGTGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: RSGRSRAGSGRNPPQGSLSGLSL*RFRGQR
Trigger: CCTTTGCCCACGGAACCGGCAGAGCGAGAGCCCAGA...CAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp CCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTTCTGGGCTCTCGCTCTaGCGGTTCCGTGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: PVREEPGRVWQESSTGKSSGLSL*RFRGQR
Trigger: CCTTTGCCCACGGAACCGGCAGAGCGAGAGCCCAGA...AGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp ACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTCTGGGCTCTCGCTCTaGCGGTTCCGTGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: TGQGGAGQGLAGILHREVSGLSL*RFRGQR
Trigger: CCTTTGCCCACGGAACCGGCAGAGCGAGAGCCCAGA...GACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGTGGGGGCCTCCACGCTaGCACCTGACTCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GGAGQGLAGILHREVCSRWGPPR*HLTPSR
Trigger: CCTGGAAGGAGTCAGGTGGCAGCGTGGAGGCCCCCA...CCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGTGGGGGCCTCCACGCTaGCACCTGACTCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GRSRAGSGRNPPQGSLFQWGPPR*HLTPSR
Trigger: CCTGGAAGGAGTCAGGTGGCAGCGTGGAGGCCCCCA...CTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp CGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGCACCACTGGCCAGGCTaGTCTGGCACCCAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: RSGRSRAGSGRNPPQGSLHHWPG*SGTQRG
Trigger: ACCTCTCTGGGTGCCAGAGCAGCCTGGCCAGTGGTG...CAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp CCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGAGCAGCTGGAGGGGCCTaGTGGAGCTGCGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PGRVWQESSTGKSVPGTRAAGGA*WSCVSS
Trigger: GCTGCTGACGCAGCTCCAGCAGGCCCCTCCAGCTGC...TCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGGAGGGGGTGGCGGATaGAGACAGCTCCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GRSRAGSGRNPPQGSLFQGGGGG*RQLPRR
Trigger: TCTCCTGGGGAGCTGTCTGCATCCGCCACCCCCTCC...CTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTGCTGAGGGAGCCACGTaGCCTGGCTGGGGATGCACC +
Preference number: 4 (lower is better)
Translates to: VREEPGRVWQESSTGKSVAEGAT*PGWGCT
Trigger: GGTGCATCCCCAGCCAGGGCACGTGGCTCCCTCAGC...AACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTTCCCGCTGCCGAAGATaGTGTCGGCCATGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: PVREEPGRVWQESSTGKSSRCRR*CRPWLG
Trigger: TCCGAGCCATGGCCGACACCATCTTCGGCAGCGGGA...AGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp ACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTCCCGCTGCCGAAGATaGTGTCGGCCATGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: TGQGGAGQGLAGILHREVSRCRR*CRPWLG
Trigger: TCCGAGCCATGGCCGACACCATCTTCGGCAGCGGGA...GACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTTCCCGCTGCCGAAGATaGTGTCGGCCATGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: DRSGRSRAGSGRNPPQGSSRCRR*CRPWLG
Trigger: TCCGAGCCATGGCCGACACCATCTTCGGCAGCGGGA...ACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp ACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCAGCCGCTCTGCCCTCTaGATGACCTGCAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: TGQGGAGQGLAGILHREVSRSAL*MTCRMA
Trigger: GGCCATCCTGCAGGTCATCCAGAGGGCAGAGCGGCT...GACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CCCAGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGAGCCGCTCTGCCCTCTaGATGACCTGCAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: PSLERRPFQTQEPGVWGRSRSAL*MTCRMA
Trigger: GGCCATCCTGCAGGTCATCCAGAGGGCAGAGCGGCT...CCTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCCGCAGAGCAGACACTaGGACAGGCCGTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: DRSGRSRAGSGRNPPQGSPQSRH*DRPFPI
Trigger: GATGGGGAACGGCCTGTCCCAGTGTCTGCTCTGCGG...ACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTGCTCTGCCGGTTCCGTaGGCAAAGGTCGGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: DRSGRSRAGSGRNPPQGSALPVP*AKVGSG
Trigger: CCCACTTCCGACCTTTGCCCACGGAACCGGCAGAGC...ACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp ACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCGCTCTGCCGGTTCCGTaGGCAAAGGTCGGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: TGQGGAGQGLAGILHREVALPVP*AKVGSG
Trigger: CCCACTTCCGACCTTTGCCCACGGAACCGGCAGAGC...GACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCAGGTGGCCCGGCGGGTaGGTGAACCCCATCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GTELGRQTAPNTGLLSHGRWPGG*VNPILG
Trigger: CCCCAGGATGGGGTTCACCCACCCGCCGGGCCACCT...GCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACAGGTGGCCCGGCGGGTaGGTGAACCCCATCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GRVWQESSTGKSVPGTRHRWPGG*VNPILG
Trigger: CCCCAGGATGGGGTTCACCCACCCGCCGGGCCACCT...GTGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCTCCCCGTCTCACCACTaGCCAGGCTGCTCTGGCACC +
Preference number: 4 (lower is better)
Translates to: EEPGRVWQESSTGKSVPGSPSHH*PGCSGT
Trigger: GGTGCCAGAGCAGCCTGGCCAGTGGTGAGACGGGGA...GCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGTCCCCGTCTCACCACTaGCCAGGCTGCTCTGGCACC +
Preference number: 4 (lower is better)
Translates to: AGQGLAGILHREVCSRHQSPSHH*PGCSGT
Trigger: GGTGCCAGAGCAGCCTGGCCAGTGGTGAGACGGGGA...CTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACGCTGGAGGGGCCTGCTaGAGCTGCGTCAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: GRVWQESSTGKSVPGTRHAGGAC*SCVSSG
Trigger: CCCGCTGCTGACGCAGCTCCAGCAGGCCCCTCCAGC...GTGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCGAGCCGGGCAGGGTCTaGCAGGAATCCTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: EPGRVWQESSTGKSVPGTEPGRV*QESSTG
Trigger: CCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTC...GGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGAGCCGGGCAGGGTCTaGCAGGAATCCTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: GRSRAGSGRNPPQGSLFQEPGRV*QESSTG
Trigger: CCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTC...CTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACGGGAGCCACGTGCCCTaGCTGGGGATGCACCTGAAC +
Preference number: 4 (lower is better)
Translates to: GAGQGLAGILHREVCSRHGSHVP*LGMHLN
Trigger: GTTCAGGTGCATCCCCAGCCAGGGCACGTGGCTCCC...GTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGGGGAGCCACGTGCCCTaGCTGGGGATGCACCTGAAC +
Preference number: 4 (lower is better)
Translates to: AGQGLAGILHREVCSRHQGSHVP*LGMHLN
Trigger: GTTCAGGTGCATCCCCAGCCAGGGCACGTGGCTCCC...CTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCGCACCCGGCTGGGGGTaGGGAGTCACATCGGGAACA +
Preference number: 4 (lower is better)
Translates to: EPGRVWQESSTGKSVPGTAPGWG*GVTSGT
Trigger: TGTTCCCGATGTGACTCCCCACCCCCAGCCGGGTGC...GGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000536489.6
ENST00000618002.4
CDS-3UTR TCA 90 bp GTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCGCCTTTCCGGTCCCTaGCCCCAGTGGATGGGAGTC +
Preference number: 4 (lower is better)
Translates to: VREEPGRVWQESSTGKSVRLSGP*PQWMGV
Trigger: GACTCCCATCCACTGGGGTCAGGGACCGGAAAGGCG...AACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTCCACGCTGCCACCTaGCTCCTTCCAGGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: DRSGRSRAGSGRNPPQGSLHAAT*LLPGFV
Trigger: GACAAACCCTGGAAGGAGTCAGGTGGCAGCGTGGAG...ACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp ACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCCTCCACGCTGCCACCTaGCTCCTTCCAGGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: TGQGGAGQGLAGILHREVLHAAT*LLPGFV
Trigger: GACAAACCCTGGAAGGAGTCAGGTGGCAGCGTGGAG...GACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp AGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGAGGAATAAGGTCGGGGGCTaGGGGCAGTGGTTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SLERRPFQTQEPGVWGRRNKVGG*GQWLEG
Trigger: CCCCTCCAACCACTGCCCTCAGCCCCCGACCTTATT...CCTCCTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp AGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAACCGGGCGGCCCCTCTaGCACTGCATGTGGGAAACC +
Preference number: 4 (lower is better)
Translates to: SRAGSGRNPPQGSLFQAPTGRPL*HCMWET
Trigger: GGTTTCCCACATGCAGTGTCAGAGGGGCCGCCCGGT...TGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTACCGGGCGGCCCCTCTaGCACTGCATGTGGGAAACC +
Preference number: 4 (lower is better)
Translates to: VREEPGRVWQESSTGKSVTGRPL*HCMWET
Trigger: GGTTTCCCACATGCAGTGTCAGAGGGGCCGCCCGGT...AACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTGGCTGGGGATGCACCTaGACGCTGCTCTTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: DRSGRSRAGSGRNPPQGSGWGCT*TLLFSK
Trigger: CTTGCTGAAGAGCAGCGTTCAGGTGCATCCCCAGCC...ACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCCACCGTTGTCGGGGGTaGCCCGAGGTGTTCCAGATG +
Preference number: 4 (lower is better)
Translates to: EEPGRVWQESSTGKSVPGHRCRG*PEVFQM
Trigger: CATCTGGAACACCTCGGGTCACCCCCGACAACGGTG...GCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
CDS-3UTR GCA 90 bp CGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGGCTCGAAGGGCAAGCTaGCGGTCATTGGGGCAAACC +
Preference number: 4 (lower is better)
Translates to: RSGRSRAGSGRNPPQGSLARRAS*RSLGQT
Trigger: GGTTTGCCCCAATGACCGGCAGCTTGCCCTTCGAGC...CAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp ACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCGCTCGAAGGGCAAGCTaGCGGTCATTGGGGCAAACC +
Preference number: 4 (lower is better)
Translates to: TGQGGAGQGLAGILHREVARRAS*RSLGQT
Trigger: GGTTTGCCCCAATGACCGGCAGCTTGCCCTTCGAGC...GACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTGCCGGGCTGAGGTGCTaGTTCCTCCTCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GQGGAGQGLAGILHREVCAGLRC*FLLCFS
Trigger: GGAGAAGCAGAGGAGGAAGCAGCACCTCAGCCCGGC...ACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp CAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCGCCGGGCTGAGGTGCTaGTTCCTCCTCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QGGAGQGLAGILHREVCSAGLRC*FLLCFS
Trigger: GGAGAAGCAGAGGAGGAAGCAGCACCTCAGCCCGGC...GGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTGGGGTCTGGAGGGCGTGCCGGGCTGAGGTGCTaGTTCCTCCTCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GEVPGRQRSGTTLGSGGRAGLRC*FLLCFS
Trigger: GGAGAAGCAGAGGAGGAAGCAGCACCTCAGCCCGGC...ACGCCCTCCAGACCCCAGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR GCA 90 bp GGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACGCCGGGCTGAGGTGCTaGTTCCTCCTCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GAGQGLAGILHREVCSRHAGLRC*FLLCFS
Trigger: GGAGAAGCAGAGGAGGAAGCAGCACCTCAGCCCGGC...GTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGGCCGGGCTGAGGTGCTaGTTCCTCCTCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GGAGQGLAGILHREVCSRAGLRC*FLLCFS
Trigger: GGAGAAGCAGAGGAGGAAGCAGCACCTCAGCCCGGC...CCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp TCCCAGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGTCCGCCGGGCTGAGGTaGTGCTTCCTCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SQLGEKALPDPGTRGLGQSAGLR*CFLLCF
Trigger: GAAGCAGAGGAGGAAGCAGCACCTCAGCCCGGCGGA...CTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCGCCGGGCTGAGGTaGTGCTTCCTCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GQGGAGQGLAGILHREVCSAGLR*CFLLCF
Trigger: GAAGCAGAGGAGGAAGCAGCACCTCAGCCCGGCGGA...ACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp CAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCTCCGCCGGGCTGAGGTaGTGCTTCCTCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: QGGAGQGLAGILHREVCSSAGLR*CFLLCF
Trigger: GAAGCAGAGGAGGAAGCAGCACCTCAGCCCGGCGGA...GGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCTCCGCCGGGCTGAGGTaGTGCTTCCTCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: EPGRVWQESSTGKSVPGTSAGLR*CFLLCF
Trigger: GAAGCAGAGGAGGAAGCAGCACCTCAGCCCGGCGGA...GGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGTCCGCCGGGCTGAGGTaGTGCTTCCTCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GRSRAGSGRNPPQGSLFQSAGLR*CFLLCF
Trigger: GAAGCAGAGGAGGAAGCAGCACCTCAGCCCGGCGGA...CTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTGGGGTCTGGAGGGCGTTCCGCCGGGCTGAGGTaGTGCTTCCTCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GEVPGRQRSGTTLGSGGRSAGLR*CFLLCF
Trigger: GAAGCAGAGGAGGAAGCAGCACCTCAGCCCGGCGGA...ACGCCCTCCAGACCCCAGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR GCA 90 bp GCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGGCCCTCTGGATGACCTaGAGGATGGCCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: AGQGLAGILHREVCSRHQALWMT*RMASTS
Trigger: GGAGGTGGAGGCCATCCTGCAGGTCATCCAGAGGGC...CTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCGCCCTCTGGATGACCTaGAGGATGGCCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: EPGRVWQESSTGKSVPGTALWMT*RMASTS
Trigger: GGAGGTGGAGGCCATCCTGCAGGTCATCCAGAGGGC...GGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCGACGTCGAGCCGCTCTaGCCTCTGGATGACCTGCAG +
Preference number: 4 (lower is better)
Translates to: EEPGRVWQESSTGKSVPGDVEPL*PLDDLQ
Trigger: CTGCAGGTCATCCAGAGGGCAGAGCGGCTCGACGTC...GCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGGACGTCGAGCCGCTCTaGCCTCTGGATGACCTGCAG +
Preference number: 4 (lower is better)
Translates to: AGQGLAGILHREVCSRHQDVEPL*PLDDLQ
Trigger: CTGCAGGTCATCCAGAGGGCAGAGCGGCTCGACGTC...CTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGGACGTCGAGCCGCTCTaGCCTCTGGATGACCTGCAG +
Preference number: 4 (lower is better)
Translates to: GGAGQGLAGILHREVCSRDVEPL*PLDDLQ
Trigger: CTGCAGGTCATCCAGAGGGCAGAGCGGCTCGACGTC...CCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp AGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCACGCCCGATTCTCTGCTaGTCCAGGACGTCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: SRAGSGRNPPQGSLFQAPRPILC*SRTSSR
Trigger: GCGGCTCGACGTCCTGGAGCAGCAGAGAATCGGGCG...TGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp TCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCGCCCGATTCTCTGCTaGTCCAGGACGTCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: SGRSRAGSGRNPPQGSLFRPILC*SRTSSR
Trigger: GCGGCTCGACGTCCTGGAGCAGCAGAGAATCGGGCG...GAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGAGCCGCCCGATTCTCTaGTGCTCCAGGACGTCGAGC +
Preference number: 4 (lower is better)
Translates to: GGAGQGLAGILHREVCSRSRPIL*CSRTSS
Trigger: GCTCGACGTCCTGGAGCAGCAGAGAATCGGGCGGCT...CCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACAGCCGCCCGATTCTCTaGTGCTCCAGGACGTCGAGC +
Preference number: 4 (lower is better)
Translates to: GAGQGLAGILHREVCSRHSRPIL*CSRTSS
Trigger: GCTCGACGTCCTGGAGCAGCAGAGAATCGGGCGGCT...GTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCTGGGCTCTCGCTCTaGCGGTTCCGTGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: GQGGAGQGLAGILHREVCSGLSL*RFRGQR
Trigger: CCTTTGCCCACGGAACCGGCAGAGCGAGAGCCCAGA...ACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCTCTGGGCTCTCGCTCTaGCGGTTCCGTGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: EEPGRVWQESSTGKSVPGSGLSL*RFRGQR
Trigger: CCTTTGCCCACGGAACCGGCAGAGCGAGAGCCCAGA...GCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp CCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGGGCCCACGTGTAGATaGGGCTGGTCTCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: PVREEPGRVWQESSTGKSGPTCR*GWSQSF
Trigger: GAAGCTCTGAGACCAGCCGCATCTACACGTGGGCCC...AGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp CGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGGGGCCCACGTGTAGATaGGGCTGGTCTCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: RSGRSRAGSGRNPPQGSLGPTCR*GWSQSF
Trigger: GAAGCTCTGAGACCAGCCGCATCTACACGTGGGCCC...CAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCACTGGCCAGGCTaGTCTGGCACCCAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: GGAGQGLAGILHREVCSRHHWPG*SGTQRG
Trigger: ACCTCTCTGGGTGCCAGAGCAGCCTGGCCAGTGGTG...CCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp CAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCCACCACTGGCCAGGCTaGTCTGGCACCCAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: QGGAGQGLAGILHREVCSHHWPG*SGTQRG
Trigger: ACCTCTCTGGGTGCCAGAGCAGCCTGGCCAGTGGTG...GGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTCACCACTGGCCAGGCTaGTCTGGCACCCAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: GQGGAGQGLAGILHREVCHHWPG*SGTQRG
Trigger: ACCTCTCTGGGTGCCAGAGCAGCCTGGCCAGTGGTG...ACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCCACCACTGGCCAGGCTaGTCTGGCACCCAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: EPGRVWQESSTGKSVPGTHHWPG*SGTQRG
Trigger: ACCTCTCTGGGTGCCAGAGCAGCCTGGCCAGTGGTG...GGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCACCACTGGCCAGGCTaGTCTGGCACCCAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: GAGQGLAGILHREVCSRHHHWPG*SGTQRG
Trigger: ACCTCTCTGGGTGCCAGAGCAGCCTGGCCAGTGGTG...GTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp TCCCAGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGCACCACTGGCCAGGCTaGTCTGGCACCCAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: SQLGEKALPDPGTRGLGQHHWPG*SGTQRG
Trigger: ACCTCTCTGGGTGCCAGAGCAGCCTGGCCAGTGGTG...CTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCTGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp ATAGCAACGGAGATAGCCCCACCGGGCGGCCCCTCTGACACTGCATGTGGGAAAGCAGCTGGAGGGGCCTaGTGGAGCTGCGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: IATEIAPPGGPSDTACGKAAGGA*WSCVSS
Trigger: GCTGCTGACGCAGCTCCAGCAGGCCCCTCCAGCTGC...TTTCCCACATGCAGTGTCAGAGGGGCCGCCCGGTGGGGCTATCTCCGTTGCTAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp CCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGAGGAGGGGGTGGCGGATaGAGACAGCTCCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: PGRVWQESSTGKSVPGTRGGGGG*RQLPRR
Trigger: TCTCCTGGGGAGCTGTCTGCATCCGCCACCCCCTCC...TCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTGGAGGGGGTGGCGGATaGAGACAGCTCCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: VREEPGRVWQESSTGKSVGGGGG*RQLPRR
Trigger: TCTCCTGGGGAGCTGTCTGCATCCGCCACCCCCTCC...AACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTGCACCCGGCTGGGGGTaGGGAGTCACATCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: DRSGRSRAGSGRNPPQGSAPGWG*GVTSFP
Trigger: TGGAAAAGATGTGACTCCCCACCCCCAGCCGGGTGC...ACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323434.12
ENST00000331302.12
CDS-3UTR CCA 90 bp TCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCAGATGGTGTCGGCCATaGCTCGGAGCACCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: SGRSRAGSGRNPPQGSLFRWCRP*LGAPGW
Trigger: CCAGCCGGGTGCTCCGAGCCATGGCCGACACCATCT...GAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTGGGGTCTGGAGGGCGTAGCCCGTCTGCAGCTTaGCTCGAAGGGCAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GEVPGRQRSGTTLGSGGRSPSAA*LEGQAA
Trigger: GGCAGCTTGCCCTTCGAGCCAAGCTGCAGACGGGCT...ACGCCCTCCAGACCCCAGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR CCA 90 bp GCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGAGCCCGTCTGCAGCTTaGCTCGAAGGGCAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: AGQGLAGILHREVCSRHQSPSAA*LEGQAA
Trigger: GGCAGCTTGCCCTTCGAGCCAAGCTGCAGACGGGCT...CTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGAGGAGCCGCTCTGCCCTCTaGATGACCTGCAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: SLERRPFQTQEPGVWGRRSRSAL*MTCRMA
Trigger: GGCCATCCTGCAGGTCATCCAGAGGGCAGAGCGGCT...CCTCCTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGCCGCTCTGCCCTCTaGATGACCTGCAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: EPGRVWQESSTGKSVPGTSRSAL*MTCRMA
Trigger: GGCCATCCTGCAGGTCATCCAGAGGGCAGAGCGGCT...GGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTGGGGTCTGGAGGGCGTAGCCGCTCTGCCCTCTaGATGACCTGCAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: GEVPGRQRSGTTLGSGGRSRSAL*MTCRMA
Trigger: GGCCATCCTGCAGGTCATCCAGAGGGCAGAGCGGCT...ACGCCCTCCAGACCCCAGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR CCA 90 bp GGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTCCGCAGAGCAGACACTaGGACAGGCCGTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: GQGGAGQGLAGILHREVCPQSRH*DRPFPI
Trigger: GATGGGGAACGGCCTGTCCCAGTGTCTGCTCTGCGG...ACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCCCGCAGAGCAGACACTaGGACAGGCCGTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: EEPGRVWQESSTGKSVPGPQSRH*DRPFPI
Trigger: GATGGGGAACGGCCTGTCCCAGTGTCTGCTCTGCGG...GCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGGCAAAGGTCGGAAGTaGGGGTCATCAGCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: PVREEPGRVWQESSTGKSGKGRK*GSSARP
Trigger: TGGCCGAGCTGATGACCCCCACTTCCGACCTTTGCC...AGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTGAGCCGGGCAGGGTCTaGCAGGAATCCTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: VREEPGRVWQESSTGKSVEPGRV*QESSTG
Trigger: CCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTC...AACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGAGTGGTTGGAGGGGGTaGCGGATGCAGACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: AGQGLAGILHREVCSRHQSGWRG*RMQTAP
Trigger: GGGAGCTGTCTGCATCCGCCACCCCCTCCAACCACT...CTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGAGGGAGCCACGTGCCCTaGCTGGGGATGCACCTGAAC +
Preference number: 4 (lower is better)
Translates to: PGRVWQESSTGKSVPGTRGSHVP*LGMHLN
Trigger: GTTCAGGTGCATCCCCAGCCAGGGCACGTGGCTCCC...TCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTGGGAGCCACGTGCCCTaGCTGGGGATGCACCTGAAC +
Preference number: 4 (lower is better)
Translates to: VREEPGRVWQESSTGKSVGSHVP*LGMHLN
Trigger: GTTCAGGTGCATCCCCAGCCAGGGCACGTGGCTCCC...AACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACCGTTTCACTGCGGTCCTaGGCCAGCCCACGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: AGSGRNPPQGSLFQAPDTVSLRS*ASPREG
Trigger: CCCCTCCCGTGGGCTGGCCCAGGACCGCAGTGAAAC...GGTGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp CCCAGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGTTGGGGCAAACCCACTaGTCATTCCCGCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: PSLERRPFQTQEPGVWGRLGQTH*SFPLPK
Trigger: CTTCGGCAGCGGGAATGATCAGTGGGTTTGCCCCAA...CCTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGCTCCACGCTGCCACCTaGCTCCTTCCAGGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: GRSRAGSGRNPPQGSLFQLHAAT*LLPGFV
Trigger: GACAAACCCTGGAAGGAGTCAGGTGGCAGCGTGGAG...CTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp CAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCCTCCACGCTGCCACCTaGCTCCTTCCAGGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: QGGAGQGLAGILHREVCSLHAAT*LLPGFV
Trigger: GACAAACCCTGGAAGGAGTCAGGTGGCAGCGTGGAG...GGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGCTCCACGCTGCCACCTaGCTCCTTCCAGGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: AGQGLAGILHREVCSRHQLHAAT*LLPGFV
Trigger: GACAAACCCTGGAAGGAGTCAGGTGGCAGCGTGGAG...CTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTGCGGTGGCTCACACCGGCCCGGCGGGTGGGTaGACCCCATCCTGGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GHEGIQRNLIGLGAVAHTGPAGG*TPSWGP
Trigger: AGGCCCCCAGGATGGGGTTCACCCACCCGCCGGGCC...GGTGTGAGCCACCGCACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCCAACAGGGTGTCTGGTaGGGGCACAAGGACCGGTCA +
Preference number: 4 (lower is better)
Translates to: EEPGRVWQESSTGKSVPGQQGVW*GHKDRS
Trigger: TGACCGGTCCTTGTGCCCTCACCAGACACCCTGTTG...GCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp TCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCAATAAGGTCGGGGGCTaGGGGCAGTGGTTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SGRSRAGSGRNPPQGSLFNKVGG*GQWLEG
Trigger: CCCCTCCAACCACTGCCCTCAGCCCCCGACCTTATT...GAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCACCGGGCGGCCCCTCTaGCACTGCATGTGGGAAACC +
Preference number: 4 (lower is better)
Translates to: GTELGRQTAPNTGLLSHGTGRPL*HCMWET
Trigger: GGTTTCCCACATGCAGTGTCAGAGGGGCCGCCCGGT...GCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp CCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTTCACTGCTCTGGCTCTaGTGCTCACCTCTAAGGGGC +
Preference number: 4 (lower is better)
Translates to: PVREEPGRVWQESSTGKSSLLWL*CSPLRG
Trigger: GCCCCTTAGAGGTGAGCATCAGAGCCAGAGCAGTGA...AGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTGGCTGGGGATGCACCTaGACGCTGCTCTTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: GQGGAGQGLAGILHREVCGWGCT*TLLFSK
Trigger: CTTGCTGAAGAGCAGCGTTCAGGTGCATCCCCAGCC...ACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp CCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACCGTTGTCGGGGGTaGCCCGAGGTGTTCCAGATG +
Preference number: 4 (lower is better)
Translates to: PGRVWQESSTGKSVPGTRHRCRG*PEVFQM
Trigger: CATCTGGAACACCTCGGGTCACCCCCGACAACGGTG...TCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
CDS-3UTR GCA 90 bp GGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGGCTCGAAGGGCAAGCTaGCGGTCATTGGGGCAAACC +
Preference number: 4 (lower is better)
Translates to: GGAGQGLAGILHREVCSRARRAS*RSLGQT
Trigger: GGTTTGCCCCAATGACCGGCAGCTTGCCCTTCGAGC...CCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACGCTCGAAGGGCAAGCTaGCGGTCATTGGGGCAAACC +
Preference number: 4 (lower is better)
Translates to: GAGQGLAGILHREVCSRHARRAS*RSLGQT
Trigger: GGTTTGCCCCAATGACCGGCAGCTTGCCCTTCGAGC...GTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTGGGGTCTGGAGGGCGCTCGAAGGGCAAGCTaGCGGTCATTGGGGCAAACC +
Preference number: 4 (lower is better)
Translates to: EGKFPEGSAQELLWGLEGARRAS*RSLGQT
Trigger: GGTTTGCCCCAATGACCGGCAGCTTGCCCTTCGAGC...GCCCTCCAGACCCCAGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR GCA 90 bp AGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGCCGGGCTGAGGTGCTaGTTCCTCCTCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SRAGSGRNPPQGSLFQAPAGLRC*FLLCFS
Trigger: GGAGAAGCAGAGGAGGAAGCAGCACCTCAGCCCGGC...TGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp CGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACGCCGGGCTGAGGTGCTaGTTCCTCCTCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RAGSGRNPPQGSLFQAPDAGLRC*FLLCFS
Trigger: GGAGAAGCAGAGGAGGAAGCAGCACCTCAGCCCGGC...GTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp AGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGCCCTCTGGATGACCTaGAGGATGGCCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: SRAGSGRNPPQGSLFQAPALWMT*RMASTS
Trigger: GGAGGTGGAGGCCATCCTGCAGGTCATCCAGAGGGC...TGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTGCCCTCTGGATGACCTaGAGGATGGCCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: VREEPGRVWQESSTGKSVALWMT*RMASTS
Trigger: GGAGGTGGAGGCCATCCTGCAGGTCATCCAGAGGGC...AACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp TCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCGCCCTCTGGATGACCTaGAGGATGGCCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: SGRSRAGSGRNPPQGSLFALWMT*RMASTS
Trigger: GGAGGTGGAGGCCATCCTGCAGGTCATCCAGAGGGC...GAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GAGCTGAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTGGGGTCTGGGACGTCGAGCCGCTCTaGCCTCTGGATGACCTGCAG +
Preference number: 4 (lower is better)
Translates to: ELRGSSRKAALRNYSGVWDVEPL*PLDDLQ
Trigger: CTGCAGGTCATCCAGAGGGCAGAGCGGCTCGACGTC...CCAGACCCCAGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTCAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR GCA 90 bp AGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACGTCGAGCCGCTCTaGCCTCTGGATGACCTGCAG +
Preference number: 4 (lower is better)
Translates to: SRAGSGRNPPQGSLFQAPDVEPL*PLDDLQ
Trigger: CTGCAGGTCATCCAGAGGGCAGAGCGGCTCGACGTC...TGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACCGCCCGATTCTCTGCTaGTCCAGGACGTCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: GRVWQESSTGKSVPGTRHRPILC*SRTSSR
Trigger: GCGGCTCGACGTCCTGGAGCAGCAGAGAATCGGGCG...GTGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp CGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACAGCCGCCCGATTCTCTaGTGCTCCAGGACGTCGAGC +
Preference number: 4 (lower is better)
Translates to: RAGSGRNPPQGSLFQAPDSRPIL*CSRTSS
Trigger: GCTCGACGTCCTGGAGCAGCAGAGAATCGGGCGGCT...GTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp CCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGAAGCCGCCCGATTCTCTaGTGCTCCAGGACGTCGAGC +
Preference number: 4 (lower is better)
Translates to: PGRVWQESSTGKSVPGTRSRPIL*CSRTSS
Trigger: GCTCGACGTCCTGGAGCAGCAGAGAATCGGGCGGCT...TCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GAGCTGAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTGGGGTCTGGAGCCGCCCGATTCTCTaGTGCTCCAGGACGTCGAGC +
Preference number: 4 (lower is better)
Translates to: ELRGSSRKAALRNYSGVWSRPIL*CSRTSS
Trigger: GCTCGACGTCCTGGAGCAGCAGAGAATCGGGCGGCT...CCAGACCCCAGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTCAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR GCA 90 bp GTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTTCTGGGCTCTCGCTCTaGCGGTTCCGTGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: VREEPGRVWQESSTGKSVSGLSL*RFRGQR
Trigger: CCTTTGCCCACGGAACCGGCAGAGCGAGAGCCCAGA...AACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp TCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCTCTGGGCTCTCGCTCTaGCGGTTCCGTGGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: SGRSRAGSGRNPPQGSLFSGLSL*RFRGQR
Trigger: CCTTTGCCCACGGAACCGGCAGAGCGAGAGCCCAGA...GAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTGGGCCCACGTGTAGATaGGGCTGGTCTCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: GQGGAGQGLAGILHREVCGPTCR*GWSQSF
Trigger: GAAGCTCTGAGACCAGCCGCATCTACACGTGGGCCC...ACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp CAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCGGGCCCACGTGTAGATaGGGCTGGTCTCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: QGGAGQGLAGILHREVCSGPTCR*GWSQSF
Trigger: GAAGCTCTGAGACCAGCCGCATCTACACGTGGGCCC...GGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACTGGGGGCCTCCACGCTaGCACCTGACTCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GRVWQESSTGKSVPGTRHWGPPR*HLTPSR
Trigger: CCTGGAAGGAGTCAGGTGGCAGCGTGGAGGCCCCCA...GTGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACATGGGGGCCTCCACGCTaGCACCTGACTCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GQGLAGILHREVCSRHQTWGPPR*HLTPSR
Trigger: CCTGGAAGGAGTCAGGTGGCAGCGTGGAGGCCCCCA...TGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCTGGGGGCCTCCACGCTaGCACCTGACTCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: GTELGRQTAPNTGLLSHGWGPPR*HLTPSR
Trigger: CCTGGAAGGAGTCAGGTGGCAGCGTGGAGGCCCCCA...GCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACAGGAGGGGGTGGCGGATaGAGACAGCTCCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: GQGLAGILHREVCSRHQTGGGGG*RQLPRR
Trigger: TCTCCTGGGGAGCTGTCTGCATCCGCCACCCCCTCC...TGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACCAGATGGTGTCGGCCATaGCTCGGAGCACCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: AGSGRNPPQGSLFQAPDTRWCRP*LGAPGW
Trigger: CCAGCCGGGTGCTCCGAGCCATGGCCGACACCATCT...GGTGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCATCCCGCTGCCGAAGATaGTGTCGGCCATGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: SRAGSGRNPPQGSLFQAPSRCRR*CRPWLG
Trigger: TCCGAGCCATGGCCGACACCATCTTCGGCAGCGGGA...TGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTAGCCCGTCTGCAGCTTaGCTCGAAGGGCAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: VREEPGRVWQESSTGKSVSPSAA*LEGQAA
Trigger: GGCAGCTTGCCCTTCGAGCCAAGCTGCAGACGGGCT...AACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGAAGCCCGTCTGCAGCTTaGCTCGAAGGGCAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: PGRVWQESSTGKSVPGTRSPSAA*LEGQAA
Trigger: GGCAGCTTGCCCTTCGAGCCAAGCTGCAGACGGGCT...TCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCAAGCCCGTCTGCAGCTTaGCTCGAAGGGCAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: RSRAGSGRNPPQGSLFQASPSAA*LEGQAA
Trigger: GGCAGCTTGCCCTTCGAGCCAAGCTGCAGACGGGCT...TGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACAGCCGCTCTGCCCTCTaGATGACCTGCAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: RAGSGRNPPQGSLFQAPDSRSAL*MTCRMA
Trigger: GGCCATCCTGCAGGTCATCCAGAGGGCAGAGCGGCT...GTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTTCACATTCCGCCTCATaGTCTCCAGCCGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: PVREEPGRVWQESSTGKSSHSAS*SPAAPP
Trigger: TGGTGGAGCGGCTGGAGACCATGAGGCGGAATGTGA...AGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTCACATTCCGCCTCATaGTCTCCAGCCGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: RSGRSRAGSGRNPPQGSLSHSAS*SPAAPP
Trigger: TGGTGGAGCGGCTGGAGACCATGAGGCGGAATGTGA...CAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCGCAGAGCAGACACTaGGACAGGCCGTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: RSRAGSGRNPPQGSLFQAPQSRH*DRPFPI
Trigger: GATGGGGAACGGCCTGTCCCAGTGTCTGCTCTGCGG...TGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCACCGCAGAGCAGACACTaGGACAGGCCGTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: SRAGSGRNPPQGSLFQAPPQSRH*DRPFPI
Trigger: GATGGGGAACGGCCTGTCCCAGTGTCTGCTCTGCGG...TGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGGCAAAGGTCGGAAGTaGGGGTCATCAGCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: GRSRAGSGRNPPQGSLFQGKGRK*GSSARP
Trigger: TGGCCGAGCTGATGACCCCCACTTCCGACCTTTGCC...CTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCAGCTCTGCCGGTTCCGTaGGCAAAGGTCGGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: RSRAGSGRNPPQGSLFQAALPVP*AKVGSG
Trigger: CCCACTTCCGACCTTTGCCCACGGAACCGGCAGAGC...TGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTTGGTCTCAGAGCTTCTaGGCTCTCGCTCTGCCGGTT +
Preference number: 4 (lower is better)
Translates to: DRSGRSRAGSGRNPPQGSWSQSF*ALALPV
Trigger: AACCGGCAGAGCGAGAGCCCAGAAGCTCTGAGACCA...ACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGGAGGTGGCCCGGCGGGTaGGTGAACCCCATCCTGGGG +
Preference number: 4 (lower is better)
Translates to: RQTAPNTGLLSHGQQGVWRWPGG*VNPILG
Trigger: CCCCAGGATGGGGTTCACCCACCCGCCGGGCCACCT...CCAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGAGGTGGCCCGGCGGGTaGGTGAACCCCATCCTGGGG +
Preference number: 4 (lower is better)
Translates to: EADGSQHWFVESWPTGCLRWPGG*VNPILG
Trigger: CCCCAGGATGGGGTTCACCCACCCGCCGGGCCACCT...CAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGGGCTGGAGGGGCCTGCTaGAGCTGCGTCAGCAGCGGG +
Preference number: 4 (lower is better)
Translates to: RQTAPNTGLLSHGQQGVWAGGAC*SCVSSG
Trigger: CCCGCTGCTGACGCAGCTCCAGCAGGCCCCTCCAGC...CCAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACGAGCCGGGCAGGGTCTaGCAGGAATCCTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: GRVWQESSTGKSVPGTRHEPGRV*QESSTG
Trigger: CCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTC...GTGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp ATAGCAACGGAGATAGCCCCACCGGGCGGCCCCTCTGACACTGCATGTGGGAAAGCTGAGGGCAGTGGTTaGAGGGGGTGGCGGATGCAG +
Preference number: 4 (lower is better)
Translates to: IATEIAPPGGPSDTACGKAEGSG*RGWRMQ
Trigger: CTGCATCCGCCACCCCCTCCAACCACTGCCCTCAGC...TTTCCCACATGCAGTGTCAGAGGGGCCGCCCGGTGGGGCTATCTCCGTTGCTAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGGCTGAGGGCAGTGGTTaGAGGGGGTGGCGGATGCAG +
Preference number: 4 (lower is better)
Translates to: AGEADGSQHWFVESWPTGAEGSG*RGWRMQ
Trigger: CTGCATCCGCCACCCCCTCCAACCACTGCCCTCAGC...CCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGCAGGAGCTCCCAGCTTaGAGAGAAGGCCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: RSGRSRAGSGRNPPQGSLQELPA*REGPSR
Trigger: TCTGGAAGGGCCTTCTCTCCAAGCTGGGAGCTCCTG...CAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTTGGGGCAAACCCACTaGTCATTCCCGCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: GQGGAGQGLAGILHREVCLGQTH*SFPLPK
Trigger: CTTCGGCAGCGGGAATGATCAGTGGGTTTGCCCCAA...ACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCGCCTTTCCGGTCCCTaGCCCCAGTGGATGGGAGTC +
Preference number: 4 (lower is better)
Translates to: GEADGSQHWFVESWPTGCRLSGP*PQWMGV
Trigger: GACTCCCATCCACTGGGGTCAGGGACCGGAAAGGCG...ACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp AGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCACTCCACGCTGCCACCTaGCTCCTTCCAGGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: REEPGRVWQESSTGKSVPLHAAT*LLPGFV
Trigger: GACAAACCCTGGAAGGAGTCAGGTGGCAGCGTGGAG...TGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp CCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACTCCACGCTGCCACCTaGCTCCTTCCAGGGTTTGTC +
Preference number: 4 (lower is better)
Translates to: PGRVWQESSTGKSVPGTRLHAAT*LLPGFV
Trigger: GACAAACCCTGGAAGGAGTCAGGTGGCAGCGTGGAG...TCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp TCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAACAGGGTGTCTGGTaGGGGCACAAGGACCGGTCA +
Preference number: 4 (lower is better)
Translates to: SGRSRAGSGRNPPQGSLFQQGVW*GHKDRS
Trigger: TGACCGGTCCTTGTGCCCTCACCAGACACCCTGTTG...GAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGAATAAGGTCGGGGGCTaGGGGCAGTGGTTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: AGEADGSQHWFVESWPTGNKVGG*GQWLEG
Trigger: CCCCTCCAACCACTGCCCTCAGCCCCCGACCTTATT...CCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCTCACTGCTCTGGCTCTaGTGCTCACCTCTAAGGGGC +
Preference number: 4 (lower is better)
Translates to: EEPGRVWQESSTGKSVPGSLLWL*CSPLRG
Trigger: GCCCCTTAGAGGTGAGCATCAGAGCCAGAGCAGTGA...GCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp CCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTCCGAGGTGTTCCAGATaGGGAGCTGAATCACTGGGA +
Preference number: 4 (lower is better)
Translates to: PVREEPGRVWQESSTGKSPRCSR*GAESLG
Trigger: TCCCAGTGATTCAGCTCCTCATCTGGAACACCTCGG...AGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
CDS-3UTR TCA 90 bp ACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCCCGAGGTGTTCCAGATaGGGAGCTGAATCACTGGGA +
Preference number: 4 (lower is better)
Translates to: TGQGGAGQGLAGILHREVPRCSR*GAESLG
Trigger: TCCCAGTGATTCAGCTCCTCATCTGGAACACCTCGG...GACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
CDS-3UTR GCA 90 bp GACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTACTGATCATTCCCGCTaGCGAAGATGGTGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: DRSGRSRAGSGRNPPQGSTDHSR*RRWCRP
Trigger: TGGCCGACACCATCTTCGGCAGCGGGAATGATCAGT...ACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp CCCAGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGACTGATCATTCCCGCTaGCGAAGATGGTGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: PSLERRPFQTQEPGVWGRTDHSR*RRWCRP
Trigger: TGGCCGACACCATCTTCGGCAGCGGGAATGATCAGT...CCTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACCGCCGGGCTGAGGTGCTaGTTCCTCCTCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: AGSGRNPPQGSLFQAPDTAGLRC*FLLCFS
Trigger: GGAGAAGCAGAGGAGGAAGCAGCACCTCAGCCCGGC...GGTGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACCTCCGCCGGGCTGAGGTaGTGCTTCCTCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: AGSGRNPPQGSLFQAPDTSAGLR*CFLLCF
Trigger: GAAGCAGAGGAGGAAGCAGCACCTCAGCCCGGCGGA...GGTGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACGCCCTCTGGATGACCTaGAGGATGGCCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: GRVWQESSTGKSVPGTRHALWMT*RMASTS
Trigger: GGAGGTGGAGGCCATCCTGCAGGTCATCCAGAGGGC...GTGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACAGACGTCGAGCCGCTCTaGCCTCTGGATGACCTGCAG +
Preference number: 4 (lower is better)
Translates to: GQGLAGILHREVCSRHQTDVEPL*PLDDLQ
Trigger: CTGCAGGTCATCCAGAGGGCAGAGCGGCTCGACGTC...TGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp AAGGGGTGCAGAAAGGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTGACGTCGAGCCGCTCTaGCCTCTGGATGACCTGCAG +
Preference number: 4 (lower is better)
Translates to: KGCRKALSWGGRRLPTLVDVEPL*PLDDLQ
Trigger: CTGCAGGTCATCCAGAGGGCAGAGCGGCTCGACGTC...AACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCCTTTCTGCACCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGGACGTCGAGCCGCTCTaGCCTCTGGATGACCTGCAG +
Preference number: 4 (lower is better)
Translates to: AGEADGSQHWFVESWPTGDVEPL*PLDDLQ
Trigger: CTGCAGGTCATCCAGAGGGCAGAGCGGCTCGACGTC...CCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACAAGCCGCCCGATTCTCTaGTGCTCCAGGACGTCGAGC +
Preference number: 4 (lower is better)
Translates to: GQGLAGILHREVCSRHQTSRPIL*CSRTSS
Trigger: GCTCGACGTCCTGGAGCAGCAGAGAATCGGGCGGCT...TGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp AGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGGCCCACGTGTAGATaGGGCTGGTCTCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: REEPGRVWQESSTGKSVPGPTCR*GWSQSF
Trigger: GAAGCTCTGAGACCAGCCGCATCTACACGTGGGCCC...TGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp AGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGGGCAGCTGGAGGGGCCTaGTGGAGCTGCGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RQTAPNTGLLSHGQQGVWAAGGA*WSCVSS
Trigger: GCTGCTGACGCAGCTCCAGCAGGCCCCTCCAGCTGC...CCAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCCGGGAGGTGGAGGTTaGAGTGAGCCGCGATCGTGC +
Preference number: 4 (lower is better)
Translates to: GEADGSQHWFVESWPTGCPGGGG*SEPRSC
Trigger: GCACGATCGCGGCTCACTGCAACCTCCACCTCCCGG...ACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp AGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGGGCTGAGGGAGCCACGTaGCCTGGCTGGGGATGCACC +
Preference number: 4 (lower is better)
Translates to: RQTAPNTGLLSHGQQGVWAEGAT*PGWGCT
Trigger: GGTGCATCCCCAGCCAGGGCACGTGGCTCCCTCAGC...CCAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTAGATGGTGTCGGCCATaGCTCGGAGCACCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: GEADGSQHWFVESWPTGCRWCRP*LGAPGW
Trigger: CCAGCCGGGTGCTCCGAGCCATGGCCGACACCATCT...ACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACCTCCCGCTGCCGAAGATaGTGTCGGCCATGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: AGSGRNPPQGSLFQAPDTSRCRR*CRPWLG
Trigger: TCCGAGCCATGGCCGACACCATCTTCGGCAGCGGGA...GGTGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AAGGGGTGCAGAAAGGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTAGCCCGTCTGCAGCTTaGCTCGAAGGGCAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: KGCRKALSWGGRRLPTLVSPSAA*LEGQAA
Trigger: GGCAGCTTGCCCTTCGAGCCAAGCTGCAGACGGGCT...AACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCCTTTCTGCACCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGAGCCCGTCTGCAGCTTaGCTCGAAGGGCAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: AGEADGSQHWFVESWPTGSPSAA*LEGQAA
Trigger: GGCAGCTTGCCCTTCGAGCCAAGCTGCAGACGGGCT...CCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACAAGCCCGTCTGCAGCTTaGCTCGAAGGGCAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GQGLAGILHREVCSRHQTSPSAA*LEGQAA
Trigger: GGCAGCTTGCCCTTCGAGCCAAGCTGCAGACGGGCT...TGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTGGGGTCTGGAGGGCTCACATTCCGCCTCATaGTCTCCAGCCGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: EGKFPEGSAQELLWGLEGSHSAS*SPAAPP
Trigger: TGGTGGAGCGGCTGGAGACCATGAGGCGGAATGTGA...GCCCTCCAGACCCCAGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR CCA 90 bp GAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCTCACATTCCGCCTCATaGTCTCCAGCCGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: EEPGRVWQESSTGKSVPGSHSAS*SPAAPP
Trigger: TGGTGGAGCGGCTGGAGACCATGAGGCGGAATGTGA...GCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCCGCAGAGCAGACACTaGGACAGGCCGTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: GTELGRQTAPNTGLLSHGPQSRH*DRPFPI
Trigger: GATGGGGAACGGCCTGTCCCAGTGTCTGCTCTGCGG...GCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTGGCAAAGGTCGGAAGTaGGGGTCATCAGCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: VREEPGRVWQESSTGKSVGKGRK*GSSARP
Trigger: TGGCCGAGCTGATGACCCCCACTTCCGACCTTTGCC...AACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCAGGCAAAGGTCGGAAGTaGGGGTCATCAGCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: RSRAGSGRNPPQGSLFQAGKGRK*GSSARP
Trigger: TGGCCGAGCTGATGACCCCCACTTCCGACCTTTGCC...TGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGAGGCAAAGGTCGGAAGTaGGGGTCATCAGCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: PGRVWQESSTGKSVPGTRGKGRK*GSSARP
Trigger: TGGCCGAGCTGATGACCCCCACTTCCGACCTTTGCC...TCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCAAAGGTCGGAAGTaGGGGTCATCAGCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: REEPGRVWQESSTGKSVPGKGRK*GSSARP
Trigger: TGGCCGAGCTGATGACCCCCACTTCCGACCTTTGCC...TGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACAGCTCTGCCGGTTCCGTaGGCAAAGGTCGGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: GQGLAGILHREVCSRHQTALPVP*AKVGSG
Trigger: CCCACTTCCGACCTTTGCCCACGGAACCGGCAGAGC...TGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp ATAGCAACGGAGATAGCCCCACCGGGCGGCCCCTCTGACACTGCATGTGGGAAAGCTCTGCCGGTTCCGTaGGCAAAGGTCGGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: IATEIAPPGGPSDTACGKALPVP*AKVGSG
Trigger: CCCACTTCCGACCTTTGCCCACGGAACCGGCAGAGC...TTTCCCACATGCAGTGTCAGAGGGGCCGCCCGGTGGGGCTATCTCCGTTGCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCTGGTCTCAGAGCTTCTaGGCTCTCGCTCTGCCGGTT +
Preference number: 4 (lower is better)
Translates to: EEPGRVWQESSTGKSVPGWSQSF*ALALPV
Trigger: AACCGGCAGAGCGAGAGCCCAGAAGCTCTGAGACCA...GCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCTGGTCTCAGAGCTTCTaGGCTCTCGCTCTGCCGGTT +
Preference number: 4 (lower is better)
Translates to: EPGRVWQESSTGKSVPGTWSQSF*ALALPV
Trigger: AACCGGCAGAGCGAGAGCCCAGAAGCTCTGAGACCA...GGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTGGTCTCAGAGCTTCTaGGCTCTCGCTCTGCCGGTT +
Preference number: 4 (lower is better)
Translates to: GQGGAGQGLAGILHREVCWSQSF*ALALPV
Trigger: AACCGGCAGAGCGAGAGCCCAGAAGCTCTGAGACCA...ACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGACGTGTAGATGCGGCTaGTCTCAGAGCTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RSGRSRAGSGRNPPQGSLTCRCG*SQSFWA
Trigger: AGCCCAGAAGCTCTGAGACCAGCCGCATCTACACGT...CAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGAGGCACGTGTAGATGCGGCTaGTCTCAGAGCTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: AWREGPSRPRNPGFGAGGTCRCG*SQSFWA
Trigger: AGCCCAGAAGCTCTGAGACCAGCCGCATCTACACGT...GCCTCCTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTTCCCCGTCTCACCACTaGCCAGGCTGCTCTGGCACC +
Preference number: 4 (lower is better)
Translates to: GEADGSQHWFVESWPTGCSPSHH*PGCSGT
Trigger: GGTGCCAGAGCAGCCTGGCCAGTGGTGAGACGGGGA...ACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGAGTGGTTGGAGGGGGTaGCGGATGCAGACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: AGEADGSQHWFVESWPTGSGWRG*RMQTAP
Trigger: GGGAGCTGTCTGCATCCGCCACCCCCTCCAACCACT...CCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACCAGTGGTTGGAGGGGGTaGCGGATGCAGACAGCTCCC +
Preference number: 4 (lower is better)
Translates to: AGSGRNPPQGSLFQAPDTSGWRG*RMQTAP
Trigger: GGGAGCTGTCTGCATCCGCCACCCCCTCCAACCACT...GGTGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCCAGGAGCTCCCAGCTTaGAGAGAAGGCCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: QGGAGQGLAGILHREVCSQELPA*REGPSR
Trigger: TCTGGAAGGGCCTTCTCTCCAAGCTGGGAGCTCCTG...GGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTGCACCCGGCTGGGGGTaGGGAGTCACATCGGGAACA +
Preference number: 4 (lower is better)
Translates to: GEADGSQHWFVESWPTGCAPGWG*GVTSGT
Trigger: TGTTCCCGATGTGACTCCCCACCCCCAGCCGGGTGC...ACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000536489.6
ENST00000618002.4
CDS-3UTR TCA 90 bp CCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGATTGGGGCAAACCCACTaGTCATTCCCGCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: PGRVWQESSTGKSVPGTRLGQTH*SFPLPK
Trigger: CTTCGGCAGCGGGAATGATCAGTGGGTTTGCCCCAA...TCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp AGTCTTGCCATTAATATAGCAACGGAGATAGCCCCACCGGGCGGCCCCTCTGACCGCCTTTCCGGTCCCTaGCCCCAGTGGATGGGAGTC +
Preference number: 4 (lower is better)
Translates to: SLAINIATEIAPPGGPSDRLSGP*PQWMGV
Trigger: GACTCCCATCCACTGGGGTCAGGGACCGGAAAGGCG...GTCAGAGGGGCCGCCCGGTGGGGCTATCTCCGTTGCTATATTAATGGCAAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGCGCCTTTCCGGTCCCTaGCCCCAGTGGATGGGAGTC +
Preference number: 4 (lower is better)
Translates to: EADGSQHWFVESWPTGCLRLSGP*PQWMGV
Trigger: GACTCCCATCCACTGGGGTCAGGGACCGGAAAGGCG...CAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGCAACAGGGTGTCTGGTaGGGGCACAAGGACCGGTCA +
Preference number: 4 (lower is better)
Translates to: AGEADGSQHWFVESWPTGQQGVW*GHKDRS
Trigger: TGACCGGTCCTTGTGCCCTCACCAGACACCCTGTTG...CCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp ATAGCAACGGAGATAGCCCCACCGGGCGGCCCCTCTGACACTGCATGTGGGAAACAACAGGGTGTCTGGTaGGGGCACAAGGACCGGTCA +
Preference number: 4 (lower is better)
Translates to: IATEIAPPGGPSDTACGKQQGVW*GHKDRS
Trigger: TGACCGGTCCTTGTGCCCTCACCAGACACCCTGTTG...TTTCCCACATGCAGTGTCAGAGGGGCCGCCCGGTGGGGCTATCTCCGTTGCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCCCGAGGTGTTCCAGATaGGGAGCTGAATCACTGGGA +
Preference number: 4 (lower is better)
Translates to: EEPGRVWQESSTGKSVPGPRCSR*GAESLG
Trigger: TCCCAGTGATTCAGCTCCTCATCTGGAACACCTCGG...GCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
CDS-3UTR GCA 90 bp GGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACACTGATCATTCCCGCTaGCGAAGATGGTGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: GAGQGLAGILHREVCSRHTDHSR*RRWCRP
Trigger: TGGCCGACACCATCTTCGGCAGCGGGAATGATCAGT...GTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGACTGATCATTCCCGCTaGCGAAGATGGTGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: GRSRAGSGRNPPQGSLFQTDHSR*RRWCRP
Trigger: TGGCCGACACCATCTTCGGCAGCGGGAATGATCAGT...CTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGACTGATCATTCCCGCTaGCGAAGATGGTGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: GGAGQGLAGILHREVCSRTDHSR*RRWCRP
Trigger: TGGCCGACACCATCTTCGGCAGCGGGAATGATCAGT...CCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACAGCTCGAAGGGCAAGCTaGCGGTCATTGGGGCAAACC +
Preference number: 4 (lower is better)
Translates to: GQGLAGILHREVCSRHQTARRAS*RSLGQT
Trigger: GGTTTGCCCCAATGACCGGCAGCTTGCCCTTCGAGC...TGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp AAGGGGTGCAGAAAGGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTGCTCGAAGGGCAAGCTaGCGGTCATTGGGGCAAACC +
Preference number: 4 (lower is better)
Translates to: KGCRKALSWGGRRLPTLVARRAS*RSLGQT
Trigger: GGTTTGCCCCAATGACCGGCAGCTTGCCCTTCGAGC...AACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCCTTTCTGCACCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp AAAGGTGAGCTGAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTGGGTCCGCCGGGCTGAGGTaGTGCTTCCTCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: KGELRGSSRKAALRNYSGSAGLR*CFLLCF
Trigger: GAAGCAGAGGAGGAAGCAGCACCTCAGCCCGGCGGA...CCCAGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTCAGCTCACCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR GCA 90 bp AAAGGTGAGCTGAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTGGGGCCCTCTGGATGACCTaGAGGATGGCCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: KGELRGSSRKAALRNYSGALWMT*RMASTS
Trigger: GGAGGTGGAGGCCATCCTGCAGGTCATCCAGAGGGC...CCCAGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTCAGCTCACCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR GCA 90 bp GCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGGGGCCCACGTGTAGATaGGGCTGGTCTCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: AGEADGSQHWFVESWPTGGPTCR*GWSQSF
Trigger: GAAGCTCTGAGACCAGCCGCATCTACACGTGGGCCC...CCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCGGGCCCACGTGTAGATaGGGCTGGTCTCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: GTELGRQTAPNTGLLSHGGPTCR*GWSQSF
Trigger: GAAGCTCTGAGACCAGCCGCATCTACACGTGGGCCC...GCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp ATAGCAACGGAGATAGCCCCACCGGGCGGCCCCTCTGACACTGCATGTGGGAAAGGGCCCACGTGTAGATaGGGCTGGTCTCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: IATEIAPPGGPSDTACGKGPTCR*GWSQSF
Trigger: GAAGCTCTGAGACCAGCCGCATCTACACGTGGGCCC...TTTCCCACATGCAGTGTCAGAGGGGCCGCCCGGTGGGGCTATCTCCGTTGCTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGTGGGGGCCTCCACGCTaGCACCTGACTCCTTCCAGG +
Preference number: 4 (lower is better)
Translates to: EADGSQHWFVESWPTGCLWGPPR*HLTPSR
Trigger: CCTGGAAGGAGTCAGGTGGCAGCGTGGAGGCCCCCA...CAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp AGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGGCCGGGAGGTGGAGGTTaGAGTGAGCCGCGATCGTGC +
Preference number: 4 (lower is better)
Translates to: RQTAPNTGLLSHGQQGVWPGGGG*SEPRSC
Trigger: GCACGATCGCGGCTCACTGCAACCTCCACCTCCCGG...CCAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGCCGGGAGGTGGAGGTTaGAGTGAGCCGCGATCGTGC +
Preference number: 4 (lower is better)
Translates to: EADGSQHWFVESWPTGCLPGGGG*SEPRSC
Trigger: GCACGATCGCGGCTCACTGCAACCTCCACCTCCCGG...CAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCCCTTCCTGCAGTCTTTaGAGAACACCGACGAGCTGC +
Preference number: 4 (lower is better)
Translates to: EPGRVWQESSTGKSVPGTPSCSL*RTPTSC
Trigger: GCAGCTCGTCGGTGTTCTGCAAAGACTGCAGGAAGG...GGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000536489.6
ENST00000608519.5
ENST00000632000.1
ENST00000632545.1
CDS-3UTR GCA 90 bp GGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCCTTCCTGCAGTCTTTaGAGAACACCGACGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GGAGQGLAGILHREVCSRPSCSL*RTPTSC
Trigger: GCAGCTCGTCGGTGTTCTGCAAAGACTGCAGGAAGG...CCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000536489.6
ENST00000608519.5
ENST00000632000.1
ENST00000632545.1
CDS-3UTR CCA 90 bp AGTCTTGCCATTAATATAGCAACGGAGATAGCCCCACCGGGCGGCCCCTCTGACAGATGGTGTCGGCCATaGCTCGGAGCACCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: SLAINIATEIAPPGGPSDRWCRP*LGAPGW
Trigger: CCAGCCGGGTGCTCCGAGCCATGGCCGACACCATCT...GTCAGAGGGGCCGCCCGGTGGGGCTATCTCCGTTGCTATATTAATGGCAAGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCAAGCTGCCGGTCATTaGGGCAAACCCACTGATCAT +
Preference number: 4 (lower is better)
Translates to: DRSGRSRAGSGRNPPQGSQAAGH*GKPTDH
Trigger: ATGATCAGTGGGTTTGCCCCAATGACCGGCAGCTTG...ACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCATCACATTCCGCCTCATaGTCTCCAGCCGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: REEPGRVWQESSTGKSVPSHSAS*SPAAPP
Trigger: TGGTGGAGCGGCTGGAGACCATGAGGCGGAATGTGA...TGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AAAGGTGAGCTGAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTGGGCCGCAGAGCAGACACTaGGACAGGCCGTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: KGELRGSSRKAALRNYSGPQSRH*DRPFPI
Trigger: GATGGGGAACGGCCTGTCCCAGTGTCTGCTCTGCGG...CCCAGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTCAGCTCACCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR CCA 90 bp GGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACGGCAAAGGTCGGAAGTaGGGGTCATCAGCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: GRVWQESSTGKSVPGTRHGKGRK*GSSARP
Trigger: TGGCCGAGCTGATGACCCCCACTTCCGACCTTTGCC...GTGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACTGGTCTCAGAGCTTCTaGGCTCTCGCTCTGCCGGTT +
Preference number: 4 (lower is better)
Translates to: RAGSGRNPPQGSLFQAPDWSQSF*ALALPV
Trigger: AACCGGCAGAGCGAGAGCCCAGAAGCTCTGAGACCA...GTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGACGTGTAGATGCGGCTaGTCTCAGAGCTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GGAGQGLAGILHREVCSRTCRCG*SQSFWA
Trigger: AGCCCAGAAGCTCTGAGACCAGCCGCATCTACACGT...CCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACACGTGTAGATGCGGCTaGTCTCAGAGCTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GAGQGLAGILHREVCSRHTCRCG*SQSFWA
Trigger: AGCCCAGAAGCTCTGAGACCAGCCGCATCTACACGT...GTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCACTGTCACTGTCACTaGAAACCACTCTTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: DRSGRSRAGSGRNPPQGSHCHCH*KPLFLG
Trigger: CCCGAGGAAGAGTGGTTTCCAGTGACAGTGACAGTG...ACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGGGATGCACCTGAACGCTGCTCTTCAGCAAGTGAGTTCATAGCATCCACCAGAAGGTGGCCCGGCGGGTaGGTGAACCCCATCCTGGGG +
Preference number: 4 (lower is better)
Translates to: GDAPERCSSASEFIASTRRWPGG*VNPILG
Trigger: CCCCAGGATGGGGTTCACCCACCCGCCGGGCCACCT...TCTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp ACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAAGAGCCGGGCAGGGTCTaGCAGGAATCCTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: TELGRQTAPNTGLLSHGQEPGRV*QESSTG
Trigger: CCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTC...TTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGAGAGAAGTGAATTCATaGCTGAGGGAGCCACGTGCC +
Preference number: 4 (lower is better)
Translates to: RSGRSRAGSGRNPPQGSLREVNS*LREPRA
Trigger: GGCACGTGGCTCCCTCAGCCATGAATTCACTTCTCT...CAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGAGGACAAAAAGTGAATaGTGGGGGCCCAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: GRSRAGSGRNPPQGSLFQRTKSE*WGPRSS
Trigger: GGAGCTCCTGGGCCCCCACCATTCACTTTTTGTCCT...CTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCCCTGGATTCTCCTCGTaGATGTCTGGTAAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: EEPGRVWQESSTGKSVPGPGFSS*MSGKAP
Trigger: TGGGGCCTTACCAGACATCCACGAGGAGAATCCAGG...GCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323434.12
ENST00000632000.1
CDS-3UTR CCA 90 bp GAGCTGAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTGGGGTCTGGGCTCAGGAACTACTCTaGGGTCTGGAGGGCGTCTCA +
Preference number: 4 (lower is better)
Translates to: ELRGSSRKAALRNYSGVWAQELL*GLEGVS
Trigger: TGAGACGCCCTCCAGACCCCAGAGTAGTTCCTGAGC...CCAGACCCCAGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR TCA 90 bp GGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCTCACTGCTCTGGCTCTaGTGCTCACCTCTAAGGGGC +
Preference number: 4 (lower is better)
Translates to: GTELGRQTAPNTGLLSHGSLLWL*CSPLRG
Trigger: GCCCCTTAGAGGTGAGCATCAGAGCCAGAGCAGTGA...GCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp CGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACCCGAGGTGTTCCAGATaGGGAGCTGAATCACTGGGA +
Preference number: 4 (lower is better)
Translates to: RAGSGRNPPQGSLFQAPDPRCSR*GAESLG
Trigger: TCCCAGTGATTCAGCTCCTCATCTGGAACACCTCGG...GTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
CDS-3UTR TCA 90 bp GAGCTGAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTGGGGTCTGGCTCCAACTCAAAAGGTaGGCTGAGGGGAAGTTCCCG +
Preference number: 4 (lower is better)
Translates to: ELRGSSRKAALRNYSGVWLQLKR*AEGKFP
Trigger: CGGGAACTTCCCCTCAGCTCACCTTTTGAGTTGGAG...CCAGACCCCAGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR GCA 90 bp AGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACAGCTGCAGGCCTCATaGTTGCTGTCTCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: RSRAGSGRNPPQGSLFQAQLQAS*LLSPKC
Trigger: GCACTTTGGAGACAGCAAGCATGAGGCCTGCAGCTG...TGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCTCAAAGCTGTCAGCTaGAGGCCTCATGCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: GGAGQGLAGILHREVCSRLKAVS*RPHACC
Trigger: ACAGCAAGCATGAGGCCTGCAGCTGACAGCTTTGAG...CCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp TCCCAGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGCTCAAAGCTGTCAGCTaGAGGCCTCATGCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SQLGEKALPDPGTRGLGQLKAVS*RPHACC
Trigger: ACAGCAAGCATGAGGCCTGCAGCTGACAGCTTTGAG...CTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp AGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAACTGATCATTCCCGCTaGCGAAGATGGTGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: REEPGRVWQESSTGKSVPTDHSR*RRWCRP
Trigger: TGGCCGACACCATCTTCGGCAGCGGGAATGATCAGT...TGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp AGTCTTGCCATTAATATAGCAACGGAGATAGCCCCACCGGGCGGCCCCTCTGACTCCGCCGGGCTGAGGTaGTGCTTCCTCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SLAINIATEIAPPGGPSDSAGLR*CFLLCF
Trigger: GAAGCAGAGGAGGAAGCAGCACCTCAGCCCGGCGGA...GTCAGAGGGGCCGCCCGGTGGGGCTATCTCCGTTGCTATATTAATGGCAAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp ACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAAGCCCTCTGGATGACCTaGAGGATGGCCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: TELGRQTAPNTGLLSHGQALWMT*RMASTS
Trigger: GGAGGTGGAGGCCATCCTGCAGGTCATCCAGAGGGC...TTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp TCAAAAGGTGAGCTGAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTCGCCCGATTCTCTGCTaGTCCAGGACGTCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: SKGELRGSSRKAALRNYSRPILC*SRTSSR
Trigger: GCGGCTCGACGTCCTGGAGCAGCAGAGAATCGGGCG...AGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTCAGCTCACCTTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR GCA 90 bp GAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTGGGGTCTGGAGGGCTCTTCCTGCAGTCTTTaGAGAACACCGACGAGCTGC +
Preference number: 4 (lower is better)
Translates to: EGKFPEGSAQELLWGLEGSSCSL*RTPTSC
Trigger: GCAGCTCGTCGGTGTTCTGCAAAGACTGCAGGAAGA...GCCCTCCAGACCCCAGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR GCA 90 bp AAAGGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGAGGGGGTGGCGGATaGAGACAGCTCCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: KGTELGRQTAPNTGLLSHGGGGG*RQLPRR
Trigger: TCTCCTGGGGAGCTGTCTGCATCCGCCACCCCCTCC...ATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCCTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp CGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGGATGCACCTGAACGCTaGTCTTCAGCAAGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: RSGRSRAGSGRNPPQGSLDAPER*SSASEF
Trigger: GAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATC...CAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AGTCTTGCCATTAATATAGCAACGGAGATAGCCCCACCGGGCGGCCCCTCTGACTCCCGCTGCCGAAGATaGTGTCGGCCATGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: SLAINIATEIAPPGGPSDSRCRR*CRPWLG
Trigger: TCCGAGCCATGGCCGACACCATCTTCGGCAGCGGGA...GTCAGAGGGGCCGCCCGGTGGGGCTATCTCCGTTGCTATATTAATGGCAAGACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTGGGGTCTGGAGGGCGTCAAGCTGCCGGTCATTaGGGCAAACCCACTGATCAT +
Preference number: 4 (lower is better)
Translates to: GEVPGRQRSGTTLGSGGRQAAGH*GKPTDH
Trigger: ATGATCAGTGGGTTTGCCCCAATGACCGGCAGCTTG...ACGCCCTCCAGACCCCAGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR CCA 90 bp AAGGGGTGCAGAAAGGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTCACATTCCGCCTCATaGTCTCCAGCCGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: KGCRKALSWGGRRLPTLVSHSAS*SPAAPP
Trigger: TGGTGGAGCGGCTGGAGACCATGAGGCGGAATGTGA...AACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCCTTTCTGCACCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACATCACATTCCGCCTCATaGTCTCCAGCCGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: GQGLAGILHREVCSRHQTSHSAS*SPAAPP
Trigger: TGGTGGAGCGGCTGGAGACCATGAGGCGGAATGTGA...TGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGAGGCGGGGCAAGATATACTTaGGGAGCCCTTTGTAGAACC +
Preference number: 4 (lower is better)
Translates to: AWREGPSRPRNPGFGAGGGARYT*GALCRT
Trigger: GGTTCTACAAAGGGCTCCCCAAGTATATCTTGCCCC...GCCTCCTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTGGGGCAAGATATACTTaGGGAGCCCTTTGTAGAACC +
Preference number: 4 (lower is better)
Translates to: DRSGRSRAGSGRNPPQGSGARYT*GALCRT
Trigger: GGTTCTACAAAGGGCTCCCCAAGTATATCTTGCCCC...ACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGGGCTCTGCCGGTTCCGTaGGCAAAGGTCGGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: RQTAPNTGLLSHGQQGVWALPVP*AKVGSG
Trigger: CCCACTTCCGACCTTTGCCCACGGAACCGGCAGAGC...CCAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACATGGTCTCAGAGCTTCTaGGCTCTCGCTCTGCCGGTT +
Preference number: 4 (lower is better)
Translates to: GQGLAGILHREVCSRHQTWSQSF*ALALPV
Trigger: AACCGGCAGAGCGAGAGCCCAGAAGCTCTGAGACCA...TGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp TCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCACGTGTAGATGCGGCTaGTCTCAGAGCTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: SGRSRAGSGRNPPQGSLFTCRCG*SQSFWA
Trigger: AGCCCAGAAGCTCTGAGACCAGCCGCATCTACACGT...GAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCAACGTGTAGATGCGGCTaGTCTCAGAGCTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RSRAGSGRNPPQGSLFQATCRCG*SQSFWA
Trigger: AGCCCAGAAGCTCTGAGACCAGCCGCATCTACACGT...TGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGCACTGTCACTGTCACTaGAAACCACTCTTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: AGQGLAGILHREVCSRHQHCHCH*KPLFLG
Trigger: CCCGAGGAAGAGTGGTTTCCAGTGACAGTGACAGTG...CTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCACTGTCACTGTCACTaGAAACCACTCTTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: GAGQGLAGILHREVCSRHHCHCH*KPLFLG
Trigger: CCCGAGGAAGAGTGGTTTCCAGTGACAGTGACAGTG...GTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp TCCCAGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGCACTGTCACTGTCACTaGAAACCACTCTTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: SQLGEKALPDPGTRGLGQHCHCH*KPLFLG
Trigger: CCCGAGGAAGAGTGGTTTCCAGTGACAGTGACAGTG...CTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp ACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGGTTTGTTGAGTCATaGCCAACAGGGTGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: TGQGGAGQGLAGILHREVWFVES*PTGCLV
Trigger: CACCAGACACCCTGTTGGCCATGACTCAACAAACCA...GACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTGGTTTGTTGAGTCATaGCCAACAGGGTGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: RSGRSRAGSGRNPPQGSLWFVES*PTGCLV
Trigger: CACCAGACACCCTGTTGGCCATGACTCAACAAACCA...CAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CCCAGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGTGGTTTGTTGAGTCATaGCCAACAGGGTGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: PSLERRPFQTQEPGVWGRWFVES*PTGCLV
Trigger: CACCAGACACCCTGTTGGCCATGACTCAACAAACCA...CCTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGGACGGCTCCCAACACTaGTTTGTTGAGTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: AGQGLAGILHREVCSRHQDGSQH*FVESWP
Trigger: TGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTC...CTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGGTAGATTGGGGGTGTaGGAGGGGAGGGTAATAAAT +
Preference number: 4 (lower is better)
Translates to: PVREEPGRVWQESSTGKSGRLGV*EGRVIN
Trigger: ATTTATTACCCTCCCCTCCCACACCCCCAATCTACC...AGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp ATAGCAACGGAGATAGCCCCACCGGGCGGCCCCTCTGACACTGCATGTGGGAAACAGGAGCTCCCAGCTTaGAGAGAAGGCCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: IATEIAPPGGPSDTACGKQELPA*REGPSR
Trigger: TCTGGAAGGGCCTTCTCTCCAAGCTGGGAGCTCCTG...TTTCCCACATGCAGTGTCAGAGGGGCCGCCCGGTGGGGCTATCTCCGTTGCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTGGGGTCTGGAGGGCAACTACTCTGGGGTCTaGAGGGCGTCTCACAGGAAA +
Preference number: 4 (lower is better)
Translates to: EGKFPEGSAQELLWGLEGNYSGV*RASHRK
Trigger: TTTCCTGTGAGACGCCCTCCAGACCCCAGAGTAGTT...GCCCTCCAGACCCCAGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR CCA 90 bp GGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTGGGGTCTGGAGGGCGTAACTACTCTGGGGTCTaGAGGGCGTCTCACAGGAAA +
Preference number: 4 (lower is better)
Translates to: GEVPGRQRSGTTLGSGGRNYSGV*RASHRK
Trigger: TTTCCTGTGAGACGCCCTCCAGACCCCAGAGTAGTT...ACGCCCTCCAGACCCCAGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR CCA 90 bp GCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTGCGGTGGCTCACGTTTCACTGCGGTCCTaGGCCAGCCCACGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: AGHEGIQRNLIGLGAVAHVSLRS*ASPREG
Trigger: CCCCTCCCGTGGGCTGGCCCAGGACCGCAGTGAAAC...GTGAGCCACCGCACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp AAAGGTGAGCTGAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTGGGTTGGGGCAAACCCACTaGTCATTCCCGCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: KGELRGSSRKAALRNYSGLGQTH*SFPLPK
Trigger: CTTCGGCAGCGGGAATGATCAGTGGGTTTGCCCCAA...CCCAGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTCAGCTCACCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR TCA 90 bp GAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGCAACAGGGTGTCTGGTaGGGGCACAAGGACCGGTCA +
Preference number: 4 (lower is better)
Translates to: EADGSQHWFVESWPTGCLQQGVW*GHKDRS
Trigger: TGACCGGTCCTTGTGCCCTCACCAGACACCCTGTTG...CAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp CCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACCAACACTGGTTTGTTaGGTCATGGCCAACAGGGTG +
Preference number: 4 (lower is better)
Translates to: PGRVWQESSTGKSVPGTRPTLVC*VMANRV
Trigger: CACCCTGTTGGCCATGACTCAACAAACCAGTGTTGG...TCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp AGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCACCAACACTGGTTTGTTaGGTCATGGCCAACAGGGTG +
Preference number: 4 (lower is better)
Translates to: SRAGSGRNPPQGSLFQAPPTLVC*VMANRV
Trigger: CACCCTGTTGGCCATGACTCAACAAACCAGTGTTGG...TGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GGGGATGCACCTGAACGCTGCTCTTCAGCAAGTGAGTTCATAGCATCCACCAGAACCGGGCGGCCCCTCTaGCACTGCATGTGGGAAACC +
Preference number: 4 (lower is better)
Translates to: GDAPERCSSASEFIASTRTGRPL*HCMWET
Trigger: GGTTTCCCACATGCAGTGTCAGAGGGGCCGCCCGGT...TCTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACAAACCAGGCAGGCCATaGGGGGATTCAAAGAAACCT +
Preference number: 4 (lower is better)
Translates to: GAGQGLAGILHREVCSRHKPGRP*GDSKKP
Trigger: AGGTTTCTTTGAATCCCCTCATGGCCTGCCTGGTTT...GTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp AGTCTTGCCATTAATATAGCAACGGAGATAGCCCCACCGGGCGGCCCCTCTGACGGCTGGGGATGCACCTaGACGCTGCTCTTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: SLAINIATEIAPPGGPSDGWGCT*TLLFSK
Trigger: CTTGCTGAAGAGCAGCGTTCAGGTGCATCCCCAGCC...GTCAGAGGGGCCGCCCGGTGGGGCTATCTCCGTTGCTATATTAATGGCAAGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp ACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAAGGCTGGGGATGCACCTaGACGCTGCTCTTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: TELGRQTAPNTGLLSHGQGWGCT*TLLFSK
Trigger: CTTGCTGAAGAGCAGCGTTCAGGTGCATCCCCAGCC...TTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGGGCGGGCGGATCACTTaGGACCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: EADGSQHWFVESWPTGCLGGRIT*DQEFKT
Trigger: GGTCTTGAACTCCTGGTCTCAAGTGATCCGCCCGCC...CAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp ACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAAGCTCGAAGGGCAAGCTaGCGGTCATTGGGGCAAACC +
Preference number: 4 (lower is better)
Translates to: TELGRQTAPNTGLLSHGQARRAS*RSLGQT
Trigger: GGTTTGCCCCAATGACCGGCAGCTTGCCCTTCGAGC...TTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp TCAAAAGGTGAGCTGAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTGCCCTCTGGATGACCTaGAGGATGGCCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: SKGELRGSSRKAALRNYSALWMT*RMASTS
Trigger: GGAGGTGGAGGCCATCCTGCAGGTCATCCAGAGGGC...AGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTCAGCTCACCTTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR GCA 90 bp TCAAAAGGTGAGCTGAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTAGCCGCCCGATTCTCTaGTGCTCCAGGACGTCGAGC +
Preference number: 4 (lower is better)
Translates to: SKGELRGSSRKAALRNYSSRPIL*CSRTSS
Trigger: GCTCGACGTCCTGGAGCAGCAGAGAATCGGGCGGCT...AGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTCAGCTCACCTTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR GCA 90 bp AGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCATCTTCCTGCAGTCTTTaGAGAACACCGACGAGCTGC +
Preference number: 4 (lower is better)
Translates to: REEPGRVWQESSTGKSVPSSCSL*RTPTSC
Trigger: GCAGCTCGTCGGTGTTCTGCAAAGACTGCAGGAAGA...TGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331302.12
ENST00000608278.2
ENST00000618002.4
ENST00000632616.1
CDS-3UTR GCA 90 bp CGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTGCAGACTTTCTTCCTaGAGTCTTTGCAGAACACCG +
Preference number: 4 (lower is better)
Translates to: RSGRSRAGSGRNPPQGSLCRLSS*SLCRTP
Trigger: CGGTGTTCTGCAAAGACTGCAGGAAGAAAGTCTGCA...CAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331302.12
ENST00000608278.2
ENST00000618002.4
ENST00000632616.1
CDS-3UTR GCA 90 bp GCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACCCCTTCCTGCAGTCTTTaGAGAACACCGACGAGCTGC +
Preference number: 4 (lower is better)
Translates to: AGSGRNPPQGSLFQAPDTPSCSL*RTPTSC
Trigger: GCAGCTCGTCGGTGTTCTGCAAAGACTGCAGGAAGG...GGTGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000536489.6
ENST00000608519.5
ENST00000632000.1
ENST00000632545.1
CDS-3UTR GCA 90 bp GGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGTCTTCCAGACCTTCCTaGAGTCTTTGCAGAACACCG +
Preference number: 4 (lower is better)
Translates to: GRSRAGSGRNPPQGSLFQSSRPS*SLCRTP
Trigger: CGGTGTTCTGCAAAGACTGCAGGAAGGTCTGGAAGA...CTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000536489.6
ENST00000608519.5
ENST00000632000.1
ENST00000632545.1
CDS-3UTR CCA 90 bp CGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACCAAGCTGCCGGTCATTaGGGCAAACCCACTGATCAT +
Preference number: 4 (lower is better)
Translates to: RAGSGRNPPQGSLFQAPDQAAGH*GKPTDH
Trigger: ATGATCAGTGGGTTTGCCCCAATGACCGGCAGCTTG...GTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp TCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAAGCTGCCGGTCATTaGGGCAAACCCACTGATCAT +
Preference number: 4 (lower is better)
Translates to: SGRSRAGSGRNPPQGSLFQAAGH*GKPTDH
Trigger: ATGATCAGTGGGTTTGCCCCAATGACCGGCAGCTTG...GAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCACAAGCTGCCGGTCATTaGGGCAAACCCACTGATCAT +
Preference number: 4 (lower is better)
Translates to: REEPGRVWQESSTGKSVPQAAGH*GKPTDH
Trigger: ATGATCAGTGGGTTTGCCCCAATGACCGGCAGCTTG...TGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCACAAGCTGCCGGTCATTaGGGCAAACCCACTGATCAT +
Preference number: 4 (lower is better)
Translates to: SRAGSGRNPPQGSLFQAPQAAGH*GKPTDH
Trigger: ATGATCAGTGGGTTTGCCCCAATGACCGGCAGCTTG...TGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp TCAAAAGGTGAGCTGAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTAGCCCGTCTGCAGCTTaGCTCGAAGGGCAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: SKGELRGSSRKAALRNYSSPSAA*LEGQAA
Trigger: GGCAGCTTGCCCTTCGAGCCAAGCTGCAGACGGGCT...AGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTCAGCTCACCTTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR CCA 90 bp TCAAAAGGTGAGCTGAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTAGCCGCTCTGCCCTCTaGATGACCTGCAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: SKGELRGSSRKAALRNYSSRSAL*MTCRMA
Trigger: GGCCATCCTGCAGGTCATCCAGAGGGCAGAGCGGCT...AGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTCAGCTCACCTTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR CCA 90 bp GGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTTCACATTCCGCCTCATaGTCTCCAGCCGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: GEADGSQHWFVESWPTGCSHSAS*SPAAPP
Trigger: TGGTGGAGCGGCTGGAGACCATGAGGCGGAATGTGA...ACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp TCAAAAGGTGAGCTGAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTCCGCAGAGCAGACACTaGGACAGGCCGTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: SKGELRGSSRKAALRNYSPQSRH*DRPFPI
Trigger: GATGGGGAACGGCCTGTCCCAGTGTCTGCTCTGCGG...AGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTCAGCTCACCTTTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR CCA 90 bp GAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTGGGGTCTGGAGGGCCCTCGATCCCACATTTaGTGCAGACTTTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: EGKFPEGSAQELLWGLEGPRSHI*CRLSSC
Trigger: GCAGGAAGAAAGTCTGCACCAAATGTGGGATCGAGG...GCCCTCCAGACCCCAGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR CCA 90 bp GGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTGGGGCAAGATATACTTaGGGAGCCCTTTGTAGAACC +
Preference number: 4 (lower is better)
Translates to: GQGGAGQGLAGILHREVCGARYT*GALCRT
Trigger: GGTTCTACAAAGGGCTCCCCAAGTATATCTTGCCCC...ACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGGGGGCAAGATATACTTaGGGAGCCCTTTGTAGAACC +
Preference number: 4 (lower is better)
Translates to: GGAGQGLAGILHREVCSRGARYT*GALCRT
Trigger: GGTTCTACAAAGGGCTCCCCAAGTATATCTTGCCCC...CCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACGGGGCAAGATATACTTaGGGAGCCCTTTGTAGAACC +
Preference number: 4 (lower is better)
Translates to: GAGQGLAGILHREVCSRHGARYT*GALCRT
Trigger: GGTTCTACAAAGGGCTCCCCAAGTATATCTTGCCCC...GTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AAAGGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGCTCTGCCGGTTCCGTaGGCAAAGGTCGGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: KGTELGRQTAPNTGLLSHALPVP*AKVGSG
Trigger: CCCACTTCCGACCTTTGCCCACGGAACCGGCAGAGC...ATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACAACGTGTAGATGCGGCTaGTCTCAGAGCTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GQGLAGILHREVCSRHQTTCRCG*SQSFWA
Trigger: AGCCCAGAAGCTCTGAGACCAGCCGCATCTACACGT...TGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCACTGTCACTGTCACTaGAAACCACTCTTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: VREEPGRVWQESSTGKSVHCHCH*KPLFLG
Trigger: CCCGAGGAAGAGTGGTTTCCAGTGACAGTGACAGTG...AACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTGCGGTGGCTCACTCCCCGTCTCACCACTaGCCAGGCTGCTCTGGCACC +
Preference number: 4 (lower is better)
Translates to: AGHEGIQRNLIGLGAVAHSPSHH*PGCSGT
Trigger: GGTGCCAGAGCAGCCTGGCCAGTGGTGAGACGGGGA...GTGAGCCACCGCACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTGCGGTGGCTCACACCTCCCCGTCTCACCACTaGCCAGGCTGCTCTGGCACC +
Preference number: 4 (lower is better)
Translates to: GHEGIQRNLIGLGAVAHTSPSHH*PGCSGT
Trigger: GGTGCCAGAGCAGCCTGGCCAGTGGTGAGACGGGGA...GGTGTGAGCCACCGCACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCTGGTTTGTTGAGTCATaGCCAACAGGGTGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: QGGAGQGLAGILHREVCSWFVES*PTGCLV
Trigger: CACCAGACACCCTGTTGGCCATGACTCAACAAACCA...GGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGTGGTTTGTTGAGTCATaGCCAACAGGGTGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: GRSRAGSGRNPPQGSLFQWFVES*PTGCLV
Trigger: CACCAGACACCCTGTTGGCCATGACTCAACAAACCA...CTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCAGACGGCTCCCAACACTaGTTTGTTGAGTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: RSRAGSGRNPPQGSLFQADGSQH*FVESWP
Trigger: TGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTC...TGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACGGCTCCCAACACTaGTTTGTTGAGTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: SRAGSGRNPPQGSLFQAPDGSQH*FVESWP
Trigger: TGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTC...TGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCGGTAGATTGGGGGTGTaGGAGGGGAGGGTAATAAAT +
Preference number: 4 (lower is better)
Translates to: QGGAGQGLAGILHREVCSGRLGV*EGRVIN
Trigger: ATTTATTACCCTCCCCTCCCACACCCCCAATCTACC...GGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGAGGGGTAGATTGGGGGTGTaGGAGGGGAGGGTAATAAAT +
Preference number: 4 (lower is better)
Translates to: SLERRPFQTQEPGVWGRRGRLGV*EGRVIN
Trigger: ATTTATTACCCTCCCCTCCCACACCCCCAATCTACC...CCTCCTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGATTAACTGGGTGTGGTaGCGGGCATCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: GGAGQGLAGILHREVCSRINWVW*RASVIP
Trigger: TGGGATTACAGATGCCCGCCACCACACCCAGTTAAT...CCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACATTAACTGGGTGTGGTaGCGGGCATCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: GAGQGLAGILHREVCSRHINWVW*RASVIP
Trigger: TGGGATTACAGATGCCCGCCACCACACCCAGTTAAT...GTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AAGGGGTGCAGAAAGGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTAGGACAAAAAGTGAATaGTGGGGGCCCAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: KGCRKALSWGGRRLPTLVRTKSE*WGPRSS
Trigger: GGAGCTCCTGGGCCCCCACCATTCACTTTTTGTCCT...AACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCCTTTCTGCACCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACCAGGACAAAAAGTGAATaGTGGGGGCCCAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: AGSGRNPPQGSLFQAPDTRTKSE*WGPRSS
Trigger: GGAGCTCCTGGGCCCCCACCATTCACTTTTTGTCCT...GGTGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AAAGGTGAGCTGAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTGGGGCTCAGGAACTACTCTaGGGTCTGGAGGGCGTCTCA +
Preference number: 4 (lower is better)
Translates to: KGELRGSSRKAALRNYSGAQELL*GLEGVS
Trigger: TGAGACGCCCTCCAGACCCCAGAGTAGTTCCTGAGC...CCCAGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTCAGCTCACCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR TCA 90 bp AAAGGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATCAACAGGGTGTCTGGTaGGGGCACAAGGACCGGTCA +
Preference number: 4 (lower is better)
Translates to: KGTELGRQTAPNTGLLSHQQGVW*GHKDRS
Trigger: TGACCGGTCCTTGTGCCCTCACCAGACACCCTGTTG...ATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACCCAACACTGGTTTGTTaGGTCATGGCCAACAGGGTG +
Preference number: 4 (lower is better)
Translates to: GRVWQESSTGKSVPGTRHPTLVC*VMANRV
Trigger: CACCCTGTTGGCCATGACTCAACAAACCAGTGTTGG...GTGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp AAGGGGTGCAGAAAGGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTCCAACACTGGTTTGTTaGGTCATGGCCAACAGGGTG +
Preference number: 4 (lower is better)
Translates to: KGCRKALSWGGRRLPTLVPTLVC*VMANRV
Trigger: CACCCTGTTGGCCATGACTCAACAAACCAGTGTTGG...AACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCCTTTCTGCACCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCCAACACTGGTTTGTTaGGTCATGGCCAACAGGGTG +
Preference number: 4 (lower is better)
Translates to: GTELGRQTAPNTGLLSHGPTLVC*VMANRV
Trigger: CACCCTGTTGGCCATGACTCAACAAACCAGTGTTGG...GCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR TCA 90 bp AGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGGTCACTGCTCTGGCTCTaGTGCTCACCTCTAAGGGGC +
Preference number: 4 (lower is better)
Translates to: RQTAPNTGLLSHGQQGVWSLLWL*CSPLRG
Trigger: GCCCCTTAGAGGTGAGCATCAGAGCCAGAGCAGTGA...CCAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp CCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACTGCTCTTCAGCAAGTaGGTTCATAGCATCCACCAG +
Preference number: 4 (lower is better)
Translates to: PGRVWQESSTGKSVPGTRLLFSK*VHSIHQ
Trigger: CTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAG...TCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp AGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACTGCTCTTCAGCAAGTaGGTTCATAGCATCCACCAG +
Preference number: 4 (lower is better)
Translates to: RSRAGSGRNPPQGSLFQALLFSK*VHSIHQ
Trigger: CTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAG...TGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp CGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACCTGCTCTTCAGCAAGTaGGTTCATAGCATCCACCAG +
Preference number: 4 (lower is better)
Translates to: RAGSGRNPPQGSLFQAPDLLFSK*VHSIHQ
Trigger: CTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAG...GTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGGTGCCACAGGGAAAGTaGGTTTCTTTACTGTTTGCC +
Preference number: 4 (lower is better)
Translates to: AGQGLAGILHREVCSRHQVPQGK*VSLLFA
Trigger: GGCAAACAGTAAAGAAACTCACTTTCCCTGTGGCAC...CTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp CTTTACTGTTTGCCAGCAGCAAGGACAAAAAGTGAATGGTGGGGGCCCAGGAGCCACCGTTGTCGGGGGTaGCCCGAGGTGTTCCAGATG +
Preference number: 4 (lower is better)
Translates to: LYCLPAARTKSEWWGPRSHRCRG*PEVFQM
Trigger: CATCTGGAACACCTCGGGTCACCCCCGACAACGGTG...GCTCCTGGGCCCCCACCATTCACTTTTTGTCCTTGCTGCTGGCAAACAGTAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000323434.12
ENST00000618002.4
ENST00000632000.1
CDS-3UTR GCA 90 bp GGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCTCAAAGCTGTCAGCTaGAGGCCTCATGCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: GTELGRQTAPNTGLLSHGLKAVS*RPHACC
Trigger: ACAGCAAGCATGAGGCCTGCAGCTGACAGCTTTGAG...GCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGGGATGCACCTGAACGCTGCTCTTCAGCAAGTGAGTTCATAGCATCCACCAGAGACGTCGAGCCGCTCTaGCCTCTGGATGACCTGCAG +
Preference number: 4 (lower is better)
Translates to: GDAPERCSSASEFIASTRDVEPL*PLDDLQ
Trigger: CTGCAGGTCATCCAGAGGGCAGAGCGGCTCGACGTC...TCTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGGGATGCACCTGAACGCTGCTCTTCAGCAAGTGAGTTCATAGCATCCACCAGAAGCCGCCCGATTCTCTaGTGCTCCAGGACGTCGAGC +
Preference number: 4 (lower is better)
Translates to: GDAPERCSSASEFIASTRSRPIL*CSRTSS
Trigger: GCTCGACGTCCTGGAGCAGCAGAGAATCGGGCGGCT...TCTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACCTCTTCCTGCAGTCTTTaGAGAACACCGACGAGCTGC +
Preference number: 4 (lower is better)
Translates to: AGSGRNPPQGSLFQAPDTSSCSL*RTPTSC
Trigger: GCAGCTCGTCGGTGTTCTGCAAAGACTGCAGGAAGA...GGTGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331302.12
ENST00000608278.2
ENST00000618002.4
ENST00000632616.1
CDS-3UTR GCA 90 bp AAGGGGTGCAGAAAGGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTCTTCCTGCAGTCTTTaGAGAACACCGACGAGCTGC +
Preference number: 4 (lower is better)
Translates to: KGCRKALSWGGRRLPTLVSSCSL*RTPTSC
Trigger: GCAGCTCGTCGGTGTTCTGCAAAGACTGCAGGAAGA...AACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCCTTTCTGCACCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331302.12
ENST00000618002.4
ENST00000632616.1
CDS-3UTR GCA 90 bp GATGCACCTGAACGCTGCTCTTCAGCAAGTGAGTTCATAGCATCCACCAGAGCTGGAGGGGGTGGCGGATaGAGACAGCTCCCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: DAPERCSSASEFIASTRAGGGGG*RQLPRR
Trigger: TCTCCTGGGGAGCTGTCTGCATCCGCCACCCCCTCC...AGCTCTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGCAGCTTCGGAGGCCGTaGCCTAGGTTTCATTTAGTC +
Preference number: 4 (lower is better)
Translates to: AGEADGSQHWFVESWPTGQLRRP*PRFHLV
Trigger: GACTAAATGAAACCTAGGGCACGGCCTCCGAAGCTG...CCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCCTTCCTGCAGTCTTTaGAGAACACCGACGAGCTGC +
Preference number: 4 (lower is better)
Translates to: GEADGSQHWFVESWPTGCPSCSL*RTPTSC
Trigger: GCAGCTCGTCGGTGTTCTGCAAAGACTGCAGGAAGG...ACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323434.12
ENST00000536489.6
ENST00000632000.1
ENST00000632545.1
CDS-3UTR GCA 90 bp CGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACTCTTCCAGACCTTCCTaGAGTCTTTGCAGAACACCG +
Preference number: 4 (lower is better)
Translates to: RAGSGRNPPQGSLFQAPDSSRPS*SLCRTP
Trigger: CGGTGTTCTGCAAAGACTGCAGGAAGGTCTGGAAGA...GTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000536489.6
ENST00000608519.5
ENST00000632000.1
ENST00000632545.1
CDS-3UTR GCA 90 bp GAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTGGGGTCTGGAGGGCGCTCTCTTTGCTCACTaGAGATCTTACACAGCCACA +
Preference number: 4 (lower is better)
Translates to: EGKFPEGSAQELLWGLEGALFAH*RSYTAT
Trigger: TGTGGCTGTGTAAGATCTGCAGTGAGCAAAGAGAGC...GCCCTCCAGACCCCAGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR CCA 90 bp TCCCAGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGCTACACAAATTCTGCTaGAGGCAGCTGTGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: SQLGEKALPDPGTRGLGQLHKFC*RQLCLG
Trigger: ACCAAGACACAGCTGCCTCCAGCAGAATTTGTGTAG...CTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGGGATGCACCTGAACGCTGCTCTTCAGCAAGTGAGTTCATAGCATCCACCAGATCCCGCTGCCGAAGATaGTGTCGGCCATGGCTCGGA +
Preference number: 4 (lower is better)
Translates to: GDAPERCSSASEFIASTRSRCRR*CRPWLG
Trigger: TCCGAGCCATGGCCGACACCATCTTCGGCAGCGGGA...TCTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACCAAGCTGCCGGTCATTaGGGCAAACCCACTGATCAT +
Preference number: 4 (lower is better)
Translates to: GRVWQESSTGKSVPGTRHQAAGH*GKPTDH
Trigger: ATGATCAGTGGGTTTGCCCCAATGACCGGCAGCTTG...GTGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTGCGGTGGCTCACAGCCCGTCTGCAGCTTaGCTCGAAGGGCAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: AGHEGIQRNLIGLGAVAHSPSAA*LEGQAA
Trigger: GGCAGCTTGCCCTTCGAGCCAAGCTGCAGACGGGCT...GTGAGCCACCGCACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACCTCGATCCCACATTTaGTGCAGACTTTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: PGRVWQESSTGKSVPGTRPRSHI*CRLSSC
Trigger: GCAGGAAGAAAGTCTGCACCAAATGTGGGATCGAGG...TCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331302.12
ENST00000608278.2
ENST00000618002.4
ENST00000632616.1
CDS-3UTR CCA 90 bp AGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCAGGGGCAAGATATACTTaGGGAGCCCTTTGTAGAACC +
Preference number: 4 (lower is better)
Translates to: RSRAGSGRNPPQGSLFQAGARYT*GALCRT
Trigger: GGTTCTACAAAGGGCTCCCCAAGTATATCTTGCCCC...TGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGTGGTCTCAGAGCTTCTaGGCTCTCGCTCTGCCGGTT +
Preference number: 4 (lower is better)
Translates to: EADGSQHWFVESWPTGCLWSQSF*ALALPV
Trigger: AACCGGCAGAGCGAGAGCCCAGAAGCTCTGAGACCA...CAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACCCACTGTCACTGTCACTaGAAACCACTCTTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: AGSGRNPPQGSLFQAPDTHCHCH*KPLFLG
Trigger: CCCGAGGAAGAGTGGTTTCCAGTGACAGTGACAGTG...GGTGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGGACGGCTCCCAACACTaGTTTGTTGAGTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: AGEADGSQHWFVESWPTGDGSQH*FVESWP
Trigger: TGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTC...CCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AAGGGGTGCAGAAAGGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTGACGGCTCCCAACACTaGTTTGTTGAGTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: KGCRKALSWGGRRLPTLVDGSQH*FVESWP
Trigger: TGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTC...AACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCCTTTCTGCACCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCAGGTAGATTGGGGGTGTaGGAGGGGAGGGTAATAAAT +
Preference number: 4 (lower is better)
Translates to: RSRAGSGRNPPQGSLFQAGRLGV*EGRVIN
Trigger: ATTTATTACCCTCCCCTCCCACACCCCCAATCTACC...TGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTAAAATTAACTGGGTGTaGTGGCGGGCATCTGTAATC +
Preference number: 4 (lower is better)
Translates to: DRSGRSRAGSGRNPPQGSKINWV*WRASVI
Trigger: GATTACAGATGCCCGCCACCACACCCAGTTAATTTT...ACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GGGGATGCACCTGAACGCTGCTCTTCAGCAAGTGAGTTCATAGCATCCACCAGACAACAGGGTGTCTGGTaGGGGCACAAGGACCGGTCA +
Preference number: 4 (lower is better)
Translates to: GDAPERCSSASEFIASTRQQGVW*GHKDRS
Trigger: TGACCGGTCCTTGTGCCCTCACCAGACACCCTGTTG...TCTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACAAACCAGGCAGGCCATaGGGGGATTCAAAGAAACCT +
Preference number: 4 (lower is better)
Translates to: GRVWQESSTGKSVPGTRHKPGRP*GDSKKP
Trigger: AGGTTTCTTTGAATCCCCTCATGGCCTGCCTGGTTT...GTGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACAAAACCAGGCAGGCCATaGGGGGATTCAAAGAAACCT +
Preference number: 4 (lower is better)
Translates to: GQGLAGILHREVCSRHQTKPGRP*GDSKKP
Trigger: AGGTTTCTTTGAATCCCCTCATGGCCTGCCTGGTTT...TGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GGGGATGCACCTGAACGCTGCTCTTCAGCAAGTGAGTTCATAGCATCCACCAGAGGCGGGCGGATCACTTaGGACCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: GDAPERCSSASEFIASTRGGRIT*DQEFKT
Trigger: GGTCTTGAACTCCTGGTCTCAAGTGATCCGCCCGCC...TCTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp CAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCCTTGGTAGCCTAATCTaGGGATCTCCAATTAGATGG +
Preference number: 4 (lower is better)
Translates to: QGGAGQGLAGILHREVCSLGSLI*GSPIRW
Trigger: CCATCTAATTGGAGATCCGCAGATTAGGCTACCAAG...GGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCTTGCTGTCTCCAAAGTaGACGTACAAGTGTCCACTA +
Preference number: 4 (lower is better)
Translates to: EEPGRVWQESSTGKSVPGLLSPK*TYKCPL
Trigger: TAGTGGACACTTGTACGTGCACTTTGGAGACAGCAA...GCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTCAAAGCTGTCAGCTaGAGGCCTCATGCTTGCTGT +
Preference number: 4 (lower is better)
Translates to: GEADGSQHWFVESWPTGCLKAVS*RPHACC
Trigger: ACAGCAAGCATGAGGCCTGCAGCTGACAGCTTTGAG...ACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGACTGATCATTCCCGCTaGCGAAGATGGTGTCGGCCA +
Preference number: 4 (lower is better)
Translates to: EADGSQHWFVESWPTGCLTDHSR*RRWCRP
Trigger: TGGCCGACACCATCTTCGGCAGCGGGAATGATCAGT...CAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR GCA 90 bp TTTACTGTTTGCCAGCAGCAAGGACAAAAAGTGAATGGTGGGGGCCCAGGAGCTTCCGCCGGGCTGAGGTaGTGCTTCCTCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: FTVCQQQGQKVNGGGPGASAGLR*CFLLCF
Trigger: GAAGCAGAGGAGGAAGCAGCACCTCAGCCCGGCGGA...AGCTCCTGGGCCCCCACCATTCACTTTTTGTCCTTGCTGCTGGCAAACAGTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp CCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGATGCAGACTTTCTTCCTaGAGTCTTTGCAGAACACCG +
Preference number: 4 (lower is better)
Translates to: PGRVWQESSTGKSVPGTRCRLSS*SLCRTP
Trigger: CGGTGTTCTGCAAAGACTGCAGGAAGAAAGTCTGCA...TCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331302.12
ENST00000608278.2
ENST00000618002.4
ENST00000632616.1
CDS-3UTR GCA 90 bp AGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCACCTCTCTTTGCTCACTaGAGATCTTACACAGCCACA +
Preference number: 4 (lower is better)
Translates to: REEPGRVWQESSTGKSVPPLFAH*RSYTAT
Trigger: TGTGGCTGTGTAAGATCTGCAGTGAGCAAAGAGAGG...TGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331302.12
ENST00000608278.2
ENST00000618002.4
ENST00000632616.1
CDS-3UTR GCA 90 bp GAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCTTCCAGACCTCTCTTTaGTCACTGCAGATCTTACAC +
Preference number: 4 (lower is better)
Translates to: EPGRVWQESSTGKSVPGTFQTSL*SLQILH
Trigger: GTGTAAGATCTGCAGTGAGCAAAGAGAGGTCTGGAA...GGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331302.12
ENST00000608278.2
ENST00000618002.4
ENST00000632616.1
CDS-3UTR GCA 90 bp GGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTGCGGTGGCTCACACCGGGCCCACGTGTAGATaGGGCTGGTCTCAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: GHEGIQRNLIGLGAVAHTGPTCR*GWSQSF
Trigger: GAAGCTCTGAGACCAGCCGCATCTACACGTGGGCCC...GGTGTGAGCCACCGCACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp AGGCTGAGCAAAAACCAGGCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGAGCAGCTGGAGGGGCCTaGTGGAGCTGCGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RLSKNQAGHEGIQRNLIGAAGGA*WSCVSS
Trigger: GCTGCTGACGCAGCTCCAGCAGGCCCCTCCAGCTGC...TCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGCCTGGTTTTTGCTCAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGGATGCACCTGAACGCTaGTCTTCAGCAAGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: AGEADGSQHWFVESWPTGDAPER*SSASEF
Trigger: GAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATC...CCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACTACACAAATTCTGCTaGAGGCAGCTGTGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: PGRVWQESSTGKSVPGTRLHKFC*RQLCLG
Trigger: ACCAAGACACAGCTGCCTCCAGCAGAATTTGTGTAG...TCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AAAGGTGAGCTGAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTGGGCAAGCTGCCGGTCATTaGGGCAAACCCACTGATCAT +
Preference number: 4 (lower is better)
Translates to: KGELRGSSRKAALRNYSGQAAGH*GKPTDH
Trigger: ATGATCAGTGGGTTTGCCCCAATGACCGGCAGCTTG...CCCAGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTCAGCTCACCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR CCA 90 bp TCAAAAGGTGAGCTGAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTTCACATTCCGCCTCATaGTCTCCAGCCGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: SKGELRGSSRKAALRNYSSHSAS*SPAAPP
Trigger: TGGTGGAGCGGCTGGAGACCATGAGGCGGAATGTGA...AGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTCAGCTCACCTTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR CCA 90 bp GATGCACCTGAACGCTGCTCTTCAGCAAGTGAGTTCATAGCATCCACCAGAGCTCCGCAGAGCAGACACTaGGACAGGCCGTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: DAPERCSSASEFIASTRAPQSRH*DRPFPI
Trigger: GATGGGGAACGGCCTGTCCCAGTGTCTGCTCTGCGG...AGCTCTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCCTCGATCCCACATTTaGTGCAGACTTTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: GTELGRQTAPNTGLLSHGPRSHI*CRLSSC
Trigger: GCAGGAAGAAAGTCTGCACCAAATGTGGGATCGAGG...GCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331302.12
ENST00000618002.4
ENST00000632616.1
CDS-3UTR CCA 90 bp GGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACAGGGGCAAGATATACTTaGGGAGCCCTTTGTAGAACC +
Preference number: 4 (lower is better)
Translates to: GQGLAGILHREVCSRHQTGARYT*GALCRT
Trigger: GGTTCTACAAAGGGCTCCCCAAGTATATCTTGCCCC...TGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACGGGGCAAGATATACTTaGGGAGCCCTTTGTAGAACC +
Preference number: 4 (lower is better)
Translates to: GRVWQESSTGKSVPGTRHGARYT*GALCRT
Trigger: GGTTCTACAAAGGGCTCCCCAAGTATATCTTGCCCC...GTGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GATGCACCTGAACGCTGCTCTTCAGCAAGTGAGTTCATAGCATCCACCAGAGCTGCTCTGCCGGTTCCGTaGGCAAAGGTCGGAAGTGGG +
Preference number: 4 (lower is better)
Translates to: DAPERCSSASEFIASTRAALPVP*AKVGSG
Trigger: CCCACTTCCGACCTTTGCCCACGGAACCGGCAGAGC...AGCTCTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp ACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAAACGTGTAGATGCGGCTaGTCTCAGAGCTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TELGRQTAPNTGLLSHGQTCRCG*SQSFWA
Trigger: AGCCCAGAAGCTCTGAGACCAGCCGCATCTACACGT...TTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCTGGTTTGTTGAGTCATaGCCAACAGGGTGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: GTELGRQTAPNTGLLSHGWFVES*PTGCLV
Trigger: CACCAGACACCCTGTTGGCCATGACTCAACAAACCA...GCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTAGAGAAGTGAATTCATaGCTGAGGGAGCCACGTGCC +
Preference number: 4 (lower is better)
Translates to: GEADGSQHWFVESWPTGCREVNS*LREPRA
Trigger: GGCACGTGGCTCCCTCAGCCATGAATTCACTTCTCT...ACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AAAGGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATCAGGAGCTCCCAGCTTaGAGAGAAGGCCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: KGTELGRQTAPNTGLLSHQELPA*REGPSR
Trigger: TCTGGAAGGGCCTTCTCTCCAAGCTGGGAGCTCCTG...ATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGGAGGACAAAAAGTGAATaGTGGGGGCCCAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: RQTAPNTGLLSHGQQGVWRTKSE*WGPRSS
Trigger: GGAGCTCCTGGGCCCCCACCATTCACTTTTTGTCCT...CCAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTAGCCAAACCAAGGCCTaGATTCTCCTCGTGGATGTC +
Preference number: 4 (lower is better)
Translates to: GEADGSQHWFVESWPTGCSQTKA*ILLVDV
Trigger: GACATCCACGAGGAGAATCCAGGCCTTGGTTTGGCT...ACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323434.12
ENST00000632000.1
CDS-3UTR TCA 90 bp GGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTAAACCAGGCAGGCCATaGGGGGATTCAAAGAAACCT +
Preference number: 4 (lower is better)
Translates to: GEADGSQHWFVESWPTGCKPGRP*GDSKKP
Trigger: AGGTTTCTTTGAATCCCCTCATGGCCTGCCTGGTTT...ACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGTGCCCATACTCTGAATaGAGTATTTTCATGCCAAGC +
Preference number: 4 (lower is better)
Translates to: GGAGQGLAGILHREVCSRCPYSE*SIFMPS
Trigger: GCTTGGCATGAAAATACTTCATTCAGAGTATGGGCA...CCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGGTGCCACAGGGAAAGTaGGTTTCTTTACTGTTTGCC +
Preference number: 4 (lower is better)
Translates to: AGEADGSQHWFVESWPTGVPQGK*VSLLFA
Trigger: GGCAAACAGTAAAGAAACTCACTTTCCCTGTGGCAC...CCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp CCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGATTGCTGTCTCCAAAGTaGACGTACAAGTGTCCACTA +
Preference number: 4 (lower is better)
Translates to: PGRVWQESSTGKSVPGTRLLSPK*TYKCPL
Trigger: TAGTGGACACTTGTACGTGCACTTTGGAGACAGCAA...TCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp AGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCATTGCTGTCTCCAAAGTaGACGTACAAGTGTCCACTA +
Preference number: 4 (lower is better)
Translates to: REEPGRVWQESSTGKSVPLLSPK*TYKCPL
Trigger: TAGTGGACACTTGTACGTGCACTTTGGAGACAGCAA...TGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GATGCACCTGAACGCTGCTCTTCAGCAAGTGAGTTCATAGCATCCACCAGAGCTGCTCGAAGGGCAAGCTaGCGGTCATTGGGGCAAACC +
Preference number: 4 (lower is better)
Translates to: DAPERCSSASEFIASTRAARRAS*RSLGQT
Trigger: GGTTTGCCCCAATGACCGGCAGCTTGCCCTTCGAGC...AGCTCTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACCTCTCTTTGCTCACTaGAGATCTTACACAGCCACA +
Preference number: 4 (lower is better)
Translates to: GQGLAGILHREVCSRHQTPLFAH*RSYTAT
Trigger: TGTGGCTGTGTAAGATCTGCAGTGAGCAAAGAGAGG...TGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331302.12
ENST00000608278.2
ENST00000618002.4
ENST00000632616.1
CDS-3UTR GCA 90 bp AGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCATTCCAGACCTCTCTTTaGTCACTGCAGATCTTACAC +
Preference number: 4 (lower is better)
Translates to: SRAGSGRNPPQGSLFQAPFQTSL*SLQILH
Trigger: GTGTAAGATCTGCAGTGAGCAAAGAGAGGTCTGGAA...TGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331302.12
ENST00000608278.2
ENST00000618002.4
ENST00000632616.1
CDS-3UTR GCA 90 bp AGTCTTGCCATTAATATAGCAACGGAGATAGCCCCACCGGGCGGCCCCTCTGACCAGCTTCGGAGGCCGTaGCCTAGGTTTCATTTAGTC +
Preference number: 4 (lower is better)
Translates to: SLAINIATEIAPPGGPSDQLRRP*PRFHLV
Trigger: GACTAAATGAAACCTAGGGCACGGCCTCCGAAGCTG...GTCAGAGGGGCCGCCCGGTGGGGCTATCTCCGTTGCTATATTAATGGCAAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTGGGGCAAGATATACTTaGGGAGCCCTTTGTAGAACC +
Preference number: 4 (lower is better)
Translates to: GEADGSQHWFVESWPTGCGARYT*GALCRT
Trigger: GGTTCTACAAAGGGCTCCCCAAGTATATCTTGCCCC...ACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTGCGGTGGCTCACTGGTCTCAGAGCTTCTaGGCTCTCGCTCTGCCGGTT +
Preference number: 4 (lower is better)
Translates to: AGHEGIQRNLIGLGAVAHWSQSF*ALALPV
Trigger: AACCGGCAGAGCGAGAGCCCAGAAGCTCTGAGACCA...GTGAGCCACCGCACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGCACTGTCACTGTCACTaGAAACCACTCTTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: EADGSQHWFVESWPTGCLHCHCH*KPLFLG
Trigger: CCCGAGGAAGAGTGGTTTCCAGTGACAGTGACAGTG...CAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp ACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACACTGTCACTGTCACTaGAAACCACTCTTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: TELGRQTAPNTGLLSHGQHCHCH*KPLFLG
Trigger: CCCGAGGAAGAGTGGTTTCCAGTGACAGTGACAGTG...TTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp ACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAAGACGGCTCCCAACACTaGTTTGTTGAGTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: TELGRQTAPNTGLLSHGQDGSQH*FVESWP
Trigger: TGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTC...TTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAAAAATTAACTGGGTGTaGTGGCGGGCATCTGTAATC +
Preference number: 4 (lower is better)
Translates to: SRAGSGRNPPQGSLFQAPKINWV*WRASVI
Trigger: GATTACAGATGCCCGCCACCACACCCAGTTAATTTT...TGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGAATACAAAAATTAACTaGGTGTGGTGGCGGGCATCT +
Preference number: 4 (lower is better)
Translates to: GGAGQGLAGILHREVCSRNTKIN*VWWRAS
Trigger: AGATGCCCGCCACCACACCCAGTTAATTTTTGTATT...CCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp ACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAAAGAGAAGTGAATTCATaGCTGAGGGAGCCACGTGCC +
Preference number: 4 (lower is better)
Translates to: TELGRQTAPNTGLLSHGQREVNS*LREPRA
Trigger: GGCACGTGGCTCCCTCAGCCATGAATTCACTTCTCT...TTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGAGAGAAGTGAATTCATaGCTGAGGGAGCCACGTGCC +
Preference number: 4 (lower is better)
Translates to: EADGSQHWFVESWPTGCLREVNS*LREPRA
Trigger: GGCACGTGGCTCCCTCAGCCATGAATTCACTTCTCT...CAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GATGCACCTGAACGCTGCTCTTCAGCAAGTGAGTTCATAGCATCCACCAGAGCTTTGGGGCAAACCCACTaGTCATTCCCGCTGCCGAAG +
Preference number: 4 (lower is better)
Translates to: DAPERCSSASEFIASTRALGQTH*SFPLPK
Trigger: CTTCGGCAGCGGGAATGATCAGTGGGTTTGCCCCAA...AGCTCTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp ACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACTGCTCTTCAGCAAGTaGGTTCATAGCATCCACCAG +
Preference number: 4 (lower is better)
Translates to: TELGRQTAPNTGLLSHGQLLFSK*VHSIHQ
Trigger: CTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAG...TTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp AAGGGGTGCAGAAAGGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTTGCTGTCTCCAAAGTaGACGTACAAGTGTCCACTA +
Preference number: 4 (lower is better)
Translates to: KGCRKALSWGGRRLPTLVLLSPK*TYKCPL
Trigger: TAGTGGACACTTGTACGTGCACTTTGGAGACAGCAA...AACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCCTTTCTGCACCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGCAATCGTGGTCTTCGATCAACACACTGGCTCGGTGCAAATTTTAATCTTCATGCAGCTGGAGGGGCCTaGTGGAGCTGCGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GNRGLRSTHWLGANFNLHAAGGA*WSCVSS
Trigger: GCTGCTGACGCAGCTCCAGCAGGCCCCTCCAGCTGC...ATGAAGATTAAAATTTGCACCGAGCCAGTGTGTTGATCGAAGACCACGATTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331302.12
ENST00000618002.4
CDS-3UTR GCA 90 bp AGCAAAAACCAGGCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTCCGGGAGGTGGAGGTTaGAGTGAGCCGCGATCGTGC +
Preference number: 4 (lower is better)
Translates to: SKNQAGHEGIQRNLIGLGPGGGG*SEPRSC
Trigger: GCACGATCGCGGCTCACTGCAACCTCCACCTCCCGG...ACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGCCTGGTTTTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp AGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGGGATGCACCTGAACGCTaGTCTTCAGCAAGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: RQTAPNTGLLSHGQQGVWDAPER*SSASEF
Trigger: GAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATC...CCAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp ACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCAATGAAGTATTTTCATaGCAAGCCAAACCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: TGQGGAGQGLAGILHREVNEVFS*QAKPPE
Trigger: TTCAGGAGGTTTGGCTTGGCATGAAAATACTTCATT...GACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp AGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGGTCTTCCAGACCTTCCTaGAGTCTTTGCAGAACACCG +
Preference number: 4 (lower is better)
Translates to: RQTAPNTGLLSHGQQGVWSSRPS*SLCRTP
Trigger: CGGTGTTCTGCAAAGACTGCAGGAAGGTCTGGAAGA...CCAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323434.12
ENST00000536489.6
ENST00000632000.1
ENST00000632545.1
CDS-3UTR GCA 90 bp GAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGTCTTCCAGACCTTCCTaGAGTCTTTGCAGAACACCG +
Preference number: 4 (lower is better)
Translates to: EADGSQHWFVESWPTGCLSSRPS*SLCRTP
Trigger: CGGTGTTCTGCAAAGACTGCAGGAAGGTCTGGAAGA...CAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323434.12
ENST00000536489.6
ENST00000632000.1
ENST00000632545.1
CDS-3UTR GCA 90 bp AGTCTTGCCATTAATATAGCAACGGAGATAGCCCCACCGGGCGGCCCCTCTGACTCTTCCAGACCTTCCTaGAGTCTTTGCAGAACACCG +
Preference number: 4 (lower is better)
Translates to: SLAINIATEIAPPGGPSDSSRPS*SLCRTP
Trigger: CGGTGTTCTGCAAAGACTGCAGGAAGGTCTGGAAGA...GTCAGAGGGGCCGCCCGGTGGGGCTATCTCCGTTGCTATATTAATGGCAAGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000323434.12
ENST00000632000.1
CDS-3UTR GCA 90 bp AAAGGTGAGCTGAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTGGGGCTCTCTTTGCTCACTaGAGATCTTACACAGCCACA +
Preference number: 4 (lower is better)
Translates to: KGELRGSSRKAALRNYSGALFAH*RSYTAT
Trigger: TGTGGCTGTGTAAGATCTGCAGTGAGCAAAGAGAGC...CCCAGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTCAGCTCACCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR CCA 90 bp AAAGGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATCAAGCTGCCGGTCATTaGGGCAAACCCACTGATCAT +
Preference number: 4 (lower is better)
Translates to: KGTELGRQTAPNTGLLSHQAAGH*GKPTDH
Trigger: ATGATCAGTGGGTTTGCCCCAATGACCGGCAGCTTG...ATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AGGCTGAGCAAAAACCAGGCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGACCGCAGAGCAGACACTaGGACAGGCCGTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: RLSKNQAGHEGIQRNLIGPQSRH*DRPFPI
Trigger: GATGGGGAACGGCCTGTCCCAGTGTCTGCTCTGCGG...TCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGCCTGGTTTTTGCTCAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGGCCTCGATCCCACATTTaGTGCAGACTTTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: RQTAPNTGLLSHGQQGVWPRSHI*CRLSSC
Trigger: GCAGGAAGAAAGTCTGCACCAAATGTGGGATCGAGG...CCAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331302.12
ENST00000618002.4
ENST00000632616.1
CDS-3UTR CCA 90 bp CGTTCTCTCTCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATTCCCCGTCTCACCACTaGCCAGGCTGCTCTGGCACC +
Preference number: 4 (lower is better)
Translates to: RSLSSGKGFPEAFAHTLNSPSHH*PGCSGT
Trigger: GGTGCCAGAGCAGCCTGGCCAGTGGTGAGACGGGGA...ATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGAGAGAGAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CGTTCTCTCTCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAGCCGGGCAGGGTCTaGCAGGAATCCTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: RSLSSGKGFPEAFAHTLNEPGRV*QESSTG
Trigger: CCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTC...ATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGAGAGAGAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGATTAACTGGGTGTGGTaGCGGGCATCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: EADGSQHWFVESWPTGCLINWVW*RASVIP
Trigger: TGGGATTACAGATGCCCGCCACCACACCCAGTTAAT...CAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AGCAAAAACCAGGCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTGGGAGCCACGTGCCCTaGCTGGGGATGCACCTGAAC +
Preference number: 4 (lower is better)
Translates to: SKNQAGHEGIQRNLIGLGGSHVP*LGMHLN
Trigger: GTTCAGGTGCATCCCCAGCCAGGGCACGTGGCTCCC...ACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGCCTGGTTTTTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GATGCACCTGAACGCTGCTCTTCAGCAAGTGAGTTCATAGCATCCACCAGAGCTCAGGAGCTCCCAGCTTaGAGAGAAGGCCCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: DAPERCSSASEFIASTRAQELPA*REGPSR
Trigger: TCTGGAAGGGCCTTCTCTCCAAGCTGGGAGCTCCTG...AGCTCTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTGCGGTGGCTCACAGGACAAAAAGTGAATaGTGGGGGCCCAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: AGHEGIQRNLIGLGAVAHRTKSE*WGPRSS
Trigger: GGAGCTCCTGGGCCCCCACCATTCACTTTTTGTCCT...GTGAGCCACCGCACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCAAACACAGGCAATCGTaGTCTTCGATCAACACACTG +
Preference number: 4 (lower is better)
Translates to: GTELGRQTAPNTGLLSHGKHRQS*SSINTL
Trigger: CAGTGTGTTGATCGAAGACCACGATTGCCTGTGTTT...GCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331302.12
ENST00000618002.4
CDS-3UTR CCA 90 bp GCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGTTGGGACTGTTAGTCTaGCCACTTTTACACATTTCA +
Preference number: 4 (lower is better)
Translates to: AGQGLAGILHREVCSRHQLGLLV*PLLHIS
Trigger: TGAAATGTGTAAAAGTGGCCAGACTAACAGTCCCAA...CTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323434.12
ENST00000632000.1
CDS-3UTR CCA 90 bp GGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTGCGGTGGCTCACACCCCTGGATTCTCCTCGTaGATGTCTGGTAAGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GHEGIQRNLIGLGAVAHTPGFSS*MSGKAP
Trigger: TGGGGCCTTACCAGACATCCACGAGGAGAATCCAGG...GGTGTGAGCCACCGCACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000323434.12
ENST00000632000.1
CDS-3UTR TCA 90 bp CGTTCTCTCTCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATAATAAGGTCGGGGGCTaGGGGCAGTGGTTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RSLSSGKGFPEAFAHTLNNKVGG*GQWLEG
Trigger: CCCCTCCAACCACTGCCCTCAGCCCCCGACCTTATT...ATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGAGAGAGAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp AGGCTGAGCAAAAACCAGGCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGAGGCTGGGGATGCACCTaGACGCTGCTCTTCAGCAAG +
Preference number: 4 (lower is better)
Translates to: RLSKNQAGHEGIQRNLIGGWGCT*TLLFSK
Trigger: CTTGCTGAAGAGCAGCGTTCAGGTGCATCCCCAGCC...TCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGCCTGGTTTTTGCTCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACATGCCCATACTCTGAATaGAGTATTTTCATGCCAAGC +
Preference number: 4 (lower is better)
Translates to: GQGLAGILHREVCSRHQTCPYSE*SIFMPS
Trigger: GCTTGGCATGAAAATACTTCATTCAGAGTATGGGCA...TGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTTGGTAGCCTAATCTaGGGATCTCCAATTAGATGG +
Preference number: 4 (lower is better)
Translates to: GEADGSQHWFVESWPTGCLGSLI*GSPIRW
Trigger: CCATCTAATTGGAGATCCGCAGATTAGGCTACCAAG...ACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GATGCACCTGAACGCTGCTCTTCAGCAAGTGAGTTCATAGCATCCACCAGAGCTCAGCTGCAGGCCTCATaGTTGCTGTCTCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: DAPERCSSASEFIASTRAQLQAS*LLSPKC
Trigger: GCACTTTGGAGACAGCAAGCATGAGGCCTGCAGCTG...AGCTCTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp TTTACTGTTTGCCAGCAGCAAGGACAAAAAGTGAATGGTGGGGGCCCAGGAGCTCAGCTGCAGGCCTCATaGTTGCTGTCTCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: FTVCQQQGQKVNGGGPGAQLQAS*LLSPKC
Trigger: GCACTTTGGAGACAGCAAGCATGAGGCCTGCAGCTG...AGCTCCTGGGCCCCCACCATTCACTTTTTGTCCTTGCTGCTGGCAAACAGTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp AAACACAGGATCCTGGAAACAGTCTCCAACTCAAAAGGTGAGCTGAGGGGAAGTGCTCGAAGGGCAAGCTaGCGGTCATTGGGGCAAACC +
Preference number: 4 (lower is better)
Translates to: KHRILETVSNSKGELRGSARRAS*RSLGQT
Trigger: GGTTTGCCCCAATGACCGGCAGCTTGCCCTTCGAGC...ACTTCCCCTCAGCTCACCTTTTGAGTTGGAGACTGTTTCCAGGATCCTGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR GCA 90 bp CGTTCTCTCTCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATGCCGGGCTGAGGTGCTaGTTCCTCCTCTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RSLSSGKGFPEAFAHTLNAGLRC*FLLCFS
Trigger: GGAGAAGCAGAGGAGGAAGCAGCACCTCAGCCCGGC...ATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGAGAGAGAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp ACGTTCTCTCTCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAAAGCCGCCCGATTCTCTaGTGCTCCAGGACGTCGAGC +
Preference number: 4 (lower is better)
Translates to: TFSLFREGFSRSICPYSESRPIL*CSRTSS
Trigger: GCTCGACGTCCTGGAGCAGCAGAGAATCGGGCGGCT...TTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGAGAGAGAACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp AGCAAAAACCAGGCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTAGCCGCCCGATTCTCTaGTGCTCCAGGACGTCGAGC +
Preference number: 4 (lower is better)
Translates to: SKNQAGHEGIQRNLIGLGSRPIL*CSRTSS
Trigger: GCTCGACGTCCTGGAGCAGCAGAGAATCGGGCGGCT...ACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGCCTGGTTTTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp AGTCTTGCCATTAATATAGCAACGGAGATAGCCCCACCGGGCGGCCCCTCTGACTGCAGACTTTCTTCCTaGAGTCTTTGCAGAACACCG +
Preference number: 4 (lower is better)
Translates to: SLAINIATEIAPPGGPSDCRLSS*SLCRTP
Trigger: CGGTGTTCTGCAAAGACTGCAGGAAGAAAGTCTGCA...GTCAGAGGGGCCGCCCGGTGGGGCTATCTCCGTTGCTATATTAATGGCAAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331302.12
ENST00000618002.4
ENST00000632616.1
CDS-3UTR GCA 90 bp AGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGGCCTCTCTTTGCTCACTaGAGATCTTACACAGCCACA +
Preference number: 4 (lower is better)
Translates to: RQTAPNTGLLSHGQQGVWPLFAH*RSYTAT
Trigger: TGTGGCTGTGTAAGATCTGCAGTGAGCAAAGAGAGG...CCAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000331302.12
ENST00000618002.4
ENST00000632616.1
CDS-3UTR GCA 90 bp GCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTGCGGTGGCTCACCAGCTTCGGAGGCCGTaGCCTAGGTTTCATTTAGTC +
Preference number: 4 (lower is better)
Translates to: AGHEGIQRNLIGLGAVAHQLRRP*PRFHLV
Trigger: GACTAAATGAAACCTAGGGCACGGCCTCCGAAGCTG...GTGAGCCACCGCACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp TCTCTCTCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAACCGGGAGGTGGAGGTTaGAGTGAGCCGCGATCGTGC +
Preference number: 4 (lower is better)
Translates to: SLSSGKGFPEAFAHTLNEPGGGG*SEPRSC
Trigger: GCACGATCGCGGCTCACTGCAACCTCCACCTCCCGG...TTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGAGAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AGCAAAAACCAGGCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTAGCCGCTCTGCCCTCTaGATGACCTGCAGGATGGCC +
Preference number: 4 (lower is better)
Translates to: SKNQAGHEGIQRNLIGLGSRSAL*MTCRMA
Trigger: GGCCATCCTGCAGGTCATCCAGAGGGCAGAGCGGCT...ACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGCCTGGTTTTTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp TCAAAAGGTGAGCTGAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTCCTCGATCCCACATTTaGTGCAGACTTTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: SKGELRGSSRKAALRNYSPRSHI*CRLSSC
Trigger: GCAGGAAGAAAGTCTGCACCAAATGTGGGATCGAGG...AGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTCAGCTCACCTTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR CCA 90 bp GGCAATCGTGGTCTTCGATCAACACACTGGCTCGGTGCAAATTTTAATCTTCATGAGCCGGGCAGGGTCTaGCAGGAATCCTCCACAGGG +
Preference number: 4 (lower is better)
Translates to: GNRGLRSTHWLGANFNLHEPGRV*QESSTG
Trigger: CCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTC...ATGAAGATTAAAATTTGCACCGAGCCAGTGTGTTGATCGAAGACCACGATTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331302.12
ENST00000618002.4
CDS-3UTR CCA 90 bp GCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTGCGGTGGCTCACGACGGCTCCCAACACTaGTTTGTTGAGTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: AGHEGIQRNLIGLGAVAHDGSQH*FVESWP
Trigger: TGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTC...GTGAGCCACCGCACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTAAAATTAACTGGGTGTaGTGGCGGGCATCTGTAATC +
Preference number: 4 (lower is better)
Translates to: GEADGSQHWFVESWPTGCKINWV*WRASVI
Trigger: GATTACAGATGCCCGCCACCACACCCAGTTAATTTT...ACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACAATACAAAAATTAACTaGGTGTGGTGGCGGGCATCT +
Preference number: 4 (lower is better)
Translates to: GRVWQESSTGKSVPGTRHNTKIN*VWWRAS
Trigger: AGATGCCCGCCACCACACCCAGTTAATTTTTGTATT...GTGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCATTGGGACTGTTAGTCTaGCCACTTTTACACATTTCA +
Preference number: 4 (lower is better)
Translates to: RSRAGSGRNPPQGSLFQALGLLV*PLLHIS
Trigger: TGAAATGTGTAAAAGTGGCCAGACTAACAGTCCCAA...TGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323434.12
ENST00000632000.1
CDS-3UTR CCA 90 bp GGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTGCGGTGGCTCACACCAGCCAAACCAAGGCCTaGATTCTCCTCGTGGATGTC +
Preference number: 4 (lower is better)
Translates to: GHEGIQRNLIGLGAVAHTSQTKA*ILLVDV
Trigger: GACATCCACGAGGAGAATCCAGGCCTTGGTTTGGCT...GGTGTGAGCCACCGCACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323434.12
ENST00000632000.1
CDS-3UTR TCA 90 bp AGGCTGAGCAAAAACCAGGCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGATCACTGCTCTGGCTCTaGTGCTCACCTCTAAGGGGC +
Preference number: 4 (lower is better)
Translates to: RLSKNQAGHEGIQRNLIGSLLWL*CSPLRG
Trigger: GCCCCTTAGAGGTGAGCATCAGAGCCAGAGCAGTGA...TCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGCCTGGTTTTTGCTCAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTGCGGTGGCTCACACCCTGCTCTTCAGCAAGTaGGTTCATAGCATCCACCAG +
Preference number: 4 (lower is better)
Translates to: GHEGIQRNLIGLGAVAHTLLFSK*VHSIHQ
Trigger: CTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAG...GGTGTGAGCCACCGCACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACCATTTGCCCATACTCTaGATGAAGTATTTTCATGCC +
Preference number: 4 (lower is better)
Translates to: GRVWQESSTGKSVPGTRHHLPIL*MKYFHA
Trigger: GGCATGAAAATACTTCATTCAGAGTATGGGCAAATG...GTGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp TCTCTCTCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAACACCGTTGTCGGGGGTaGCCCGAGGTGTTCCAGATG +
Preference number: 4 (lower is better)
Translates to: SLSSGKGFPEAFAHTLNEHRCRG*PEVFQM
Trigger: CATCTGGAACACCTCGGGTCACCCCCGACAACGGTG...TTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGAGAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000323434.12
ENST00000618002.4
ENST00000632000.1
CDS-3UTR GCA 90 bp AGTCTTGCCATTAATATAGCAACGGAGATAGCCCCACCGGGCGGCCCCTCTGACCTTGGTAGCCTAATCTaGGGATCTCCAATTAGATGG +
Preference number: 4 (lower is better)
Translates to: SLAINIATEIAPPGGPSDLGSLI*GSPIRW
Trigger: CCATCTAATTGGAGATCCGCAGATTAGGCTACCAAG...GTCAGAGGGGCCGCCCGGTGGGGCTATCTCCGTTGCTATATTAATGGCAAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp TCTCTCTCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAATCCGCCGGGCTGAGGTaGTGCTTCCTCCTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SLSSGKGFPEAFAHTLNESAGLR*CFLLCF
Trigger: GAAGCAGAGGAGGAAGCAGCACCTCAGCCCGGCGGA...TTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGAGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp ACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAATTCCAGACCTCTCTTTaGTCACTGCAGATCTTACAC +
Preference number: 4 (lower is better)
Translates to: TELGRQTAPNTGLLSHGQFQTSL*SLQILH
Trigger: GTGTAAGATCTGCAGTGAGCAAAGAGAGGTCTGGAA...TTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331302.12
ENST00000618002.4
ENST00000632616.1
CDS-3UTR GCA 90 bp TTTACTGTTTGCCAGCAGCAAGGACAAAAAGTGAATGGTGGGGGCCCAGGAGCTCAGCTTCGGAGGCCGTaGCCTAGGTTTCATTTAGTC +
Preference number: 4 (lower is better)
Translates to: FTVCQQQGQKVNGGGPGAQLRRP*PRFHLV
Trigger: GACTAAATGAAACCTAGGGCACGGCCTCCGAAGCTG...AGCTCCTGGGCCCCCACCATTCACTTTTTGTCCTTGCTGCTGGCAAACAGTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp CTTTACTGTTTGCCAGCAGCAAGGACAAAAAGTGAATGGTGGGGGCCCAGGAGCGATGCACCTGAACGCTaGTCTTCAGCAAGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: LYCLPAARTKSEWWGPRSDAPER*SSASEF
Trigger: GAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATC...GCTCCTGGGCCCCCACCATTCACTTTTTGTCCTTGCTGCTGGCAAACAGTAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTGCGGTGGCTCACGATGCACCTGAACGCTaGTCTTCAGCAAGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: AGHEGIQRNLIGLGAVAHDAPER*SSASEF
Trigger: GAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATC...GTGAGCCACCGCACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAAGTATTTTCATGCCAAGCCAGATGGTGTCGGCCATaGCTCGGAGCACCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: GFPEAFAHTLNEVFSCQARWCRP*LGAPGW
Trigger: CCAGCCGGGTGCTCCGAGCCATGGCCGACACCATCT...GGCTTGGCATGAAAATACTTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGGGATGCACCTGAACGCTGCTCTTCAGCAAGTGAGTTCATAGCATCCACCAGACCTCGATCCCACATTTaGTGCAGACTTTCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: GDAPERCSSASEFIASTRPRSHI*CRLSSC
Trigger: GCAGGAAGAAAGTCTGCACCAAATGTGGGATCGAGG...TCTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331302.12
ENST00000618002.4
ENST00000632616.1
CDS-3UTR CCA 90 bp GGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTGCGGTGGCTCACACCGGTAGATTGGGGGTGTaGGAGGGGAGGGTAATAAAT +
Preference number: 4 (lower is better)
Translates to: GHEGIQRNLIGLGAVAHTGRLGV*EGRVIN
Trigger: ATTTATTACCCTCCCCTCCCACACCCCCAATCTACC...GGTGTGAGCCACCGCACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp TTTACTGTTTGCCAGCAGCAAGGACAAAAAGTGAATGGTGGGGGCCCAGGAGCTAGAGAAGTGAATTCATaGCTGAGGGAGCCACGTGCC +
Preference number: 4 (lower is better)
Translates to: FTVCQQQGQKVNGGGPGAREVNS*LREPRA
Trigger: GGCACGTGGCTCCCTCAGCCATGAATTCACTTCTCT...AGCTCCTGGGCCCCCACCATTCACTTTTTGTCCTTGCTGCTGGCAAACAGTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTGCGGTGGCTCACACCCCACTACACAAATTCTaGTGGAGGCAGCTGTGTCTT +
Preference number: 4 (lower is better)
Translates to: GHEGIQRNLIGLGAVAHTPLHKF*WRQLCL
Trigger: AAGACACAGCTGCCTCCAGCAGAATTTGTGTAGTGG...GGTGTGAGCCACCGCACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp AGGCTGAGCAAAAACCAGGCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGACAGCTGCAGGCCTCATaGTTGCTGTCTCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: RLSKNQAGHEGIQRNLIGQLQAS*LLSPKC
Trigger: GCACTTTGGAGACAGCAAGCATGAGGCCTGCAGCTG...TCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGCCTGGTTTTTGCTCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp TCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAAGTATTTCGCCCGATTCTCTGCTaGTCCAGGACGTCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: SSGKGFPEAFAHTLNEVFRPILC*SRTSSR
Trigger: GCGGCTCGACGTCCTGGAGCAGCAGAGAATCGGGCG...AAATACTTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp GGGGATGCACCTGAACGCTGCTCTTCAGCAAGTGAGTTCATAGCATCCACCAGACCTCTCTTTGCTCACTaGAGATCTTACACAGCCACA +
Preference number: 4 (lower is better)
Translates to: GDAPERCSSASEFIASTRPLFAH*RSYTAT
Trigger: TGTGGCTGTGTAAGATCTGCAGTGAGCAAAGAGAGG...TCTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331302.12
ENST00000618002.4
ENST00000632616.1
CDS-3UTR GCA 90 bp AAGGGGTGCAGAAAGGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTAATGAAGTATTTTCATaGCAAGCCAAACCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: KGCRKALSWGGRRLPTLVNEVFS*QAKPPE
Trigger: TTCAGGAGGTTTGGCTTGGCATGAAAATACTTCATT...AACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCCTTTCTGCACCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAAGTATTTTCATGCCAAGCCAGCCCGTCTGCAGCTTaGCTCGAAGGGCAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GFPEAFAHTLNEVFSCQASPSAA*LEGQAA
Trigger: GGCAGCTTGCCCTTCGAGCCAAGCTGCAGACGGGCT...GGCTTGGCATGAAAATACTTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGCAATCGTGGTCTTCGATCAACACACTGGCTCGGTGCAAATTTTAATCTTCATGGCAAAGGTCGGAAGTaGGGGTCATCAGCTCGGCCA +
Preference number: 4 (lower is better)
Translates to: GNRGLRSTHWLGANFNLHGKGRK*GSSARP
Trigger: TGGCCGAGCTGATGACCCCCACTTCCGACCTTTGCC...ATGAAGATTAAAATTTGCACCGAGCCAGTGTGTTGATCGAAGACCACGATTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000331302.12
ENST00000618002.4
CDS-3UTR CCA 90 bp AGGCTGAGCAAAAACCAGGCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGAACGTGTAGATGCGGCTaGTCTCAGAGCTTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RLSKNQAGHEGIQRNLIGTCRCG*SQSFWA
Trigger: AGCCCAGAAGCTCTGAGACCAGCCGCATCTACACGT...TCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGCCTGGTTTTTGCTCAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GATGCACCTGAACGCTGCTCTTCAGCAAGTGAGTTCATAGCATCCACCAGAGCTTGGTTTGTTGAGTCATaGCCAACAGGGTGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: DAPERCSSASEFIASTRAWFVES*PTGCLV
Trigger: CACCAGACACCCTGTTGGCCATGACTCAACAAACCA...AGCTCTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGAATACAAAAATTAACTaGGTGTGGTGGCGGGCATCT +
Preference number: 4 (lower is better)
Translates to: EADGSQHWFVESWPTGCLNTKIN*VWWRAS
Trigger: AGATGCCCGCCACCACACCCAGTTAATTTTTGTATT...CAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp TCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAAGTATTTAATAAGGTCGGGGGCTaGGGGCAGTGGTTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: SSGKGFPEAFAHTLNEVFNKVGG*GQWLEG
Trigger: CCCCTCCAACCACTGCCCTCAGCCCCCGACCTTATT...AAATACTTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp AAAGGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATTGCCCATACTCTGAATaGAGTATTTTCATGCCAAGC +
Preference number: 4 (lower is better)
Translates to: KGTELGRQTAPNTGLLSHCPYSE*SIFMPS
Trigger: GCTTGGCATGAAAATACTTCATTCAGAGTATGGGCA...ATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGCATTTGCCCATACTCTaGATGAAGTATTTTCATGCC +
Preference number: 4 (lower is better)
Translates to: EADGSQHWFVESWPTGCLHLPIL*MKYFHA
Trigger: GGCATGAAAATACTTCATTCAGAGTATGGGCAAATG...CAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp TTTACTGTTTGCCAGCAGCAAGGACAAAAAGTGAATGGTGGGGGCCCAGGAGCTGTGCCACAGGGAAAGTaGGTTTCTTTACTGTTTGCC +
Preference number: 4 (lower is better)
Translates to: FTVCQQQGQKVNGGGPGAVPQGK*VSLLFA
Trigger: GGCAAACAGTAAAGAAACTCACTTTCCCTGTGGCAC...AGCTCCTGGGCCCCCACCATTCACTTTTTGTCCTTGCTGCTGGCAAACAGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp CGTTCTCTCTCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATCCGAGGTGTTCCAGATaGGGAGCTGAATCACTGGGA +
Preference number: 4 (lower is better)
Translates to: RSLSSGKGFPEAFAHTLNPRCSR*GAESLG
Trigger: TCCCAGTGATTCAGCTCCTCATCTGGAACACCTCGG...ATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGAGAGAGAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323434.12
ENST00000618002.4
ENST00000632000.1
CDS-3UTR GCA 90 bp GCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTGCGGTGGCTCACTTCCAGACCTCTCTTTaGTCACTGCAGATCTTACAC +
Preference number: 4 (lower is better)
Translates to: AGHEGIQRNLIGLGAVAHFQTSL*SLQILH
Trigger: GTGTAAGATCTGCAGTGAGCAAAGAGAGGTCTGGAA...GTGAGCCACCGCACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331302.12
ENST00000618002.4
ENST00000632616.1
CDS-3UTR CCA 90 bp GATGCACCTGAACGCTGCTCTTCAGCAAGTGAGTTCATAGCATCCACCAGAGCTCTACACAAATTCTGCTaGAGGCAGCTGTGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: DAPERCSSASEFIASTRALHKFC*RQLCLG
Trigger: ACCAAGACACAGCTGCCTCCAGCAGAATTTGTGTAG...AGCTCTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp TCTCTCTCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAATCACATTCCGCCTCATaGTCTCCAGCCGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: SLSSGKGFPEAFAHTLNESHSAS*SPAAPP
Trigger: TGGTGGAGCGGCTGGAGACCATGAGGCGGAATGTGA...TTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGAGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp AAAGGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATAATACAAAAATTAACTaGGTGTGGTGGCGGGCATCT +
Preference number: 4 (lower is better)
Translates to: KGTELGRQTAPNTGLLSHNTKIN*VWWRAS
Trigger: AGATGCCCGCCACCACACCCAGTTAATTTTTGTATT...ATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp AGCAAAAACCAGGCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTCCAACACTGGTTTGTTaGGTCATGGCCAACAGGGTG +
Preference number: 4 (lower is better)
Translates to: SKNQAGHEGIQRNLIGLGPTLVC*VMANRV
Trigger: CACCCTGTTGGCCATGACTCAACAAACCAGTGTTGG...ACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGCCTGGTTTTTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp CTTTACTGTTTGCCAGCAGCAAGGACAAAAAGTGAATGGTGGGGGCCCAGGAGCTGCCCATACTCTGAATaGAGTATTTTCATGCCAAGC +
Preference number: 4 (lower is better)
Translates to: LYCLPAARTKSEWWGPRSCPYSE*SIFMPS
Trigger: GCTTGGCATGAAAATACTTCATTCAGAGTATGGGCA...GCTCCTGGGCCCCCACCATTCACTTTTTGTCCTTGCTGCTGGCAAACAGTAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTGCGGTGGCTCACTGCCCATACTCTGAATaGAGTATTTTCATGCCAAGC +
Preference number: 4 (lower is better)
Translates to: AGHEGIQRNLIGLGAVAHCPYSE*SIFMPS
Trigger: GCTTGGCATGAAAATACTTCATTCAGAGTATGGGCA...GTGAGCCACCGCACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp ACGTTCTCTCTCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAACAGCTTCGGAGGCCGTaGCCTAGGTTTCATTTAGTC +
Preference number: 4 (lower is better)
Translates to: TFSLFREGFSRSICPYSEQLRRP*PRFHLV
Trigger: GACTAAATGAAACCTAGGGCACGGCCTCCGAAGCTG...TTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGAGAGAGAACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp ACGTTCTCTCTCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAACAAGCTGCCGGTCATTaGGGCAAACCCACTGATCAT +
Preference number: 4 (lower is better)
Translates to: TFSLFREGFSRSICPYSEQAAGH*GKPTDH
Trigger: ATGATCAGTGGGTTTGCCCCAATGACCGGCAGCTTG...TTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGAGAGAGAACGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp AAACACAGGATCCTGGAAACAGTCTCCAACTCAAAAGGTGAGCTGAGGGGAAGTTGCAGACTTTCTTCCTaGAGTCTTTGCAGAACACCG +
Preference number: 4 (lower is better)
Translates to: KHRILETVSNSKGELRGSCRLSS*SLCRTP
Trigger: CGGTGTTCTGCAAAGACTGCAGGAAGAAAGTCTGCA...ACTTCCCCTCAGCTCACCTTTTGAGTTGGAGACTGTTTCCAGGATCCTGTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR CCA 90 bp TCTCTCTCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAACAAGCTGCCGGTCATTaGGGCAAACCCACTGATCAT +
Preference number: 4 (lower is better)
Translates to: SLSSGKGFPEAFAHTLNEQAAGH*GKPTDH
Trigger: ATGATCAGTGGGTTTGCCCCAATGACCGGCAGCTTG...TTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGAGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp TCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAAGTATTTTCACATTCCGCCTCATaGTCTCCAGCCGCTCCACCA +
Preference number: 4 (lower is better)
Translates to: SSGKGFPEAFAHTLNEVFSHSAS*SPAAPP
Trigger: TGGTGGAGCGGCTGGAGACCATGAGGCGGAATGTGA...AAATACTTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGCAATCGTGGTCTTCGATCAACACACTGGCTCGGTGCAAATTTTAATCTTCATCACTGTCACTGTCACTaGAAACCACTCTTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: GNRGLRSTHWLGANFNLHHCHCH*KPLFLG
Trigger: CCCGAGGAAGAGTGGTTTCCAGTGACAGTGACAGTG...ATGAAGATTAAAATTTGCACCGAGCCAGTGTGTTGATCGAAGACCACGATTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331302.12
ENST00000618002.4
CDS-3UTR TCA 90 bp GGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAAGTATTTTCATGCCAAGCCCCAACACTGGTTTGTTaGGTCATGGCCAACAGGGTG +
Preference number: 4 (lower is better)
Translates to: GFPEAFAHTLNEVFSCQAPTLVC*VMANRV
Trigger: CACCCTGTTGGCCATGACTCAACAAACCAGTGTTGG...GGCTTGGCATGAAAATACTTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp TCTCTCTCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAAAAACCAGGCAGGCCATaGGGGGATTCAAAGAAACCT +
Preference number: 4 (lower is better)
Translates to: SLSSGKGFPEAFAHTLNEKPGRP*GDSKKP
Trigger: AGGTTTCTTTGAATCCCCTCATGGCCTGCCTGGTTT...TTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGAGAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp TCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAAGTATTTCCTTCCTGCAGTCTTTaGAGAACACCGACGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSGKGFPEAFAHTLNEVFPSCSL*RTPTSC
Trigger: GCAGCTCGTCGGTGTTCTGCAAAGACTGCAGGAAGG...AAATACTTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323434.12
ENST00000632000.1
CDS-3UTR CCA 90 bp GGCAATCGTGGTCTTCGATCAACACACTGGCTCGGTGCAAATTTTAATCTTCATATTAACTGGGTGTGGTaGCGGGCATCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: GNRGLRSTHWLGANFNLHINWVW*RASVIP
Trigger: TGGGATTACAGATGCCCGCCACCACACCCAGTTAAT...ATGAAGATTAAAATTTGCACCGAGCCAGTGTGTTGATCGAAGACCACGATTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331302.12
ENST00000618002.4
3UTR CAA 72 bp ATAACGTGCCACAGGGAAAGTGAGTTTCTTTACTGTTaGCCAGCAGCAAGGACAAAAAGTGAATGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: ITCHRESEFLYC*PAARTKSEWWG
Trigger: CCCCCACCATTCACTTTTTGTCCTTGCTGCTGGCAAACAGTAAAGAAACTCACTTTCCCTGTGGCACGTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp GGCAATCGTGGTCTTCGATCAACACACTGGCTCGGTGCAAATTTTAATCTTCATGTGCCACAGGGAAAGTaGGTTTCTTTACTGTTTGCC +
Preference number: 4 (lower is better)
Translates to: GNRGLRSTHWLGANFNLHVPQGK*VSLLFA
Trigger: GGCAAACAGTAAAGAAACTCACTTTCCCTGTGGCAC...ATGAAGATTAAAATTTGCACCGAGCCAGTGTGTTGATCGAAGACCACGATTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331302.12
ENST00000618002.4
CDS-3UTR GCA 90 bp TCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAAGTATTTTCTTCCTGCAGTCTTTaGAGAACACCGACGAGCTGC +
Preference number: 4 (lower is better)
Translates to: SSGKGFPEAFAHTLNEVFSSCSL*RTPTSC
Trigger: GCAGCTCGTCGGTGTTCTGCAAAGACTGCAGGAAGA...AAATACTTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331302.12
ENST00000618002.4
ENST00000632616.1
CDS-3UTR GCA 90 bp TCTCTCTCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAATGCAGACTTTCTTCCTaGAGTCTTTGCAGAACACCG +
Preference number: 4 (lower is better)
Translates to: SLSSGKGFPEAFAHTLNECRLSS*SLCRTP
Trigger: CGGTGTTCTGCAAAGACTGCAGGAAGAAAGTCTGCA...TTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGAGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331302.12
ENST00000618002.4
ENST00000632616.1
CDS-3UTR GCA 90 bp GATGCACCTGAACGCTGCTCTTCAGCAAGTGAGTTCATAGCATCCACCAGAGCTAATGAAGTATTTTCATaGCAAGCCAAACCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: DAPERCSSASEFIASTRANEVFS*QAKPPE
Trigger: TTCAGGAGGTTTGGCTTGGCATGAAAATACTTCATT...AGCTCTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CGTTCTCTCTCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATAAACACAGGCAATCGTaGTCTTCGATCAACACACTG +
Preference number: 4 (lower is better)
Translates to: RSLSSGKGFPEAFAHTLNKHRQS*SSINTL
Trigger: CAGTGTGTTGATCGAAGACCACGATTGCCTGTGTTT...ATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGAGAGAGAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000331302.12
ENST00000618002.4
CDS-3UTR CCA 90 bp AAACACAGGATCCTGGAAACAGTCTCCAACTCAAAAGGTGAGCTGAGGGGAAGTGAAAACACAGGATCCTaGAAACAGTCTCCAACTCAA +
Preference number: 4 (lower is better)
Translates to: KHRILETVSNSKGELRGSENTGS*KQSPTQ
Trigger: TTGAGTTGGAGACTGTTTCCAGGATCCTGTGTTTTC...ACTTCCCCTCAGCTCACCTTTTGAGTTGGAGACTGTTTCCAGGATCCTGTGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR GCA 90 bp GGCAATCGTGGTCTTCGATCAACACACTGGCTCGGTGCAAATTTTAATCTTCATCTTGGTAGCCTAATCTaGGGATCTCCAATTAGATGG +
Preference number: 4 (lower is better)
Translates to: GNRGLRSTHWLGANFNLHLGSLI*GSPIRW
Trigger: CCATCTAATTGGAGATCCGCAGATTAGGCTACCAAG...ATGAAGATTAAAATTTGCACCGAGCCAGTGTGTTGATCGAAGACCACGATTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000331302.12
CDS-3UTR CCA 90 bp GGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAAGTATTTTCATGCCAAGCCCTACACAAATTCTGCTaGAGGCAGCTGTGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: GFPEAFAHTLNEVFSCQALHKFC*RQLCLG
Trigger: ACCAAGACACAGCTGCCTCCAGCAGAATTTGTGTAG...GGCTTGGCATGAAAATACTTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp TCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAAGTATTTATTAACTGGGTGTGGTaGCGGGCATCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: SSGKGFPEAFAHTLNEVFINWVW*RASVIP
Trigger: TGGGATTACAGATGCCCGCCACCACACCCAGTTAAT...AAATACTTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp CGTTCTCTCTCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATAATACAAAAATTAACTaGGTGTGGTGGCGGGCATCT +
Preference number: 4 (lower is better)
Translates to: RSLSSGKGFPEAFAHTLNNTKIN*VWWRAS
Trigger: AGATGCCCGCCACCACACCCAGTTAATTTTTGTATT...ATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGAGAGAGAACG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp AGCAAAAACCAGGCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTCATTTGCCCATACTCTaGATGAAGTATTTTCATGCC +
Preference number: 4 (lower is better)
Translates to: SKNQAGHEGIQRNLIGLGHLPIL*MKYFHA
Trigger: GGCATGAAAATACTTCATTCAGAGTATGGGCAAATG...ACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGCCTGGTTTTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CCA 90 bp GGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAAGTATTTTCATGCCAAGCCAAAATTAACTGGGTGTaGTGGCGGGCATCTGTAATC +
Preference number: 4 (lower is better)
Translates to: GFPEAFAHTLNEVFSCQAKINWV*WRASVI
Trigger: GATTACAGATGCCCGCCACCACACCCAGTTAATTTT...GGCTTGGCATGAAAATACTTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR TCA 90 bp TCTCTCTCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAACATTTGCCCATACTCTaGATGAAGTATTTTCATGCC +
Preference number: 4 (lower is better)
Translates to: SLSSGKGFPEAFAHTLNEHLPIL*MKYFHA
Trigger: GGCATGAAAATACTTCATTCAGAGTATGGGCAAATG...TTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGAGAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR GCA 90 bp ACGTTCTCTCTCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAAAATGAAGTATTTTCATaGCAAGCCAAACCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: TFSLFREGFSRSICPYSENEVFS*QAKPPE
Trigger: TTCAGGAGGTTTGGCTTGGCATGAAAATACTTCATT...TTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGAGAGAGAACGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS CCA 90 bp CCACTGGCCAGGCTGCTCTGGCACCCAGAGAGGTGGCCCGGCGGGTaGGTGAACCCCATCCTGGGGGCCTCCACGCTGCCACCTGACTCC +
Preference number: 5 (lower is better)
Translates to: PLARLLWHPERWPGG*VNPILGASTLPPDS
Trigger: GGAGTCAGGTGGCAGCGTGGAGGCCCCCAGGATGGGGTTCACCCACCCGCCGGGCCACCTCTCTGGGTGCCAGAGCAGCCTGGCCAGTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000570893.5
ENST00000572075.5
ENST00000576001.5
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000631558.1
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
ENST00000633922.1
ENST00000634166.1
CDS CCA 90 bp CCACTGGCCAGGCTGCTCTGGCACCCAGAGAGGTGGCCCGGCGGGTaGGTGAACCCCATCCTGGGGGCCTCCACGCTGCCACCTGTGGGA +
Preference number: 5 (lower is better)
Translates to: PLARLLWHPERWPGG*VNPILGASTLPPVG
Trigger: TCCCACAGGTGGCAGCGTGGAGGCCCCCAGGATGGGGTTCACCCACCCGCCGGGCCACCTCTCTGGGTGCCAGAGCAGCCTGGCCAGTGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572965.1
ENST00000631722.1
CDS TCA 90 bp TGGCCAGGCTGCTCTGGCACCCAGAGAGGTGGCCCGGCGGGTGGGTaGACCCCATCCTGGGGGCCTCCACGCTGCCACCTGACTCCTTCC +
Preference number: 5 (lower is better)
Translates to: WPGCSGTQRGGPAGG*TPSWGPPRCHLTPS
Trigger: GGAAGGAGTCAGGTGGCAGCGTGGAGGCCCCCAGGATGGGGTTCACCCACCCGCCGGGCCACCTCTCTGGGTGCCAGAGCAGCCTGGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000570893.5
ENST00000572075.5
ENST00000576001.5
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000631558.1
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
ENST00000633922.1
ENST00000634166.1
CDS TCA 90 bp TGGCCAGGCTGCTCTGGCACCCAGAGAGGTGGCCCGGCGGGTGGGTaGACCCCATCCTGGGGGCCTCCACGCTGCCACCTGTGGGAAATC +
Preference number: 5 (lower is better)
Translates to: WPGCSGTQRGGPAGG*TPSWGPPRCHLWEI
Trigger: GATTTCCCACAGGTGGCAGCGTGGAGGCCCCCAGGATGGGGTTCACCCACCCGCCGGGCCACCTCTCTGGGTGCCAGAGCAGCCTGGCCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000572965.1
ENST00000631722.1
CDS GCA 90 bp CACCAGCCGCCCGATTCTCTGCTGCTCCAGGACGTCGAGCCGCTCTaGCCTCTGGATGACCTGCAGGATGGCCTCCACCTCCGCCGGGCT +
Preference number: 5 (lower is better)
Translates to: HQPPDSLLLQDVEPL*PLDDLQDGLHLRRA
Trigger: AGCCCGGCGGAGGTGGAGGCCATCCTGCAGGTCATCCAGAGGGCAGAGCGGCTCGACGTCCTGGAGCAGCAGAGAATCGGGCGGCTGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 41 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000570638.5
ENST00000573588.5
ENST00000573780.5
ENST00000574722.5
ENST00000574953.5
ENST00000575130.5
ENST00000575634.5
ENST00000575736.5
ENST00000576420.5
ENST00000577079.5
ENST00000608278.2
ENST00000608519.5
ENST00000609977.5
ENST00000618002.4
ENST00000631901.1
ENST00000632000.1
ENST00000632071.1
ENST00000632083.1
ENST00000632176.1
ENST00000632337.1
ENST00000632545.1
ENST00000632576.1
ENST00000632610.1
ENST00000632616.1
ENST00000632671.1
ENST00000632678.1
ENST00000632735.1
ENST00000633046.1
ENST00000633168.1
ENST00000633184.1
ENST00000633301.1
ENST00000633332.1
ENST00000633726.1
ENST00000633744.1
ENST00000633904.1
ENST00000634024.1
ENST00000634042.1
ENST00000634169.1
CDS CCA 90 bp ACAGGGAAGTCTGTTCCAGGCACCAGACACCTCAGCCCAGGCAGCTaGAGGGGCCTGCTGGAGCTGCGTCAGCAGCGGGGGCTCGTCCAG +
Preference number: 5 (lower is better)
Translates to: TGKSVPGTRHLSPGS*RGLLELRQQRGLVQ
Trigger: CTGGACGAGCCCCCGCTGCTGACGCAGCTCCAGCAGGCCCCTCCAGCTGCCTGGGCTGAGGTGTCTGGTGCCTGGAACAGACTTCCCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000572075.5
ENST00000572965.1
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000631722.1
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
ENST00000633922.1
CDS-3UTR CAA 90 bp CGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTCCCTCCCACCACCGTaGTCGGGGGTGACCCGAGGT +
Preference number: 5 (lower is better)
Translates to: RSGRSRAGSGRNPPQGSLSLPPP*SGVTRG
Trigger: ACCTCGGGTCACCCCCGACAACGGTGGTGGGAGGGA...CAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CAA 90 bp GGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCCTCCCACCACCGTaGTCGGGGGTGACCCGAGGT +
Preference number: 5 (lower is better)
Translates to: GQGGAGQGLAGILHREVCSLPPP*SGVTRG
Trigger: ACCTCGGGTCACCCCCGACAACGGTGGTGGGAGGGA...ACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CAA 90 bp GAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCTCCCTCCCACCACCGTaGTCGGGGGTGACCCGAGGT +
Preference number: 5 (lower is better)
Translates to: EPGRVWQESSTGKSVPGTSLPPP*SGVTRG
Trigger: ACCTCGGGTCACCCCCGACAACGGTGGTGGGAGGGA...GGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CAA 90 bp CGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGCAGCCCGTCTGCAGCTaGGCTCGAAGGGCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: RSGRSRAGSGRNPPQGSLQPVCS*ARRASC
Trigger: GCAGCTTGCCCTTCGAGCCAAGCTGCAGACGGGCTG...CAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS CCA 90 bp TGCGGCTGGTCTCAGAGCTTCTGGGCTCTCGCTCTGCCGGTTCCGTaGGCAAAGGTCGGAAGTGGGGGTCATCAGCTCGGCCAGGGGTCT +
Preference number: 5 (lower is better)
Translates to: CGWSQSFWALALPVP*AKVGSGGHQLGQGS
Trigger: AGACCCCTGGCCGAGCTGATGACCCCCACTTCCGACCTTTGCCCACGGAACCGGCAGAGCGAGAGCCCAGAAGCTCTGAGACCAGCCGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 17 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000570893.5
ENST00000570954.1
ENST00000576001.5
ENST00000576420.5
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000631558.1
ENST00000631957.1
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
ENST00000634166.1
ENST00000634169.1
CDS CCA 90 bp CCCGTGGAGAGGGCCTGGAGGCTTCGCAGGTGGCGCCTGCAGGGCTaGAAGAGAGGCTTCATCCCAAGTGCTAAATCTGAGCTGGCGCCC +
Preference number: 5 (lower is better)
Translates to: PVERAWRLRRWRLQG*KRGFIPSAKSELAP
Trigger: GGGCGCCAGCTCAGATTTAGCACTTGGGATGAAGCCTCTCTTCCAGCCCTGCAGGCGCCACCTGCGAAGCCTCCAGGCCCTCTCCACGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000574011.1
ENST00000633160.1
ENST00000634090.1
CDS-3UTR CAA 90 bp TCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCTCCCTCCCACCACCGTaGTCGGGGGTGACCCGAGGT +
Preference number: 5 (lower is better)
Translates to: SGRSRAGSGRNPPQGSLFSLPPP*SGVTRG
Trigger: ACCTCGGGTCACCCCCGACAACGGTGGTGGGAGGGA...GAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CAA 90 bp GGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGCAGCCCGTCTGCAGCTaGGCTCGAAGGGCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: GRSRAGSGRNPPQGSLFQQPVCS*ARRASC
Trigger: GCAGCTTGCCCTTCGAGCCAAGCTGCAGACGGGCTG...CTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CAA 90 bp GAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCCAGCCCGTCTGCAGCTaGGCTCGAAGGGCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: EPGRVWQESSTGKSVPGTQPVCS*ARRASC
Trigger: GCAGCTTGCCCTTCGAGCCAAGCTGCAGACGGGCTG...GGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS CCA 90 bp CTCTTCCTCGGGCCCACGTGTAGATGCGGCTGGTCTCAGAGCTTCTaGGCTCTCGCTCTGCCGGTTCCGTGGGCAAAGGTCGGAAGTGGG +
Preference number: 5 (lower is better)
Translates to: LFLGPTCRCGWSQSF*ALALPVPWAKVGSG
Trigger: CCCACTTCCGACCTTTGCCCACGGAACCGGCAGAGCGAGAGCCCAGAAGCTCTGAGACCAGCCGCATCTACACGTGGGCCCGAGGAAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000570893.5
ENST00000570954.1
ENST00000576001.5
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000631558.1
ENST00000631957.1
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
ENST00000634166.1
CDS-3UTR CAA 90 bp TCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGCCCGTCTGCAGCTaGGCTCGAAGGGCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: SGRSRAGSGRNPPQGSLFQPVCS*ARRASC
Trigger: GCAGCTTGCCCTTCGAGCCAAGCTGCAGACGGGCTG...GAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CAA 90 bp CCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGACTCCTTCCAGGGTTaGTCGCCTTTCCGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: PVREEPGRVWQESSTGKSDSFQG*SPFRSL
Trigger: CAGGGACCGGAAAGGCGACAAACCCTGGAAGGAGTC...AGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CAA 90 bp CGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGGACTCCTTCCAGGGTTaGTCGCCTTTCCGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: RSGRSRAGSGRNPPQGSLDSFQG*SPFRSL
Trigger: CAGGGACCGGAAAGGCGACAAACCCTGGAAGGAGTC...CAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS GCA 90 bp CCACGTGTAGATGCGGCTGGTCTCAGAGCTTCTGGGCTCTCGCTCTaGCGGTTCCGTGGGCAAAGGTCGGAAGTGGGGGTCATCAGCTCG +
Preference number: 5 (lower is better)
Translates to: PRVDAAGLRASGLSL*RFRGQRSEVGVISS
Trigger: CGAGCTGATGACCCCCACTTCCGACCTTTGCCCACGGAACCGGCAGAGCGAGAGCCCAGAAGCTCTGAGACCAGCCGCATCTACACGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 17 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000570893.5
ENST00000570954.1
ENST00000576001.5
ENST00000576420.5
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000631558.1
ENST00000631957.1
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
ENST00000634166.1
ENST00000634169.1
CDS CCA 90 bp AGAGCAGACACTGGGACAGGCCGTTCCCCATCACATTCCGCCTCATaGTCTCCAGCCGCTCCACCAGCCGCCCGATTCTCTGCTGCTCCA +
Preference number: 5 (lower is better)
Translates to: RADTGTGRSPSHSAS*SPAAPPAARFSAAP
Trigger: TGGAGCAGCAGAGAATCGGGCGGCTGGTGGAGCGGCTGGAGACCATGAGGCGGAATGTGATGGGGAACGGCCTGTCCCAGTGTCTGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 35 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000570638.5
ENST00000573780.5
ENST00000574722.5
ENST00000574953.5
ENST00000575130.5
ENST00000575736.5
ENST00000576420.5
ENST00000577079.5
ENST00000608278.2
ENST00000608519.5
ENST00000609977.5
ENST00000618002.4
ENST00000631901.1
ENST00000632000.1
ENST00000632083.1
ENST00000632176.1
ENST00000632337.1
ENST00000632545.1
ENST00000632610.1
ENST00000632616.1
ENST00000632671.1
ENST00000632678.1
ENST00000632735.1
ENST00000633184.1
ENST00000633301.1
ENST00000633332.1
ENST00000633726.1
ENST00000633744.1
ENST00000633904.1
ENST00000634024.1
ENST00000634042.1
ENST00000634169.1
CDS-3UTR CAA 90 bp CCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTCTGCAGGCCTCATGCTaGCTGTCTCCAAAGTGCACG +
Preference number: 5 (lower is better)
Translates to: PVREEPGRVWQESSTGKSLQASC*LSPKCT
Trigger: CGTGCACTTTGGAGACAGCAAGCATGAGGCCTGCAG...AGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CAA 90 bp GGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAGCCCGTCTGCAGCTaGGCTCGAAGGGCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: GTELGRQTAPNTGLLSHGQPVCS*ARRASC
Trigger: GCAGCTTGCCCTTCGAGCCAAGCTGCAGACGGGCTG...GCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CAA 90 bp GGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACCAGCCCGTCTGCAGCTaGGCTCGAAGGGCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: GRVWQESSTGKSVPGTRHQPVCS*ARRASC
Trigger: GCAGCTTGCCCTTCGAGCCAAGCTGCAGACGGGCTG...GTGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CAA 90 bp GAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCGACTCCTTCCAGGGTTaGTCGCCTTTCCGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: EPGRVWQESSTGKSVPGTDSFQG*SPFRSL
Trigger: CAGGGACCGGAAAGGCGACAAACCCTGGAAGGAGTC...GGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CAA 90 bp GGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTGACTCCTTCCAGGGTTaGTCGCCTTTCCGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: GQGGAGQGLAGILHREVCDSFQG*SPFRSL
Trigger: CAGGGACCGGAAAGGCGACAAACCCTGGAAGGAGTC...ACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CAA 90 bp GGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGACTCCTTCCAGGGTTaGTCGCCTTTCCGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: GRSRAGSGRNPPQGSLFQDSFQG*SPFRSL
Trigger: CAGGGACCGGAAAGGCGACAAACCCTGGAAGGAGTC...CTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CAA 90 bp AGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGAGGGACTCCTTCCAGGGTTaGTCGCCTTTCCGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: SLERRPFQTQEPGVWGRRDSFQG*SPFRSL
Trigger: CAGGGACCGGAAAGGCGACAAACCCTGGAAGGAGTC...CCTCCTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CAA 90 bp GGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACGACTCCTTCCAGGGTTaGTCGCCTTTCCGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: GAGQGLAGILHREVCSRHDSFQG*SPFRSL
Trigger: CAGGGACCGGAAAGGCGACAAACCCTGGAAGGAGTC...GTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS TCA 90 bp AGCTTGGCTCGAAGGGCAAGCTGCCGGTCATTGGGGCAAACCCACTaGTCATTCCCGCTGCCGAAGATGGTGTCGGCCATGGCTCGGAGC +
Preference number: 5 (lower is better)
Translates to: SLARRASCRSLGQTH*SFPLPKMVSAMARS
Trigger: GCTCCGAGCCATGGCCGACACCATCTTCGGCAGCGGGAATGATCAGTGGGTTTGCCCCAATGACCGGCAGCTTGCCCTTCGAGCCAAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 42 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000570638.5
ENST00000573448.1
ENST00000573588.5
ENST00000573780.5
ENST00000574722.5
ENST00000575130.5
ENST00000575634.5
ENST00000575736.5
ENST00000576420.5
ENST00000577079.5
ENST00000608278.2
ENST00000608519.5
ENST00000609977.5
ENST00000618002.4
ENST00000631901.1
ENST00000632000.1
ENST00000632071.1
ENST00000632083.1
ENST00000632176.1
ENST00000632337.1
ENST00000632511.1
ENST00000632545.1
ENST00000632576.1
ENST00000632610.1
ENST00000632616.1
ENST00000632678.1
ENST00000632735.1
ENST00000633046.1
ENST00000633168.1
ENST00000633184.1
ENST00000633301.1
ENST00000633332.1
ENST00000633726.1
ENST00000633744.1
ENST00000633904.1
ENST00000634024.1
ENST00000634042.1
ENST00000634137.1
ENST00000634169.1
CDS GCA 90 bp CCCCTGAGCACTCTCTGCCCAGAAAATGCCCAAGTGCTCCCAGGCTaGCGGGCACCTGGCTTGGGACGGGCAGTATCGAGCATTCATGCT +
Preference number: 5 (lower is better)
Translates to: PLSTLCPENAQVLPG*RAPGLGRAVSSIHA
Trigger: AGCATGAATGCTCGATACTGCCCGTCCCAAGCCAGGTGCCCGGCAGCCTGGGAGCACTTGGGCATTTTCTGGGCAGAGAGTGCTCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000573448.1
ENST00000632511.1
ENST00000634137.1
CDS CCA 90 bp ACCAGCCCGTCTGCAGCTTGGCTCGAAGGGCAAGCTGCCGGTCATTaGGGCAAACCCACTGATCATTCCCGCTGCCGAAGATGGTGTCGG +
Preference number: 5 (lower is better)
Translates to: TSPSAAWLEGQAAGH*GKPTDHSRCRRWCR
Trigger: CCGACACCATCTTCGGCAGCGGGAATGATCAGTGGGTTTGCCCCAATGACCGGCAGCTTGCCCTTCGAGCCAAGCTGCAGACGGGCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 42 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000570638.5
ENST00000573448.1
ENST00000573588.5
ENST00000573780.5
ENST00000574722.5
ENST00000575130.5
ENST00000575634.5
ENST00000575736.5
ENST00000576420.5
ENST00000577079.5
ENST00000608278.2
ENST00000608519.5
ENST00000609977.5
ENST00000618002.4
ENST00000631901.1
ENST00000632000.1
ENST00000632071.1
ENST00000632083.1
ENST00000632176.1
ENST00000632337.1
ENST00000632511.1
ENST00000632545.1
ENST00000632576.1
ENST00000632610.1
ENST00000632616.1
ENST00000632678.1
ENST00000632735.1
ENST00000633046.1
ENST00000633168.1
ENST00000633184.1
ENST00000633301.1
ENST00000633332.1
ENST00000633726.1
ENST00000633744.1
ENST00000633904.1
ENST00000634024.1
ENST00000634042.1
ENST00000634137.1
ENST00000634169.1
CDS CCA 90 bp TGTCACTGGAAACCACTCTTCCTCGGGCCCACGTGTAGATGCGGCTaGTCTCAGAGCTTCTGGGCTCTCGCTCTGCCGGTTCCGTGGGCA +
Preference number: 5 (lower is better)
Translates to: CHWKPLFLGPTCRCG*SQSFWALALPVPWA
Trigger: TGCCCACGGAACCGGCAGAGCGAGAGCCCAGAAGCTCTGAGACCAGCCGCATCTACACGTGGGCCCGAGGAAGAGTGGTTTCCAGTGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000570893.5
ENST00000570954.1
ENST00000576001.5
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000631558.1
ENST00000631957.1
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
ENST00000634166.1
CDS CCA 90 bp AAGGCAGACGATCCTCCCGTGGAGAGGGCCTGGAGGCTTCGCAGGTaGCGCCTGCAGGGCTGGAAGAGAGGCTTCATCCCAAGTGCTAAA +
Preference number: 5 (lower is better)
Translates to: KADDPPVERAWRLRR*RLQGWKRGFIPSAK
Trigger: TTTAGCACTTGGGATGAAGCCTCTCTTCCAGCCCTGCAGGCGCCACCTGCGAAGCCTCCAGGCCCTCTCCACGGGAGGATCGTCTGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000574011.1
ENST00000633160.1
ENST00000634090.1
CDS CCA 90 bp GCCACAGGGGCCGCTTCTGGCCAGGGGAGGCCTCGATCCCACATTTaGTGCAGACTTTCTCCACCTCGCCTCCGTTTCTTCACCTGCAAC +
Preference number: 5 (lower is better)
Translates to: ATGAASGQGRPRSHI*CRLSPPRLRFFTCN
Trigger: GTTGCAGGTGAAGAAACGGAGGCGAGGTGGAGAAAGTCTGCACCAAATGTGGGATCGAGGCCTCCCCTGGCCAGAAGCGGCCCCTGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000570954.1
ENST00000631957.1
ENST00000632056.1
CDS-3UTR CAA 90 bp AGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACTCCTTCCAGGGTTaGTCGCCTTTCCGGTCCCTG +
Preference number: 5 (lower is better)
Translates to: SRAGSGRNPPQGSLFQAPDSFQG*SPFRSL
Trigger: CAGGGACCGGAAAGGCGACAAACCCTGGAAGGAGTC...TGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CAA 90 bp GGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACAGAGGGCAGCCCTCTTaGGGACTGTTAGTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: GAGQGLAGILHREVCSRHRGQPS*GLLVWP
Trigger: TGGCCAGACTAACAGTCCCAAAGAGGGCTGCCCTCT...GTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323434.12
ENST00000632000.1
CDS-3UTR CAA 90 bp GGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGAGAGGGCAGCCCTCTTaGGGACTGTTAGTCTGGCCA +
Preference number: 5 (lower is better)
Translates to: GRSRAGSGRNPPQGSLFQRGQPS*GLLVWP
Trigger: TGGCCAGACTAACAGTCCCAAAGAGGGCTGCCCTCT...CTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000323434.12
ENST00000632000.1
CDS-3UTR CAA 90 bp ACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCACCTTCCTGCAGTCTTaGCAGAACACCGACGAGCTG +
Preference number: 5 (lower is better)
Translates to: TGQGGAGQGLAGILHREVTFLQS*QNTDEL
Trigger: CAGCTCGTCGGTGTTCTGCAAAGACTGCAGGAAGGT...GACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000536489.6
ENST00000608519.5
ENST00000632000.1
ENST00000632545.1
CDS-3UTR CAA 90 bp GACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTACCTTCCTGCAGTCTTaGCAGAACACCGACGAGCTG +
Preference number: 5 (lower is better)
Translates to: DRSGRSRAGSGRNPPQGSTFLQS*QNTDEL
Trigger: CAGCTCGTCGGTGTTCTGCAAAGACTGCAGGAAGGT...ACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000536489.6
ENST00000608519.5
ENST00000632000.1
ENST00000632545.1
CDS-3UTR CAA 90 bp TCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCGCACCCGGCTGGGGGTaGGGAGTCACATCTTTTCCA +
Preference number: 5 (lower is better)
Translates to: SGRSRAGSGRNPPQGSLFAPGWG*GVTSFP
Trigger: TGGAAAAGATGTGACTCCCAACCCCCAGCCGGGTGC...GAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000632000.1
ENST00000632616.1
CDS GCA 90 bp TGTCACTGTCACTGGAAACCACTCTTCCTCGGGCCCACGTGTAGATaGGGCTGGTCTCAGAGCTTCTGGGCTCTCGCTCTGCCGGTTCCG +
Preference number: 5 (lower is better)
Translates to: CHCHWKPLFLGPTCR*GWSQSFWALALPVP
Trigger: CGGAACCGGCAGAGCGAGAGCCCAGAAGCTCTGAGACCAGCCGCATCTACACGTGGGCCCGAGGAAGAGTGGTTTCCAGTGACAGTGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000570893.5
ENST00000570954.1
ENST00000576001.5
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000631558.1
ENST00000631957.1
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
ENST00000634166.1
CDS GCA 90 bp ACCTCTTCCAGACCTTCCTGCAGTCTTTGCAGAACACCGACGAGCTaGCCAGGAAGCCCAGCACCTCCCCGCAGAGCAGACACTGGGACA +
Preference number: 5 (lower is better)
Translates to: TSSRPSCSLCRTPTS*PGSPAPPRRADTGT
Trigger: TGTCCCAGTGTCTGCTCTGCGGGGAGGTGCTGGGCTTCCTGGGCAGCTCGTCGGTGTTCTGCAAAGACTGCAGGAAGGTCTGGAAGAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000536489.6
ENST00000574722.5
ENST00000608519.5
ENST00000632000.1
ENST00000632176.1
ENST00000632545.1
CDS GCA 90 bp ACAGGGGCCGCTTCTGGCCAGGGGAGGCCTCGATCCCACATTTGGTaGAGACTTTCTCCACCTCGCCTCCGTTTCTTCACCTGCAACGAG +
Preference number: 5 (lower is better)
Translates to: TGAASGQGRPRSHIW*RLSPPRLRFFTCNE
Trigger: CTCGTTGCAGGTGAAGAAACGGAGGCGAGGTGGAGAAAGTCTGCACCAAATGTGGGATCGAGGCCTCCCCTGGCCAGAAGCGGCCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000570954.1
ENST00000631957.1
ENST00000632056.1
CDS CCA 90 bp TGCAGGGCTGGAAGAGAGGCTTCATCCCAAGTGCTAAATCTGAGCTaGCGCCCAGAGGGCTGGGTTGAAAAGGGGCTGGAGGCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: CRAGREASSQVLNLS*RPEGWVEKGLEAAS
Trigger: GGAGGCAGCCTCCAGCCCCTTTTCAACCCAGCCCTCTGGGCGCCAGCTCAGATTTAGCACTTGGGATGAAGCCTCTCTTCCAGCCCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574011.1
ENST00000633160.1
ENST00000634090.1
CDS-3UTR CAA 90 bp GTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCTGCAGGCCTCATGCTaGCTGTCTCCAAAGTGCACG +
Preference number: 5 (lower is better)
Translates to: VREEPGRVWQESSTGKSVLQASC*LSPKCT
Trigger: CGTGCACTTTGGAGACAGCAAGCATGAGGCCTGCAG...AACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CAA 90 bp AGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCACTGCAGGCCTCATGCTaGCTGTCTCCAAAGTGCACG +
Preference number: 5 (lower is better)
Translates to: SRAGSGRNPPQGSLFQAPLQASC*LSPKCT
Trigger: CGTGCACTTTGGAGACAGCAAGCATGAGGCCTGCAG...TGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CAA 90 bp GAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGCAGCCCGTCTGCAGCTaGGCTCGAAGGGCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: EADGSQHWFVESWPTGCLQPVCS*ARRASC
Trigger: GCAGCTTGCCCTTCGAGCCAAGCTGCAGACGGGCTG...CAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CAA 90 bp ACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGCCCGTCTGCAGCTaGGCTCGAAGGGCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: TELGRQTAPNTGLLSHGQQPVCS*ARRASC
Trigger: GCAGCTTGCCCTTCGAGCCAAGCTGCAGACGGGCTG...TTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CAA 90 bp CCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTTTCTTCCTGCAGTCTTaGCAGAACACCGACGAGCTG +
Preference number: 5 (lower is better)
Translates to: PVREEPGRVWQESSTGKSFFLQS*QNTDEL
Trigger: CAGCTCGTCGGTGTTCTGCAAAGACTGCAGGAAGAA...AGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331302.12
ENST00000608278.2
ENST00000618002.4
ENST00000632616.1
CDS-3UTR CAA 90 bp CCCAGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGAGAAACCTAATAGGATaGGGTGCGGTGGCTCACACC +
Preference number: 5 (lower is better)
Translates to: PSLERRPFQTQEPGVWGRRNLIG*GAVAHT
Trigger: GGTGTGAGCCACCGCACCCAATCCTATTAGGTTTCT...CCTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CAA 90 bp AGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGGGCACCCGGCTGGGGGTaGGGAGTCACATCGGGAACA +
Preference number: 5 (lower is better)
Translates to: RQTAPNTGLLSHGQQGVWAPGWG*GVTSGT
Trigger: TGTTCCCGATGTGACTCCCAACCCCCAGCCGGGTGC...CCAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000632545.1
CDS GCA 90 bp TGGTGCAGACTTTCTTCCTGCAGTCTTTGCAGAACACCGACGAGCTaGCCAGGAAGCCCAGCACCTCCCCGCAGAGCAGACACTGGGACA +
Preference number: 5 (lower is better)
Translates to: WCRLSSCSLCRTPTS*PGSPAPPRRADTGT
Trigger: TGTCCCAGTGTCTGCTCTGCGGGGAGGTGCTGGGCTTCCTGGGCAGCTCGTCGGTGTTCTGCAAAGACTGCAGGAAGAAAGTCTGCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENST00000331302.12
ENST00000570638.5
ENST00000573780.5
ENST00000574953.5
ENST00000575736.5
ENST00000576420.5
ENST00000577079.5
ENST00000608278.2
ENST00000618002.4
ENST00000631901.1
ENST00000632083.1
ENST00000632610.1
ENST00000632616.1
ENST00000632671.1
ENST00000632678.1
ENST00000632735.1
ENST00000633301.1
ENST00000633726.1
ENST00000633904.1
ENST00000634024.1
ENST00000634042.1
ENST00000634169.1
CDS GCA 90 bp GTGACCAGAATAATACGTAGGTACCTGTGGCCCCTGAGCACTCTCTaGCCAGAAAATGCCCAAGTGCTCCCAGGCTGCCGGGCACCTGGC +
Preference number: 5 (lower is better)
Translates to: VTRIIRRYLWPLSTL*PENAQVLPGCRAPG
Trigger: GCCAGGTGCCCGGCAGCCTGGGAGCACTTGGGCATTTTCTGGGCAGAGAGTGCTCAGGGGCCACAGGTACCTACGTATTATTCTGGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000573448.1
ENST00000632511.1
ENST00000634137.1
CDS-3UTR CAA 90 bp TCAAAAGGTGAGCTGAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTCAGCCCGTCTGCAGCTaGGCTCGAAGGGCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: SKGELRGSSRKAALRNYSQPVCS*ARRASC
Trigger: GCAGCTTGCCCTTCGAGCCAAGCTGCAGACGGGCTG...AGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTCAGCTCACCTTTTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR CAA 90 bp GAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTGGGGTCTGGAGGGCTTCTTCCTGCAGTCTTaGCAGAACACCGACGAGCTG +
Preference number: 5 (lower is better)
Translates to: EGKFPEGSAQELLWGLEGFFLQS*QNTDEL
Trigger: CAGCTCGTCGGTGTTCTGCAAAGACTGCAGGAAGAA...GCCCTCCAGACCCCAGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR CAA 90 bp GGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGCCCAACACTGGTTTGTaGAGTCATGGCCAACAGGGT +
Preference number: 5 (lower is better)
Translates to: GRSRAGSGRNPPQGSLFQPNTGL*SHGQQG
Trigger: ACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGG...CTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CAA 90 bp GGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTCCCAACACTGGTTTGTaGAGTCATGGCCAACAGGGT +
Preference number: 5 (lower is better)
Translates to: GQGGAGQGLAGILHREVCPNTGL*SHGQQG
Trigger: ACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGG...ACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CAA 90 bp GAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCCCCAACACTGGTTTGTaGAGTCATGGCCAACAGGGT +
Preference number: 5 (lower is better)
Translates to: EPGRVWQESSTGKSVPGTPNTGL*SHGQQG
Trigger: ACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGG...GGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CAA 90 bp AGCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGAGGGCTCCCAACACTGGTTaGTTGAGTCATGGCCAACAG +
Preference number: 5 (lower is better)
Translates to: SLERRPFQTQEPGVWGRRAPNTG*LSHGQQ
Trigger: CTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGC...CCTCCTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CAA 90 bp GAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCGCTCCCAACACTGGTTaGTTGAGTCATGGCCAACAG +
Preference number: 5 (lower is better)
Translates to: EPGRVWQESSTGKSVPGTAPNTG*LSHGQQ
Trigger: CTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGC...GGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CAA 90 bp GGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTTCATCACCAGGTAGATaGGGGGTGTGGGAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: GEADGSQHWFVESWPTGCSSPGR*GVWEGR
Trigger: CCTCCCCTCCCACACCCCCAATCTACCTGGTGATGA...ACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CAA 90 bp TCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCACCTTCCTGCAGTCTTaGCAGAACACCGACGAGCTG +
Preference number: 5 (lower is better)
Translates to: SGRSRAGSGRNPPQGSLFTFLQS*QNTDEL
Trigger: CAGCTCGTCGGTGTTCTGCAAAGACTGCAGGAAGGT...GAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000536489.6
ENST00000608519.5
ENST00000632000.1
ENST00000632545.1
CDS CCA 90 bp AACTCGCCTGGGCAGGTTAGTGACTGCCCTGAGGTCACAGCTCGCTaGCACCAACTTGGGCAGAGCTGGGAACTCCGAAGCTGTAGAAAC +
Preference number: 5 (lower is better)
Translates to: NSPGQVSDCPEVTAR*HQLGQSWELRSCRN
Trigger: GTTTCTACAGCTTCGGAGTTCCCAGCTCTGCCCAAGTTGGTGCCAGCGAGCTGTGACCTCAGGGCAGTCACTAACCTGCCCAGGCGAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572866.1
ENST00000632722.1
ENST00000633196.1
CDS-3UTR CAA 90 bp GAGCTGAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTGGGGTCTGGTTCTTCCTGCAGTCTTaGCAGAACACCGACGAGCTG +
Preference number: 5 (lower is better)
Translates to: ELRGSSRKAALRNYSGVWFFLQS*QNTDEL
Trigger: CAGCTCGTCGGTGTTCTGCAAAGACTGCAGGAAGAA...CCAGACCCCAGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTCAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR CAA 90 bp AGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCATTCTTCCTGCAGTCTTaGCAGAACACCGACGAGCTG +
Preference number: 5 (lower is better)
Translates to: SRAGSGRNPPQGSLFQAPFFLQS*QNTDEL
Trigger: CAGCTCGTCGGTGTTCTGCAAAGACTGCAGGAAGAA...TGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331302.12
ENST00000608278.2
ENST00000618002.4
ENST00000632616.1
CDS-3UTR CAA 90 bp TCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCGCCTCGATCCCACATTaGGTGCAGACTTTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: SGRSRAGSGRNPPQGSLFASIPH*VQTFFL
Trigger: CAGGAAGAAAGTCTGCACCAAATGTGGGATCGAGGC...GAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331302.12
ENST00000608278.2
ENST00000618002.4
ENST00000632616.1
CDS-3UTR CAA 90 bp TCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCCCAACACTGGTTTGTaGAGTCATGGCCAACAGGGT +
Preference number: 5 (lower is better)
Translates to: SGRSRAGSGRNPPQGSLFPNTGL*SHGQQG
Trigger: ACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGG...GAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CAA 90 bp CGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACCCCAACACTGGTTTGTaGAGTCATGGCCAACAGGGT +
Preference number: 5 (lower is better)
Translates to: RAGSGRNPPQGSLFQAPDPNTGL*SHGQQG
Trigger: ACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGG...GTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CAA 90 bp CGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACGCTCCCAACACTGGTTaGTTGAGTCATGGCCAACAG +
Preference number: 5 (lower is better)
Translates to: RAGSGRNPPQGSLFQAPDAPNTG*LSHGQQ
Trigger: CTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGC...GTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CAA 90 bp AGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGCTCCCAACACTGGTTaGTTGAGTCATGGCCAACAG +
Preference number: 5 (lower is better)
Translates to: REEPGRVWQESSTGKSVPAPNTG*LSHGQQ
Trigger: CTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGC...TGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CAA 90 bp AGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAAGAAACCTAATAGGATaGGGTGCGGTGGCTCACACC +
Preference number: 5 (lower is better)
Translates to: REEPGRVWQESSTGKSVPRNLIG*GAVAHT
Trigger: GGTGTGAGCCACCGCACCCAATCCTATTAGGTTTCT...TGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CAA 90 bp AGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGGGCACCCGGCTGGGGGTaGGGAGTCACATCTTTTCCA +
Preference number: 5 (lower is better)
Translates to: RQTAPNTGLLSHGQQGVWAPGWG*GVTSFP
Trigger: TGGAAAAGATGTGACTCCCAACCCCCAGCCGGGTGC...CCAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000632000.1
ENST00000632616.1
CDS TCA 90 bp CTCCCTCCCACCACCGTTGTCGGGGGTGACCCGAGGTGTTCCAGATaGGGAGCTGAATCACTGGGACTTAAGTCAATAAGTGGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: LPPTTVVGGDPRCSR*GAESLGLKSISGSH
Trigger: GTGGCTGCCACTTATTGACTTAAGTCCCAGTGATTCAGCTCCTCATCTGGAACACCTCGGGTCACCCCCGACAACGGTGGTGGGAGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323434.12
ENST00000632000.1
ENST00000633184.1
CDS-3UTR CAA 90 bp GGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGCTTCCAGACCTCTCTTaGCTCACTGCAGATCTTACA +
Preference number: 5 (lower is better)
Translates to: GRSRAGSGRNPPQGSLFQLPDLS*LTADLT
Trigger: TGTAAGATCTGCAGTGAGCAAAGAGAGGTCTGGAAG...CTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331302.12
ENST00000608278.2
ENST00000618002.4
ENST00000632616.1
CDS-3UTR CAA 90 bp GCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCAGGCACCAGACACCCCCAACACTGGTTTGTaGAGTCATGGCCAACAGGGT +
Preference number: 5 (lower is better)
Translates to: AGSGRNPPQGSLFQAPDTPNTGL*SHGQQG
Trigger: ACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGG...GGTGTCTGGTGCCTGGAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CAA 90 bp GCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGAGAAACCTAATAGGATaGGGTGCGGTGGCTCACACC +
Preference number: 5 (lower is better)
Translates to: AGEADGSQHWFVESWPTGRNLIG*GAVAHT
Trigger: GGTGTGAGCCACCGCACCCAATCCTATTAGGTTTCT...CCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS CCA 90 bp CTTGGTACCCCTAGAGTGAGCTCTCCACCGCTGGCAGCTTTATCGTaGCTAACTCCTGTCTTCAGAGTCTCCATCTTGGCTGCTCCTGCC +
Preference number: 5 (lower is better)
Translates to: LGTPRVSSPPLAALS*LTPVFRVSILAAPA
Trigger: GGCAGGAGCAGCCAAGATGGAGACTCTGAAGACAGGAGTTAGCCACGATAAAGCTGCCAGCGGTGGAGAGCTCACTCTAGGGGTACCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570954.1
ENST00000631957.1
ENST00000632056.1
CDS-3UTR CAA 90 bp TCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTCCTTCCAGACCTCTCTTaGCTCACTGCAGATCTTACA +
Preference number: 5 (lower is better)
Translates to: SGRSRAGSGRNPPQGSLFLPDLS*LTADLT
Trigger: TGTAAGATCTGCAGTGAGCAAAGAGAGGTCTGGAAG...GAACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000331302.12
ENST00000608278.2
ENST00000618002.4
ENST00000632616.1
CDS-3UTR CAA 90 bp GGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTGCTCCCAACACTGGTTaGTTGAGTCATGGCCAACAG +
Preference number: 5 (lower is better)
Translates to: GEADGSQHWFVESWPTGCAPNTG*LSHGQQ
Trigger: CTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGC...ACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000618002.4
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
CDS-3UTR CAA 90 bp GACCGGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTGAGTTTCTTTACTGTTaGCCAGCAGCAAGGACAAAA +
Preference number: 5 (lower is better)
Translates to: DRSGRSRAGSGRNPPQGSEFLYC*PAARTK
Trigger: TTTTGTCCTTGCTGCTGGCAAACAGTAAAGAAACTC...ACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACCGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CAA 90 bp GCTTGGAGAGAAGGCCCTTCCAGACCCAGGAACCCGGGGTTTGGGGCAGGAGGCGAGTTTCTTTACTGTTaGCCAGCAGCAAGGACAAAA +
Preference number: 5 (lower is better)
Translates to: AWREGPSRPRNPGFGAGGEFLYC*PAARTK
Trigger: TTTTGTCCTTGCTGCTGGCAAACAGTAAAGAAACTC...GCCTCCTGCCCCAAACCCCGGGTTCCTGGGTCTGGAAGGGCCTTCTCTCCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS TCA 90 bp GGGTCTGGAAAGTCCCAGGCAGGCAGAATCTTTGCAGAGGAAACCTaGTTTCGGCTCCCACCTGGGAACTGCTTGTTGAAGGAGCCCAAG +
Preference number: 5 (lower is better)
Translates to: GSGKSQAGRIFAEET*FRLPPGNCLLKEPK
Trigger: CTTGGGCTCCTTCAACAAGCAGTTCCCAGGTGGGAGCCGAAATCAGGTTTCCTCTGCAAAGATTCTGCCTGCCTGGGACTTTCCAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000573448.1
ENST00000632511.1
ENST00000634137.1
CDS CCA 90 bp TCTCTGCCCAGAAAATGCCCAAGTGCTCCCAGGCTGCCGGGCACCTaGCTTGGGACGGGCAGTATCGAGCATTCATGCTATTTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: SLPRKCPSAPRLPGT*LGTGSIEHSCYLSF
Trigger: AAAAGACAAATAGCATGAATGCTCGATACTGCCCGTCCCAAGCCAGGTGCCCGGCAGCCTGGGAGCACTTGGGCATTTTCTGGGCAGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000573448.1
ENST00000632511.1
ENST00000634137.1
CDS CCA 90 bp CCCAGAACTTCGCAGTTTCTGGTGAACGTGTCTGACCTCTCCTACTaGACCAAACACTCCCTCAGAGCAGGATGCCTCCTGCCCATATGG +
Preference number: 5 (lower is better)
Translates to: PRTSQFLVNVSDLSY*TKHSLRAGCLLPIW
Trigger: CCATATGGGCAGGAGGCATCCTGCTCTGAGGGAGTGTTTGGTCCAGTAGGAGAGGTCAGACACGTTCACCAGAAACTGCGAAGTTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575634.5
ENST00000633046.1
ENST00000633168.1
CDS-3UTR CAA 90 bp AGCAAAAACCAGGCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTTCCCTCCCACCACCGTaGTCGGGGGTGACCCGAGGT +
Preference number: 5 (lower is better)
Translates to: SKNQAGHEGIQRNLIGLGSLPPP*SGVTRG
Trigger: ACCTCGGGTCACCCCCGACAACGGTGGTGGGAGGGA...ACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGCCTGGTTTTTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CAA 90 bp AAACACAGGATCCTGGAAACAGTCTCCAACTCAAAAGGTGAGCTGAGGGGAAGTCAGCCCGTCTGCAGCTaGGCTCGAAGGGCAAGCTGC +
Preference number: 5 (lower is better)
Translates to: KHRILETVSNSKGELRGSQPVCS*ARRASC
Trigger: GCAGCTTGCCCTTCGAGCCAAGCTGCAGACGGGCTG...ACTTCCCCTCAGCTCACCTTTTGAGTTGGAGACTGTTTCCAGGATCCTGTGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR CAA 90 bp TTTACTGTTTGCCAGCAGCAAGGACAAAAAGTGAATGGTGGGGGCCCAGGAGCTTCATCACCAGGTAGATaGGGGGTGTGGGAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: FTVCQQQGQKVNGGGPGASSPGR*GVWEGR
Trigger: CCTCCCCTCCCACACCCCCAATCTACCTGGTGATGA...AGCTCCTGGGCCCCCACCATTCACTTTTTGTCCTTGCTGCTGGCAAACAGTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CAA 90 bp GGTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTGAGTTTCTTTACTGTTaGCCAGCAGCAAGGACAAAA +
Preference number: 5 (lower is better)
Translates to: GQGGAGQGLAGILHREVCEFLYC*PAARTK
Trigger: TTTTGTCCTTGCTGCTGGCAAACAGTAAAGAAACTC...ACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS TCA 90 bp TGGGAAATCACGTGTGGGCCCCGTGGATCTCAAACCGAGACGGGGTaGTCTCAGTCCAGTTCCTCGTTTGGAACTCTAGATCTCTATGGG +
Preference number: 5 (lower is better)
Translates to: WEITCGPRGSQTETG*SQSSSSFGTLDLYG
Trigger: CCCATAGAGATCTAGAGTTCCAAACGAGGAACTGGACTGAGATCACCCCGTCTCGGTTTGAGATCCACGGGGCCCACACGTGATTTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572965.1
ENST00000631722.1
CDS GCA 90 bp CACATTTGGTGCAGACTTTCTCCACCTCGCCTCCGTTTCTTCACCTaGAACGAGGAGACCGTGACCTCCCAGGTGGTTTTGCTAATCAGC +
Preference number: 5 (lower is better)
Translates to: HIWCRLSPPRLRFFT*NEETVTSQVVLLIS
Trigger: GCTGATTAGCAAAACCACCTGGGAGGTCACGGTCTCCTCGTTGCAGGTGAAGAAACGGAGGCGAGGTGGAGAAAGTCTGCACCAAATGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570954.1
ENST00000631957.1
ENST00000632056.1
CDS-3UTR CAA 90 bp TTTACTGTTTGCCAGCAGCAAGGACAAAAAGTGAATGGTGGGGGCCCAGGAGCTCTGCAGGCCTCATGCTaGCTGTCTCCAAAGTGCACG +
Preference number: 5 (lower is better)
Translates to: FTVCQQQGQKVNGGGPGALQASC*LSPKCT
Trigger: CGTGCACTTTGGAGACAGCAAGCATGAGGCCTGCAG...AGCTCCTGGGCCCCCACCATTCACTTTTTGTCCTTGCTGCTGGCAAACAGTAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CAA 90 bp AAAGGCACTGAGCTGGGGAGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGCCTCGATCCCACATTaGGTGCAGACTTTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: KGTELGRQTAPNTGLLSHASIPH*VQTFFL
Trigger: CAGGAAGAAAGTCTGCACCAAATGTGGGATCGAGGC...ATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCTCCCCAGCTCAGTGCCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331302.12
ENST00000618002.4
ENST00000632616.1
CDS-3UTR CAA 90 bp TCAAAAGGTGAGCTGAGGGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTGCCTCGATCCCACATTaGGTGCAGACTTTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: SKGELRGSSRKAALRNYSASIPH*VQTFFL
Trigger: CAGGAAGAAAGTCTGCACCAAATGTGGGATCGAGGC...AGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCCCTCAGCTCACCTTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR CAA 90 bp GTCAGGGAGGAGCCGGGCAGGGTCTGGCAGGAATCCTCCACAGGGAAGTCTGTTGAGTTTCTTTACTGTTaGCCAGCAGCAAGGACAAAA +
Preference number: 5 (lower is better)
Translates to: VREEPGRVWQESSTGKSVEFLYC*PAARTK
Trigger: TTTTGTCCTTGCTGCTGGCAAACAGTAAAGAAACTC...AACAGACTTCCCTGTGGAGGATTCCTGCCAGACCCTGCCCGGCTCCTCCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS CCA 90 bp GGGAGTCACATTGCAAACGTGACCAGAATAATACGTAGGTACCTGTaGCCCCTGAGCACTCTCTGCCCAGAAAATGCCCAAGTGCTCCCA +
Preference number: 5 (lower is better)
Translates to: GSHIANVTRIIRRYL*PLSTLCPENAQVLP
Trigger: TGGGAGCACTTGGGCATTTTCTGGGCAGAGAGTGCTCAGGGGCCACAGGTACCTACGTATTATTCTGGTCACGTTTGCAATGTGACTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000573448.1
ENST00000632511.1
ENST00000634137.1
CDS-3UTR CAA 90 bp CTTTACTGTTTGCCAGCAGCAAGGACAAAAAGTGAATGGTGGGGGCCCAGGAGCTTCTTCCTGCAGTCTTaGCAGAACACCGACGAGCTG +
Preference number: 5 (lower is better)
Translates to: LYCLPAARTKSEWWGPRSFFLQS*QNTDEL
Trigger: CAGCTCGTCGGTGTTCTGCAAAGACTGCAGGAAGAA...GCTCCTGGGCCCCCACCATTCACTTTTTGTCCTTGCTGCTGGCAAACAGTAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000331302.12
ENST00000618002.4
ENST00000632616.1
CDS-3UTR CAA 90 bp GGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTGCGGTGGCTCACACCTTCTTCCTGCAGTCTTaGCAGAACACCGACGAGCTG +
Preference number: 5 (lower is better)
Translates to: GHEGIQRNLIGLGAVAHTFFLQS*QNTDEL
Trigger: CAGCTCGTCGGTGTTCTGCAAAGACTGCAGGAAGAA...GGTGTGAGCCACCGCACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331302.12
ENST00000618002.4
ENST00000632616.1
CDS-3UTR CAA 90 bp GGGGATGCACCTGAACGCTGCTCTTCAGCAAGTGAGTTCATAGCATCCACCAGAGCCTCGATCCCACATTaGGTGCAGACTTTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: GDAPERCSSASEFIASTRASIPH*VQTFFL
Trigger: CAGGAAGAAAGTCTGCACCAAATGTGGGATCGAGGC...TCTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000331302.12
ENST00000618002.4
ENST00000632616.1
CDS-3UTR CAA 90 bp AGTCTTGCCATTAATATAGCAACGGAGATAGCCCCACCGGGCGGCCCCTCTGACCTTCCAGACCTCTCTTaGCTCACTGCAGATCTTACA +
Preference number: 5 (lower is better)
Translates to: SLAINIATEIAPPGGPSDLPDLS*LTADLT
Trigger: TGTAAGATCTGCAGTGAGCAAAGAGAGGTCTGGAAG...GTCAGAGGGGCCGCCCGGTGGGGCTATCTCCGTTGCTATATTAATGGCAAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000331302.12
ENST00000618002.4
ENST00000632616.1
CDS-3UTR CAA 90 bp GGGGATGCACCTGAACGCTGCTCTTCAGCAAGTGAGTTCATAGCATCCACCAGACCCAACACTGGTTTGTaGAGTCATGGCCAACAGGGT +
Preference number: 5 (lower is better)
Translates to: GDAPERCSSASEFIASTRPNTGL*SHGQQG
Trigger: ACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGG...TCTGGTGGATGCTATGAACTCACTTGCTGAAGAGCAGCGTTCAGGTGCATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CAA 90 bp CTTTACTGTTTGCCAGCAGCAAGGACAAAAAGTGAATGGTGGGGGCCCAGGAGCGCTCCCAACACTGGTTaGTTGAGTCATGGCCAACAG +
Preference number: 5 (lower is better)
Translates to: LYCLPAARTKSEWWGPRSAPNTG*LSHGQQ
Trigger: CTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGC...GCTCCTGGGCCCCCACCATTCACTTTTTGTCCTTGCTGCTGGCAAACAGTAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CAA 90 bp AGGCTGAGCAAAAACCAGGCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGATCATCACCAGGTAGATaGGGGGTGTGGGAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: RLSKNQAGHEGIQRNLIGSSPGR*GVWEGR
Trigger: CCTCCCCTCCCACACCCCCAATCTACCTGGTGATGA...TCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGCCTGGTTTTTGCTCAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CAA 90 bp GGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTGCGGTGGCTCACACCAGAAACCTAATAGGATaGGGTGCGGTGGCTCACACC +
Preference number: 5 (lower is better)
Translates to: GHEGIQRNLIGLGAVAHTRNLIG*GAVAHT
Trigger: GGTGTGAGCCACCGCACCCAATCCTATTAGGTTTCT...GGTGTGAGCCACCGCACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS GCA 90 bp ACTCAAAGCTGTCAGCTGCAGGCCTCATGCTTGCTGTCTCCAAAGTaGACGTACAAGTGTCCACTACACAAATTCTGCTGGAGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: TQSCQLQASCLLSPK*TYKCPLHKFCWRQL
Trigger: CAGCTGCCTCCAGCAGAATTTGTGTAGTGGACACTTGTACGTGCACTTTGGAGACAGCAAGCATGAGGCCTGCAGCTGACAGCTTTGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000573588.5
ENST00000574011.1
ENST00000575130.5
ENST00000609977.5
ENST00000632000.1
ENST00000632071.1
ENST00000632576.1
ENST00000632616.1
ENST00000633160.1
ENST00000633184.1
ENST00000633332.1
ENST00000633904.1
ENST00000634090.1
CDS CCA 90 bp GGCAGGCAGAATCTTTGCAGAGGAAACCTGATTTCGGCTCCCACCTaGGAACTGCTTGTTGAAGGAGCCCAAGAGAAACCTCTCCATGAA +
Preference number: 5 (lower is better)
Translates to: GRQNLCRGNLISAPT*ELLVEGAQEKPLHE
Trigger: TTCATGGAGAGGTTTCTCTTGGGCTCCTTCAACAAGCAGTTCCCAGGTGGGAGCCGAAATCAGGTTTCCTCTGCAAAGATTCTGCCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000573448.1
ENST00000632511.1
ENST00000634137.1
CDS-3UTR CAA 90 bp AGCAAAAACCAGGCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTTCATCACCAGGTAGATaGGGGGTGTGGGAGGGGAGG +
Preference number: 5 (lower is better)
Translates to: SKNQAGHEGIQRNLIGLGSSPGR*GVWEGR
Trigger: CCTCCCCTCCCACACCCCCAATCTACCTGGTGATGA...ACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGCCTGGTTTTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS TCA 90 bp GTTTTTACCTCTTCCCAGAACTTCGCAGTTTCTGGTGAACGTGTCTaGCCTCTCCTACTGGACCAAACACTCCCTCAGAGCAGGATGCCT +
Preference number: 5 (lower is better)
Translates to: VFTSSQNFAVSGERV*PLLLDQTLPQSRMP
Trigger: AGGCATCCTGCTCTGAGGGAGTGTTTGGTCCAGTAGGAGAGGTCAGACACGTTCACCAGAAACTGCGAAGTTCTGGGAAGAGGTAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575634.5
ENST00000633046.1
ENST00000633168.1
CDS GCA 90 bp ACCTCTCCTACTGGACCAAACACTCCCTCAGAGCAGGATGCCTCCTaGCCATATGGTACTGAAAACTGTGGCACTGGAATAGAACTGAGA +
Preference number: 5 (lower is better)
Translates to: TSPTGPNTPSEQDAS*PYGTENCGTGIELR
Trigger: TCTCAGTTCTATTCCAGTGCCACAGTTTTCAGTACCATATGGGCAGGAGGCATCCTGCTCTGAGGGAGTGTTTGGTCCAGTAGGAGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575634.5
ENST00000633046.1
ENST00000633168.1
CDS-3UTR CAA 90 bp AGGCAGACGGCTCCCAACACTGGTTTGTTGAGTCATGGCCAACAGGGTGTCTGGGAGTTTCTTTACTGTTaGCCAGCAGCAAGGACAAAA +
Preference number: 5 (lower is better)
Translates to: RQTAPNTGLLSHGQQGVWEFLYC*PAARTK
Trigger: TTTTGTCCTTGCTGCTGGCAAACAGTAAAGAAACTC...CCAGACACCCTGTTGGCCATGACTCAACAAACCAGTGTTGGGAGCCGTCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS GCA 90 bp TTGCTGTCTCCAAAGTGCACGTACAAGTGTCCACTACACAAATTCTaGTGGAGGCAGCTGTGTCTTGGTAGCCTAATCTGCGGATCTCCA +
Preference number: 5 (lower is better)
Translates to: LLSPKCTYKCPLHKF*WRQLCLGSLICGSP
Trigger: TGGAGATCCGCAGATTAGGCTACCAAGACACAGCTGCCTCCAGCAGAATTTGTGTAGTGGACACTTGTACGTGCACTTTGGAGACAGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000573588.5
ENST00000574011.1
ENST00000575130.5
ENST00000609977.5
ENST00000632000.1
ENST00000632071.1
ENST00000632576.1
ENST00000632616.1
ENST00000633160.1
ENST00000633184.1
ENST00000633332.1
ENST00000633904.1
ENST00000634090.1
CDS GCA 90 bp ATAGTCAGGTTCACAGCCACTCAAAGCTGTCAGCTGCAGGCCTCATaGTTGCTGTCTCCAAAGTGCACGTACAAGTGTCCACTACACAAA +
Preference number: 5 (lower is better)
Translates to: IVRFTATQSCQLQAS*LLSPKCTYKCPLHK
Trigger: TTTGTGTAGTGGACACTTGTACGTGCACTTTGGAGACAGCAAGCATGAGGCCTGCAGCTGACAGCTTTGAGTGGCTGTGAACCTGACTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000573588.5
ENST00000574011.1
ENST00000575130.5
ENST00000609977.5
ENST00000632000.1
ENST00000632071.1
ENST00000632576.1
ENST00000632616.1
ENST00000633160.1
ENST00000633184.1
ENST00000633332.1
ENST00000633904.1
ENST00000634090.1
CDS-3UTR CAA 90 bp AAACACAGGATCCTGGAAACAGTCTCCAACTCAAAAGGTGAGCTGAGGGGAAGTGCCTCGATCCCACATTaGGTGCAGACTTTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: KHRILETVSNSKGELRGSASIPH*VQTFFL
Trigger: CAGGAAGAAAGTCTGCACCAAATGTGGGATCGAGGC...ACTTCCCCTCAGCTCACCTTTTGAGTTGGAGACTGTTTCCAGGATCCTGTGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS-3UTR CAA 90 bp AGCAAAAACCAGGCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTACCTTCCTGCAGTCTTaGCAGAACACCGACGAGCTG +
Preference number: 5 (lower is better)
Translates to: SKNQAGHEGIQRNLIGLGTFLQS*QNTDEL
Trigger: CAGCTCGTCGGTGTTCTGCAAAGACTGCAGGAAGGT...ACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGCCTGGTTTTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000323434.12
ENST00000632000.1
CDS TCA 90 bp ACCAAACACTCCCTCAGAGCAGGATGCCTCCTGCCCATATGGTACTaGAAACTGTGGCACTGGAATAGAACTGAGAGCCCAGAAATAAAC +
Preference number: 5 (lower is better)
Translates to: TKHSLRAGCLLPIWY*KLWHWNRTESPEIN
Trigger: GTTTATTTCTGGGCTCTCAGTTCTATTCCAGTGCCACAGTTTTCAGTACCATATGGGCAGGAGGCATCCTGCTCTGAGGGAGTGTTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575634.5
ENST00000633046.1
ENST00000633168.1
CDS CCA 90 bp CTGTCTCCAAAGTGCACGTACAAGTGTCCACTACACAAATTCTGCTaGAGGCAGCTGTGTCTTGGTAGCCTAATCTGCGGATCTCCAATT +
Preference number: 5 (lower is better)
Translates to: LSPKCTYKCPLHKFC*RQLCLGSLICGSPI
Trigger: AATTGGAGATCCGCAGATTAGGCTACCAAGACACAGCTGCCTCCAGCAGAATTTGTGTAGTGGACACTTGTACGTGCACTTTGGAGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000573588.5
ENST00000574011.1
ENST00000575130.5
ENST00000609977.5
ENST00000632000.1
ENST00000632071.1
ENST00000632576.1
ENST00000632616.1
ENST00000633160.1
ENST00000633184.1
ENST00000633332.1
ENST00000633904.1
ENST00000634090.1
CDS-3UTR CAA 90 bp AGCAAAAACCAGGCAGGCCATGAGGGGATTCAAAGAAACCTAATAGGATTGGGTGCCTCGATCCCACATTaGGTGCAGACTTTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: SKNQAGHEGIQRNLIGLGASIPH*VQTFFL
Trigger: CAGGAAGAAAGTCTGCACCAAATGTGGGATCGAGGC...ACCCAATCCTATTAGGTTTCTTTGAATCCCCTCATGGCCTGCCTGGTTTTTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000331302.12
ENST00000618002.4
ENST00000632616.1
CDS-3UTR CAA 90 bp GGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAAGTATTTTCATGCCAAGCCAGAAACCTAATAGGATaGGGTGCGGTGGCTCACACC +
Preference number: 5 (lower is better)
Translates to: GFPEAFAHTLNEVFSCQARNLIG*GAVAHT
Trigger: GGTGTGAGCCACCGCACCCAATCCTATTAGGTTTCT...GGCTTGGCATGAAAATACTTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000618002.4
ENST00000632000.1
ENST00000632616.1
CDS-3UTR CAA 90 bp TCTTCAGGGAAGGGTTTTCCAGAAGCATTTGCCCATACTCTGAATGAAGTATTTACCTTCCTGCAGTCTTaGCAGAACACCGACGAGCTG +
Preference number: 5 (lower is better)
Translates to: SSGKGFPEAFAHTLNEVFTFLQS*QNTDEL
Trigger: CAGCTCGTCGGTGTTCTGCAAAGACTGCAGGAAGGT...AAATACTTCATTCAGAGTATGGGCAAATGCTTCTGGAAAACCCTTCCCTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000323434.12
ENST00000632000.1
CDS CCA 72 bp GAGCCTGTCCCCGTCTCACCACTGGCCAGGCTGCTCTaGCACCCAGAGAGGTGGCCCGGCGGGTGGGTGAAC +
Preference number: 6 (lower is better)
Translates to: EPVPVSPLARLL*HPERWPGGWVN
Trigger: GTTCACCCACCCGCCGGGCCACCTCTCTGGGTGCCAGAGCAGCCTGGCCAGTGGTGAGACGGGGACAGGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000570893.5
ENST00000572075.5
ENST00000572965.1
ENST00000576001.5
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000631558.1
ENST00000631722.1
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
ENST00000633922.1
ENST00000634166.1
CDS CCA 72 bp CTGGCGGGTCAGCAGAGCCTGTCCCCGTCTCACCACTaGCCAGGCTGCTCTGGCACCCAGAGAGGTGGCCCG +
Preference number: 6 (lower is better)
Translates to: LAGQQSLSPSHH*PGCSGTQRGGP
Trigger: CGGGCCACCTCTCTGGGTGCCAGAGCAGCCTGGCCAGTGGTGAGACGGGGACAGGCTCTGCTGACCCGCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000570893.5
ENST00000572075.5
ENST00000572965.1
ENST00000576001.5
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000631558.1
ENST00000631722.1
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
ENST00000633922.1
ENST00000634166.1
CDS GCA 72 bp GCCCCCGGCGTGGAGGGAGAACGGCTGCACATTTGCTaGTGCAGAGTGTGCCATCCCACTGGGCGCTGTGCC +
Preference number: 6 (lower is better)
Translates to: APGVEGERLHIC*CRVCHPTGRCA
Trigger: GGCACAGCGCCCAGTGGGATGGCACACTCTGCAGCAGCAAATGTGCAGCCGTTCTCCCTCCACGCCGGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000574011.1
ENST00000633160.1
ENST00000634090.1
CDS CCA 72 bp TGGGGCAAACCCACTGATCATTCCCGCTGCCGAAGATaGTGTCGGCCATGGCTCGGAGCACCCGGCTGGGGG +
Preference number: 6 (lower is better)
Translates to: WGKPTDHSRCRR*CRPWLGAPGWG
Trigger: CCCCCAGCCGGGTGCTCCGAGCCATGGCCGACACCATCTTCGGCAGCGGGAATGATCAGTGGGTTTGCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 42 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000570638.5
ENST00000573448.1
ENST00000573588.5
ENST00000573780.5
ENST00000574722.5
ENST00000575130.5
ENST00000575634.5
ENST00000575736.5
ENST00000576420.5
ENST00000577079.5
ENST00000608278.2
ENST00000608519.5
ENST00000609977.5
ENST00000618002.4
ENST00000631901.1
ENST00000632000.1
ENST00000632071.1
ENST00000632083.1
ENST00000632176.1
ENST00000632337.1
ENST00000632511.1
ENST00000632545.1
ENST00000632576.1
ENST00000632610.1
ENST00000632616.1
ENST00000632678.1
ENST00000632735.1
ENST00000633046.1
ENST00000633168.1
ENST00000633184.1
ENST00000633301.1
ENST00000633332.1
ENST00000633726.1
ENST00000633744.1
ENST00000633904.1
ENST00000634024.1
ENST00000634042.1
ENST00000634137.1
ENST00000634169.1
CDS GCA 72 bp CCCGATTCTCTGCTGCTCCAGGACGTCGAGCCGCTCTaGCCTCTGGATGACCTGCAGGATGGCCTCCACCTC +
Preference number: 6 (lower is better)
Translates to: PDSLLLQDVEPL*PLDDLQDGLHL
Trigger: GAGGTGGAGGCCATCCTGCAGGTCATCCAGAGGGCAGAGCGGCTCGACGTCCTGGAGCAGCAGAGAATCGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 41 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000570638.5
ENST00000573588.5
ENST00000573780.5
ENST00000574722.5
ENST00000574953.5
ENST00000575130.5
ENST00000575634.5
ENST00000575736.5
ENST00000576420.5
ENST00000577079.5
ENST00000608278.2
ENST00000608519.5
ENST00000609977.5
ENST00000618002.4
ENST00000631901.1
ENST00000632000.1
ENST00000632071.1
ENST00000632083.1
ENST00000632176.1
ENST00000632337.1
ENST00000632545.1
ENST00000632576.1
ENST00000632610.1
ENST00000632616.1
ENST00000632671.1
ENST00000632678.1
ENST00000632735.1
ENST00000633046.1
ENST00000633168.1
ENST00000633184.1
ENST00000633301.1
ENST00000633332.1
ENST00000633726.1
ENST00000633744.1
ENST00000633904.1
ENST00000634024.1
ENST00000634042.1
ENST00000634169.1
CDS GCA 72 bp GATGCGGCTGGTCTCAGAGCTTCTGGGCTCTCGCTCTaGCGGTTCCGTGGGCAAAGGTCGGAAGTGGGGGTC +
Preference number: 6 (lower is better)
Translates to: DAAGLRASGLSL*RFRGQRSEVGV
Trigger: GACCCCCACTTCCGACCTTTGCCCACGGAACCGGCAGAGCGAGAGCCCAGAAGCTCTGAGACCAGCCGCATC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 17 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000570893.5
ENST00000570954.1
ENST00000576001.5
ENST00000576420.5
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000631558.1
ENST00000631957.1
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
ENST00000634166.1
ENST00000634169.1
CDS CCA 72 bp GGGCCCACGTGTAGATGCGGCTGGTCTCAGAGCTTCTaGGCTCTCGCTCTGCCGGTTCCGTGGGCAAAGGTC +
Preference number: 6 (lower is better)
Translates to: GPTCRCGWSQSF*ALALPVPWAKV
Trigger: GACCTTTGCCCACGGAACCGGCAGAGCGAGAGCCCAGAAGCTCTGAGACCAGCCGCATCTACACGTGGGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000570893.5
ENST00000570954.1
ENST00000576001.5
ENST00000576420.5
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000631558.1
ENST00000631957.1
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
ENST00000634166.1
ENST00000634169.1
CDS GCA 72 bp GCCGGTCATTGGGGCAAACCCACTGATCATTCCCGCTaGCGAAGATGGTGTCGGCCATGGCTCGGAGCACCC +
Preference number: 6 (lower is better)
Translates to: AGHWGKPTDHSR*RRWCRPWLGAP
Trigger: GGGTGCTCCGAGCCATGGCCGACACCATCTTCGGCAGCGGGAATGATCAGTGGGTTTGCCCCAATGACCGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 42 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000570638.5
ENST00000573448.1
ENST00000573588.5
ENST00000573780.5
ENST00000574722.5
ENST00000575130.5
ENST00000575634.5
ENST00000575736.5
ENST00000576420.5
ENST00000577079.5
ENST00000608278.2
ENST00000608519.5
ENST00000609977.5
ENST00000618002.4
ENST00000631901.1
ENST00000632000.1
ENST00000632071.1
ENST00000632083.1
ENST00000632176.1
ENST00000632337.1
ENST00000632511.1
ENST00000632545.1
ENST00000632576.1
ENST00000632610.1
ENST00000632616.1
ENST00000632678.1
ENST00000632735.1
ENST00000633046.1
ENST00000633168.1
ENST00000633184.1
ENST00000633301.1
ENST00000633332.1
ENST00000633726.1
ENST00000633744.1
ENST00000633904.1
ENST00000634024.1
ENST00000634042.1
ENST00000634137.1
ENST00000634169.1
CDS GCA 72 bp ACTCTCTGCCCAGAAAATGCCCAAGTGCTCCCAGGCTaGCGGGCACCTGGCTTGGGACGGGCAGTATCGAGC +
Preference number: 6 (lower is better)
Translates to: TLCPENAQVLPG*RAPGLGRAVSS
Trigger: GCTCGATACTGCCCGTCCCAAGCCAGGTGCCCGGCAGCCTGGGAGCACTTGGGCATTTTCTGGGCAGAGAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000573448.1
ENST00000632511.1
ENST00000634137.1
CDS CCA 72 bp TCTCAGAGCTTCTGGGCTCTCGCTCTGCCGGTTCCGTaGGCAAAGGTCGGAAGTGGGGGTCATCAGCTCGGC +
Preference number: 6 (lower is better)
Translates to: SQSFWALALPVP*AKVGSGGHQLG
Trigger: GCCGAGCTGATGACCCCCACTTCCGACCTTTGCCCACGGAACCGGCAGAGCGAGAGCCCAGAAGCTCTGAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 19 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000570893.5
ENST00000570954.1
ENST00000576001.5
ENST00000576420.5
ENST00000577079.5
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000631558.1
ENST00000631957.1
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
ENST00000633301.1
ENST00000634166.1
ENST00000634169.1
CDS GCA 72 bp AGGCCCCCGACCTCTTCCAGACCTTCCTGCAGTCTTTaGAGAACACCGACGAGCTGCCCAGGAAGCCCAGCA +
Preference number: 6 (lower is better)
Translates to: RPPTSSRPSCSL*RTPTSCPGSPA
Trigger: TGCTGGGCTTCCTGGGCAGCTCGTCGGTGTTCTGCAAAGACTGCAGGAAGGTCTGGAAGAGGTCGGGGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000323434.12
ENST00000536489.6
ENST00000574722.5
ENST00000608519.5
ENST00000632000.1
ENST00000632176.1
ENST00000632545.1
CDS CCA 72 bp TCCCAAGTGCTAAATCTGAGCTGGCGCCCAGAGGGCTaGGTTGAAAAGGGGCTGGAGGCTGCCTCCAGCCTC +
Preference number: 6 (lower is better)
Translates to: SQVLNLSWRPEG*VEKGLEAASSL
Trigger: GAGGCTGGAGGCAGCCTCCAGCCCCTTTTCAACCCAGCCCTCTGGGCGCCAGCTCAGATTTAGCACTTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574011.1
ENST00000633160.1
ENST00000634090.1
CDS CCA 72 bp GGGCAGGTTAGTGACTGCCCTGAGGTCACAGCTCGCTaGCACCAACTTGGGCAGAGCTGGGAACTCCGAAGC +
Preference number: 6 (lower is better)
Translates to: GQVSDCPEVTAR*HQLGQSWELRS
Trigger: GCTTCGGAGTTCCCAGCTCTGCCCAAGTTGGTGCCAGCGAGCTGTGACCTCAGGGCAGTCACTAACCTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572866.1
ENST00000632722.1
ENST00000633196.1
CDS CCA 72 bp GGGGGTTGGGAGTCACATCTGCCAGGTGCCCGCCACTaGCTGACCAACTGGAATCATCACAAGCCCCAGAGG +
Preference number: 6 (lower is better)
Translates to: GGWESHLPGARH*LTNWNHHKPQR
Trigger: CCTCTGGGGCTTGTGATGATTCCAGTTGGTCAGCCAGTGGCGGGCACCTGGCAGATGTGACTCCCAACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000631901.1
CDS CAA 90 bp AGCCACAGGGGCCGCTTCTGGCCAGGGGAGGCCTCGATCCCACATTaGGTGCAGACTTTCTCCACCTCGCCTCCGTTTCTTCACCTGCAA +
Preference number: 6 (lower is better)
Translates to: SHRGRFWPGEASIPH*VQTFSTSPPFLHLQ
Trigger: TTGCAGGTGAAGAAACGGAGGCGAGGTGGAGAAAGTCTGCACCAAATGTGGGATCGAGGCCTCCCCTGGCCAGAAGCGGCCCCTGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000570954.1
ENST00000631957.1
ENST00000632056.1
CDS TCA 72 bp CGAAGGGCAAGCTGCCGGTCATTGGGGCAAACCCACTaGTCATTCCCGCTGCCGAAGATGGTGTCGGCCATG +
Preference number: 6 (lower is better)
Translates to: RRASCRSLGQTH*SFPLPKMVSAM
Trigger: CATGGCCGACACCATCTTCGGCAGCGGGAATGATCAGTGGGTTTGCCCCAATGACCGGCAGCTTGCCCTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 42 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000570638.5
ENST00000573448.1
ENST00000573588.5
ENST00000573780.5
ENST00000574722.5
ENST00000575130.5
ENST00000575634.5
ENST00000575736.5
ENST00000576420.5
ENST00000577079.5
ENST00000608278.2
ENST00000608519.5
ENST00000609977.5
ENST00000618002.4
ENST00000631901.1
ENST00000632000.1
ENST00000632071.1
ENST00000632083.1
ENST00000632176.1
ENST00000632337.1
ENST00000632511.1
ENST00000632545.1
ENST00000632576.1
ENST00000632610.1
ENST00000632616.1
ENST00000632678.1
ENST00000632735.1
ENST00000633046.1
ENST00000633168.1
ENST00000633184.1
ENST00000633301.1
ENST00000633332.1
ENST00000633726.1
ENST00000633744.1
ENST00000633904.1
ENST00000634024.1
ENST00000634042.1
ENST00000634137.1
ENST00000634169.1
CDS TCA 72 bp GTGGGGAGTCACATCTGCCAGGTGCCCGCCACTGGCTaGCCAACTGGAATCATCACAAGCCCCAGAGGACGA +
Preference number: 6 (lower is better)
Translates to: VGSHICQVPATG*PTGIITSPRGR
Trigger: TCGTCCTCTGGGGCTTGTGATGATTCCAGTTGGTCAGCCAGTGGCGGGCACCTGGCAGATGTGACTCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575736.5
ENST00000632678.1
CDS GCA 72 bp AGGCCCCCGACCTCTTCCAGACCTCTCTTTGCTCACTaGAGATCTTACACAGCCACAGGGGCCGCTTCTGGC +
Preference number: 6 (lower is better)
Translates to: RPPTSSRPLFAH*RSYTATGAASG
Trigger: GCCAGAAGCGGCCCCTGTGGCTGTGTAAGATCTGCAGTGAGCAAAGAGAGGTCTGGAAGAGGTCGGGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000331302.12
ENST00000570954.1
ENST00000576001.5
ENST00000576420.5
ENST00000577079.5
ENST00000608278.2
ENST00000618002.4
ENST00000631558.1
ENST00000631957.1
ENST00000632616.1
ENST00000633301.1
ENST00000634169.1
CDS GCA 72 bp CACTGGAAACCACTCTTCCTCGGGCCCACGTGTAGATaGGGCTGGTCTCAGAGCTTCTGGGCTCTCGCTCTG +
Preference number: 6 (lower is better)
Translates to: HWKPLFLGPTCR*GWSQSFWALAL
Trigger: CAGAGCGAGAGCCCAGAAGCTCTGAGACCAGCCGCATCTACACGTGGGCCCGAGGAAGAGTGGTTTCCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000570893.5
ENST00000570954.1
ENST00000576001.5
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000631558.1
ENST00000631957.1
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
ENST00000634166.1
CDS CCA 72 bp AAACCACTCTTCCTCGGGCCCACGTGTAGATGCGGCTaGTCTCAGAGCTTCTGGGCTCTCGCTCTGCCGGTT +
Preference number: 6 (lower is better)
Translates to: KPLFLGPTCRCG*SQSFWALALPV
Trigger: AACCGGCAGAGCGAGAGCCCAGAAGCTCTGAGACCAGCCGCATCTACACGTGGGCCCGAGGAAGAGTGGTTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000570893.5
ENST00000570954.1
ENST00000576001.5
ENST00000608278.2
ENST00000608519.5
ENST00000618002.4
ENST00000631558.1
ENST00000631957.1
ENST00000632000.1
ENST00000632545.1
ENST00000632616.1
ENST00000634166.1
CDS CCA 72 bp CCAGCTGGAGCCAAACCAAGGCCTGGATTCTCCTCGTaGATGTCTGGTAAGGCCCCACCACGTACCCCAGTC +
Preference number: 6 (lower is better)
Translates to: PAGAKPRPGFSS*MSGKAPPRTPV
Trigger: GACTGGGGTACGTGGTGGGGCCTTACCAGACATCCACGAGGAGAATCCAGGCCTTGGTTTGGCTCCAGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000323434.12
ENST00000632000.1
ENST00000633184.1
CDS CCA 72 bp TGGTGTCGGCCATGGCTCGGAGCACCCGGCTGGGGGTaGGGAGTCACATTAGAAGTCCAGGAACAAGTCAAC +
Preference number: 6 (lower is better)
Translates to: WCRPWLGAPGWG*GVTLEVQEQVN
Trigger: GTTGACTTGTTCCTGGACTTCTAATGTGACTCCCCACCCCCAGCCGGGTGCTCCGAGCCATGGCCGACACCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000574722.5
ENST00000633744.1
CDS CCA 72 bp AGGGCCTGGAGGCTTCGCAGGTGGCGCCTGCAGGGCTaGAAGAGAGGCTTCATCCCAAGTGCTAAATCTGAG +
Preference number: 6 (lower is better)
Translates to: RAWRLRRWRLQG*KRGFIPSAKSE
Trigger: CTCAGATTTAGCACTTGGGATGAAGCCTCTCTTCCAGCCCTGCAGGCGCCACCTGCGAAGCCTCCAGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000574011.1
ENST00000633160.1
ENST00000634090.1
CDS CCA 72 bp ACGCTGCCACCTGTGGGAAATCACGTGTGGGCCCCGTaGATCTCAAACCGAGACGGGGTGATCTCAGTCCAG +
Preference number: 6 (lower is better)
Translates to: TLPPVGNHVWAP*ISNRDGVISVQ
Trigger: CTGGACTGAGATCACCCCGTCTCGGTTTGAGATCCACGGGGCCCACACGTGATTTCCCACAGGTGGCAGCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572965.1
ENST00000631722.1
CDS CCA 72 bp GCCGCTTCTGGCCAGGGGAGGCCTCGATCCCACATTTaGTGCAGACTTTCTCCACCTCGCCTCCGTTTCTTC +
Preference number: 6 (lower is better)
Translates to: AASGQGRPRSHI*CRLSPPRLRFF
Trigger: GAAGAAACGGAGGCGAGGTGGAGAAAGTCTGCACCAAATGTGGGATCGAGGCCTCCCCTGGCCAGAAGCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570954.1
ENST00000631957.1
ENST00000632056.1
CDS CAA 72 bp GGCCGCTTCTGGCCAGGGGAGGCCTCGATCCCACATTaGGTGCAGACTTTCTCCACCTCGCCTCCGTTTCTT +
Preference number: 6 (lower is better)
Translates to: GRFWPGEASIPH*VQTFSTSPPFL
Trigger: AAGAAACGGAGGCGAGGTGGAGAAAGTCTGCACCAAATGTGGGATCGAGGCCTCCCCTGGCCAGAAGCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570954.1
ENST00000631957.1
ENST00000632056.1
CDS TCA 72 bp GTTGGGAGTCACATCTGCCAGGTGCCCGCCACTGGCTaGCCAACTGGAATCATCACAAGCCCCAGAGGACGA +
Preference number: 6 (lower is better)
Translates to: VGSHICQVPATG*PTGIITSPRGR
Trigger: TCGTCCTCTGGGGCTTGTGATGATTCCAGTTGGTCAGCCAGTGGCGGGCACCTGGCAGATGTGACTCCCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000631901.1
CDS GCA 72 bp GCTTCTGGCCAGGGGAGGCCTCGATCCCACATTTGGTaGAGACTTTCTCCACCTCGCCTCCGTTTCTTCACC +
Preference number: 6 (lower is better)
Translates to: ASGQGRPRSHIW*RLSPPRLRFFT
Trigger: GGTGAAGAAACGGAGGCGAGGTGGAGAAAGTCTGCACCAAATGTGGGATCGAGGCCTCCCCTGGCCAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000570954.1
ENST00000631957.1
ENST00000632056.1
CDS CCA 72 bp TCTGCAGCTTGGCTCGAAGGGCAAGCTGCCGGTCATTaGGGCAAACCCACTGATCATTCCCGCTGCCGAAGA +
Preference number: 6 (lower is better)
Translates to: SAAWLEGQAAGH*GKPTDHSRCRR
Trigger: TCTTCGGCAGCGGGAATGATCAGTGGGTTTGCCCCAATGACCGGCAGCTTGCCCTTCGAGCCAAGCTGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 44 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000536489.6
ENST00000570638.5
ENST00000573448.1
ENST00000573588.5
ENST00000573780.5
ENST00000574722.5
ENST00000574953.5
ENST00000575130.5
ENST00000575634.5
ENST00000575736.5
ENST00000576420.5
ENST00000577079.5
ENST00000608278.2
ENST00000608519.5
ENST00000609977.5
ENST00000618002.4
ENST00000631901.1
ENST00000632000.1
ENST00000632071.1
ENST00000632083.1
ENST00000632176.1
ENST00000632337.1
ENST00000632511.1
ENST00000632545.1
ENST00000632576.1
ENST00000632610.1
ENST00000632616.1
ENST00000632671.1
ENST00000632678.1
ENST00000632735.1
ENST00000633046.1
ENST00000633168.1
ENST00000633184.1
ENST00000633301.1
ENST00000633332.1
ENST00000633726.1
ENST00000633744.1
ENST00000633904.1
ENST00000634024.1
ENST00000634042.1
ENST00000634137.1
ENST00000634169.1
CDS CCA 72 bp GGGAAGTTCCCGGAAGGCAGCGCTCAGGAACTACTCTaGGGTCTGGAGGGCGTCTCACAGGAAAACAGAAGG +
Preference number: 6 (lower is better)
Translates to: GKFPEGSAQELL*GLEGVSQENRR
Trigger: CCTTCTGTTTTCCTGTGAGACGCCCTCCAGACCCCAGAGTAGTTCCTGAGCGCTGCCTTCCGGGAACTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574953.5
ENST00000632671.1
CDS CAA 72 bp TGGTGTCGGCCATGGCTCGGAGCACCCGGCTGGGGGTaGGGAGTCACATTAGAAGTCCAGGAACAAGTCAAC +
Preference number: 6 (lower is better)
Translates to: WCRPWLGAPGWG*GVTLEVQEQVN
Trigger: GTTGACTTGTTCCTGGACTTCTAATGTGACTCCCAACCCCCAGCCGGGTGCTCCGAGCCATGGCCGACACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000632176.1
CDS CAA 90 bp GGCAGGTTAGTGACTGCCCTGAGGTCACAGCTCGCTGGCACCAACTaGGGCAGAGCTGGGAACTCCGAAGCTGTAGAAACAGCCAAGTGC +
Preference number: 6 (lower is better)
Translates to: GRLVTALRSQLAGTN*GRAGNSEAVETAKC
Trigger: GCACTTGGCTGTTTCTACAGCTTCGGAGTTCCCAGCTCTGCCCAAGTTGGTGCCAGCGAGCTGTGACCTCAGGGCAGTCACTAACCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572866.1
ENST00000632722.1
ENST00000633196.1
CDS CCA 72 bp GGAAGAGAGGCTTCATCCCAAGTGCTAAATCTGAGCTaGCGCCCAGAGGGCTGGGTTGAAAAGGGGCTGGAG +
Preference number: 6 (lower is better)
Translates to: GREASSQVLNLS*RPEGWVEKGLE
Trigger: CTCCAGCCCCTTTTCAACCCAGCCCTCTGGGCGCCAGCTCAGATTTAGCACTTGGGATGAAGCCTCTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000574011.1
ENST00000633160.1
ENST00000634090.1
CDS CCA 72 bp GAGACCGTGACCTCCCAGGTGGTTTTGCTAATCAGCTaGGTGCTTGGTACCCCTAGAGTGAGCTCTCCACCG +
Preference number: 6 (lower is better)
Translates to: ETVTSQVVLLIS*VLGTPRVSSPP
Trigger: CGGTGGAGAGCTCACTCTAGGGGTACCAAGCACCCAGCTGATTAGCAAAACCACCTGGGAGGTCACGGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000570954.1
ENST00000631957.1
ENST00000632056.1
CDS CAA 72 bp GGCCGCTTCTGGCCAGGGGAGGCCTCGATCCCACATTaGGTGCAGACTTTCTTCCTGCAGTCTTTGCAGAAC +
Preference number: 6 (lower is better)
Translates to: GRFWPGEASIPH*VQTFFLQSLQN
Trigger: GTTCTGCAAAGACTGCAGGAAGAAAGTCTGCACCAAATGTGGGATCGAGGCCTCCCCTGGCCAGAAGCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENST00000331302.12
ENST00000570638.5
ENST00000573780.5
ENST00000574953.5
ENST00000576001.5
ENST00000576420.5
ENST00000577079.5
ENST00000608278.2
ENST00000618002.4
ENST00000631551.1
ENST00000631558.1
ENST00000632083.1
ENST00000632610.1
ENST00000632616.1
ENST00000632671.1
ENST00000632735.1
ENST00000633301.1
ENST00000633726.1
ENST00000633904.1
ENST00000634024.1
ENST00000634042.1
ENST00000634169.1
CDS CAA 72 bp GTGACTGCCCTGAGGTCACAGCTCGCTGGCACCAACTaGGGCAGAGCTGGGAACTCCGAAGCTGTAGAAACA +
Preference number: 6 (lower is better)
Translates to: VTALRSQLAGTN*GRAGNSEAVET
Trigger: TGTTTCTACAGCTTCGGAGTTCCCAGCTCTGCCCAAGTTGGTGCCAGCGAGCTGTGACCTCAGGGCAGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572866.1
ENST00000632722.1
ENST00000633196.1
CDS TCA 72 bp GCACGGGGAGAAGGGTCACCTCCATTGTGCTGGCTCTaGAGAGCCACTGCATATTGCACAGTGCACGAGATG +
Preference number: 6 (lower is better)
Translates to: ARGEGSPPLCWL*RATAYCTVHEM
Trigger: CATCTCGTGCACTGTGCAATATGCAGTGGCTCTTCAGAGCCAGCACAATGGAGGTGACCCTTCTCCCCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572866.1
ENST00000632722.1
ENST00000633196.1
CDS CCA 72 bp GCCGCTTCTGGCCAGGGGAGGCCTCGATCCCACATTTaGTGCAGACTTTCTTCCTGCAGTCTTTGCAGAACA +
Preference number: 6 (lower is better)
Translates to: AASGQGRPRSHI*CRLSSCSLCRT
Trigger: TGTTCTGCAAAGACTGCAGGAAGAAAGTCTGCACCAAATGTGGGATCGAGGCCTCCCCTGGCCAGAAGCGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 22 transcripts:
ENST00000331302.12
ENST00000570638.5
ENST00000573780.5
ENST00000574953.5
ENST00000576001.5
ENST00000576420.5
ENST00000577079.5
ENST00000608278.2
ENST00000618002.4
ENST00000631551.1
ENST00000631558.1
ENST00000632083.1
ENST00000632610.1
ENST00000632616.1
ENST00000632671.1
ENST00000632735.1
ENST00000633301.1
ENST00000633726.1
ENST00000633904.1
ENST00000634024.1
ENST00000634042.1
ENST00000634169.1
CDS CCA 72 bp TCGCAGTTTCTGGTGAACGTGTCTGACCTCTCCTACTaGACCAAACACTCCCTCAGAGCAGGATGCCTCCTG +
Preference number: 6 (lower is better)
Translates to: SQFLVNVSDLSY*TKHSLRAGCLL
Trigger: CAGGAGGCATCCTGCTCTGAGGGAGTGTTTGGTCCAGTAGGAGAGGTCAGACACGTTCACCAGAAACTGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575634.5
ENST00000633046.1
ENST00000633168.1
CDS CAA 90 bp TGCCCAGAAAATGCCCAAGTGCTCCCAGGCTGCCGGGCACCTGGCTaGGGACGGGCAGTATCGAGCATTCATGCTATTTGTCTTTTAATG +
Preference number: 6 (lower is better)
Translates to: CPENAQVLPGCRAPG*GRAVSSIHAICLLM
Trigger: CATTAAAAGACAAATAGCATGAATGCTCGATACTGCCCGTCCCAAGCCAGGTGCCCGGCAGCCTGGGAGCACTTGGGCATTTTCTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000573448.1
ENST00000632511.1
ENST00000634137.1
CDS TCA 72 bp CATGCAAAGAACACTGGGAGTGAAGAGAAGGCGCAGTaGAGATCTTGCTCTGTGGCAGTCCTGGAGGGTCAG +
Preference number: 6 (lower is better)
Translates to: HAKNTGSEEKAQ*RSCSVAVLEGQ
Trigger: CTGACCCTCCAGGACTGCCACAGAGCAAGATCTTCACTGCGCCTTCTCTTCACTCCCAGTGTTCTTTGCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000572866.1
ENST00000632722.1
ENST00000633196.1
CDS CCA 72 bp CCTAGAGTGAGCTCTCCACCGCTGGCAGCTTTATCGTaGCTAACTCCTGTCTTCAGAGTCTCCATCTTGGCT +
Preference number: 6 (lower is better)
Translates to: PRVSSPPLAALS*LTPVFRVSILA
Trigger: AGCCAAGATGGAGACTCTGAAGACAGGAGTTAGCCACGATAAAGCTGCCAGCGGTGGAGAGCTCACTCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570954.1
ENST00000631957.1
ENST00000632056.1
CDS CAA 72 bp TATGTGGGTCTGGAAAGTCCCAGGCAGGCAGAATCTTaGCAGAGGAAACCTGATTTCGGCTCCCACCTGGGA +
Preference number: 6 (lower is better)
Translates to: YVGLESPRQAES*QRKPDFGSHLG
Trigger: TCCCAGGTGGGAGCCGAAATCAGGTTTCCTCTGCAAAGATTCTGCCTGCCTGGGACTTTCCAGACCCACATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000573448.1
ENST00000632511.1
ENST00000634137.1
CDS TCA 72 bp ACCACCGTTGTCGGGGGTGACCCGAGGTGTTCCAGATaGGGAGCTGAATCACTGGGACTTAAGTCAATAAGT +
Preference number: 6 (lower is better)
Translates to: TTVVGGDPRCSR*GAESLGLKSIS
Trigger: ACTTATTGACTTAAGTCCCAGTGATTCAGCTCCTCATCTGGAACACCTCGGGTCACCCCCGACAACGGTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000323434.12
ENST00000632000.1
ENST00000633184.1
CDS TCA 72 bp AAGTCCCAGGCAGGCAGAATCTTTGCAGAGGAAACCTaGTTTCGGCTCCCACCTGGGAACTGCTTGTTGAAG +
Preference number: 6 (lower is better)
Translates to: KSQAGRIFAEET*FRLPPGNCLLK
Trigger: CTTCAACAAGCAGTTCCCAGGTGGGAGCCGAAATCAGGTTTCCTCTGCAAAGATTCTGCCTGCCTGGGACTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000573448.1
ENST00000632511.1
ENST00000634137.1
CDS TCA 72 bp TCTTCCCAGAACTTCGCAGTTTCTGGTGAACGTGTCTaGCCTCTCCTACTGGACCAAACACTCCCTCAGAGC +
Preference number: 6 (lower is better)
Translates to: SSQNFAVSGERV*PLLLDQTLPQS
Trigger: GCTCTGAGGGAGTGTTTGGTCCAGTAGGAGAGGTCAGACACGTTCACCAGAAACTGCGAAGTTCTGGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000575634.5
ENST00000633046.1
ENST00000633168.1
CDS GCA 72 bp TTCACAGCCACTCAAAGCTGTCAGCTGCAGGCCTCATaGTTGCTGTCTCCAAAGTGCACGTACAAGTGTCCA +
Preference number: 6 (lower is better)
Translates to: FTATQSCQLQAS*LLSPKCTYKCP
Trigger: TGGACACTTGTACGTGCACTTTGGAGACAGCAAGCATGAGGCCTGCAGCTGACAGCTTTGAGTGGCTGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000573588.5
ENST00000574011.1
ENST00000575130.5
ENST00000609977.5
ENST00000632000.1
ENST00000632071.1
ENST00000632576.1
ENST00000632616.1
ENST00000633160.1
ENST00000633184.1
ENST00000633332.1
ENST00000633904.1
ENST00000634090.1
CDS CAA 72 bp ACAGCCACTCAAAGCTGTCAGCTGCAGGCCTCATGCTaGCTGTCTCCAAAGTGCACGTACAAGTGTCCACTA +
Preference number: 6 (lower is better)
Translates to: TATQSCQLQASC*LSPKCTYKCPL
Trigger: TAGTGGACACTTGTACGTGCACTTTGGAGACAGCAAGCATGAGGCCTGCAGCTGACAGCTTTGAGTGGCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000573588.5
ENST00000574011.1
ENST00000575130.5
ENST00000609977.5
ENST00000632000.1
ENST00000632071.1
ENST00000632576.1
ENST00000632616.1
ENST00000633160.1
ENST00000633184.1
ENST00000633332.1
ENST00000633904.1
ENST00000634090.1
CDS CAA 90 bp GTCAGGTTCACAGCCACTCAAAGCTGTCAGCTGCAGGCCTCATGCTaGCTGTCTCCAAAGTGCACGTACAAGTGTCCACTACACAAATTC +
Preference number: 6 (lower is better)
Translates to: VRFTATQSCQLQASC*LSPKCTYKCPLHKF
Trigger: GAATTTGTGTAGTGGACACTTGTACGTGCACTTTGGAGACAGCAAGCATGAGGCCTGCAGCTGACAGCTTTGAGTGGCTGTGAACCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000573588.5
ENST00000574011.1
ENST00000575130.5
ENST00000609977.5
ENST00000632000.1
ENST00000632071.1
ENST00000632576.1
ENST00000632616.1
ENST00000633160.1
ENST00000633184.1
ENST00000633332.1
ENST00000633904.1
ENST00000634090.1
CDS CAA 90 bp CCGGGCACCTGGCTTGGGACGGGCAGTATCGAGCATTCATGCTATTaGTCTTTTAATGCAGAAACGCAGGCCTGCTTCCATTTACGTGAT +
Preference number: 6 (lower is better)
Translates to: PGTWLGTGSIEHSCY*SFNAETQACFHLRD
Trigger: ATCACGTAAATGGAAGCAGGCCTGCGTTTCTGCATTAAAAGACAAATAGCATGAATGCTCGATACTGCCCGTCCCAAGCCAGGTGCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000573448.1
ENST00000632511.1
ENST00000634137.1
CDS GCA 72 bp TGTCAGCTGCAGGCCTCATGCTTGCTGTCTCCAAAGTaGACGTACAAGTGTCCACTACACAAATTCTGCTGG +
Preference number: 6 (lower is better)
Translates to: CQLQASCLLSPK*TYKCPLHKFCW
Trigger: CCAGCAGAATTTGTGTAGTGGACACTTGTACGTGCACTTTGGAGACAGCAAGCATGAGGCCTGCAGCTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000573588.5
ENST00000574011.1
ENST00000575130.5
ENST00000609977.5
ENST00000632000.1
ENST00000632071.1
ENST00000632576.1
ENST00000632616.1
ENST00000633160.1
ENST00000633184.1
ENST00000633332.1
ENST00000633904.1
ENST00000634090.1
CDS GCA 72 bp ACTGGACCAAACACTCCCTCAGAGCAGGATGCCTCCTaGCCATATGGTACTGAAAACTGTGGCACTGGAATA +
Preference number: 6 (lower is better)
Translates to: TGPNTPSEQDAS*PYGTENCGTGI
Trigger: TATTCCAGTGCCACAGTTTTCAGTACCATATGGGCAGGAGGCATCCTGCTCTGAGGGAGTGTTTGGTCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000575634.5
ENST00000633046.1
ENST00000633168.1
CDS CAA 90 bp AGAAGGGTCACCTCCATTGTGCTGGCTCTGAAGAGCCACTGCATATaGCACAGTGCACGAGATGAATCCAAAATGAATCAGACAGCGGCT +
Preference number: 6 (lower is better)
Translates to: RRVTSIVLALKSHCI*HSARDESKMNQTAA
Trigger: AGCCGCTGTCTGATTCATTTTGGATTCATCTCGTGCACTGTGCAATATGCAGTGGCTCTTCAGAGCCAGCACAATGGAGGTGACCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572866.1
ENST00000632722.1
ENST00000633196.1
CDS GCA 72 bp CCAAAGTGCACGTACAAGTGTCCACTACACAAATTCTaGTGGAGGCAGCTGTGTCTTGGTAGCCTAATCTGC +
Preference number: 6 (lower is better)
Translates to: PKCTYKCPLHKF*WRQLCLGSLIC
Trigger: GCAGATTAGGCTACCAAGACACAGCTGCCTCCAGCAGAATTTGTGTAGTGGACACTTGTACGTGCACTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000573588.5
ENST00000574011.1
ENST00000575130.5
ENST00000609977.5
ENST00000632000.1
ENST00000632071.1
ENST00000632576.1
ENST00000632616.1
ENST00000633160.1
ENST00000633184.1
ENST00000633332.1
ENST00000633904.1
ENST00000634090.1
CDS CCA 72 bp AAGTGCACGTACAAGTGTCCACTACACAAATTCTGCTaGAGGCAGCTGTGTCTTGGTAGCCTAATCTGCGGA +
Preference number: 6 (lower is better)
Translates to: KCTYKCPLHKFC*RQLCLGSLICG
Trigger: TCCGCAGATTAGGCTACCAAGACACAGCTGCCTCCAGCAGAATTTGTGTAGTGGACACTTGTACGTGCACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000323434.12
ENST00000331302.12
ENST00000573588.5
ENST00000574011.1
ENST00000575130.5
ENST00000609977.5
ENST00000632000.1
ENST00000632071.1
ENST00000632576.1
ENST00000632616.1
ENST00000633160.1
ENST00000633184.1
ENST00000633332.1
ENST00000633904.1
ENST00000634090.1
CDS CCA 72 bp AATCTTTGCAGAGGAAACCTGATTTCGGCTCCCACCTaGGAACTGCTTGTTGAAGGAGCCCAAGAGAAACCT +
Preference number: 6 (lower is better)
Translates to: NLCRGNLISAPT*ELLVEGAQEKP
Trigger: AGGTTTCTCTTGGGCTCCTTCAACAAGCAGTTCCCAGGTGGGAGCCGAAATCAGGTTTCCTCTGCAAAGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000573448.1
ENST00000632511.1
ENST00000634137.1
CDS CCA 72 bp ATTGCAAACGTGACCAGAATAATACGTAGGTACCTGTaGCCCCTGAGCACTCTCTGCCCAGAAAATGCCCAA +
Preference number: 6 (lower is better)
Translates to: IANVTRIIRRYL*PLSTLCPENAQ
Trigger: TTGGGCATTTTCTGGGCAGAGAGTGCTCAGGGGCCACAGGTACCTACGTATTATTCTGGTCACGTTTGCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000573448.1
ENST00000632511.1
ENST00000634137.1
CDS CAA 72 bp AGATTTGGGACGCTTCCTCTTAGAGGGCAGCCCTCTTaGGGACTGTTAGTCTGGCCACTTTTACACATTTCA +
Preference number: 6 (lower is better)
Translates to: RFGTLPLRGQPS*GLLVWPLLHIS
Trigger: TGAAATGTGTAAAAGTGGCCAGACTAACAGTCCCAAAGAGGGCTGCCCTCTAAGAGGAAGCGTCCCAAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323434.12
ENST00000632000.1
ENST00000633184.1
CDS CAA 72 bp TGGCTTGGGACGGGCAGTATCGAGCATTCATGCTATTaGTCTTTTAATGCAGAAACGCAGGCCTGCTTCCAT +
Preference number: 6 (lower is better)
Translates to: WLGTGSIEHSCY*SFNAETQACFH
Trigger: ATGGAAGCAGGCCTGCGTTTCTGCATTAAAAGACAAATAGCATGAATGCTCGATACTGCCCGTCCCAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000573448.1
ENST00000632511.1
ENST00000634137.1
CDS TCA 72 bp TGTTTTTACCTCTTCCCAGAACTTCGCAGTTTCTGGTaGACGTGTCTGACCTCTCCTACTGGACCAAACACT +
Preference number: 6 (lower is better)
Translates to: CFYLFPELRSFW*TCLTSPTGPNT
Trigger: AGTGTTTGGTCCAGTAGGAGAGGTCAGACACGTTCACCAGAAACTGCGAAGTTCTGGGAAGAGGTAAAAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000575634.5
ENST00000633046.1
ENST00000633168.1
CDS GCA 72 bp AACTCCTGTCTTCAGAGTCTCCATCTTGGCTGCTCCTaGCTTAATTCAGGCCTTCATTATGGCGAATTGGAT +
Preference number: 6 (lower is better)
Translates to: NSCLQSLHLGCS*LNSGLHYGELD
Trigger: ATCCAATTCGCCATAATGAAGGCCTGAATTAAGGCAGGAGCAGCCAAGATGGAGACTCTGAAGACAGGAGTT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570954.1
ENST00000631957.1
ENST00000632056.1
CDS CAA 72 bp ACCTCCATTGTGCTGGCTCTGAAGAGCCACTGCATATaGCACAGTGCACGAGATGAATCCAAAATGAATCAG +
Preference number: 6 (lower is better)
Translates to: TSIVLALKSHCI*HSARDESKMNQ
Trigger: CTGATTCATTTTGGATTCATCTCGTGCACTGTGCAATATGCAGTGGCTCTTCAGAGCCAGCACAATGGAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572866.1
ENST00000632722.1
ENST00000633196.1
CDS TCA 72 bp ATCCAAAATGAATCAGACAGCGGCTCCAATAAATGCTaGGGCCATGCAAAGAACACTGGGAGTGAAGAGAAG +
Preference number: 6 (lower is better)
Translates to: IQNESDSGSNKC*GHAKNTGSEEK
Trigger: CTTCTCTTCACTCCCAGTGTTCTTTGCATGGCCTCAGCATTTATTGGAGCCGCTGTCTGATTCATTTTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572866.1
ENST00000632722.1
ENST00000633196.1
CDS CAA 90 bp AAACTGAACAGATTTGGGACGCTTCCTCTTAGAGGGCAGCCCTCTTaGGGACTGTTAGTCTGGCCACTTTTACACATTTCAAGCATTTTT +
Preference number: 6 (lower is better)
Translates to: KLNRFGTLPLRGQPS*GLLVWPLLHISSIF
Trigger: AAAAATGCTTGAAATGTGTAAAAGTGGCCAGACTAACAGTCCCAAAGAGGGCTGCCCTCTAAGAGGAAGCGTCCCAAATCTGTTCAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000323434.12
ENST00000632000.1
ENST00000633184.1
CDS TCA 72 bp TCTGAAGAGCCACTGCATATTGCACAGTGCACGAGATaGATCCAAAATGAATCAGACAGCGGCTCCAATAAA +
Preference number: 6 (lower is better)
Translates to: SEEPLHIAQCTR*IQNESDSGSNK
Trigger: TTTATTGGAGCCGCTGTCTGATTCATTTTGGATTCATCTCGTGCACTGTGCAATATGCAGTGGCTCTTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000572866.1
ENST00000632722.1
ENST00000633196.1
CDS CCA 72 bp GCTCCTGCCTTAATTCAGGCCTTCATTATGGCGAATTaGATAATTAGTATCCACGAATCCTCTGCATCTGGA +
Preference number: 6 (lower is better)
Translates to: APALIQAFIMAN*IISIHESSASG
Trigger: TCCAGATGCAGAGGATTCGTGGATACTAATTATCCAATTCGCCATAATGAAGGCCTGAATTAAGGCAGGAGC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000570954.1
ENST00000631957.1
ENST00000632056.1