RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RPGR (Homo sapiens)

Ensembl gene IDs: ENSG00000156313

Ensembl transcript IDs: ENST00000339363.7, ENST00000464437.1, ENST00000474584.5, ENST00000482855.5, ENST00000494707.6, ENST00000494841.1, ENST00000642170.1, ENST00000642373.1, ENST00000642395.2, ENST00000642558.1, ENST00000642739.1, ENST00000644238.1, ENST00000644337.1, ENST00000645032.1, ENST00000645124.1, ENST00000646020.1, ENST00000647261.1

Found 586 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCACCTTCTCCGGAATTTCAGACACCAGCTGGGGTGTTCTGTGATTaGCCAGGAGCTGATTGGGAAGACCTAACTTCCCATTCTCAGGTT +
Preference number: 1 (lower is better)
Translates to: SPSPEFQTPAGVFCD*PGADWEDLTSHSQV
Trigger: AACCTGAGAATGGGAAGTTAGGTCTTCCCAATCAGCTCCTGGGCAATCACAGAACACCCCAGCTGGTGTCTGAAATTCCGGAGAAGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642373.1
3UTR TCA 90 bp ACTTTGGGTTCTGAAGTTTCAAAAAGAAAAGTGCCAAGACCCAGCTaGCCAAATTGTCCCAGCCCAAAGGTATACACAGCATTCTCCGTG +
Preference number: 1 (lower is better)
Translates to: TLGSEVSKRKVPRPS*PNCPSPKVYTAFSV
Trigger: CACGGAGAATGCTGTGTATACCTTTGGGCTGGGACAATTTGGTCAGCTGGGTCTTGGCACTTTTCTTTTTGAAACTTCAGAACCCAAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642373.1
3UTR GCA 90 bp TGGGATCTTTCCTCATCTGAAAATGCTTCGATAGTCGTAGCTGGCTaGGTCATGAAAATCCCTTGTGACACATGTTGTTTACATGCTTTC +
Preference number: 1 (lower is better)
Translates to: WDLSSSENASIVVAG*VMKIPCDTCCLHAF
Trigger: GAAAGCATGTAAACAACATGTGTCACAAGGGATTTTCATGACGCAGCCAGCTACGACTATCGAAGCATTTTCAGATGAGGAAAGATCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646020.1
3UTR CAA 90 bp AGCATTCTCCGTGAGAACCACAGTATGCTCTCCACCACAGGCTACTaGGATCACCTTCTCCGGAATTTCAGACACCAGCTGGGGTGTTCT +
Preference number: 2 (lower is better)
Translates to: SILRENHSMLSTTGY*DHLLRNFRHQLGCS
Trigger: AGAACACCCCAGCTGGTGTCTGAAATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGGAGAGCATACTGTGGTTCTCACGGAGAATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642373.1
3UTR-3UTR TCA 90 bp GGATCACCTTCTCCGGAATTTCAGACACCAGCTGGGGTGTTCTGTGATTGCCCATCCATCCTCTGCAACTaGACTGAAAGACAGCACAGG +
Preference number: 2 (lower is better)
Translates to: GSPSPEFQTPAGVFCDCPSILCN*TERQHR
Trigger: CCTGTGCTGTCTTTCAGTTCAGTTGCAGAGGATGGA...TGGGCAATCACAGAACACCCCAGCTGGTGTCTGAAATTCCGGAGAAGGTGATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642373.1
3UTR-3UTR CCA 90 bp GTATACACAGCATTCTCCGTGAGAACCACAGTATGCTCTCCACCACAGGCTACTAGACAGGTTTCCCAATaGTCACTTGCTGAGGGACAC +
Preference number: 2 (lower is better)
Translates to: VYTAFSVRTTVCSPPQATRQVSQ*SLAEGH
Trigger: GTGTCCCTCAGCAAGTGACCATTGGGAAACCTGTCT...AGTAGCCTGTGGTGGAGAGCATACTGTGGTTCTCACGGAGAATGCTGTGTATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642373.1
3UTR-3UTR TCA 90 bp CTACTTGGATCACCTTCTCCGGAATTTCAGACACCAGCTGGGGTGTTCTGTGATCCAATGGTCACTTGCTaGGGGACACAGACATTACTT +
Preference number: 2 (lower is better)
Translates to: LLGSPSPEFQTPAGVFCDPMVTC*GTQTLL
Trigger: AAGTAATGTCTGTGTCCCTCAGCAAGTGACCATTGG...ATCACAGAACACCCCAGCTGGTGTCTGAAATTCCGGAGAAGGTGATCCAAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642373.1
3UTR-3UTR TCA 90 bp TATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTTGACAGGCGGATCACCTaGGGTCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: YSDDSDSCGSGRHLYYHFDRRIT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGTGATCCGCCTGTC...AAAGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642739.1
3UTR-3UTR TCA 90 bp GAAAATGCTTCGATAGTCGTAGCTGGCTGCGTCATGAAAATCCCTTGTGACACATGGAATTCAGGCTCATaGTGTGTGTCATGTTTAAGA +
Preference number: 2 (lower is better)
Translates to: ENASIVVAGCVMKIPCDTWNSGS*CVSCLR
Trigger: TCTTAAACATGACACACATCATGAGCCTGAATTCCA...TGTGTCACAAGGGATTTTCATGACGCAGCCAGCTACGACTATCGAAGCATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646020.1
3UTR-3UTR GCA 90 bp GTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTTTGAACAGAAAAATCTaGTGGGCATGGTGGCTCACG +
Preference number: 2 (lower is better)
Translates to: VSYGFYLWERLIVILDNLLNRKI*WAWWLT
Trigger: CGTGAGCCACCATGCCCAGCAGATTTTTCTGTTCAA...AAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000642739.1
3UTR-3UTR CCA 90 bp AAAATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCCATTGTACTCACAAATaGCCCGTTCCTCTAGGTTGG +
Preference number: 2 (lower is better)
Translates to: KMIWSPMDFISGSGSLLFHCTHK*PVPLGW
Trigger: CCAACCTAGAGGAACGGGCCATTTGTGAGTACAATG...GAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
3UTR-3UTR TCA 90 bp TTCTCAAGAACACTGATACTTGATCATGGGCAGGTCATCTTCTCTGAAAGCTTCATATCTTGCATTTGCTaGTTCCTAGTTTCCCTAGCC +
Preference number: 2 (lower is better)
Translates to: FSRTLILDHGQVIFSESFISCIC*FLVSLA
Trigger: GGCTAGGGAAACTAGGAATCAGCAAATGCAAGATAT...GAAGCTTTCAGAGAAGATGACCTGCCCATGATCAAGTATCAGTGTTCTTGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647261.1
3UTR-3UTR GCA 90 bp TTTAAAATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTACCTTCAAAAATTATTTaGCATTGGCCGGGCGTGGTG +
Preference number: 2 (lower is better)
Translates to: FKMIWSPMDFISGSGSLLPSKII*HWPGVV
Trigger: CACCACGCCCGGCCAATGGCAAATAATTTTTGAAGG...TAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646020.1
3UTR-3UTR CCA 90 bp ATCTTCTCTCTGTATTTGTTGGTGGGATATTCTGATGATTCTGACTCATGTGGTCATTGTACTCACAAATaGCCCGTTCCTCTAGGTTGG +
Preference number: 2 (lower is better)
Translates to: IFSLYLLVGYSDDSDSCGHCTHK*PVPLGW
Trigger: CCAACCTAGAGGAACGGGCCATTTGTGAGTACAATG...ACCACATGAGTCAGAATCATCAGAATATCCCACCAACAAATACAGAGAGAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
3UTR-3UTR GCA 90 bp TCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTTTGGTAAGAGCTGTATCCTaGGTCAGTTCCCCAATTGTT +
Preference number: 2 (lower is better)
Translates to: SYGFYLWERLIVILDNLLVRAVS*VSSPIV
Trigger: AACAATTGGGGAACTGACGCAGGATACAGCTCTTAC...CAAAAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646020.1
3UTR-3UTR TCA 90 bp CTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATTTCAATAGTTTCAGCTaGGCTATCATCATTGGTTCT +
Preference number: 2 (lower is better)
Translates to: LVSYGFYLWERLIVILDNFNSFS*AIIIGS
Trigger: AGAACCAATGATGATAGCTCAGCTGAAACTATTGAA...ATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
3UTR-3UTR TCA 90 bp TATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTTGGATCTTTCCTCATCTaGAAATGCTTCGATAGTCGT +
Preference number: 2 (lower is better)
Translates to: YSDDSDSCGSGRHLYYHFGSFLI*KCFDSR
Trigger: ACGACTATCGAAGCATTTTCAGATGAGGAAAGATCC...AAAGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646020.1
3UTR-3UTR GCA 90 bp GGAACACTTTCATCATCTCCCACAGTTTTCTTCTTGCTTTCCACATTTTCAGCACCACAGTTTTCTTCTTaGTTTCCACATTTTCAGCAT +
Preference number: 2 (lower is better)
Translates to: GTLSSSPTVFFLLSTFSAPQFSS*FPHFQH
Trigger: ATGCTGAAAATGTGGAAAGCAAGAAGAAAACTGTGG...TGCTGAAAATGTGGAAAGCAAGAAGAAAACTGTGGGAGATGATGAAAGTGTTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
3UTR-3UTR CCA 90 bp ATGTATCCTTTTGGGTTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGTCTCTCTGTATTTGTTaGTGGGATATTCTGATGATT +
Preference number: 2 (lower is better)
Translates to: MYPFGFSLYSQMARSSRLSLCIC*WDILMI
Trigger: AATCATCAGAATATCCCACCAACAAATACAGAGAGA...CAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAACCCAAAAGGATACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
3UTR-3UTR TCA 90 bp GATATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTAAGGCTTTCTACAGTTaGAGAATTATCTATCTCTGC +
Preference number: 2 (lower is better)
Translates to: DILMILTHVVLVGIFIITKAFYS*RIIYLC
Trigger: GCAGAGATAGATAATTCTTCAACTGTAGAAAGCCTT...AGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAATATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646020.1
3UTR-3UTR GCA 90 bp TCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGCCACAGTTTTCTTCTTaGTTTCCACATTTTCAGCAT +
Preference number: 2 (lower is better)
Translates to: SRISNELLSASSSMYPFGPQFSS*FPHFQH
Trigger: ATGCTGAAAATGTGGAAAGCAAGAAGAAAACTGTGG...CCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
3UTR-3UTR GCA 90 bp TCTTCTCTCTGTATTTGTTGGTGGGATATTCTGATGATTCTGACTCATGTGGTTCCACAGTTTTCTTCTTaGTTTCCACATTTTCAGCAT +
Preference number: 2 (lower is better)
Translates to: SSLCICWWDILMILTHVVPQFSS*FPHFQH
Trigger: ATGCTGAAAATGTGGAAAGCAAGAAGAAAACTGTGG...AACCACATGAGTCAGAATCATCAGAATATCCCACCAACAAATACAGAGAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
3UTR-3UTR GCA 90 bp GAAATTACAGAACAGTCAGTGAATACATTGAGGGCATATAACACATACCAGAAAGCCAAAATTTACCAGTaGCTCCTATTGTCTTTGGCT +
Preference number: 2 (lower is better)
Translates to: EITEQSVNTLRAYNTYQKAKIYQ*LLLSLA
Trigger: AGCCAAAGACAATAGGAGGCACTGGTAAATTTTGGC...TTTCTGGTATGTGTTATATGCCCTCAATGTATTCACTGACTGTTCTGTAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
3UTR-3UTR TCA 90 bp CTGTTTTCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTCAATAGTTTCAGCTaGGCTATCATCATTGGTTCT +
Preference number: 2 (lower is better)
Translates to: LFSRISNELLSASSSMYPFNSFS*AIIIGS
Trigger: AGAACCAATGATGATAGCTCAGCTGAAACTATTGAA...AGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGAAAACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
3UTR-3UTR TCA 90 bp CACTGTTTTCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCTTCAATAGTTTCAGCTaGGCTATCATCATTGGTTCT +
Preference number: 2 (lower is better)
Translates to: HCFLGFLMNCYLHHQACIFNSFS*AIIIGS
Trigger: AGAACCAATGATGATAGCTCAGCTGAAACTATTGAA...GATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGAAAACAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
3UTR-3UTR GCA 90 bp CTGTTTTCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTCCACAGTTTTCTTCTTaGTTTCCACATTTTCAGCAT +
Preference number: 2 (lower is better)
Translates to: LFSRISNELLSASSSMYPPQFSS*FPHFQH
Trigger: ATGCTGAAAATGTGGAAAGCAAGAAGAAAACTGTGG...AGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGAAAACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
3UTR-3UTR GCA 90 bp ATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTTTGGATTTCTAATGAACTaGTATCTGCATCATCAAGCA +
Preference number: 2 (lower is better)
Translates to: ILMILTHVVLVGIFIITFGFLMN*YLHHQA
Trigger: TGCTTGATGATGCAGATAGCAGTTCATTAGAAATCC...AAAAGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
3UTR-3UTR GCA 90 bp GAAATTACAGAACAGTCAGTGAATACATTGAGGGCATATAACACATACCAGAAAAGAGTTAGAAGGGACTaGAGTTATCACATCATCTCA +
Preference number: 2 (lower is better)
Translates to: EITEQSVNTLRAYNTYQKRVRRD*SYHIIS
Trigger: TGAGATGATGTGATAACTGCAGTCCCTTCTAACTCT...TTTCTGGTATGTGTTATATGCCCTCAATGTATTCACTGACTGTTCTGTAATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
3UTR-3UTR GCA 90 bp AGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGTTTAAATTCATGATCCTCTaGTTTGTCTGTAAGGTCATC +
Preference number: 2 (lower is better)
Translates to: RISNELLSASSSMYPFGFKFMIL*FVCKVI
Trigger: GATGACCTTACAGACAAAGCAGAGGATCATGAATTT...AAACCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645124.1
ENST00000646020.1
3UTR-3UTR CCA 90 bp TTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCTTTTTCTTTCTTTTTCTCTCTGTATTTGTTaGTGGGATATTCTGATGATT +
Preference number: 2 (lower is better)
Translates to: FHCTHKWPVPLGWLFLSFSLCIC*WDILMI
Trigger: AATCATCAGAATATCCCACCAACAAATACAGAGAGA...AAAAGAAAGAAAAAGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
3UTR GCA 72 bp CCGGAATTTCAGACACCAGCTGGGGTGTTCTGTGATTaGCCAGGAGCTGATTGGGAAGACCTAACTTCCCAT +
Preference number: 3 (lower is better)
Translates to: PEFQTPAGVFCD*PGADWEDLTSH
Trigger: ATGGGAAGTTAGGTCTTCCCAATCAGCTCCTGGGCAATCACAGAACACCCCAGCTGGTGTCTGAAATTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642373.1
3UTR-3UTR CAA 90 bp GGATCACCTTCTCCGGAATTTCAGACACCAGCTGGGGTGTTCTGTGATTGCCCAATAGCTCACCATCTGTaGTTACAAAAGCTGAATGGT +
Preference number: 3 (lower is better)
Translates to: GSPSPEFQTPAGVFCDCPIAHHL*LQKLNG
Trigger: ACCATTCAGCTTTTGTAACAACAGATGGTGAGCTAT...TGGGCAATCACAGAACACCCCAGCTGGTGTCTGAAATTCCGGAGAAGGTGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642373.1
3UTR-3UTR CAA 90 bp TTTCAAAAAGAAAAGTGCCAAGACCCAGCTGACCAAATTGTCCCAGCCCAAAGGTTTCCCAATGGTCACTaGCTGAGGGACACAGACATT +
Preference number: 3 (lower is better)
Translates to: FQKEKCQDPADQIVPAQRFPNGH*LRDTDI
Trigger: AATGTCTGTGTCCCTCAGCAAGTGACCATTGGGAAA...CCTTTGGGCTGGGACAATTTGGTCAGCTGGGTCTTGGCACTTTTCTTTTTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642373.1
3UTR TCA 72 bp TCTGAAGTTTCAAAAAGAAAAGTGCCAAGACCCAGCTaGCCAAATTGTCCCAGCCCAAAGGTATACACAGCA +
Preference number: 3 (lower is better)
Translates to: SEVSKRKVPRPS*PNCPSPKVYTA
Trigger: TGCTGTGTATACCTTTGGGCTGGGACAATTTGGTCAGCTGGGTCTTGGCACTTTTCTTTTTGAAACTTCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642373.1
3UTR CCA 72 bp AATATCCACAAGAGATCCAGGAGACAGGTTTCCCAATaGTCACTTGCTGAGGGACACAGACATTACTTACAT +
Preference number: 3 (lower is better)
Translates to: NIHKRSRRQVSQ*SLAEGHRHYLH
Trigger: ATGTAAGTAATGTCTGTGTCCCTCAGCAAGTGACCATTGGGAAACCTGTCTCCTGGATCTCTTGTGGATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642373.1
3UTR-3UTR CAA 90 bp TCCTCATCTGAAAATGCTTCGATAGTCGTAGCTGGCTGCGTCATGAAAATCCCTCAAGCATGTATCCTTTaGGGTTTTCATTGTACTCAC +
Preference number: 3 (lower is better)
Translates to: SSSENASIVVAGCVMKIPQACIL*GFHCTH
Trigger: GTGAGTACAATGAAAACCCAAAAGGATACATGCTTG...AGGGATTTTCATGACGCAGCCAGCTACGACTATCGAAGCATTTTCAGATGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646020.1
3UTR-3UTR CAA 90 bp TCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCTTTTTCTTTCTTTTCATCCTTCAAAAATTATTaGCCATTGGCCGGGCGTGGT +
Preference number: 3 (lower is better)
Translates to: SLYSQMARSSRLAFSFFSSFKNY*PLAGRG
Trigger: ACCACGCCCGGCCAATGGCAAATAATTTTTGAAGGA...TGAAAAGAAAGAAAAAGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000646020.1
3UTR TCA 72 bp GATAGTCGTAGCTGGCTGCGTCATGAAAATCCCTTGTaGCACATGTTGTTTACATGCTTTCCCTTCTTTCAT +
Preference number: 3 (lower is better)
Translates to: DSRSWLRHENPL*HMLFTCFPFFH
Trigger: ATGAAAGAAGGGAAAGCATGTAAACAACATGTGTCACAAGGGATTTTCATGACGCAGCCAGCTACGACTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646020.1
3UTR GCA 72 bp TCCTCATCTGAAAATGCTTCGATAGTCGTAGCTGGCTaGGTCATGAAAATCCCTTGTGACACATGTTGTTTA +
Preference number: 3 (lower is better)
Translates to: SSSENASIVVAG*VMKIPCDTCCL
Trigger: TAAACAACATGTGTCACAAGGGATTTTCATGACGCAGCCAGCTACGACTATCGAAGCATTTTCAGATGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646020.1
3UTR-3UTR CAA 90 bp ATGTATCCTTTTGGGTTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGTCTGGGAGCGGCTCATaGTTATTCTTGACAATCTTT +
Preference number: 3 (lower is better)
Translates to: MYPFGFSLYSQMARSSRLSGSGS*LFLTIF
Trigger: AAAGATTGTCAAGAATAACAATGAGCCGCTCCCAGA...CAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAACCCAAAAGGATACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
3UTR-3UTR CAA 90 bp CTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATTCTGGGAGCGGCTCATaGTTATTCTTGACAATCTTT +
Preference number: 3 (lower is better)
Translates to: LVSYGFYLWERLIVILDNSGSGS*LFLTIF
Trigger: AAAGATTGTCAAGAATAACAATGAGCCGCTCCCAGA...ATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
3UTR-3UTR CAA 90 bp AGAACACTGATACTTGATCATGGGCAGGTCATCTTCTCTGAAAGCTTCTTTGGGCAGTATATCTTGCATTaGCTGATTCCTAGTTTCCCT +
Preference number: 3 (lower is better)
Translates to: RTLILDHGQVIFSESFFGQYILH*LIPSFP
Trigger: AGGGAAACTAGGAATCAGCAAATGCAAGATATACTG...CCCAAAGAAGCTTTCAGAGAAGATGACCTGCCCATGATCAAGTATCAGTGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647261.1
3UTR-3UTR CAA 90 bp AAAATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTCTGGGAGCGGCTCATaGTTATTCTTGACAATCTTT +
Preference number: 3 (lower is better)
Translates to: KMIWSPMDFISGSGSLLFSGSGS*LFLTIF
Trigger: AAAGATTGTCAAGAATAACAATGAGCCGCTCCCAGA...GAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
3UTR-3UTR CAA 90 bp CACTGTTTTCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCCTTTTGGGTTTTCATaGTACTCACAAATGGCCCGT +
Preference number: 3 (lower is better)
Translates to: HCFLGFLMNCYLHHQACIPFGFS*YSQMAR
Trigger: ACGGGCCATTTGTGAGTACAATGAAAACCCAAAAGG...GATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGAAAACAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
3UTR-3UTR CAA 90 bp AAAATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCCAAGCATGTATCCTTTaGGGTTTTCATTGTACTCAC +
Preference number: 3 (lower is better)
Translates to: KMIWSPMDFISGSGSLLFQACIL*GFHCTH
Trigger: GTGAGTACAATGAAAACCCAAAAGGATACATGCTTG...GAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
3UTR-3UTR CAA 90 bp TTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGTTTTCATCCTTTTGGGTTTTCATaGTACTCACAAATGGCCCGT +
Preference number: 3 (lower is better)
Translates to: FLMNCYLHHQACILLGFHPFGFS*YSQMAR
Trigger: ACGGGCCATTTGTGAGTACAATGAAAACCCAAAAGG...ATGAAAACCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
3UTR-3UTR CAA 90 bp TTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCTTTTTCTTTCTTTTGTCTTTGCTTGGTGTaGTTTCACTGTTTTCTAGGA +
Preference number: 3 (lower is better)
Translates to: FSLYSQMARSSRLAFSFFCLCLV*FHCFLG
Trigger: TCCTAGAAAACAGTGAAACAACACCAAGCAAAGACA...AAAGAAAGAAAAAGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
3UTR-3UTR CAA 90 bp AAAATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTCTATCTCTGCTTCTTaGGTCATTTCATCTAGCAAA +
Preference number: 3 (lower is better)
Translates to: KMIWSPMDFISGSGSLLFSISAS*VISSSK
Trigger: TTTGCTAGATGAAATGACCAAAGAAGCAGAGATAGA...GAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646020.1
CDS-3UTR GCA 90 bp GAAAAGTGCCAAGACCCAGCTGACCAAATTGTCCCAGCCCAAAGGTATACACAGCTTCCGGCTCCCTCATaGCACGGGCAGTACGGGCAG +
Preference number: 4 (lower is better)
Translates to: EKCQDPADQIVPAQRYTQLPAPS*HGQYGQ
Trigger: CTGCCCGTACTGCCCGTGGCATGAGGGAGCCGGAAG...CTGTGTATACCTTTGGGCTGGGACAATTTGGTCAGCTGGGTCTTGGCACTTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR TCA 90 bp GTATACACAGCATTCTCCGTGAGAACCACAGTATGCTCTCCACCACAGGCTACTGTGCCAAGACCCAGCTaGCCAAATTGTCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: VYTAFSVRTTVCSPPQATVPRPS*PNCPSP
Trigger: TGGGCTGGGACAATTTGGTCAGCTGGGTCTTGGCAC...AGTAGCCTGTGGTGGAGAGCATACTGTGGTTCTCACGGAGAATGCTGTGTATAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642373.1
3UTR CAA 72 bp CGTGAGAACCACAGTATGCTCTCCACCACAGGCTACTaGGATCACCTTCTCCGGAATTTCAGACACCAGCTG +
Preference number: 4 (lower is better)
Translates to: RENHSMLSTTGY*DHLLRNFRHQL
Trigger: CAGCTGGTGTCTGAAATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGGAGAGCATACTGTGGTTCTCACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR CCA 90 bp GTATACACAGCATTCTCCGTGAGAACCACAGTATGCTCTCCACCACAGGCTACTCCCCCAAGTTCCGCATaGCGAAACTCCGGAGATCAA +
Preference number: 4 (lower is better)
Translates to: VYTAFSVRTTVCSPPQATPPSSA*RNSGDQ
Trigger: TTGATCTCCGGAGTTTCGCCATGCGGAACTTGGGGG...AGTAGCCTGTGGTGGAGAGCATACTGTGGTTCTCACGGAGAATGCTGTGTATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR TCA 90 bp CACAGGCTACTTGGATCACCTTCTCCGGAATTTCAGACACCAGCTGGGGTGTTCGATCCTAATCCTAACTaGCCCCAGTTGTTACTGCCA +
Preference number: 4 (lower is better)
Translates to: HRLLGSPSPEFQTPAGVFDPNPN*PQLLLP
Trigger: TGGCAGTAACAACTGGGGTCAGTTAGGATTAGGATC...GAACACCCCAGCTGGTGTCTGAAATTCCGGAGAAGGTGATCCAAGTAGCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR TCA 90 bp ATTCTCCGTGAGAACCACAGTATGCTCTCCACCACAGGCTACTTGGATCACCTTATTGCCTCCTTCTGTTaGCACCAGGGTGTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: ILRENHSMLSTTGYLDHLIASFC*HQGVVP
Trigger: AGGAACCACACCCTGGTGTCAACAGAAGGAGGCAAT...AAGGTGATCCAAGTAGCCTGTGGTGGAGAGCATACTGTGGTTCTCACGGAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR TCA 90 bp CACAGTATGCTCTCCACCACAGGCTACTTGGATCACCTTCTCCGGAATTTCAGAACACAGCATTCTCCGTaGGAACCACAGTATGCTCTC +
Preference number: 4 (lower is better)
Translates to: HSMLSTTGYLDHLLRNFRTQHSP*EPQYAL
Trigger: GAGAGCATACTGTGGTTCTCACGGAGAATGCTGTGT...TCTGAAATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGGAGAGCATACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR TCA 90 bp AGAACACTGATACTTGATCATGGGCAGGTCATCTTCTCTGAAAGCTTCTTTGGGGTGCCAAGACCCAGCTaGCCAAATTGTCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: RTLILDHGQVIFSESFFGVPRPS*PNCPSP
Trigger: TGGGCTGGGACAATTTGGTCAGCTGGGTCTTGGCAC...CCCAAAGAAGCTTTCAGAGAAGATGACCTGCCCATGATCAAGTATCAGTGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647261.1
CDS-3UTR TCA 90 bp CACAGTATGCTCTCCACCACAGGCTACTTGGATCACCTTCTCCGGAATTTCAGATCCATCCTCTGCAACTaGACTGAAAGACAGCACAGG +
Preference number: 4 (lower is better)
Translates to: HSMLSTTGYLDHLLRNFRSILCN*TERQHR
Trigger: CCTGTGCTGTCTTTCAGTTCAGTTGCAGAGGATGGA...TCTGAAATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGGAGAGCATACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR GCA 90 bp GATATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTCTTCCGGCTCCCTCATaGCACGGGCAGTACGGGCAG +
Preference number: 4 (lower is better)
Translates to: DILMILTHVVLVGIFIITLPAPS*HGQYGQ
Trigger: CTGCCCGTACTGCCCGTGGCATGAGGGAGCCGGAAG...AGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp CACAGTATGCTCTCCACCACAGGCTACTTGGATCACCTTCTCCGGAATTTCAGAAGACAGGTTTCCCAATaGTCACTTGCTGAGGGACAC +
Preference number: 4 (lower is better)
Translates to: HSMLSTTGYLDHLLRNFRRQVSQ*SLAEGH
Trigger: GTGTCCCTCAGCAAGTGACCATTGGGAAACCTGTCT...TCTGAAATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGGAGAGCATACTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR TCA 90 bp GAGTGCCCGTTATATGCAAGGCATTTAAATTGTCTGACTGGCCATAATCGGGTCATTGCCTCCTTCTGTTaGCACCAGGGTGTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: ECPLYARHLNCLTGHNRVIASFC*HQGVVP
Trigger: AGGAACCACACCCTGGTGTCAACAGAAGGAGGCAAT...GACCCGATTATGGCCAGTCAGACAATTTAAATGCCTTGCATATAACGGGCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR TCA 90 bp AGTGCCAAGACCCAGCTGACCAAATTGTCCCAGCCCAAAGGTATACACAGCATTCCAATGGTCACTTGCTaGGGGACACAGACATTACTT +
Preference number: 4 (lower is better)
Translates to: SAKTQLTKLSQPKGIHSIPMVTC*GTQTLL
Trigger: AAGTAATGTCTGTGTCCCTCAGCAAGTGACCATTGG...AATGCTGTGTATACCTTTGGGCTGGGACAATTTGGTCAGCTGGGTCTTGGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR TCA 90 bp TGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCGTGCCAAGACCCAGCTaGCCAAATTGTCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: WSPMDFISGSGSLLFLTIVPRPS*PNCPSP
Trigger: TGGGCTGGGACAATTTGGTCAGCTGGGTCTTGGCAC...GATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp GAGTGCCCGTTATATGCAAGGCATTTAAATTGTCTGACTGGCCATAATCGGGTCCCAGTGTTCTGCTCCTaGACTACCTTCCTCACAGGT +
Preference number: 4 (lower is better)
Translates to: ECPLYARHLNCLTGHNRVPVFCS*TTFLTG
Trigger: ACCTGTGAGGAAGGTAGTTCAGGAGCAGAACACTGG...GACCCGATTATGGCCAGTCAGACAATTTAAATGCCTTGCATATAACGGGCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR GCA 90 bp ACCCAGCTGACCAAATTGTCCCAGCCCAAAGGTATACACAGCATTCTCCGTGAGGATCCAGCAGACAGCTaGTTAATCTTATGCTCGGAT +
Preference number: 4 (lower is better)
Translates to: TQLTKLSQPKGIHSILREDPADS*LILCSD
Trigger: ATCCGAGCATAAGATTAAGCAGCTGTCTGCTGGATC...CTCACGGAGAATGCTGTGTATACCTTTGGGCTGGGACAATTTGGTCAGCTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR GCA 90 bp CCTTCGGAATTGTCACCCCACATAAAAAGTCTTCCATCCTCTGCAACTGAACTGGGGGTGTTCTGTGATTaGCCAGGAGCTGATTGGGAA +
Preference number: 4 (lower is better)
Translates to: PSELSPHIKSLPSSATELGVFCD*PGADWE
Trigger: TTCCCAATCAGCTCCTGGGCAATCACAGAACACCCC...CAGTTCAGTTGCAGAGGATGGAAGACTTTTTATGTGGGGTGACAATTCCGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR GCA 90 bp GAGTGCCCGTTATATGCAAGGCATTTAAATTGTCTGACTGGCCATAATCGGGTCGGGGTGTTCTGTGATTaGCCAGGAGCTGATTGGGAA +
Preference number: 4 (lower is better)
Translates to: ECPLYARHLNCLTGHNRVGVFCD*PGADWE
Trigger: TTCCCAATCAGCTCCTGGGCAATCACAGAACACCCC...GACCCGATTATGGCCAGTCAGACAATTTAAATGCCTTGCATATAACGGGCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR TCA 90 bp GTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTGTGCCAAGACCCAGCTaGCCAAATTGTCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: VSYGFYLWERLIVILDNLVPRPS*PNCPSP
Trigger: TGGGCTGGGACAATTTGGTCAGCTGGGTCTTGGCAC...AAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp TCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCTTTTTCTTTCTTTTCAGTGCCAAGACCCAGCTaGCCAAATTGTCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: SLYSQMARSSRLAFSFFSVPRPS*PNCPSP
Trigger: TGGGCTGGGACAATTTGGTCAGCTGGGTCTTGGCAC...TGAAAAGAAAGAAAAAGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp GAGTGCCCGTTATATGCAAGGCATTTAAATTGTCTGACTGGCCATAATCGGGTCTTTGCCACACCACGATaGGGAGCAGCAAAAACTACC +
Preference number: 4 (lower is better)
Translates to: ECPLYARHLNCLTGHNRVFATPR*GAAKTT
Trigger: GGTAGTTTTTGCTGCTCCTCATCGTGGTGTGGCAAA...GACCCGATTATGGCCAGTCAGACAATTTAAATGCCTTGCATATAACGGGCACTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR TCA 90 bp GAAAATGCTTCGATAGTCGTAGCTGGCTGCGTCATGAAAATCCCTTGTGACACATTTGCCACACCACGATaGGGAGCAGCAAAAACTACC +
Preference number: 4 (lower is better)
Translates to: ENASIVVAGCVMKIPCDTFATPR*GAAKTT
Trigger: GGTAGTTTTTGCTGCTCCTCATCGTGGTGTGGCAAA...TGTGTCACAAGGGATTTTCATGACGCAGCCAGCTACGACTATCGAAGCATTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646020.1
CDS-3UTR TCA 90 bp CCTTCGGAATTGTCACCCCACATAAAAAGTCTTCCATCCTCTGCAACTGAACTGCCTCTGCAACTGAACTaGAAGACAGCACAGGTCACA +
Preference number: 4 (lower is better)
Translates to: PSELSPHIKSLPSSATELPLQLN*KTAQVT
Trigger: TGTGACCTGTGCTGTCTTTCAGTTCAGTTGCAGAGG...CAGTTCAGTTGCAGAGGATGGAAGACTTTTTATGTGGGGTGACAATTCCGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR GCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATCTTCCGGCTCCCTCATaGCACGGGCAGTACGGGCAG +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYLPAPS*HGQYGQ
Trigger: CTGCCCGTACTGCCCGTGGCATGAGGGAGCCGGAAG...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR GCA 90 bp GGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTTTGATTTATCTTCCGGCTCCCTCATaGCACGGGCAGTACGGGCAG +
Preference number: 4 (lower is better)
Translates to: GFYLWERLIVILDNLLIYLPAPS*HGQYGQ
Trigger: CTGCCCGTACTGCCCGTGGCATGAGGGAGCCGGAAG...ATAAATCAAAAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTCTTCCGGCTCCCTCATaGCACGGGCAGTACGGGCAG +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFLPAPS*HGQYGQ
Trigger: CTGCCCGTACTGCCCGTGGCATGAGGGAGCCGGAAG...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR GCA 90 bp CCTTCGGAATTGTCACCCCACATAAAAAGTCTTCCATCCTCTGCAACTGAACTGGTGAGAACCACAGTATaGTCTCCACCACAGGCTACT +
Preference number: 4 (lower is better)
Translates to: PSELSPHIKSLPSSATELVRTTV*SPPQAT
Trigger: AGTAGCCTGTGGTGGAGAGCATACTGTGGTTCTCAC...CAGTTCAGTTGCAGAGGATGGAAGACTTTTTATGTGGGGTGACAATTCCGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR GCA 90 bp GAGTGCCCGTTATATGCAAGGCATTTAAATTGTCTGACTGGCCATAATCGGGTCGTGAGAACCACAGTATaGTCTCCACCACAGGCTACT +
Preference number: 4 (lower is better)
Translates to: ECPLYARHLNCLTGHNRVVRTTV*SPPQAT
Trigger: AGTAGCCTGTGGTGGAGAGCATACTGTGGTTCTCAC...GACCCGATTATGGCCAGTCAGACAATTTAAATGCCTTGCATATAACGGGCACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR GCA 90 bp GAGTGCCCGTTATATGCAAGGCATTTAAATTGTCTGACTGGCCATAATCGGGTCTCTGGTTCCTCTGGCTaGATGAGGTCCTGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: ECPLYARHLNCLTGHNRVSGSSG*MRSCSD
Trigger: ATCTGAACAGGACCTCATGCAGCCAGAGGAACCAGA...GACCCGATTATGGCCAGTCAGACAATTTAAATGCCTTGCATATAACGGGCACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR CCA 90 bp CTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCCCCCAAGTTCCGCATaGCGAAACTCCGGAGATCAA +
Preference number: 4 (lower is better)
Translates to: LVSYGFYLWERLIVILDNPPSSA*RNSGDQ
Trigger: TTGATCTCCGGAGTTTCGCCATGCGGAACTTGGGGG...ATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000474584.5
ENST00000642739.1
ENST00000646020.1
CDS-3UTR CCA 90 bp GAGTGCCCGTTATATGCAAGGCATTTAAATTGTCTGACTGGCCATAATCGGGTCAGACAGGTTTCCCAATaGTCACTTGCTGAGGGACAC +
Preference number: 4 (lower is better)
Translates to: ECPLYARHLNCLTGHNRVRQVSQ*SLAEGH
Trigger: GTGTCCCTCAGCAAGTGACCATTGGGAAACCTGTCT...GACCCGATTATGGCCAGTCAGACAATTTAAATGCCTTGCATATAACGGGCACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR TCA 90 bp TTCTCAAGAACACTGATACTTGATCATGGGCAGGTCATCTTCTCTGAAAGCTTCATTGCCTCCTTCTGTTaGCACCAGGGTGTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: FSRTLILDHGQVIFSESFIASFC*HQGVVP
Trigger: AGGAACCACACCCTGGTGTCAACAGAAGGAGGCAAT...GAAGCTTTCAGAGAAGATGACCTGCCCATGATCAAGTATCAGTGTTCTTGAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647261.1
CDS-3UTR TCA 90 bp CCAAAATTTACCAGTGCCTCCTATTGTCTTTGGCTCCTTAACACAGCTGCATCAACACAGCATTCTCCGTaGGAACCACAGTATGCTCTC +
Preference number: 4 (lower is better)
Translates to: PKFTSASYCLWLLNTAASTQHSP*EPQYAL
Trigger: GAGAGCATACTGTGGTTCTCACGGAGAATGCTGTGT...TGATGCAGCTGTGTTAAGGAGCCAAAGACAATAGGAGGCACTGGTAAATTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR TCA 90 bp ATCTTCTCTCTGTATTTGTTGGTGGGATATTCTGATGATTCTGACTCATGTGGTGTGCCAAGACCCAGCTaGCCAAATTGTCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: IFSLYLLVGYSDDSDSCGVPRPS*PNCPSP
Trigger: TGGGCTGGGACAATTTGGTCAGCTGGGTCTTGGCAC...ACCACATGAGTCAGAATCATCAGAATATCCCACCAACAAATACAGAGAGAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp CCAAAATTTACCAGTGCCTCCTATTGTCTTTGGCTCCTTAACACAGCTGCATCAGTTCCTCTGGCTGCATaGGGTCCTGTTCAGATAAGA +
Preference number: 4 (lower is better)
Translates to: PKFTSASYCLWLLNTAASVPLAA*GPVQIR
Trigger: TCTTATCTGAACAGGACCTCATGCAGCCAGAGGAAC...TGATGCAGCTGTGTTAAGGAGCCAAAGACAATAGGAGGCACTGGTAAATTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR TCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTCCATCAGTGTCAGCCTaGGGTCCCACCTGGCCTGTG +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFPSVSA*GPTWPV
Trigger: CACAGGCCAGGTGGGACCTCAGGCTGACACTGATGG...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS-3UTR TCA 90 bp TCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTTTGGAGGCAGGATTGTGGTaGGCCAAGATCGCGCCATTG +
Preference number: 4 (lower is better)
Translates to: SYGFYLWERLIVILDNLLEAGLW*AKIAPL
Trigger: CAATGGCGCGATCTTGGCTCACCACAATCCTGCCTC...CAAAAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642739.1
CDS-3UTR TCA 90 bp ATCTTCTCTCTGTATTTGTTGGTGGGATATTCTGATGATTCTGACTCATGTGGTGACAGGCGGATCACCTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: IFSLYLLVGYSDDSDSCGDRRIT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGTGATCCGCCTGTC...ACCACATGAGTCAGAATCATCAGAATATCCCACCAACAAATACAGAGAGAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642739.1
CDS-3UTR GCA 90 bp TTCTCAAGAACACTGATACTTGATCATGGGCAGGTCATCTTCTCTGAAAGCTTCGGGGTGTTCTGTGATTaGCCAGGAGCTGATTGGGAA +
Preference number: 4 (lower is better)
Translates to: FSRTLILDHGQVIFSESFGVFCD*PGADWE
Trigger: TTCCCAATCAGCTCCTGGGCAATCACAGAACACCCC...GAAGCTTTCAGAGAAGATGACCTGCCCATGATCAAGTATCAGTGTTCTTGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647261.1
CDS-3UTR GCA 90 bp ACCAGTGCCTCCTATTGTCTTTGGCTCCTTAACACAGCTGCATCAGTTGCTTTTCCACTGATTTTGCCTTaGCTTCACTCACCTCTGCTT +
Preference number: 4 (lower is better)
Translates to: TSASYCLWLLNTAASVAFPLILP*LHSPLL
Trigger: AAGCAGAGGTGAGTGAAGGCAAGGCAAAATCAGTGG...AAAAGCAACTGATGCAGCTGTGTTAAGGAGCCAAAGACAATAGGAGGCACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR CCA 90 bp CCAAAATTTACCAGTGCCTCCTATTGTCTTTGGCTCCTTAACACAGCTGCATCACCACCACAGGCTACTTaGATCACCTTCTCCGGAATT +
Preference number: 4 (lower is better)
Translates to: PKFTSASYCLWLLNTAASPPQAT*ITFSGI
Trigger: AATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGG...TGATGCAGCTGTGTTAAGGAGCCAAAGACAATAGGAGGCACTGGTAAATTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR CCA 90 bp AGAACACTGATACTTGATCATGGGCAGGTCATCTTCTCTGAAAGCTTCTTTGGGCCACCACAGGCTACTTaGATCACCTTCTCCGGAATT +
Preference number: 4 (lower is better)
Translates to: RTLILDHGQVIFSESFFGPPQAT*ITFSGI
Trigger: AATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGG...CCCAAAGAAGCTTTCAGAGAAGATGACCTGCCCATGATCAAGTATCAGTGTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647261.1
CDS-3UTR CCA 90 bp GAGTGCCCGTTATATGCAAGGCATTTAAATTGTCTGACTGGCCATAATCGGGTCTTCGATAGTCGTAGCTaGCTGCGTCATGAAAATCCC +
Preference number: 4 (lower is better)
Translates to: ECPLYARHLNCLTGHNRVFDSRS*LRHENP
Trigger: GGGATTTTCATGACGCAGCCAGCTACGACTATCGAA...GACCCGATTATGGCCAGTCAGACAATTTAAATGCCTTGCATATAACGGGCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR CCA 90 bp ACCAGTGCCTCCTATTGTCTTTGGCTCCTTAACACAGCTGCATCAGTTGCTTTTACTGGACTGGCATTTTaGACCTCTGCTCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: TSASYCLWLLNTAASVAFTGLAF*TSALSH
Trigger: ATGGGAAAGAGCAGAGGTCCAAAATGCCAGTCCAGT...AAAAGCAACTGATGCAGCTGTGTTAAGGAGCCAAAGACAATAGGAGGCACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR CCA 90 bp ACCAGTGCCTCCTATTGTCTTTGGCTCCTTAACACAGCTGCATCAGTTGCTTTTGCCTCCTATTGTCTTTaGCTCCTTAACACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: TSASYCLWLLNTAASVAFASYCL*LLNTAA
Trigger: TGCAGCTGTGTTAAGGAGCCAAAGACAATAGGAGGC...AAAAGCAACTGATGCAGCTGTGTTAAGGAGCCAAAGACAATAGGAGGCACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR TCA 90 bp CCAAAATTTACCAGTGCCTCCTATTGTCTTTGGCTCCTTAACACAGCTGCATCACACATGTTGGCTTGCTaGTGGCTGACTTTGATCCTA +
Preference number: 4 (lower is better)
Translates to: PKFTSASYCLWLLNTAASHMLAC*WLTLIL
Trigger: TAGGATCAAAGTCAGCCATCAGCAAGCCAACATGTG...TGATGCAGCTGTGTTAAGGAGCCAAAGACAATAGGAGGCACTGGTAAATTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR TCA 90 bp AATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTATTGCCTCCTTCTGTTaGCACCAGGGTGTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: NDLVSYGFYLWERLIVILIASFC*HQGVVP
Trigger: AGGAACCACACCCTGGTGTCAACAGAAGGAGGCAAT...AAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp CCAAAATTTACCAGTGCCTCCTATTGTCTTTGGCTCCTTAACACAGCTGCATCACCAATGGTCACTTGCTaGGGGACACAGACATTACTT +
Preference number: 4 (lower is better)
Translates to: PKFTSASYCLWLLNTAASPMVTC*GTQTLL
Trigger: AAGTAATGTCTGTGTCCCTCAGCAAGTGACCATTGG...TGATGCAGCTGTGTTAAGGAGCCAAAGACAATAGGAGGCACTGGTAAATTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR TCA 90 bp CTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATACACAGCATTCTCCGTaGGAACCACAGTATGCTCTC +
Preference number: 4 (lower is better)
Translates to: LVSYGFYLWERLIVILDNTQHSP*EPQYAL
Trigger: GAGAGCATACTGTGGTTCTCACGGAGAATGCTGTGT...ATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp TTTGGGTTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCTTTTTCTACACAGCATTCTCCGTaGGAACCACAGTATGCTCTC +
Preference number: 4 (lower is better)
Translates to: FGFSLYSQMARSSRLAFSTQHSP*EPQYAL
Trigger: GAGAGCATACTGTGGTTCTCACGGAGAATGCTGTGT...AGAAAAAGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAACCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp CCAAAATTTACCAGTGCCTCCTATTGTCTTTGGCTCCTTAACACAGCTGCATCAGCAAAAACTACCATGTaGCATCCACCACAAGCAACC +
Preference number: 4 (lower is better)
Translates to: PKFTSASYCLWLLNTAASAKTTM*HPPQAT
Trigger: GGTTGCTTGTGGTGGATGTCACATGGTAGTTTTTGC...TGATGCAGCTGTGTTAAGGAGCCAAAGACAATAGGAGGCACTGGTAAATTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR TCA 90 bp TTTGGGTTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCTTTTTCTTTTGCCACACCACGATaGGGAGCAGCAAAAACTACC +
Preference number: 4 (lower is better)
Translates to: FGFSLYSQMARSSRLAFSFATPR*GAAKTT
Trigger: GGTAGTTTTTGCTGCTCCTCATCGTGGTGTGGCAAA...AGAAAAAGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAACCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp TGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTTGCCACACCACGATaGGGAGCAGCAAAAACTACC +
Preference number: 4 (lower is better)
Translates to: WSPMDFISGSGSLLFLTIFATPR*GAAKTT
Trigger: GGTAGTTTTTGCTGCTCCTCATCGTGGTGTGGCAAA...GATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp ACCAGTGCCTCCTATTGTCTTTGGCTCCTTAACACAGCTGCATCAGTTGCTTTTACATCGTGGAAAGACTaGATTGGGGAGAAAACAAGC +
Preference number: 4 (lower is better)
Translates to: TSASYCLWLLNTAASVAFTSWKD*IGEKTS
Trigger: GCTTGTTTTCTCCCCAATTCAGTCTTTCCACGATGT...AAAAGCAACTGATGCAGCTGTGTTAAGGAGCCAAAGACAATAGGAGGCACTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR TCA 90 bp CGTAATGAGTGCCCGTTATATGCAAGGCATTTAAATTGTCTGACTGGCCATAATTCTTCGCCTGTCTCCTaGTACTTCCCCTCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: RNECPLYARHLNCLTGHNSSPVS*YFPSSS
Trigger: GGAAGAAGAGGGGAAGTATCAGGAGACAGGCGAAGA...ATTATGGCCAGTCAGACAATTTAAATGCCTTGCATATAACGGGCACTCATTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR TCA 90 bp GAGTGCCCGTTATATGCAAGGCATTTAAATTGTCTGACTGGCCATAATCGGGTCTTGGGATCTAAGCTCTaGACACAGCTGTCACTTTGT +
Preference number: 4 (lower is better)
Translates to: ECPLYARHLNCLTGHNRVLGSKL*TQLSLC
Trigger: ACAAAGTGACAGCTGTGTTCAGAGCTTAGATCCCAA...GACCCGATTATGGCCAGTCAGACAATTTAAATGCCTTGCATATAACGGGCACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR GCA 90 bp GAGTGCCCGTTATATGCAAGGCATTTAAATTGTCTGACTGGCCATAATCGGGTCGATCCAGCAGACAGCTaGTTAATCTTATGCTCGGAT +
Preference number: 4 (lower is better)
Translates to: ECPLYARHLNCLTGHNRVDPADS*LILCSD
Trigger: ATCCGAGCATAAGATTAAGCAGCTGTCTGCTGGATC...GACCCGATTATGGCCAGTCAGACAATTTAAATGCCTTGCATATAACGGGCACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR GCA 90 bp AGGAACACTTTCATCATCTCCCACAGTTTTCTTCTTGCTTTCCACATTTTCAGCGGGGTGTTCTGTGATTaGCCAGGAGCTGATTGGGAA +
Preference number: 4 (lower is better)
Translates to: RNTFIISHSFLLAFHIFSGVFCD*PGADWE
Trigger: TTCCCAATCAGCTCCTGGGCAATCACAGAACACCCC...GCTGAAAATGTGGAAAGCAAGAAGAAAACTGTGGGAGATGATGAAAGTGTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp GTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTGGGGTGTTCTGTGATTaGCCAGGAGCTGATTGGGAA +
Preference number: 4 (lower is better)
Translates to: VSYGFYLWERLIVILDNLGVFCD*PGADWE
Trigger: TTCCCAATCAGCTCCTGGGCAATCACAGAACACCCC...AAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp TTTGGGTTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCTTTTTCTGTGAGAACCACAGTATaGTCTCCACCACAGGCTACT +
Preference number: 4 (lower is better)
Translates to: FGFSLYSQMARSSRLAFSVRTTV*SPPQAT
Trigger: AGTAGCCTGTGGTGGAGAGCATACTGTGGTTCTCAC...AGAAAAAGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAACCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp ACCAGTGCCTCCTATTGTCTTTGGCTCCTTAACACAGCTGCATCAGTTGCTTTTTACTCCTCTCCATCCTaGCTTTCATTCTCTTCTTCG +
Preference number: 4 (lower is better)
Translates to: TSASYCLWLLNTAASVAFYSSPS*LSFSSS
Trigger: CGAAGAAGAGAATGAAAGGCAGGATGGAGAGGAGTA...AAAAGCAACTGATGCAGCTGTGTTAAGGAGCCAAAGACAATAGGAGGCACTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR CCA 90 bp ATGTATCCTTTTGGGTTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGAGACAGGTTTCCCAATaGTCACTTGCTGAGGGACAC +
Preference number: 4 (lower is better)
Translates to: MYPFGFSLYSQMARSSRLRQVSQ*SLAEGH
Trigger: GTGTCCCTCAGCAAGTGACCATTGGGAAACCTGTCT...CAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAACCCAAAAGGATACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp TTTGGGTTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCTTTTTCTAGACAGGTTTCCCAATaGTCACTTGCTGAGGGACAC +
Preference number: 4 (lower is better)
Translates to: FGFSLYSQMARSSRLAFSRQVSQ*SLAEGH
Trigger: GTGTCCCTCAGCAAGTGACCATTGGGAAACCTGTCT...AGAAAAAGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAACCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp CTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATAGACAGGTTTCCCAATaGTCACTTGCTGAGGGACAC +
Preference number: 4 (lower is better)
Translates to: LVSYGFYLWERLIVILDNRQVSQ*SLAEGH
Trigger: GTGTCCCTCAGCAAGTGACCATTGGGAAACCTGTCT...ATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp TTCTCAAGAACACTGATACTTGATCATGGGCAGGTCATCTTCTCTGAAAGCTTCAGACAGGTTTCCCAATaGTCACTTGCTGAGGGACAC +
Preference number: 4 (lower is better)
Translates to: FSRTLILDHGQVIFSESFRQVSQ*SLAEGH
Trigger: GTGTCCCTCAGCAAGTGACCATTGGGAAACCTGTCT...GAAGCTTTCAGAGAAGATGACCTGCCCATGATCAAGTATCAGTGTTCTTGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647261.1
CDS-3UTR CCA 90 bp TGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCCCACCACAGGCTACTTaGATCACCTTCTCCGGAATT +
Preference number: 4 (lower is better)
Translates to: WSPMDFISGSGSLLFLTIPPQAT*ITFSGI
Trigger: AATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGG...GATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp TTTGGGTTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCTTTTTCTCCACCACAGGCTACTTaGATCACCTTCTCCGGAATT +
Preference number: 4 (lower is better)
Translates to: FGFSLYSQMARSSRLAFSPPQAT*ITFSGI
Trigger: AATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGG...AGAAAAAGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAACCCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp CCAAAATTTACCAGTGCCTCCTATTGTCTTTGGCTCCTTAACACAGCTGCATCAATAATCTGGTTCCTCTaGCTGCATGAGGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: PKFTSASYCLWLLNTAASIIWFL*LHEVLF
Trigger: GAACAGGACCTCATGCAGCCAGAGGAACCAGATTAT...TGATGCAGCTGTGTTAAGGAGCCAAAGACAATAGGAGGCACTGGTAAATTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
3UTR CAA 72 bp TTCAAAAAGAAAAGTGCCAAGACCCAGCTGACCAAATaGTCCCAGCCCAAAGGTATACACAGCATTCTCCGT +
Preference number: 4 (lower is better)
Translates to: FKKKSAKTQLTK*SQPKGIHSILR
Trigger: ACGGAGAATGCTGTGTATACCTTTGGGCTGGGACAATTTGGTCAGCTGGGTCTTGGCACTTTTCTTTTTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR TCA 90 bp TGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCCACATGTTGGCTTGCTaGTGGCTGACTTTGATCCTA +
Preference number: 4 (lower is better)
Translates to: WSPMDFISGSGSLLFLTIHMLAC*WLTLIL
Trigger: TAGGATCAAAGTCAGCCATCAGCAAGCCAACATGTG...GATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp TTCTCAAGAACACTGATACTTGATCATGGGCAGGTCATCTTCTCTGAAAGCTTCCACATGTTGGCTTGCTaGTGGCTGACTTTGATCCTA +
Preference number: 4 (lower is better)
Translates to: FSRTLILDHGQVIFSESFHMLAC*WLTLIL
Trigger: TAGGATCAAAGTCAGCCATCAGCAAGCCAACATGTG...GAAGCTTTCAGAGAAGATGACCTGCCCATGATCAAGTATCAGTGTTCTTGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647261.1
CDS-3UTR TCA 90 bp ATCTTCTCTCTGTATTTGTTGGTGGGATATTCTGATGATTCTGACTCATGTGGTATTGCCTCCTTCTGTTaGCACCAGGGTGTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: IFSLYLLVGYSDDSDSCGIASFC*HQGVVP
Trigger: AGGAACCACACCCTGGTGTCAACAGAAGGAGGCAAT...ACCACATGAGTCAGAATCATCAGAATATCCCACCAACAAATACAGAGAGAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp TCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTTTGATTGCCTCCTTCTGTTaGCACCAGGGTGTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: SYGFYLWERLIVILDNLLIASFC*HQGVVP
Trigger: AGGAACCACACCCTGGTGTCAACAGAAGGAGGCAAT...CAAAAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp TGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCCCAATGGTCACTTGCTaGGGGACACAGACATTACTT +
Preference number: 4 (lower is better)
Translates to: WSPMDFISGSGSLLFLTIPMVTC*GTQTLL
Trigger: AAGTAATGTCTGTGTCCCTCAGCAAGTGACCATTGG...GATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp TTTGGGTTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCTTTTTCTCCAATGGTCACTTGCTaGGGGACACAGACATTACTT +
Preference number: 4 (lower is better)
Translates to: FGFSLYSQMARSSRLAFSPMVTC*GTQTLL
Trigger: AAGTAATGTCTGTGTCCCTCAGCAAGTGACCATTGG...AGAAAAAGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAACCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp AATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTACACAGCATTCTCCGTaGGAACCACAGTATGCTCTC +
Preference number: 4 (lower is better)
Translates to: NDLVSYGFYLWERLIVILTQHSP*EPQYAL
Trigger: GAGAGCATACTGTGGTTCTCACGGAGAATGCTGTGT...AAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp GATACATTCTCAAGAACACTGATACTTGATCATGGGCAGGTCATCTTCTCTGAAACACAGCATTCTCCGTaGGAACCACAGTATGCTCTC +
Preference number: 4 (lower is better)
Translates to: DTFSRTLILDHGQVIFSETQHSP*EPQYAL
Trigger: GAGAGCATACTGTGGTTCTCACGGAGAATGCTGTGT...TTCAGAGAAGATGACCTGCCCATGATCAAGTATCAGTGTTCTTGAGAATGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647261.1
CDS-3UTR TCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATGTGCCAAGACCCAGCTaGCCAAATTGTCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYVPRPS*PNCPSP
Trigger: TGGGCTGGGACAATTTGGTCAGCTGGGTCTTGGCAC...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR TCA 90 bp TTTCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGTGCCAAGACCCAGCTaGCCAAATTGTCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: FLGFLMNCYLHHQACILLVPRPS*PNCPSP
Trigger: TGGGCTGGGACAATTTGGTCAGCTGGGTCTTGGCAC...CAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp GAAATTACAGAACAGTCAGTGAATACATTGAGGGCATATAACACATACCAGAAAGTGCCAAGACCCAGCTaGCCAAATTGTCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: EITEQSVNTLRAYNTYQKVPRPS*PNCPSP
Trigger: TGGGCTGGGACAATTTGGTCAGCTGGGTCTTGGCAC...TTTCTGGTATGTGTTATATGCCCTCAATGTATTCACTGACTGTTCTGTAATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR TCA 90 bp TGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCGCAAAAACTACCATGTaGCATCCACCACAAGCAACC +
Preference number: 4 (lower is better)
Translates to: WSPMDFISGSGSLLFLTIAKTTM*HPPQAT
Trigger: GGTTGCTTGTGGTGGATGTCACATGGTAGTTTTTGC...GATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp ATGTATCCTTTTGGGTTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCAAAAACTACCATGTaGCATCCACCACAAGCAACC +
Preference number: 4 (lower is better)
Translates to: MYPFGFSLYSQMARSSRLAKTTM*HPPQAT
Trigger: GGTTGCTTGTGGTGGATGTCACATGGTAGTTTTTGC...CAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAACCCAAAAGGATACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp TCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCTTTTTCTTTCTTTTCAGTTCCTCTGGCTGCATaGGGTCCTGTTCAGATAAGA +
Preference number: 4 (lower is better)
Translates to: SLYSQMARSSRLAFSFFSVPLAA*GPVQIR
Trigger: TCTTATCTGAACAGGACCTCATGCAGCCAGAGGAAC...TGAAAAGAAAGAAAAAGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp ATGTATCCTTTTGGGTTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGTGGAATTCAGGCTCATaGTGTGTGTCTGGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: MYPFGFSLYSQMARSSRLWNSGS*CVSGSS
Trigger: AGAGGAACCAGACACACATCATGAGCCTGAATTCCA...CAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAACCCAAAAGGATACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474584.5
CDS-3UTR TCA 90 bp ACCAGTGCCTCCTATTGTCTTTGGCTCCTTAACACAGCTGCATCAGTTGCTTTTCTCTACTTCCTCATCTaGAAATGCTTCGATAGTCGT +
Preference number: 4 (lower is better)
Translates to: TSASYCLWLLNTAASVAFLYFLI*KCFDSR
Trigger: ACGACTATCGAAGCATTTTCAGATGAGGAAGTAGAG...AAAAGCAACTGATGCAGCTGTGTTAAGGAGCCAAAGACAATAGGAGGCACTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR TCA 90 bp AGAACACTGATACTTGATCATGGGCAGGTCATCTTCTCTGAAAGCTTCTTTGGGCATTCTCAAGAACACTaGTACTTGATCATGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RTLILDHGQVIFSESFFGHSQEH*YLIMGR
Trigger: CCTGCCCATGATCAAGTATCAGTGTTCTTGAGAATG...CCCAAAGAAGCTTTCAGAGAAGATGACCTGCCCATGATCAAGTATCAGTGTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647261.1
CDS-3UTR GCA 90 bp CCATCCTCTGCAACTGAACTGAAAGACAGCACAGGTCACATTAGACACCTGCAGGACCCCAGTTGTTACTaGCAAACATGTAAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: PSSATELKDSTGHIRHLQDPSCY*QTCKVY
Trigger: ATAAACTTTACATGTTTGGCAGTAACAACTGGGGTC...CTGCAGGTGTCTAATGTGACCTGTGCTGTCTTTCAGTTCAGTTGCAGAGGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR GCA 90 bp TTTCAAAAAGAAAAGTGCCAAGACCCAGCTGACCAAATTGTCCCAGCCCAAAGGCAGTTGCATATACATTaGCTCCTTCTGTTGACACCA +
Preference number: 4 (lower is better)
Translates to: FQKEKCQDPADQIVPAQRQLHIH*LLLLTP
Trigger: TGGTGTCAACAGAAGGAGGCAATGTATATGCAACTG...CCTTTGGGCTGGGACAATTTGGTCAGCTGGGTCTTGGCACTTTTCTTTTTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR GCA 90 bp TTTAAAATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTAGGGGTGTTCTGTGATTaGCCAGGAGCTGATTGGGAA +
Preference number: 4 (lower is better)
Translates to: FKMIWSPMDFISGSGSLLGVFCD*PGADWE
Trigger: TTCCCAATCAGCTCCTGGGCAATCACAGAACACCCC...TAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp GTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTGTGAGAACCACAGTATaGTCTCCACCACAGGCTACT +
Preference number: 4 (lower is better)
Translates to: VSYGFYLWERLIVILDNLVRTTV*SPPQAT
Trigger: AGTAGCCTGTGGTGGAGAGCATACTGTGGTTCTCAC...AAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp GATACATTCTCAAGAACACTGATACTTGATCATGGGCAGGTCATCTTCTCTGAAGTGAGAACCACAGTATaGTCTCCACCACAGGCTACT +
Preference number: 4 (lower is better)
Translates to: DTFSRTLILDHGQVIFSEVRTTV*SPPQAT
Trigger: AGTAGCCTGTGGTGGAGAGCATACTGTGGTTCTCAC...TTCAGAGAAGATGACCTGCCCATGATCAAGTATCAGTGTTCTTGAGAATGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647261.1
CDS-3UTR GCA 90 bp TACTTGGATCACCTTCTCCGGAATTTCAGACACCAGCTGGGGTGTTCTGTGATTTTTCAAAAAGAAAAGTaGCAAGACCCAGCTGACCAA +
Preference number: 4 (lower is better)
Translates to: YLDHLLRNFRHQLGCSVIFQKEK*QDPADQ
Trigger: TTGGTCAGCTGGGTCTTGGCACTTTTCTTTTTGAAA...AATCACAGAACACCCCAGCTGGTGTCTGAAATTCCGGAGAAGGTGATCCAAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR CCA 90 bp AGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGTTTCCCCCAAGTTCCGCATaGCGAAACTCCGGAGATCAA +
Preference number: 4 (lower is better)
Translates to: RISNELLSASSSMYPFGFPPSSA*RNSGDQ
Trigger: TTGATCTCCGGAGTTTCGCCATGCGGAACTTGGGGG...AAACCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474584.5
ENST00000646020.1
CDS-3UTR CCA 90 bp AATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTAGACAGGTTTCCCAATaGTCACTTGCTGAGGGACAC +
Preference number: 4 (lower is better)
Translates to: NDLVSYGFYLWERLIVILRQVSQ*SLAEGH
Trigger: GTGTCCCTCAGCAAGTGACCATTGGGAAACCTGTCT...AAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp AATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTCCACCACAGGCTACTTaGATCACCTTCTCCGGAATT +
Preference number: 4 (lower is better)
Translates to: NDLVSYGFYLWERLIVILPPQAT*ITFSGI
Trigger: AATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGG...AAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp AAAATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCCCACCACAGGCTACTTaGATCACCTTCTCCGGAATT +
Preference number: 4 (lower is better)
Translates to: KMIWSPMDFISGSGSLLFPPQAT*ITFSGI
Trigger: AATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGG...GAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp ATAAAAAGTCTTCCATCCTCTGCAACTGAACTGAAAGACAGCACAGGTCACATTCCACCACAGGCTACTTaGATCACCTTCTCCGGAATT +
Preference number: 4 (lower is better)
Translates to: IKSLPSSATELKDSTGHIPPQAT*ITFSGI
Trigger: AATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGG...AATGTGACCTGTGCTGTCTTTCAGTTCAGTTGCAGAGGATGGAAGACTTTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR CCA 90 bp GTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTCCACCACAGGCTACTTaGATCACCTTCTCCGGAATT +
Preference number: 4 (lower is better)
Translates to: VSYGFYLWERLIVILDNLPPQAT*ITFSGI
Trigger: AATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGG...AAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp GAGTGCCCGTTATATGCAAGGCATTTAAATTGTCTGACTGGCCATAATCGGGTCAGTCCTAATTTTCCGTaGCGACCATCTCCAAAAGTA +
Preference number: 4 (lower is better)
Translates to: ECPLYARHLNCLTGHNRVSPNFP*RPSPKV
Trigger: TACTTTTGGAGATGGTCGCCACGGAAAATTAGGACT...GACCCGATTATGGCCAGTCAGACAATTTAAATGCCTTGCATATAACGGGCACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR CCA 90 bp TCATCACTATCATCGTTTTCAGTAAGAGCTGTATCCTGCGTCAGTTCCCCAATTTTCGATAGTCGTAGCTaGCTGCGTCATGAAAATCCC +
Preference number: 4 (lower is better)
Translates to: SSLSSFSVRAVSCVSSPIFDSRS*LRHENP
Trigger: GGGATTTTCATGACGCAGCCAGCTACGACTATCGAA...AATTGGGGAACTGACGCAGGATACAGCTCTTACTGAAAACGATGATAGTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000646020.1
CDS-3UTR CCA 90 bp TCTTCTCTCTGTATTTGTTGGTGGGATATTCTGATGATTCTGACTCATGTGGTTCATGTCTGGTTCCTCTaGCTGCATGAGGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: SSLCICWWDILMILTHVVHVWFL*LHEVLF
Trigger: GAACAGGACCTCATGCAGCCAGAGGAACCAGACATG...AACCACATGAGTCAGAATCATCAGAATATCCCACCAACAAATACAGAGAGAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646020.1
CDS-3UTR TCA 90 bp GTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTGATCCTAATCCTAACTaGCCCCAGTTGTTACTGCCA +
Preference number: 4 (lower is better)
Translates to: VSYGFYLWERLIVILDNLDPNPN*PQLLLP
Trigger: TGGCAGTAACAACTGGGGTCAGTTAGGATTAGGATC...AAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp AGGAACACTTTCATCATCTCCCACAGTTTTCTTCTTGCTTTCCACATTTTCAGCGATCCTAATCCTAACTaGCCCCAGTTGTTACTGCCA +
Preference number: 4 (lower is better)
Translates to: RNTFIISHSFLLAFHIFSDPNPN*PQLLLP
Trigger: TGGCAGTAACAACTGGGGTCAGTTAGGATTAGGATC...GCTGAAAATGTGGAAAGCAAGAAGAAAACTGTGGGAGATGATGAAAGTGTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp TTTAAACCAATTTGCCCTTCGGAATTGTCACCCCACATAAAAAGTCTTCCATCCCACATGTTGGCTTGCTaGTGGCTGACTTTGATCCTA +
Preference number: 4 (lower is better)
Translates to: FKPICPSELSPHIKSLPSHMLAC*WLTLIL
Trigger: TAGGATCAAAGTCAGCCATCAGCAAGCCAACATGTG...GGATGGAAGACTTTTTATGTGGGGTGACAATTCCGAAGGGCAAATTGGTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR TCA 90 bp ATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTTTATTGCCTCCTTCTGTTaGCACCAGGGTGTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: ILMILTHVVLVGIFIITFIASFC*HQGVVP
Trigger: AGGAACCACACCCTGGTGTCAACAGAAGGAGGCAAT...AAAAGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp GGAACACTTTCATCATCTCCCACAGTTTTCTTCTTGCTTTCCACATTTTCAGCACCAATGGTCACTTGCTaGGGGACACAGACATTACTT +
Preference number: 4 (lower is better)
Translates to: GTLSSSPTVFFLLSTFSAPMVTC*GTQTLL
Trigger: AAGTAATGTCTGTGTCCCTCAGCAAGTGACCATTGG...TGCTGAAAATGTGGAAAGCAAGAAGAAAACTGTGGGAGATGATGAAAGTGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp AAAATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCCCAATGGTCACTTGCTaGGGGACACAGACATTACTT +
Preference number: 4 (lower is better)
Translates to: KMIWSPMDFISGSGSLLFPMVTC*GTQTLL
Trigger: AAGTAATGTCTGTGTCCCTCAGCAAGTGACCATTGG...GAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp GATACATTCTCAAGAACACTGATACTTGATCATGGGCAGGTCATCTTCTCTGAACCAATGGTCACTTGCTaGGGGACACAGACATTACTT +
Preference number: 4 (lower is better)
Translates to: DTFSRTLILDHGQVIFSEPMVTC*GTQTLL
Trigger: AAGTAATGTCTGTGTCCCTCAGCAAGTGACCATTGG...TTCAGAGAAGATGACCTGCCCATGATCAAGTATCAGTGTTCTTGAGAATGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647261.1
CDS-3UTR TCA 90 bp TTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCTTTTTCTTTCTTTACACAGCATTCTCCGTaGGAACCACAGTATGCTCTC +
Preference number: 4 (lower is better)
Translates to: FSLYSQMARSSRLAFSFFTQHSP*EPQYAL
Trigger: GAGAGCATACTGTGGTTCTCACGGAGAATGCTGTGT...AAAGAAAGAAAAAGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp GGAACACTTTCATCATCTCCCACAGTTTTCTTCTTGCTTTCCACATTTTCAGCAGCAAAAACTACCATGTaGCATCCACCACAAGCAACC +
Preference number: 4 (lower is better)
Translates to: GTLSSSPTVFFLLSTFSAAKTTM*HPPQAT
Trigger: GGTTGCTTGTGGTGGATGTCACATGGTAGTTTTTGC...TGCTGAAAATGTGGAAAGCAAGAAGAAAACTGTGGGAGATGATGAAAGTGTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp GTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTGCAAAAACTACCATGTaGCATCCACCACAAGCAACC +
Preference number: 4 (lower is better)
Translates to: VSYGFYLWERLIVILDNLAKTTM*HPPQAT
Trigger: GGTTGCTTGTGGTGGATGTCACATGGTAGTTTTTGC...AAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp ATCTTCTCTCTGTATTTGTTGGTGGGATATTCTGATGATTCTGACTCATGTGGTTTTGCCACACCACGATaGGGAGCAGCAAAAACTACC +
Preference number: 4 (lower is better)
Translates to: IFSLYLLVGYSDDSDSCGFATPR*GAAKTT
Trigger: GGTAGTTTTTGCTGCTCCTCATCGTGGTGTGGCAAA...ACCACATGAGTCAGAATCATCAGAATATCCCACCAACAAATACAGAGAGAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp TGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCACATCGTGGAAAGACTaGATTGGGGAGAAAACAAGC +
Preference number: 4 (lower is better)
Translates to: WSPMDFISGSGSLLFLTITSWKD*IGEKTS
Trigger: GCTTGTTTTCTCCCCAATTCAGTCTTTCCACGATGT...GATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp TCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGGTTCCTCTGGCTGCATaGGGTCCTGTTCAGATAAGA +
Preference number: 4 (lower is better)
Translates to: SRISNELLSASSSMYPFGVPLAA*GPVQIR
Trigger: TCTTATCTGAACAGGACCTCATGCAGCCAGAGGAAC...CCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp TTTAAAATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTAGTTCCTCTGGCTGCATaGGGTCCTGTTCAGATAAGA +
Preference number: 4 (lower is better)
Translates to: FKMIWSPMDFISGSGSLLVPLAA*GPVQIR
Trigger: TCTTATCTGAACAGGACCTCATGCAGCCAGAGGAAC...TAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp GAGTGCCCGTTATATGCAAGGCATTTAAATTGTCTGACTGGCCATAATCGGGTCTGGAATTCAGGCTCATaGTGTGTGTCATGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: ECPLYARHLNCLTGHNRVWNSGS*CVSCLR
Trigger: TCTTAAACATGACACACATCATGAGCCTGAATTCCA...GACCCGATTATGGCCAGTCAGACAATTTAAATGCCTTGCATATAACGGGCACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR GCA 90 bp ATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTTTGGGGTGTTCTGTGATTaGCCAGGAGCTGATTGGGAA +
Preference number: 4 (lower is better)
Translates to: ILMILTHVVLVGIFIITFGVFCD*PGADWE
Trigger: TTCCCAATCAGCTCCTGGGCAATCACAGAACACCCC...AAAAGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp ATCTTCTCTCTGTATTTGTTGGTGGGATATTCTGATGATTCTGACTCATGTGGTGTGAGAACCACAGTATaGTCTCCACCACAGGCTACT +
Preference number: 4 (lower is better)
Translates to: IFSLYLLVGYSDDSDSCGVRTTV*SPPQAT
Trigger: AGTAGCCTGTGGTGGAGAGCATACTGTGGTTCTCAC...ACCACATGAGTCAGAATCATCAGAATATCCCACCAACAAATACAGAGAGAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp TTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCTTTTTCTTTCTTTTGTGAGAACCACAGTATaGTCTCCACCACAGGCTACT +
Preference number: 4 (lower is better)
Translates to: FHCTHKWPVPLGWLFLSFVRTTV*SPPQAT
Trigger: AGTAGCCTGTGGTGGAGAGCATACTGTGGTTCTCAC...AAAAGAAAGAAAAAGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp CTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATGCTGATAGAGTCCTCTaGAGTACATTTCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: LVSYGFYLWERLIVILDNADRVL*STFPEV
Trigger: AACCTCAGGAAATGTACTGCAGAGGACTCTATCAGC...ATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp TCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGTCTGGTTCCTCTGGCTaGATGAGGTCCTGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: SRISNELLSASSSMYPFGSGSSG*MRSCSD
Trigger: ATCTGAACAGGACCTCATGCAGCCAGAGGAACCAGA...CCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp GATATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTCTGGTTCCTCTGGCTaGATGAGGTCCTGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: DILMILTHVVLVGIFIITSGSSG*MRSCSD
Trigger: ATCTGAACAGGACCTCATGCAGCCAGAGGAACCAGA...AGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAATATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp AATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTTTGAACAGAAAAATCTaGTGGGCATGGTGGCTCACG +
Preference number: 4 (lower is better)
Translates to: NDLVSYGFYLWERLIVILLNRKI*WAWWLT
Trigger: CGTGAGCCACCATGCCCAGCAGATTTTTCTGTTCAA...AAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000642739.1
CDS-3UTR GCA 90 bp CGTAATGAGTGCCCGTTATATGCAAGGCATTTAAATTGTCTGACTGGCCATAATGGCATTTTGGACCTCTaGTCTTTCCCATTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: RNECPLYARHLNCLTGHNGILDL*SFPFPC
Trigger: ACAGGGAAATGGGAAAGAGCAGAGGTCCAAAATGCC...ATTATGGCCAGTCAGACAATTTAAATGCCTTGCATATAACGGGCACTCATTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR GCA 90 bp GAGTGCCCGTTATATGCAAGGCATTTAAATTGTCTGACTGGCCATAATCGGGTCAGAGTTAGAAGGGACTaGAGTTATCACATCATCTCA +
Preference number: 4 (lower is better)
Translates to: ECPLYARHLNCLTGHNRVRVRRD*SYHIIS
Trigger: TGAGATGATGTGATAACTGCAGTCCCTTCTAACTCT...GACCCGATTATGGCCAGTCAGACAATTTAAATGCCTTGCATATAACGGGCACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR CCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATCCCCCAAGTTCCGCATaGCGAAACTCCGGAGATCAA +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYPPSSA*RNSGDQ
Trigger: TTGATCTCCGGAGTTTCGCCATGCGGAACTTGGGGG...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000339363.7
ENST00000642395.2
CDS-3UTR CCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTCCCCCAAGTTCCGCATaGCGAAACTCCGGAGATCAA +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFPPSSA*RNSGDQ
Trigger: TTGATCTCCGGAGTTTCGCCATGCGGAACTTGGGGG...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000339363.7
ENST00000642395.2
CDS-3UTR CCA 90 bp TTTAAAATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTAAGACAGGTTTCCCAATaGTCACTTGCTGAGGGACAC +
Preference number: 4 (lower is better)
Translates to: FKMIWSPMDFISGSGSLLRQVSQ*SLAEGH
Trigger: GTGTCCCTCAGCAAGTGACCATTGGGAAACCTGTCT...TAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp ACCAGTGCCTCCTATTGTCTTTGGCTCCTTAACACAGCTGCATCAGTTGCTTTTGATAAGACACTCTCTTaGAGGTTTCTCTCAGAACAT +
Preference number: 4 (lower is better)
Translates to: TSASYCLWLLNTAASVAFDKTLS*RFLSEH
Trigger: ATGTTCTGAGAGAAACCTCCAAGAGAGTGTCTTATC...AAAAGCAACTGATGCAGCTGTGTTAAGGAGCCAAAGACAATAGGAGGCACTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR CCA 90 bp GTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTATAATCTGGTTCCTCTaGCTGCATGAGGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: VSYGFYLWERLIVILDNLIIWFL*LHEVLF
Trigger: GAACAGGACCTCATGCAGCCAGAGGAACCAGATTAT...AAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
CDS-3UTR CCA 90 bp AAAATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCATAATCTGGTTCCTCTaGCTGCATGAGGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: KMIWSPMDFISGSGSLLFIIWFL*LHEVLF
Trigger: GAACAGGACCTCATGCAGCCAGAGGAACCAGATTAT...GAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
CDS-3UTR CCA 90 bp GGAACACTTTCATCATCTCCCACAGTTTTCTTCTTGCTTTCCACATTTTCAGCACATTGTACTCACAAATaGCCCGTTCCTCTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GTLSSSPTVFFLLSTFSAHCTHK*PVPLGW
Trigger: CCAACCTAGAGGAACGGGCCATTTGTGAGTACAATG...TGCTGAAAATGTGGAAAGCAAGAAGAAAACTGTGGGAGATGATGAAAGTGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp AATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTCATTGTACTCACAAATaGCCCGTTCCTCTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: NDLVSYGFYLWERLIVILHCTHK*PVPLGW
Trigger: CCAACCTAGAGGAACGGGCCATTTGTGAGTACAATG...AAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp TATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTTTGTGTCTGGTTCCTCTaGCTGCATGAGGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: YSDDSDSCGSGRHLYYHFCVWFL*LHEVLF
Trigger: GAACAGGACCTCATGCAGCCAGAGGAACCAGACACA...AAAGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474584.5
CDS-3UTR CCA 90 bp ATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTTTGTGAAACCGCATGTCTaGTTCCTCTGGCTGCATGAG +
Preference number: 4 (lower is better)
Translates to: ILMILTHVVLVGIFIITFVKPHV*FLWLHE
Trigger: CTCATGCAGCCAGAGGAACCAGACATGCGGTTTCAC...AAAAGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646020.1
CDS-3UTR TCA 90 bp TCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTTTGGATCCTAATCCTAACTaGCCCCAGTTGTTACTGCCA +
Preference number: 4 (lower is better)
Translates to: SYGFYLWERLIVILDNLLDPNPN*PQLLLP
Trigger: TGGCAGTAACAACTGGGGTCAGTTAGGATTAGGATC...CAAAAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp TTTAAAATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTACACATGTTGGCTTGCTaGTGGCTGACTTTGATCCTA +
Preference number: 4 (lower is better)
Translates to: FKMIWSPMDFISGSGSLLHMLAC*WLTLIL
Trigger: TAGGATCAAAGTCAGCCATCAGCAAGCCAACATGTG...TAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATATTGCCTCCTTCTGTTaGCACCAGGGTGTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYIASFC*HQGVVP
Trigger: AGGAACCACACCCTGGTGTCAACAGAAGGAGGCAAT...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR TCA 90 bp GGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTTTGATTTATATTGCCTCCTTCTGTTaGCACCAGGGTGTGGTTCCT +
Preference number: 4 (lower is better)
Translates to: GFYLWERLIVILDNLLIYIASFC*HQGVVP
Trigger: AGGAACCACACCCTGGTGTCAACAGAAGGAGGCAAT...ATAAATCAAAAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp ATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTTTACACAGCATTCTCCGTaGGAACCACAGTATGCTCTC +
Preference number: 4 (lower is better)
Translates to: ILMILTHVVLVGIFIITFTQHSP*EPQYAL
Trigger: GAGAGCATACTGTGGTTCTCACGGAGAATGCTGTGT...AAAAGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp CACTGTTTTCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCTTTGCCACACCACGATaGGGAGCAGCAAAAACTACC +
Preference number: 4 (lower is better)
Translates to: HCFLGFLMNCYLHHQACIFATPR*GAAKTT
Trigger: GGTAGTTTTTGCTGCTCCTCATCGTGGTGTGGCAAA...GATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGAAAACAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp AAAATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCACATCGTGGAAAGACTaGATTGGGGAGAAAACAAGC +
Preference number: 4 (lower is better)
Translates to: KMIWSPMDFISGSGSLLFTSWKD*IGEKTS
Trigger: GCTTGTTTTCTCCCCAATTCAGTCTTTCCACGATGT...GAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp AATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTACATCGTGGAAAGACTaGATTGGGGAGAAAACAAGC +
Preference number: 4 (lower is better)
Translates to: NDLVSYGFYLWERLIVILTSWKD*IGEKTS
Trigger: GCTTGTTTTCTCCCCAATTCAGTCTTTCCACGATGT...AAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp AGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGTTTGTTCCTCTGGCTGCATaGGGTCCTGTTCAGATAAGA +
Preference number: 4 (lower is better)
Translates to: RISNELLSASSSMYPFGFVPLAA*GPVQIR
Trigger: TCTTATCTGAACAGGACCTCATGCAGCCAGAGGAAC...AAACCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp ACCAGTGCCTCCTATTGTCTTTGGCTCCTTAACACAGCTGCATCAGTTGCTTTTAAGGCTTTCTACAGTTaGAGAATTATCTATCTCTGC +
Preference number: 4 (lower is better)
Translates to: TSASYCLWLLNTAASVAFKAFYS*RIIYLC
Trigger: GCAGAGATAGATAATTCTTCAACTGTAGAAAGCCTT...AAAAGCAACTGATGCAGCTGTGTTAAGGAGCCAAAGACAATAGGAGGCACTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR TCA 90 bp CCAAAATTTACCAGTGCCTCCTATTGTCTTTGGCTCCTTAACACAGCTGCATCACATGAAAATCCCTTGTaGCACATGTTGTTTACATGC +
Preference number: 4 (lower is better)
Translates to: PKFTSASYCLWLLNTAASHENPL*HMLFTC
Trigger: GCATGTAAACAACATGTGTCACAAGGGATTTTCATG...TGATGCAGCTGTGTTAAGGAGCCAAAGACAATAGGAGGCACTGGTAAATTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR TCA 90 bp TCCTCATCTGAAAATGCTTCGATAGTCGTAGCTGGCTGCGTCATGAAAATCCCTTTCAATAGTTTCAGCTaGGCTATCATCATTGGTTCT +
Preference number: 4 (lower is better)
Translates to: SSSENASIVVAGCVMKIPFNSFS*AIIIGS
Trigger: AGAACCAATGATGATAGCTCAGCTGAAACTATTGAA...AGGGATTTTCATGACGCAGCCAGCTACGACTATCGAAGCATTTTCAGATGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646020.1
CDS-3UTR GCA 90 bp TTTGGGTTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCTTTTTCTCAGTTGCATATACATTaGCTCCTTCTGTTGACACCA +
Preference number: 4 (lower is better)
Translates to: FGFSLYSQMARSSRLAFSQLHIH*LLLLTP
Trigger: TGGTGTCAACAGAAGGAGGCAATGTATATGCAACTG...AGAAAAAGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAACCCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp TTCTCAAGAACACTGATACTTGATCATGGGCAGGTCATCTTCTCTGAAAGCTTCCAGTTGCATATACATTaGCTCCTTCTGTTGACACCA +
Preference number: 4 (lower is better)
Translates to: FSRTLILDHGQVIFSESFQLHIH*LLLLTP
Trigger: TGGTGTCAACAGAAGGAGGCAATGTATATGCAACTG...GAAGCTTTCAGAGAAGATGACCTGCCCATGATCAAGTATCAGTGTTCTTGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647261.1
CDS-3UTR GCA 90 bp GGAACACTTTCATCATCTCCCACAGTTTTCTTCTTGCTTTCCACATTTTCAGCAGATCCAGCAGACAGCTaGTTAATCTTATGCTCGGAT +
Preference number: 4 (lower is better)
Translates to: GTLSSSPTVFFLLSTFSADPADS*LILCSD
Trigger: ATCCGAGCATAAGATTAAGCAGCTGTCTGCTGGATC...TGCTGAAAATGTGGAAAGCAAGAAGAAAACTGTGGGAGATGATGAAAGTGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp TCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCTTTTTCTTTCTTTTCAGATCCAGCAGACAGCTaGTTAATCTTATGCTCGGAT +
Preference number: 4 (lower is better)
Translates to: SLYSQMARSSRLAFSFFSDPADS*LILCSD
Trigger: ATCCGAGCATAAGATTAAGCAGCTGTCTGCTGGATC...TGAAAAGAAAGAAAAAGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp GATACATTCTCAAGAACACTGATACTTGATCATGGGCAGGTCATCTTCTCTGAAGATCCAGCAGACAGCTaGTTAATCTTATGCTCGGAT +
Preference number: 4 (lower is better)
Translates to: DTFSRTLILDHGQVIFSEDPADS*LILCSD
Trigger: ATCCGAGCATAAGATTAAGCAGCTGTCTGCTGGATC...TTCAGAGAAGATGACCTGCCCATGATCAAGTATCAGTGTTCTTGAGAATGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647261.1
CDS-3UTR GCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTGGGGTGTTCTGTGATTaGCCAGGAGCTGATTGGGAA +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFGVFCD*PGADWE
Trigger: TTCCCAATCAGCTCCTGGGCAATCACAGAACACCCC...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR GCA 90 bp CACTGTTTTCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCGTGAGAACCACAGTATaGTCTCCACCACAGGCTACT +
Preference number: 4 (lower is better)
Translates to: HCFLGFLMNCYLHHQACIVRTTV*SPPQAT
Trigger: AGTAGCCTGTGGTGGAGAGCATACTGTGGTTCTCAC...GATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGAAAACAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp GTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTGCTGATAGAGTCCTCTaGAGTACATTTCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: VSYGFYLWERLIVILDNLADRVL*STFPEV
Trigger: AACCTCAGGAAATGTACTGCAGAGGACTCTATCAGC...AAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp TATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTTTCTGGTTCCTCTGGCTaGATGAGGTCCTGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: YSDDSDSCGSGRHLYYHFSGSSG*MRSCSD
Trigger: ATCTGAACAGGACCTCATGCAGCCAGAGGAACCAGA...AAAGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp CACTGTTTTCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCTCTGGTTCCTCTGGCTaGATGAGGTCCTGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: HCFLGFLMNCYLHHQACISGSSG*MRSCSD
Trigger: ATCTGAACAGGACCTCATGCAGCCAGAGGAACCAGA...GATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGAAAACAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp CCAAAATTTACCAGTGCCTCCTATTGTCTTTGGCTCCTTAACACAGCTGCATCATTTGCTTCTACCTCTTaGTCCTCTATTCCATTTCCT +
Preference number: 4 (lower is better)
Translates to: PKFTSASYCLWLLNTAASFASTS*SSIPFP
Trigger: AGGAAATGGAATAGAGGAGCAAGAGGTAGAAGCAAA...TGATGCAGCTGTGTTAAGGAGCCAAAGACAATAGGAGGCACTGGTAAATTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR GCA 90 bp ATGTATCCTTTTGGGTTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGACTGGCAGAATACTCTaGTTTGTCTGTAAGGTCATC +
Preference number: 4 (lower is better)
Translates to: MYPFGFSLYSQMARSSRLTGRIL*FVCKVI
Trigger: GATGACCTTACAGACAAAGCAGAGTATTCTGCCAGT...CAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAACCCAAAAGGATACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482855.5
CDS-3UTR CCA 90 bp TGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCAGTCCTAATTTTCCGTaGCGACCATCTCCAAAAGTA +
Preference number: 4 (lower is better)
Translates to: WSPMDFISGSGSLLFLTISPNFP*RPSPKV
Trigger: TACTTTTGGAGATGGTCGCCACGGAAAATTAGGACT...GATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp CACTGTTTTCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTCATGATGTGTGTCTaGTTCCTCTGGCTGCATGAG +
Preference number: 4 (lower is better)
Translates to: HCFLGFLMNCYLHHQACILMMCV*FLWLHE
Trigger: CTCATGCAGCCAGAGGAACCAGACACACATCATGAG...GATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGAAAACAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474584.5
CDS-3UTR CCA 90 bp ATGTATCCTTTTGGGTTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGCAATTTGGGAGTGACTaGCAGAATACTCTGCTTTGT +
Preference number: 4 (lower is better)
Translates to: MYPFGFSLYSQMARSSRLQFGSD*QNTLLC
Trigger: ACAAAGCAGAGTATTCTGCCAGTCACTCCCAAATTG...CAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAACCCAAAAGGATACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482855.5
CDS-3UTR CCA 90 bp CCAAAATTTACCAGTGCCTCCTATTGTCTTTGGCTCCTTAACACAGCTGCATCAAAGAGATCACGTTTTTaGGATCTAAGCTCTGAACAC +
Preference number: 4 (lower is better)
Translates to: PKFTSASYCLWLLNTAASKRSRF*DLSSEH
Trigger: GTGTTCAGAGCTTAGATCCCAAAAACGTGATCTCTT...TGATGCAGCTGTGTTAAGGAGCCAAAGACAATAGGAGGCACTGGTAAATTTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR TCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATACACAGCATTCTCCGTaGGAACCACAGTATGCTCTC +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYTQHSP*EPQYAL
Trigger: GAGAGCATACTGTGGTTCTCACGGAGAATGCTGTGT...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR TCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTTTTGCCACACCACGATaGGGAGCAGCAAAAACTACC +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFFATPR*GAAKTT
Trigger: GGTAGTTTTTGCTGCTCCTCATCGTGGTGTGGCAAA...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
41% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR TCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTGCCACACCACGATaGGGAGCAGCAAAAACTACC +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYFATPR*GAAKTT
Trigger: GGTAGTTTTTGCTGCTCCTCATCGTGGTGTGGCAAA...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR TCA 90 bp GTAGGAACACTTTCATCATCTCCCACAGTTTTCTTCTTGCTTTCCACATTTTCAACATCGTGGAAAGACTaGATTGGGGAGAAAACAAGC +
Preference number: 4 (lower is better)
Translates to: VGTLSSSPTVFFLLSTFSTSWKD*IGEKTS
Trigger: GCTTGTTTTCTCCCCAATTCAGTCTTTCCACGATGT...TGAAAATGTGGAAAGCAAGAAGAAAACTGTGGGAGATGATGAAAGTGTTCCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTGTTCCTCTGGCTGCATaGGGTCCTGTTCAGATAAGA +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFVPLAA*GPVQIR
Trigger: TCTTATCTGAACAGGACCTCATGCAGCCAGAGGAAC...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR TCA 90 bp TTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGTTTTCATGTTCCTCTGGCTGCATaGGGTCCTGTTCAGATAAGA +
Preference number: 4 (lower is better)
Translates to: FLMNCYLHHQACILLGFHVPLAA*GPVQIR
Trigger: TCTTATCTGAACAGGACCTCATGCAGCCAGAGGAAC...ATGAAAACCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp ATGTATCCTTTTGGGTTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGTGGAATTCAGGCTCATaGTGTGTGTCATGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: MYPFGFSLYSQMARSSRLWNSGS*CVSCLR
Trigger: TCTTAAACATGACACACATCATGAGCCTGAATTCCA...CAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAACCCAAAAGGATACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTTCAGCTATACCCTGTTaGCTCTCACTTGCACCTTCC +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFSAIPC*LSLAPS
Trigger: GGAAGGTGCAAGTGAGAGTCAACAGGGTATAGCTGA...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS-3UTR TCA 90 bp TATCCTTTTGGGTTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCTTTCAATAGTTTCAGCTaGGCTATCATCATTGGTTCT +
Preference number: 4 (lower is better)
Translates to: YPFGFSLYSQMARSSRLAFNSFS*AIIIGS
Trigger: AGAACCAATGATGATAGCTCAGCTGAAACTATTGAA...AGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAACCCAAAAGGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp TCTTCTCTCTGTATTTGTTGGTGGGATATTCTGATGATTCTGACTCATGTGGTTGAAACAATTTGGGAGTaGCTGGCAGAATACTCTGCT +
Preference number: 4 (lower is better)
Translates to: SSLCICWWDILMILTHVVETIWE*LAEYSA
Trigger: AGCAGAGTATTCTGCCAGTCACTCCCAAATTGTTTC...AACCACATGAGTCAGAATCATCAGAATATCCCACCAACAAATACAGAGAGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482855.5
CDS-3UTR TCA 90 bp GATACATTCTCAAGAACACTGATACTTGATCATGGGCAGGTCATCTTCTCTGAAAAGAACACTGATACTTaGTCATGGGCAGGTCATCTT +
Preference number: 4 (lower is better)
Translates to: DTFSRTLILDHGQVIFSEKNTDT*SWAGHL
Trigger: AAGATGACCTGCCCATGATCAAGTATCAGTGTTCTT...TTCAGAGAAGATGACCTGCCCATGATCAAGTATCAGTGTTCTTGAGAATGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647261.1
CDS-3UTR GCA 90 bp CGTAATGAGTGCCCGTTATATGCAAGGCATTTAAATTGTCTGACTGGCCATAATCAGTTGCATATACATTaGCTCCTTCTGTTGACACCA +
Preference number: 4 (lower is better)
Translates to: RNECPLYARHLNCLTGHNQLHIH*LLLLTP
Trigger: TGGTGTCAACAGAAGGAGGCAATGTATATGCAACTG...ATTATGGCCAGTCAGACAATTTAAATGCCTTGCATATAACGGGCACTCATTACG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR GCA 90 bp AAAATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCCAGTTGCATATACATTaGCTCCTTCTGTTGACACCA +
Preference number: 4 (lower is better)
Translates to: KMIWSPMDFISGSGSLLFQLHIH*LLLLTP
Trigger: TGGTGTCAACAGAAGGAGGCAATGTATATGCAACTG...GAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp GTAGGAACACTTTCATCATCTCCCACAGTTTTCTTCTTGCTTTCCACATTTTCAGATCCAGCAGACAGCTaGTTAATCTTATGCTCGGAT +
Preference number: 4 (lower is better)
Translates to: VGTLSSSPTVFFLLSTFSDPADS*LILCSD
Trigger: ATCCGAGCATAAGATTAAGCAGCTGTCTGCTGGATC...TGAAAATGTGGAAAGCAAGAAGAAAACTGTGGGAGATGATGAAAGTGTTCCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTGTGAGAACCACAGTATaGTCTCCACCACAGGCTACT +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFVRTTV*SPPQAT
Trigger: AGTAGCCTGTGGTGGAGAGCATACTGTGGTTCTCAC...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR GCA 90 bp TGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTTCAAAAAGAAAAGTaGCAAGACCCAGCTGACCAA +
Preference number: 4 (lower is better)
Translates to: WSPMDFISGSGSLLFLTIFQKEK*QDPADQ
Trigger: TTGGTCAGCTGGGTCTTGGCACTTTTCTTTTTGAAA...GATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp ATGTATCCTTTTGGGTTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGTTTCAAAAAGAAAAGTaGCAAGACCCAGCTGACCAA +
Preference number: 4 (lower is better)
Translates to: MYPFGFSLYSQMARSSRLFQKEK*QDPADQ
Trigger: TTGGTCAGCTGGGTCTTGGCACTTTTCTTTTTGAAA...CAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAACCCAAAAGGATACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp TTCTCAAGAACACTGATACTTGATCATGGGCAGGTCATCTTCTCTGAAAGCTTCTTTCAAAAAGAAAAGTaGCAAGACCCAGCTGACCAA +
Preference number: 4 (lower is better)
Translates to: FSRTLILDHGQVIFSESFFQKEK*QDPADQ
Trigger: TTGGTCAGCTGGGTCTTGGCACTTTTCTTTTTGAAA...GAAGCTTTCAGAGAAGATGACCTGCCCATGATCAAGTATCAGTGTTCTTGAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647261.1
CDS-3UTR GCA 90 bp AAAATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTCCTGAGGTTAAACTaGTATACGGCAGAAAAGTCG +
Preference number: 4 (lower is better)
Translates to: KMIWSPMDFISGSGSLLFFLRLN*YTAEKS
Trigger: CGACTTTTCTGCCGTATAGCAGTTTAACCTCAGGAA...GAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp AGGAACACTTTCATCATCTCCCACAGTTTTCTTCTTGCTTTCCACATTTTCAGCTTCCTGAGGTTAAACTaGTATACGGCAGAAAAGTCG +
Preference number: 4 (lower is better)
Translates to: RNTFIISHSFLLAFHIFSFLRLN*YTAEKS
Trigger: CGACTTTTCTGCCGTATAGCAGTTTAACCTCAGGAA...GCTGAAAATGTGGAAAGCAAGAAGAAAACTGTGGGAGATGATGAAAGTGTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp AATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTTTCCTGAGGTTAAACTaGTATACGGCAGAAAAGTCG +
Preference number: 4 (lower is better)
Translates to: NDLVSYGFYLWERLIVILFLRLN*YTAEKS
Trigger: CGACTTTTCTGCCGTATAGCAGTTTAACCTCAGGAA...AAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp GATATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTGCTGATAGAGTCCTCTaGAGTACATTTCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: DILMILTHVVLVGIFIITADRVL*STFPEV
Trigger: AACCTCAGGAAATGTACTGCAGAGGACTCTATCAGC...AGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAATATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTCTGGTTCCTCTGGCTaGATGAGGTCCTGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYSGSSG*MRSCSD
Trigger: ATCTGAACAGGACCTCATGCAGCCAGAGGAACCAGA...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR GCA 90 bp TCTTCTCTCTGTATTTGTTGGTGGGATATTCTGATGATTCTGACTCATGTGGTTGTAAGAGCTGTATCCTaGGTCAGTTCCCCAATTGTT +
Preference number: 4 (lower is better)
Translates to: SSLCICWWDILMILTHVVVRAVS*VSSPIV
Trigger: AACAATTGGGGAACTGACGCAGGATACAGCTCTTAC...AACCACATGAGTCAGAATCATCAGAATATCCCACCAACAAATACAGAGAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482855.5
ENST00000646020.1
CDS-3UTR GCA 90 bp CACTGTTTTCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCCTTCAAAAATTATTTaGCATTGGCCGGGCGTGGTG +
Preference number: 4 (lower is better)
Translates to: HCFLGFLMNCYLHHQACIPSKII*HWPGVV
Trigger: CACCACGCCCGGCCAATGGCAAATAATTTTTGAAGG...GATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGAAAACAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646020.1
CDS-3UTR GCA 90 bp CGTAATGAGTGCCCGTTATATGCAAGGCATTTAAATTGTCTGACTGGCCATAATGCCAAAATTTACCAGTaGCTCCTATTGTCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: RNECPLYARHLNCLTGHNAKIYQ*LLLSLA
Trigger: AGCCAAAGACAATAGGAGGCACTGGTAAATTTTGGC...ATTATGGCCAGTCAGACAATTTAAATGCCTTGCATATAACGGGCACTCATTACG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR CCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTAGACAGGTTTCCCAATaGTCACTTGCTGAGGGACAC +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFRQVSQ*SLAEGH
Trigger: GTGTCCCTCAGCAAGTGACCATTGGGAAACCTGTCT...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATAGACAGGTTTCCCAATaGTCACTTGCTGAGGGACAC +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYRQVSQ*SLAEGH
Trigger: GTGTCCCTCAGCAAGTGACCATTGGGAAACCTGTCT...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTCCACCACAGGCTACTTaGATCACCTTCTCCGGAATT +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFPPQAT*ITFSGI
Trigger: AATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGG...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATCCACCACAGGCTACTTaGATCACCTTCTCCGGAATT +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYPPQAT*ITFSGI
Trigger: AATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGG...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CCA 90 bp AGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGTTTTTCGATAGTCGTAGCTaGCTGCGTCATGAAAATCCC +
Preference number: 4 (lower is better)
Translates to: RISNELLSASSSMYPFGFFDSRS*LRHENP
Trigger: GGGATTTTCATGACGCAGCCAGCTACGACTATCGAA...AAACCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000482855.5
ENST00000646020.1
CDS-3UTR CCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTATTGCCTCAGGCTGCTaGAATCCATCAGCTATACCC +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFIASGC*NPSAIP
Trigger: GGGTATAGCTGATGGATTCCAGCAGCCTGAGGCAAT...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS-3UTR CCA 90 bp GGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGTTTTCATTGTACTCACAAATaGCCCGTTCCTCTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: GFLMNCYLHHQACILLGFHCTHK*PVPLGW
Trigger: CCAACCTAGAGGAACGGGCCATTTGTGAGTACAATG...AAAACCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTGATCCTAATCCTAACTaGCCCCAGTTGTTACTGCCA +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFDPNPN*PQLLLP
Trigger: TGGCAGTAACAACTGGGGTCAGTTAGGATTAGGATC...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR TCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTCACATGTTGGCTTGCTaGTGGCTGACTTTGATCCTA +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFHMLAC*WLTLIL
Trigger: TAGGATCAAAGTCAGCCATCAGCAAGCCAACATGTG...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR TCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATCCAATGGTCACTTGCTaGGGGACACAGACATTACTT +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYPMVTC*GTQTLL
Trigger: AAGTAATGTCTGTGTCCCTCAGCAAGTGACCATTGG...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR TCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTGCAAAAACTACCATGTaGCATCCACCACAAGCAACC +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFAKTTM*HPPQAT
Trigger: GGTTGCTTGTGGTGGATGTCACATGGTAGTTTTTGC...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR TCA 90 bp GTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTTGGAATTCAGGCTCATaGTGTGTGTCATGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: VSYGFYLWERLIVILDNLWNSGS*CVSCLR
Trigger: TCTTAAACATGACACACATCATGAGCCTGAATTCCA...AAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp AAAATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTGGAATTCAGGCTCATaGTGTGTGTCATGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: KMIWSPMDFISGSGSLLFWNSGS*CVSCLR
Trigger: TCTTAAACATGACACACATCATGAGCCTGAATTCCA...GAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp AATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTCATGAAAATCCCTTGTaGCACATGTTGTTTACATGC +
Preference number: 4 (lower is better)
Translates to: NDLVSYGFYLWERLIVILHENPL*HMLFTC
Trigger: GCATGTAAACAACATGTGTCACAAGGGATTTTCATG...AAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482855.5
ENST00000646020.1
CDS-3UTR TCA 90 bp GGAACACTTTCATCATCTCCCACAGTTTTCTTCTTGCTTTCCACATTTTCAGCACATGAAAATCCCTTGTaGCACATGTTGTTTACATGC +
Preference number: 4 (lower is better)
Translates to: GTLSSSPTVFFLLSTFSAHENPL*HMLFTC
Trigger: GCATGTAAACAACATGTGTCACAAGGGATTTTCATG...TGCTGAAAATGTGGAAAGCAAGAAGAAAACTGTGGGAGATGATGAAAGTGTTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000482855.5
ENST00000646020.1
CDS-3UTR TCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTGCTTCTGATTCCTTCTaGCTGTGTCCTCCATCACTT +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFASDSF*LCPPSL
Trigger: AAGTGATGGAGGACACAGTCAGAAGGAATCAGAAGC...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS-3UTR GCA 90 bp ATGTATCCTTTTGGGTTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGACCCCAGTTGTTACTaGCAAACATGTAAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: MYPFGFSLYSQMARSSRLDPSCY*QTCKVY
Trigger: ATAAACTTTACATGTTTGGCAGTAACAACTGGGGTC...CAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAACCCAAAAGGATACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp CTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATGACCCCAGTTGTTACTaGCAAACATGTAAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: LVSYGFYLWERLIVILDNDPSCY*QTCKVY
Trigger: ATAAACTTTACATGTTTGGCAGTAACAACTGGGGTC...ATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp TTCTCAAGAACACTGATACTTGATCATGGGCAGGTCATCTTCTCTGAAAGCTTCGACCCCAGTTGTTACTaGCAAACATGTAAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: FSRTLILDHGQVIFSESFDPSCY*QTCKVY
Trigger: ATAAACTTTACATGTTTGGCAGTAACAACTGGGGTC...GAAGCTTTCAGAGAAGATGACCTGCCCATGATCAAGTATCAGTGTTCTTGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647261.1
CDS-3UTR GCA 90 bp TCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGCAGTTGCATATACATTaGCTCCTTCTGTTGACACCA +
Preference number: 4 (lower is better)
Translates to: SRISNELLSASSSMYPFGQLHIH*LLLLTP
Trigger: TGGTGTCAACAGAAGGAGGCAATGTATATGCAACTG...CCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp TCTTCTCTCTGTATTTGTTGGTGGGATATTCTGATGATTCTGACTCATGTGGTTCAGTTGCATATACATTaGCTCCTTCTGTTGACACCA +
Preference number: 4 (lower is better)
Translates to: SSLCICWWDILMILTHVVQLHIH*LLLLTP
Trigger: TGGTGTCAACAGAAGGAGGCAATGTATATGCAACTG...AACCACATGAGTCAGAATCATCAGAATATCCCACCAACAAATACAGAGAGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp ATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTTTGATCCAGCAGACAGCTaGTTAATCTTATGCTCGGAT +
Preference number: 4 (lower is better)
Translates to: ILMILTHVVLVGIFIITFDPADS*LILCSD
Trigger: ATCCGAGCATAAGATTAAGCAGCTGTCTGCTGGATC...AAAAGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp CTGTTTTCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTGATCCAGCAGACAGCTaGTTAATCTTATGCTCGGAT +
Preference number: 4 (lower is better)
Translates to: LFSRISNELLSASSSMYPDPADS*LILCSD
Trigger: ATCCGAGCATAAGATTAAGCAGCTGTCTGCTGGATC...AGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGAAAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp CGTAATGAGTGCCCGTTATATGCAAGGCATTTAAATTGTCTGACTGGCCATAATTTTCAAAAAGAAAAGTaGCAAGACCCAGCTGACCAA +
Preference number: 4 (lower is better)
Translates to: RNECPLYARHLNCLTGHNFQKEK*QDPADQ
Trigger: TTGGTCAGCTGGGTCTTGGCACTTTTCTTTTTGAAA...ATTATGGCCAGTCAGACAATTTAAATGCCTTGCATATAACGGGCACTCATTACG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR GCA 90 bp TCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTTTGTTCCTGAGGTTAAACTaGTATACGGCAGAAAAGTCG +
Preference number: 4 (lower is better)
Translates to: SYGFYLWERLIVILDNLLFLRLN*YTAEKS
Trigger: CGACTTTTCTGCCGTATAGCAGTTTAACCTCAGGAA...CAAAAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp TATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTTGCTGATAGAGTCCTCTaGAGTACATTTCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: YSDDSDSCGSGRHLYYHFADRVL*STFPEV
Trigger: AACCTCAGGAAATGTACTGCAGAGGACTCTATCAGC...AAAGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp CACTGTTTTCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCGCTGATAGAGTCCTCTaGAGTACATTTCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: HCFLGFLMNCYLHHQACIADRVL*STFPEV
Trigger: AACCTCAGGAAATGTACTGCAGAGGACTCTATCAGC...GATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGAAAACAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp AGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGTTTGTAAGAGCTGTATCCTaGGTCAGTTCCCCAATTGTT +
Preference number: 4 (lower is better)
Translates to: RISNELLSASSSMYPFGFVRAVS*VSSPIV
Trigger: AACAATTGGGGAACTGACGCAGGATACAGCTCTTAC...AAACCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000482855.5
ENST00000646020.1
CDS-3UTR GCA 90 bp TCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCTTTTTCTTTCTTTTCATTTGCTTCTACCTCTTaGTCCTCTATTCCATTTCCT +
Preference number: 4 (lower is better)
Translates to: SLYSQMARSSRLAFSFFSFASTS*SSIPFP
Trigger: AGGAAATGGAATAGAGGAGCAAGAGGTAGAAGCAAA...TGAAAAGAAAGAAAAAGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp CTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATAAATTCATGATCCTCTaGTTTGTCTGTAAGGTCATC +
Preference number: 4 (lower is better)
Translates to: LVSYGFYLWERLIVILDNKFMIL*FVCKVI
Trigger: GATGACCTTACAGACAAAGCAGAGGATCATGAATTT...ATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp ATGTATCCTTTTGGGTTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGCCACAGTTTTCTTCTTaGTTTCCACATTTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: MYPFGFSLYSQMARSSRLPQFSS*FPHFQH
Trigger: ATGCTGAAAATGTGGAAAGCAAGAAGAAAACTGTGG...CAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAACCCAAAAGGATACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp CTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATGGATTTCTAATGAACTaGTATCTGCATCATCAAGCA +
Preference number: 4 (lower is better)
Translates to: LVSYGFYLWERLIVILDNGFLMN*YLHHQA
Trigger: TGCTTGATGATGCAGATAGCAGTTCATTAGAAATCC...ATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp GAAATTACAGAACAGTCAGTGAATACATTGAGGGCATATAACACATACCAGAAAGCCTTCACTCACCTCTaGTTTGTCTGTAAGGTCATC +
Preference number: 4 (lower is better)
Translates to: EITEQSVNTLRAYNTYQKAFTHL*FVCKVI
Trigger: GATGACCTTACAGACAAAGCAGAGGTGAGTGAAGGC...TTTCTGGTATGTGTTATATGCCCTCAATGTATTCACTGACTGTTCTGTAATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR GCA 90 bp CGTAATGAGTGCCCGTTATATGCAAGGCATTTAAATTGTCTGACTGGCCATAATATAACACGTAATGAGTaGCCGTTATATGCAAGGCAT +
Preference number: 4 (lower is better)
Translates to: RNECPLYARHLNCLTGHNITRNE*PLYARH
Trigger: ATGCCTTGCATATAACGGGCACTCATTACGTGTTAT...ATTATGGCCAGTCAGACAATTTAAATGCCTTGCATATAACGGGCACTCATTACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR CCA 90 bp GATATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTAGTCCTAATTTTCCGTaGCGACCATCTCCAAAAGTA +
Preference number: 4 (lower is better)
Translates to: DILMILTHVVLVGIFIITSPNFP*RPSPKV
Trigger: TACTTTTGGAGATGGTCGCCACGGAAAATTAGGACT...AGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp TCTTCTCTCTGTATTTGTTGGTGGGATATTCTGATGATTCTGACTCATGTGGTTAGTCCTAATTTTCCGTaGCGACCATCTCCAAAAGTA +
Preference number: 4 (lower is better)
Translates to: SSLCICWWDILMILTHVVSPNFP*RPSPKV
Trigger: TACTTTTGGAGATGGTCGCCACGGAAAATTAGGACT...AACCACATGAGTCAGAATCATCAGAATATCCCACCAACAAATACAGAGAGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp AATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGATAAGACACTCTCTTaGAGGTTTCTCTCAGAACAT +
Preference number: 4 (lower is better)
Translates to: NDLVSYGFYLWERLIVILDKTLS*RFLSEH
Trigger: ATGTTCTGAGAGAAACCTCCAAGAGAGTGTCTTATC...AAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATATAATCTGGTTCCTCTaGCTGCATGAGGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYIIWFL*LHEVLF
Trigger: GAACAGGACCTCATGCAGCCAGAGGAACCAGATTAT...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTATAATCTGGTTCCTCTaGCTGCATGAGGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFIIWFL*LHEVLF
Trigger: GAACAGGACCTCATGCAGCCAGAGGAACCAGATTAT...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CCA 90 bp GGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTTTGATTTATATAATCTGGTTCCTCTaGCTGCATGAGGTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: GFYLWERLIVILDNLLIYIIWFL*LHEVLF
Trigger: GAACAGGACCTCATGCAGCCAGAGGAACCAGATTAT...ATAAATCAAAAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
CDS-3UTR CCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTCGATAGTCGTAGCTaGCTGCGTCATGAAAATCCC +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYFDSRS*LRHENP
Trigger: GGGATTTTCATGACGCAGCCAGCTACGACTATCGAA...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTCATTGTACTCACAAATaGCCCGTTCCTCTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFHCTHK*PVPLGW
Trigger: CCAACCTAGAGGAACGGGCCATTTGTGAGTACAATG...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CCA 90 bp TTTCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGCATTGTACTCACAAATaGCCCGTTCCTCTAGGTTGG +
Preference number: 4 (lower is better)
Translates to: FLGFLMNCYLHHQACILLHCTHK*PVPLGW
Trigger: CCAACCTAGAGGAACGGGCCATTTGTGAGTACAATG...CAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp TGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTATGGATTTTATCTCTaGGAGCGGCTCATTGTTATT +
Preference number: 4 (lower is better)
Translates to: WSPMDFISGSGSLLFLTIYGFYL*ERLIVI
Trigger: AATAACAATGAGCCGCTCCCAGAGATAAAATCCATA...GATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATACATCGTGGAAAGACTaGATTGGGGAGAAAACAAGC +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYTSWKD*IGEKTS
Trigger: GCTTGTTTTCTCCCCAATTCAGTCTTTCCACGATGT...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR TCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTACATCGTGGAAAGACTaGATTGGGGAGAAAACAAGC +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFTSWKD*IGEKTS
Trigger: GCTTGTTTTCTCCCCAATTCAGTCTTTCCACGATGT...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR TCA 90 bp AAAATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCAAGGCTTTCTACAGTTaGAGAATTATCTATCTCTGC +
Preference number: 4 (lower is better)
Translates to: KMIWSPMDFISGSGSLLFKAFYS*RIIYLC
Trigger: GCAGAGATAGATAATTCTTCAACTGTAGAAAGCCTT...GAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTCTCCTCTGGGATCTCTaGCAAGCGATCACATTTAAA +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFLLWDL*QAITFK
Trigger: TTTAAATGTGATCGCTTGTCAGAGATCCCAGAGGAG...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS-3UTR TCA 90 bp ATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTTTCTCTACTTCCTCATCTaGAAATGCTTCGATAGTCGT +
Preference number: 4 (lower is better)
Translates to: ILMILTHVVLVGIFIITFLYFLI*KCFDSR
Trigger: ACGACTATCGAAGCATTTTCAGATGAGGAAGTAGAG...AAAAGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482855.5
CDS-3UTR TCA 90 bp ATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTTTGGATCTTTCCTCATCTaGAAATGCTTCGATAGTCGT +
Preference number: 4 (lower is better)
Translates to: ILMILTHVVLVGIFIITFGSFLI*KCFDSR
Trigger: ACGACTATCGAAGCATTTTCAGATGAGGAAAGATCC...AAAAGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646020.1
CDS-3UTR TCA 90 bp CGTAATGAGTGCCCGTTATATGCAAGGCATTTAAATTGTCTGACTGGCCATAATTTACTTGAAACATTCTaGCAAGGAACAGACAAACTG +
Preference number: 4 (lower is better)
Translates to: RNECPLYARHLNCLTGHNLLETF*QGTDKL
Trigger: CAGTTTGTCTGTTCCTTGTCAGAATGTTTCAAGTAA...ATTATGGCCAGTCAGACAATTTAAATGCCTTGCATATAACGGGCACTCATTACG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR GCA 90 bp ATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTTTCAGTTGCATATACATTaGCTCCTTCTGTTGACACCA +
Preference number: 4 (lower is better)
Translates to: ILMILTHVVLVGIFIITFQLHIH*LLLLTP
Trigger: TGGTGTCAACAGAAGGAGGCAATGTATATGCAACTG...AAAAGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATGATCCAGCAGACAGCTaGTTAATCTTATGCTCGGAT +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYDPADS*LILCSD
Trigger: ATCCGAGCATAAGATTAAGCAGCTGTCTGCTGGATC...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR GCA 90 bp ATCTTCTCTCTGTATTTGTTGGTGGGATATTCTGATGATTCTGACTCATGTGGTTTTCAAAAAGAAAAGTaGCAAGACCCAGCTGACCAA +
Preference number: 4 (lower is better)
Translates to: IFSLYLLVGYSDDSDSCGFQKEK*QDPADQ
Trigger: TTGGTCAGCTGGGTCTTGGCACTTTTCTTTTTGAAA...ACCACATGAGTCAGAATCATCAGAATATCCCACCAACAAATACAGAGAGAAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp TCTTCTCTCTGTATTTGTTGGTGGGATATTCTGATGATTCTGACTCATGTGGTTTTTCAAAAAGAAAAGTaGCAAGACCCAGCTGACCAA +
Preference number: 4 (lower is better)
Translates to: SSLCICWWDILMILTHVVFQKEK*QDPADQ
Trigger: TTGGTCAGCTGGGTCTTGGCACTTTTCTTTTTGAAA...AACCACATGAGTCAGAATCATCAGAATATCCCACCAACAAATACAGAGAGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp ATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTTTTTCCTGAGGTTAAACTaGTATACGGCAGAAAAGTCG +
Preference number: 4 (lower is better)
Translates to: ILMILTHVVLVGIFIITFFLRLN*YTAEKS
Trigger: CGACTTTTCTGCCGTATAGCAGTTTAACCTCAGGAA...AAAAGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATGCTGATAGAGTCCTCTaGAGTACATTTCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYADRVL*STFPEV
Trigger: AACCTCAGGAAATGTACTGCAGAGGACTCTATCAGC...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR GCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTGCTGATAGAGTCCTCTaGAGTACATTTCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFADRVL*STFPEV
Trigger: AACCTCAGGAAATGTACTGCAGAGGACTCTATCAGC...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR GCA 90 bp GAAATTACAGAACAGTCAGTGAATACATTGAGGGCATATAACACATACCAGAAAGCTGATAGAGTCCTCTaGAGTACATTTCCTGAGGTT +
Preference number: 4 (lower is better)
Translates to: EITEQSVNTLRAYNTYQKADRVL*STFPEV
Trigger: AACCTCAGGAAATGTACTGCAGAGGACTCTATCAGC...TTTCTGGTATGTGTTATATGCCCTCAATGTATTCACTGACTGTTCTGTAATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR GCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATGTAAGAGCTGTATCCTaGGTCAGTTCCCCAATTGTT +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYVRAVS*VSSPIV
Trigger: AACAATTGGGGAACTGACGCAGGATACAGCTCTTAC...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR GCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTGTAAGAGCTGTATCCTaGGTCAGTTCCCCAATTGTT +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFVRAVS*VSSPIV
Trigger: AACAATTGGGGAACTGACGCAGGATACAGCTCTTAC...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR GCA 90 bp GAAATTACAGAACAGTCAGTGAATACATTGAGGGCATATAACACATACCAGAAAGTAAGAGCTGTATCCTaGGTCAGTTCCCCAATTGTT +
Preference number: 4 (lower is better)
Translates to: EITEQSVNTLRAYNTYQKVRAVS*VSSPIV
Trigger: AACAATTGGGGAACTGACGCAGGATACAGCTCTTAC...TTTCTGGTATGTGTTATATGCCCTCAATGTATTCACTGACTGTTCTGTAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR GCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTCTGTTGACTCTCACTTaGACCTTCCATGTAACTGTC +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFLLTLT*TFHVTV
Trigger: GACAGTTACATGGAAGGTGCAAGTGAGAGTCAACAG...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS-3UTR GCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTCTATTGCCTCAGGCTaGTGGAATCCATCAGCTATA +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYSIASG*WNPSAI
Trigger: TATAGCTGATGGATTCCAGCAGCCTGAGGCAATAGA...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS-3UTR GCA 90 bp TCTTCTCTCTGTATTTGTTGGTGGGATATTCTGATGATTCTGACTCATGTGGTTTTTGCTTCTACCTCTTaGTCCTCTATTCCATTTCCT +
Preference number: 4 (lower is better)
Translates to: SSLCICWWDILMILTHVVFASTS*SSIPFP
Trigger: AGGAAATGGAATAGAGGAGCAAGAGGTAGAAGCAAA...AACCACATGAGTCAGAATCATCAGAATATCCCACCAACAAATACAGAGAGAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp AATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTCCACAGTTTTCTTCTTaGTTTCCACATTTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: NDLVSYGFYLWERLIVILPQFSS*FPHFQH
Trigger: ATGCTGAAAATGTGGAAAGCAAGAAGAAAACTGTGG...AAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp CACTGTTTTCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCAGTCCTAATTTTCCGTaGCGACCATCTCCAAAAGTA +
Preference number: 4 (lower is better)
Translates to: HCFLGFLMNCYLHHQACISPNFP*RPSPKV
Trigger: TACTTTTGGAGATGGTCGCCACGGAAAATTAGGACT...GATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGAAAACAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp TTTAAAATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTAGATAAGACACTCTCTTaGAGGTTTCTCTCAGAACAT +
Preference number: 4 (lower is better)
Translates to: FKMIWSPMDFISGSGSLLDKTLS*RFLSEH
Trigger: ATGTTCTGAGAGAAACCTCCAAGAGAGTGTCTTATC...TAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATTTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp TCTTCTCTCTGTATTTGTTGGTGGGATATTCTGATGATTCTGACTCATGTGGTTGATAAGACACTCTCTTaGAGGTTTCTCTCAGAACAT +
Preference number: 4 (lower is better)
Translates to: SSLCICWWDILMILTHVVDKTLS*RFLSEH
Trigger: ATGTTCTGAGAGAAACCTCCAAGAGAGTGTCTTATC...AACCACATGAGTCAGAATCATCAGAATATCCCACCAACAAATACAGAGAGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp GATATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTGATAAGACACTCTCTTaGAGGTTTCTCTCAGAACAT +
Preference number: 4 (lower is better)
Translates to: DILMILTHVVLVGIFIITDKTLS*RFLSEH
Trigger: ATGTTCTGAGAGAAACCTCCAAGAGAGTGTCTTATC...AGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAATATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp TTTGGGTTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCTTTTTCTTCTCTCTGTATTTGTTaGTGGGATATTCTGATGATT +
Preference number: 4 (lower is better)
Translates to: FGFSLYSQMARSSRLAFSSLCIC*WDILMI
Trigger: AATCATCAGAATATCCCACCAACAAATACAGAGAGA...AGAAAAAGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAACCCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp CTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATTCTCTCTGTATTTGTTaGTGGGATATTCTGATGATT +
Preference number: 4 (lower is better)
Translates to: LVSYGFYLWERLIVILDNSLCIC*WDILMI
Trigger: AATCATCAGAATATCCCACCAACAAATACAGAGAGA...ATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp TTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCTTTTTCTTTCTTTTAAGGCTTTCTACAGTTaGAGAATTATCTATCTCTGC +
Preference number: 4 (lower is better)
Translates to: FHCTHKWPVPLGWLFLSFKAFYS*RIIYLC
Trigger: GCAGAGATAGATAATTCTTCAACTGTAGAAAGCCTT...AAAAGAAAGAAAAAGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp TCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGAAGGCTTTCTACAGTTaGAGAATTATCTATCTCTGC +
Preference number: 4 (lower is better)
Translates to: SRISNELLSASSSMYPFGKAFYS*RIIYLC
Trigger: GCAGAGATAGATAATTCTTCAACTGTAGAAAGCCTT...CCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp AGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGTTTTGGAATTCAGGCTCATaGTGTGTGTCATGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: RISNELLSASSSMYPFGFWNSGS*CVSCLR
Trigger: TCTTAAACATGACACACATCATGAGCCTGAATTCCA...AAACCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTACCTACTTCCTCATCTaGAAATGCTTCGATAGTCGT +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFTYFLI*KCFDSR
Trigger: ACGACTATCGAAGCATTTTCAGATGAGGAAGTAGGT...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS-3UTR TCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTATTTCTTCTGCTTCTaGTTCCTTCTGACTGTGTCC +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYYFFCF*FLLTVS
Trigger: GGACACAGTCAGAAGGAATCAGAAGCAGAAGAAATA...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS-3UTR TCA 90 bp GATATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTTCAATAGTTTCAGCTaGGCTATCATCATTGGTTCT +
Preference number: 4 (lower is better)
Translates to: DILMILTHVVLVGIFIITFNSFS*AIIIGS
Trigger: AGAACCAATGATGATAGCTCAGCTGAAACTATTGAA...AGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAATATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp TCTTCTCTCTGTATTTGTTGGTGGGATATTCTGATGATTCTGACTCATGTGGTTTTCAATAGTTTCAGCTaGGCTATCATCATTGGTTCT +
Preference number: 4 (lower is better)
Translates to: SSLCICWWDILMILTHVVFNSFS*AIIIGS
Trigger: AGAACCAATGATGATAGCTCAGCTGAAACTATTGAA...AACCACATGAGTCAGAATCATCAGAATATCCCACCAACAAATACAGAGAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTCTCTACTTCCTCATCTaGAAATGCTTCGATAGTCGT +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFLYFLI*KCFDSR
Trigger: ACGACTATCGAAGCATTTTCAGATGAGGAAGTAGAG...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000482855.5
ENST00000642395.2
CDS-3UTR GCA 90 bp TCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTTTGGACCCCAGTTGTTACTaGCAAACATGTAAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: SYGFYLWERLIVILDNLLDPSCY*QTCKVY
Trigger: ATAAACTTTACATGTTTGGCAGTAACAACTGGGGTC...CAAAAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTCAGTTGCATATACATTaGCTCCTTCTGTTGACACCA +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFQLHIH*LLLLTP
Trigger: TGGTGTCAACAGAAGGAGGCAATGTATATGCAACTG...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR GCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATCAGTTGCATATACATTaGCTCCTTCTGTTGACACCA +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYQLHIH*LLLLTP
Trigger: TGGTGTCAACAGAAGGAGGCAATGTATATGCAACTG...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR GCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTTTCCTGAGGTTAAACTaGTATACGGCAGAAAAGTCG +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFFLRLN*YTAEKS
Trigger: CGACTTTTCTGCCGTATAGCAGTTTAACCTCAGGAA...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR GCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTCCTGAGGTTAAACTaGTATACGGCAGAAAAGTCG +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYFLRLN*YTAEKS
Trigger: CGACTTTTCTGCCGTATAGCAGTTTAACCTCAGGAA...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR GCA 90 bp GAAATTACAGAACAGTCAGTGAATACATTGAGGGCATATAACACATACCAGAAATTCCTGAGGTTAAACTaGTATACGGCAGAAAAGTCG +
Preference number: 4 (lower is better)
Translates to: EITEQSVNTLRAYNTYQKFLRLN*YTAEKS
Trigger: CGACTTTTCTGCCGTATAGCAGTTTAACCTCAGGAA...TTTCTGGTATGTGTTATATGCCCTCAATGTATTCACTGACTGTTCTGTAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR GCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATACTACTAAATTCTATTaGCTCAGGCTGCTGGAATCC +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYTTKFY*LRLLES
Trigger: GGATTCCAGCAGCCTGAGGCAATAGAATTTAGTAGT...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS-3UTR GCA 90 bp CACTGTTTTCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCTTTGCTTCTACCTCTTaGTCCTCTATTCCATTTCCT +
Preference number: 4 (lower is better)
Translates to: HCFLGFLMNCYLHHQACIFASTS*SSIPFP
Trigger: AGGAAATGGAATAGAGGAGCAAGAGGTAGAAGCAAA...GATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGAAAACAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp GATATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTAAATTCATGATCCTCTaGTTTGTCTGTAAGGTCATC +
Preference number: 4 (lower is better)
Translates to: DILMILTHVVLVGIFIITKFMIL*FVCKVI
Trigger: GATGACCTTACAGACAAAGCAGAGGATCATGAATTT...AGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAATATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp TCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTTTGCCACAGTTTTCTTCTTaGTTTCCACATTTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: SYGFYLWERLIVILDNLLPQFSS*FPHFQH
Trigger: ATGCTGAAAATGTGGAAAGCAAGAAGAAAACTGTGG...CAAAAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp TTTAAAATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTACCACAGTTTTCTTCTTaGTTTCCACATTTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: FKMIWSPMDFISGSGSLLPQFSS*FPHFQH
Trigger: ATGCTGAAAATGTGGAAAGCAAGAAGAAAACTGTGG...TAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATTTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp GATATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTGGATTTCTAATGAACTaGTATCTGCATCATCAAGCA +
Preference number: 4 (lower is better)
Translates to: DILMILTHVVLVGIFIITGFLMN*YLHHQA
Trigger: TGCTTGATGATGCAGATAGCAGTTCATTAGAAATCC...AGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAATATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp ATCTTCTCTCTGTATTTGTTGGTGGGATATTCTGATGATTCTGACTCATGTGGTGGATTTCTAATGAACTaGTATCTGCATCATCAAGCA +
Preference number: 4 (lower is better)
Translates to: IFSLYLLVGYSDDSDSCGGFLMN*YLHHQA
Trigger: TGCTTGATGATGCAGATAGCAGTTCATTAGAAATCC...ACCACATGAGTCAGAATCATCAGAATATCCCACCAACAAATACAGAGAGAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATAGTCCTAATTTTCCGTaGCGACCATCTCCAAAAGTA +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYSPNFP*RPSPKV
Trigger: TACTTTTGGAGATGGTCGCCACGGAAAATTAGGACT...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTAGTCCTAATTTTCCGTaGCGACCATCTCCAAAAGTA +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFSPNFP*RPSPKV
Trigger: TACTTTTGGAGATGGTCGCCACGGAAAATTAGGACT...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CCA 90 bp TTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGTTTTCATAGTCCTAATTTTCCGTaGCGACCATCTCCAAAAGTA +
Preference number: 4 (lower is better)
Translates to: FLMNCYLHHQACILLGFHSPNFP*RPSPKV
Trigger: TACTTTTGGAGATGGTCGCCACGGAAAATTAGGACT...ATGAAAACCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp GTAGGAACACTTTCATCATCTCCCACAGTTTTCTTCTTGCTTTCCACATTTTCATATGGATTTTATCTCTaGGAGCGGCTCATTGTTATT +
Preference number: 4 (lower is better)
Translates to: VGTLSSSPTVFFLLSTFSYGFYL*ERLIVI
Trigger: AATAACAATGAGCCGCTCCCAGAGATAAAATCCATA...TGAAAATGTGGAAAGCAAGAAGAAAACTGTGGGAGATGATGAAAGTGTTCCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp TCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTTTGTATGGATTTTATCTCTaGGAGCGGCTCATTGTTATT +
Preference number: 4 (lower is better)
Translates to: SYGFYLWERLIVILDNLLYGFYL*ERLIVI
Trigger: AATAACAATGAGCCGCTCCCAGAGATAAAATCCATA...CAAAAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp AGGAACACTTTCATCATCTCCCACAGTTTTCTTCTTGCTTTCCACATTTTCAGCTCTCTCTGTATTTGTTaGTGGGATATTCTGATGATT +
Preference number: 4 (lower is better)
Translates to: RNTFIISHSFLLAFHIFSSLCIC*WDILMI
Trigger: AATCATCAGAATATCCCACCAACAAATACAGAGAGA...GCTGAAAATGTGGAAAGCAAGAAGAAAACTGTGGGAGATGATGAAAGTGTTCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTTGGAATTCAGGCTCATaGTGTGTGTCATGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFWNSGS*CVSCLR
Trigger: TCTTAAACATGACACACATCATGAGCCTGAATTCCA...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR TCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTGGAATTCAGGCTCATaGTGTGTGTCATGTTTAAGA +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYWNSGS*CVSCLR
Trigger: TCTTAAACATGACACACATCATGAGCCTGAATTCCA...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR TCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATCATGAAAATCCCTTGTaGCACATGTTGTTTACATGC +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYHENPL*HMLFTC
Trigger: GCATGTAAACAACATGTGTCACAAGGGATTTTCATG...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR TCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTCATGAAAATCCCTTGTaGCACATGTTGTTTACATGC +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFHENPL*HMLFTC
Trigger: GCATGTAAACAACATGTGTCACAAGGGATTTTCATG...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR TCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATGTCTGGCTTTTCTACTaGTTCTCTTTCACTGTCAAA +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYVWLFY*FSFTVK
Trigger: TTTGACAGTGAAAGAGAATCAGTAGAAAAGCCAGAC...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS-3UTR TCA 90 bp TATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTTTTCAATAGTTTCAGCTaGGCTATCATCATTGGTTCT +
Preference number: 4 (lower is better)
Translates to: YSDDSDSCGSGRHLYYHFFNSFS*AIIIGS
Trigger: AGAACCAATGATGATAGCTCAGCTGAAACTATTGAA...AAAGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp ATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTTTGACCCCAGTTGTTACTaGCAAACATGTAAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: ILMILTHVVLVGIFIITFDPSCY*QTCKVY
Trigger: ATAAACTTTACATGTTTGGCAGTAACAACTGGGGTC...AAAAGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTCAAAAAGAAAAGTaGCAAGACCCAGCTGACCAA +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYFQKEK*QDPADQ
Trigger: TTGGTCAGCTGGGTCTTGGCACTTTTCTTTTTGAAA...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR GCA 90 bp TTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGTTTTCATTTTCAAAAAGAAAAGTaGCAAGACCCAGCTGACCAA +
Preference number: 4 (lower is better)
Translates to: FLMNCYLHHQACILLGFHFQKEK*QDPADQ
Trigger: TTGGTCAGCTGGGTCTTGGCACTTTTCTTTTTGAAA...ATGAAAACCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTTTTGCTTCTACCTCTTaGTCCTCTATTCCATTTCCT +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFFASTS*SSIPFP
Trigger: AGGAAATGGAATAGAGGAGCAAGAGGTAGAAGCAAA...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR GCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTGCTTCTACCTCTTaGTCCTCTATTCCATTTCCT +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYFASTS*SSIPFP
Trigger: AGGAAATGGAATAGAGGAGCAAGAGGTAGAAGCAAA...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTGATAAGACACTCTCTTaGAGGTTTCTCTCAGAACAT +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFDKTLS*RFLSEH
Trigger: ATGTTCTGAGAGAAACCTCCAAGAGAGTGTCTTATC...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CCA 90 bp TTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGTTTTCATGATAAGACACTCTCTTaGAGGTTTCTCTCAGAACAT +
Preference number: 4 (lower is better)
Translates to: FLMNCYLHHQACILLGFHDKTLS*RFLSEH
Trigger: ATGTTCTGAGAGAAACCTCCAAGAGAGTGTCTTATC...ATGAAAACCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTCCATACCGTATGTTTTaGTCAGTTTCCACTTCATCA +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFPYRMF*SVSTSS
Trigger: TGATGAAGTGGAAACTGACCAAAACATACGGTATGG...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS-3UTR CCA 90 bp ATCTTCTCTCTGTATTTGTTGGTGGGATATTCTGATGATTCTGACTCATGTGGTTCTCTCTGTATTTGTTaGTGGGATATTCTGATGATT +
Preference number: 4 (lower is better)
Translates to: IFSLYLLVGYSDDSDSCGSLCIC*WDILMI
Trigger: AATCATCAGAATATCCCACCAACAAATACAGAGAGA...ACCACATGAGTCAGAATCATCAGAATATCCCACCAACAAATACAGAGAGAAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp GAAATTACAGAACAGTCAGTGAATACATTGAGGGCATATAACACATACCAGAAATATTCCAGAACTTTTTaGAACCTGATGGCCCGTTTT +
Preference number: 4 (lower is better)
Translates to: EITEQSVNTLRAYNTYQKYSRTF*NLMARF
Trigger: AAAACGGGCCATCAGGTTCCAAAAAGTTCTGGAATA...TTTCTGGTATGTGTTATATGCCCTCAATGTATTCACTGACTGTTCTGTAATTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR TCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTAAGGCTTTCTACAGTTaGAGAATTATCTATCTCTGC +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFKAFYS*RIIYLC
Trigger: GCAGAGATAGATAATTCTTCAACTGTAGAAAGCCTT...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR TCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATAAGGCTTTCTACAGTTaGAGAATTATCTATCTCTGC +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYKAFYS*RIIYLC
Trigger: GCAGAGATAGATAATTCTTCAACTGTAGAAAGCCTT...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR TCA 90 bp GGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTTTGATTTATAAGGCTTTCTACAGTTaGAGAATTATCTATCTCTGC +
Preference number: 4 (lower is better)
Translates to: GFYLWERLIVILDNLLIYKAFYS*RIIYLC
Trigger: GCAGAGATAGATAATTCTTCAACTGTAGAAAGCCTT...ATAAATCAAAAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR TCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTCAATAGTTTCAGCTaGGCTATCATCATTGGTTCT +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYFNSFS*AIIIGS
Trigger: AGAACCAATGATGATAGCTCAGCTGAAACTATTGAA...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR TCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTTTCAATAGTTTCAGCTaGGCTATCATCATTGGTTCT +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFFNSFS*AIIIGS
Trigger: AGAACCAATGATGATAGCTCAGCTGAAACTATTGAA...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR TCA 90 bp GAAATTACAGAACAGTCAGTGAATACATTGAGGGCATATAACACATACCAGAAATGTGAATGCCTCAATTaGGTTTTAGAATACCATCCA +
Preference number: 4 (lower is better)
Translates to: EITEQSVNTLRAYNTYQKCECLN*VLEYHP
Trigger: TGGATGGTATTCTAAAACTCAATTGAGGCATTCACA...TTTCTGGTATGTGTTATATGCCCTCAATGTATTCACTGACTGTTCTGTAATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR GCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTGACCCCAGTTGTTACTaGCAAACATGTAAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFDPSCY*QTCKVY
Trigger: ATAAACTTTACATGTTTGGCAGTAACAACTGGGGTC...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR GCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATGACCCCAGTTGTTACTaGCAAACATGTAAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYDPSCY*QTCKVY
Trigger: ATAAACTTTACATGTTTGGCAGTAACAACTGGGGTC...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR GCA 90 bp GAAATTACAGAACAGTCAGTGAATACATTGAGGGCATATAACACATACCAGAAAGACCCCAGTTGTTACTaGCAAACATGTAAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: EITEQSVNTLRAYNTYQKDPSCY*QTCKVY
Trigger: ATAAACTTTACATGTTTGGCAGTAACAACTGGGGTC...TTTCTGGTATGTGTTATATGCCCTCAATGTATTCACTGACTGTTCTGTAATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR GCA 90 bp GGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTTTGATTTATGACCCCAGTTGTTACTaGCAAACATGTAAAGTTTAT +
Preference number: 4 (lower is better)
Translates to: GFYLWERLIVILDNLLIYDPSCY*QTCKVY
Trigger: ATAAACTTTACATGTTTGGCAGTAACAACTGGGGTC...ATAAATCAAAAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTGTTCAATCAATTTCCTaGCATACCGTATGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFVQSIS*HTVCFG
Trigger: ACCAAAACATACGGTATGGCAGGAAATTGATTGAAC...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS-3UTR GCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTAAATTCATGATCCTCTaGTTTGTCTGTAAGGTCATC +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFKFMIL*FVCKVI
Trigger: GATGACCTTACAGACAAAGCAGAGGATCATGAATTT...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339363.7
ENST00000642395.2
CDS-3UTR GCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTCCACAGTTTTCTTCTTaGTTTCCACATTTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFPQFSS*FPHFQH
Trigger: ATGCTGAAAATGTGGAAAGCAAGAAGAAAACTGTGG...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR GCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATCCACAGTTTTCTTCTTaGTTTCCACATTTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYPQFSS*FPHFQH
Trigger: ATGCTGAAAATGTGGAAAGCAAGAAGAAAACTGTGG...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR GCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTGGATTTCTAATGAACTaGTATCTGCATCATCAAGCA +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFGFLMN*YLHHQA
Trigger: TGCTTGATGATGCAGATAGCAGTTCATTAGAAATCC...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR GCA 90 bp GGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTTTGATTTATGGATTTCTAATGAACTaGTATCTGCATCATCAAGCA +
Preference number: 4 (lower is better)
Translates to: GFYLWERLIVILDNLLIYGFLMN*YLHHQA
Trigger: TGCTTGATGATGCAGATAGCAGTTCATTAGAAATCC...ATAAATCAAAAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR GCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATGGATTTCTAATGAACTaGTATCTGCATCATCAAGCA +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYGFLMN*YLHHQA
Trigger: TGCTTGATGATGCAGATAGCAGTTCATTAGAAATCC...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTTATGGATTTTATCTCTaGGAGCGGCTCATTGTTATT +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFYGFYL*ERLIVI
Trigger: AATAACAATGAGCCGCTCCCAGAGATAAAATCCATA...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CCA 90 bp TTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGTTTTCATTATGGATTTTATCTCTaGGAGCGGCTCATTGTTATT +
Preference number: 4 (lower is better)
Translates to: FLMNCYLHHQACILLGFHYGFYL*ERLIVI
Trigger: AATAACAATGAGCCGCTCCCAGAGATAAAATCCATA...ATGAAAACCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTATGGATTTTATCTCTaGGAGCGGCTCATTGTTATT +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYYGFYL*ERLIVI
Trigger: AATAACAATGAGCCGCTCCCAGAGATAAAATCCATA...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CCA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTTCTCTCTGTATTTGTTaGTGGGATATTCTGATGATT +
Preference number: 4 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFSLCIC*WDILMI
Trigger: AATCATCAGAATATCCCACCAACAAATACAGAGAGA...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CCA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTCTCTCTGTATTTGTTaGTGGGATATTCTGATGATT +
Preference number: 4 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYSLCIC*WDILMI
Trigger: AATCATCAGAATATCCCACCAACAAATACAGAGAGA...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS CCA 90 bp GCTACTCCGCACCGACGCGGGCCGCGAAAGCCCCCAAGTTCCGCATaGCGAAACTCCGGAGATCAACTACAACCGCGCTCCCGGAAGTCA +
Preference number: 5 (lower is better)
Translates to: ATPHRRGPRKPPSSA*RNSGDQLQPRSRKS
Trigger: TGACTTCCGGGAGCGCGGTTGTAGTTGATCTCCGGAGTTTCGCCATGCGGAACTTGGGGGCTTTCGCGGCCCGCGTCGGTGCGGAGTAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000644337.1
ENST00000647261.1
CDS CCA 90 bp GGGAGCTCAGGACCTCCAAAGTGCACAAGTCTGGAGTCCGCACTTTaGGGAGTTTACAGAAAGTGTCCCTCCCTGGCCGGGCGCGGTGGC +
Preference number: 5 (lower is better)
Translates to: GSSGPPKCTSLESAL*GVYRKCPSLAGRGG
Trigger: GCCACCGCGCCCGGCCAGGGAGGGACACTTTCTGTAAACTCCCCAAAGTGCGGACTCCAGACTTGTGCACTTTGGAGGTCCTGAGCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642170.1
CDS-3UTR CAA 90 bp GATCACCTTCTCCGGAATTTCAGACACCAGCTGGGGTGTTCTGTGATTGCCCAGGCTGTAGAGGACGGTTaGGTCGGGGCTAAAGCAGCT +
Preference number: 5 (lower is better)
Translates to: DHLLRNFRHQLGCSVIAQAVEDG*VGAKAA
Trigger: AGCTGCTTTAGCCCCGACCAAACCGTCCTCTACAGC...CTGGGCAATCACAGAACACCCCAGCTGGTGTCTGAAATTCCGGAGAAGGTGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR CAA 90 bp GATCACCTTCTCCGGAATTTCAGACACCAGCTGGGGTGTTCTGTGATTGCCCAGTCCACCACAGGCTACTaGGATCACCTTCTCCGGAAT +
Preference number: 5 (lower is better)
Translates to: DHLLRNFRHQLGCSVIAQSTTGY*DHLLRN
Trigger: ATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGGA...CTGGGCAATCACAGAACACCCCAGCTGGTGTCTGAAATTCCGGAGAAGGTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR CAA 90 bp CTACTTGGATCACCTTCTCCGGAATTTCAGACACCAGCTGGGGTGTTCTGTGATCATTGCCTCCTTCTGTaGACACCAGGGTGTGGTTCC +
Preference number: 5 (lower is better)
Translates to: LLGSPSPEFQTPAGVFCDHCLLL*TPGCGS
Trigger: GGAACCACACCCTGGTGTCAACAGAAGGAGGCAATG...ATCACAGAACACCCCAGCTGGTGTCTGAAATTCCGGAGAAGGTGATCCAAGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR CAA 90 bp CACAGTATGCTCTCCACCACAGGCTACTTGGATCACCTTCTCCGGAATTTCAGATGGAAGACCTTGCTCTaGGGAGCACAGTTAGGGCAG +
Preference number: 5 (lower is better)
Translates to: HSMLSTTGYLDHLLRNFRWKTLL*GAQLGQ
Trigger: CTGCCCTAACTGTGCTCCCAAGAGCAAGGTCTTCCA...TCTGAAATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGGAGAGCATACTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS TCA 90 bp TACTCCTCTCCATCCTGCCTTTCATTCTCTTCTTCGCCTGTCTCCTaGTACTTCCCCTCTTCTTCCTCCTCCTCTTCTCTGTTCCTCCTG +
Preference number: 5 (lower is better)
Translates to: YSSPSCLSFSSSPVS*YFPSSSSSSSLFLL
Trigger: CAGGAGGAACAGAGAAGAGGAGGAGGAAGAAGAGGGGAAGTATCAGGAGACAGGCGAAGAAGAGAATGAAAGGCAGGATGGAGAGGAGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS GCA 90 bp GACCTCTCCCTCTCTCTTCGCCGCATACGTGCTGATAGAGTCCTCTaGAGTACATTTCCTGAGGTTAAACTGCTATACGGCAGAAAAGTC +
Preference number: 5 (lower is better)
Translates to: DLSLSLRRIRADRVL*STFPEVKLLYGRKV
Trigger: GACTTTTCTGCCGTATAGCAGTTTAACCTCAGGAAATGTACTGCAGAGGACTCTATCAGCACGTATGCGGCGAAGAGAGAGGGAGAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000339363.7
ENST00000474584.5
ENST00000482855.5
ENST00000494707.6
ENST00000494841.1
ENST00000642170.1
ENST00000642395.2
ENST00000642739.1
ENST00000645032.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp AGGCTACTTGGATCACCTTCTCCGGAATTTCAGACACCAGCTGGGGTGTTCTGTCCAGTTGCATATACATaGCCTCCTTCTGTTGACACC +
Preference number: 5 (lower is better)
Translates to: RLLGSPSPEFQTPAGVFCPVAYT*PPSVDT
Trigger: GGTGTCAACAGAAGGAGGCAATGTATATGCAACTGG...ACAGAACACCCCAGCTGGTGTCTGAAATTCCGGAGAAGGTGATCCAAGTAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR CAA 90 bp CCATCCTCTGCAACTGAACTGAAAGACAGCACAGGTCACATTAGACACCTGCAGACCCAGCTGACCAAATaGTCCCAGCCCAAAGGTATA +
Preference number: 5 (lower is better)
Translates to: PSSATELKDSTGHIRHLQTQLTK*SQPKGI
Trigger: TATACCTTTGGGCTGGGACAATTTGGTCAGCTGGGT...CTGCAGGTGTCTAATGTGACCTGTGCTGTCTTTCAGTTCAGTTGCAGAGGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR CAA 90 bp AGTGCCAAGACCCAGCTGACCAAATTGTCCCAGCCCAAAGGTATACACAGCATTAAAGCCTGGAAGACCTaGCTCTTGGGAGCACAGTTA +
Preference number: 5 (lower is better)
Translates to: SAKTQLTKLSQPKGIHSIKAWKT*LLGAQL
Trigger: TAACTGTGCTCCCAAGAGCAAGGTCTTCCAGGCTTT...AATGCTGTGTATACCTTTGGGCTGGGACAATTTGGTCAGCTGGGTCTTGGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS CCA 90 bp GGTTCCTCTGGCTGCATGAGGTCCTGTTCAGATAAGACACTCTCTTaGAGGTTTCTCTCAGAACATCGTGGAAAGACTGAATTGGGGAGA +
Preference number: 5 (lower is better)
Translates to: GSSGCMRSCSDKTLS*RFLSEHRGKTELGR
Trigger: TCTCCCCAATTCAGTCTTTCCACGATGTTCTGAGAGAAACCTCCAAGAGAGTGTCTTATCTGAACAGGACCTCATGCAGCCAGAGGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000339363.7
ENST00000474584.5
ENST00000482855.5
ENST00000494707.6
ENST00000642170.1
ENST00000642395.2
ENST00000642739.1
ENST00000644238.1
ENST00000644337.1
ENST00000645032.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp TGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCGCTGTAGAGGACGGTTaGGTCGGGGCTAAAGCAGCT +
Preference number: 5 (lower is better)
Translates to: WSPMDFISGSGSLLFLTIAVEDG*VGAKAA
Trigger: AGCTGCTTTAGCCCCGACCAAACCGTCCTCTACAGC...GATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp CTGACCAAATTGTCCCAGCCCAAAGGTATACACAGCATTCTCCGTGAGAACCACTTTCCCAATGGTCACTaGCTGAGGGACACAGACATT +
Preference number: 5 (lower is better)
Translates to: LTKLSQPKGIHSILRENHFPNGH*LRDTDI
Trigger: AATGTCTGTGTCCCTCAGCAAGTGACCATTGGGAAA...GTGGTTCTCACGGAGAATGCTGTGTATACCTTTGGGCTGGGACAATTTGGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS GCA 90 bp AGGCTTAACCTCTCTCTTCGCCGCATACGTGCTGATAGAGTCCTCTaGAGTACATTTCCTGAGGTTAAACTGCTATACGGCAGAAAAGTC +
Preference number: 5 (lower is better)
Translates to: RLNLSLRRIRADRVL*STFPEVKLLYGRKV
Trigger: GACTTTTCTGCCGTATAGCAGTTTAACCTCAGGAAATGTACTGCAGAGGACTCTATCAGCACGTATGCGGCGAAGAGAGAGGTTAAGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000464437.1
CDS GCA 90 bp CTTTACTGCATTCAATACATAACCGGGAGCTCAGGACCTCCAAAGTaGACAAGTCTGGAGTCCGCACTTTGGGGAGTTTACAGAAAGTGT +
Preference number: 5 (lower is better)
Translates to: LYCIQYITGSSGPPK*TSLESALWGVYRKC
Trigger: ACACTTTCTGTAAACTCCCCAAAGTGCGGACTCCAGACTTGTGCACTTTGGAGGTCCTGAGCTCCCGGTTATGTATTGAATGCAGTAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642170.1
CDS-3UTR CAA 90 bp CACAGTATGCTCTCCACCACAGGCTACTTGGATCACCTTCTCCGGAATTTCAGATTGACACATGTTGGCTaGCTGATGGCTGACTTTGAT +
Preference number: 5 (lower is better)
Translates to: HSMLSTTGYLDHLLRNFRLTHVG*LMADFD
Trigger: ATCAAAGTCAGCCATCAGCAAGCCAACATGTGTCAA...TCTGAAATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGGAGAGCATACTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR CAA 90 bp TTCTCAAGAACACTGATACTTGATCATGGGCAGGTCATCTTCTCTGAAAGCTTCCATTGCCTCCTTCTGTaGACACCAGGGTGTGGTTCC +
Preference number: 5 (lower is better)
Translates to: FSRTLILDHGQVIFSESFHCLLL*TPGCGS
Trigger: GGAACCACACCCTGGTGTCAACAGAAGGAGGCAATG...GAAGCTTTCAGAGAAGATGACCTGCCCATGATCAAGTATCAGTGTTCTTGAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647261.1
CDS-3UTR CAA 90 bp TATCCTTTTGGGTTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCTTCCACCACAGGCTACTaGGATCACCTTCTCCGGAAT +
Preference number: 5 (lower is better)
Translates to: YPFGFSLYSQMARSSRLASTTGY*DHLLRN
Trigger: ATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGGA...AGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAACCCAAAAGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp AGAACACTGATACTTGATCATGGGCAGGTCATCTTCTCTGAAAGCTTCTTTGGGTCCACCACAGGCTACTaGGATCACCTTCTCCGGAAT +
Preference number: 5 (lower is better)
Translates to: RTLILDHGQVIFSESFFGSTTGY*DHLLRN
Trigger: ATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGGA...CCCAAAGAAGCTTTCAGAGAAGATGACCTGCCCATGATCAAGTATCAGTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647261.1
CDS-3UTR CAA 90 bp CCAAAATTTACCAGTGCCTCCTATTGTCTTTGGCTCCTTAACACAGCTGCATCACCCACTGATTTTGCCTaGCCTTCACTCACCTCTGCT +
Preference number: 5 (lower is better)
Translates to: PKFTSASYCLWLLNTAASPTDFA*PSLTSA
Trigger: AGCAGAGGTGAGTGAAGGCAAGGCAAAATCAGTGGG...TGATGCAGCTGTGTTAAGGAGCCAAAGACAATAGGAGGCACTGGTAAATTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR CAA 90 bp ACCAGTGCCTCCTATTGTCTTTGGCTCCTTAACACAGCTGCATCAGTTGCTTTTCTTCTCCCACTGATTTaGCCTTGCCTTCACTCACCT +
Preference number: 5 (lower is better)
Translates to: TSASYCLWLLNTAASVAFLLPLI*PCLHSP
Trigger: AGGTGAGTGAAGGCAAGGCAAAATCAGTGGGAGAAG...AAAAGCAACTGATGCAGCTGTGTTAAGGAGCCAAAGACAATAGGAGGCACTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR CAA 90 bp CCAAAATTTACCAGTGCCTCCTATTGTCTTTGGCTCCTTAACACAGCTGCATCAGACTGGACTGGCATTTaGGACCTCTGCTCTTTCCCA +
Preference number: 5 (lower is better)
Translates to: PKFTSASYCLWLLNTAASDWTGI*DLCSFP
Trigger: TGGGAAAGAGCAGAGGTCCAAAATGCCAGTCCAGTC...TGATGCAGCTGTGTTAAGGAGCCAAAGACAATAGGAGGCACTGGTAAATTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS CCA 90 bp CACTCTCTTGGAGGTTTCTCTCAGAACATCGTGGAAAGACTGAATTaGGGAGAAAACAAGCAGAAAGGCCAAGAGTCCCTTCTATTGGAG +
Preference number: 5 (lower is better)
Translates to: HSLGGFSQNIVERLN*GENKQKGQESLLLE
Trigger: CTCCAATAGAAGGGACTCTTGGCCTTTCTGCTTGTTTTCTCCCCAATTCAGTCTTTCCACGATGTTCTGAGAGAAACCTCCAAGAGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000339363.7
ENST00000474584.5
ENST00000482855.5
ENST00000494707.6
ENST00000494841.1
ENST00000642170.1
ENST00000642395.2
ENST00000642739.1
ENST00000644238.1
ENST00000644337.1
ENST00000645032.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp AGGAACACTTTCATCATCTCCCACAGTTTTCTTCTTGCTTTCCACATTTTCAGCCATTGCCTCCTTCTGTaGACACCAGGGTGTGGTTCC +
Preference number: 5 (lower is better)
Translates to: RNTFIISHSFLLAFHIFSHCLLL*TPGCGS
Trigger: GGAACCACACCCTGGTGTCAACAGAAGGAGGCAATG...GCTGAAAATGTGGAAAGCAAGAAGAAAACTGTGGGAGATGATGAAAGTGTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp ACCAGTGCCTCCTATTGTCTTTGGCTCCTTAACACAGCTGCATCAGTTGCTTTTCCAGTTGCATATACATaGCCTCCTTCTGTTGACACC +
Preference number: 5 (lower is better)
Translates to: TSASYCLWLLNTAASVAFPVAYT*PPSVDT
Trigger: GGTGTCAACAGAAGGAGGCAATGTATATGCAACTGG...AAAAGCAACTGATGCAGCTGTGTTAAGGAGCCAAAGACAATAGGAGGCACTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR CAA 90 bp GAAAAGTGCCAAGACCCAGCTGACCAAATTGTCCCAGCCCAAAGGTATACACAGATTTGCCCTTCGGAATaGTCACCCCACATAAAAAGT +
Preference number: 5 (lower is better)
Translates to: EKCQDPADQIVPAQRYTQICPSE*SPHIKS
Trigger: ACTTTTTATGTGGGGTGACAATTCCGAAGGGCAAAT...CTGTGTATACCTTTGGGCTGGGACAATTTGGTCAGCTGGGTCTTGGCACTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR CAA 90 bp ATGTATCCTTTTGGGTTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGTCCACCACAGGCTACTaGGATCACCTTCTCCGGAAT +
Preference number: 5 (lower is better)
Translates to: MYPFGFSLYSQMARSSRLSTTGY*DHLLRN
Trigger: ATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGGA...CAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAACCCAAAAGGATACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp GAGTGCCCGTTATATGCAAGGCATTTAAATTGTCTGACTGGCCATAATCGGGTCCAAGAGTCCCTTCTATaGGAGGTAGTGTTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: ECPLYARHLNCLTGHNRVQESLL*EVVFSS
Trigger: TGAGGAGAACACTACCTCCAATAGAAGGGACTCTTG...GACCCGATTATGGCCAGTCAGACAATTTAAATGCCTTGCATATAACGGGCACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR CAA 90 bp GGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGTTTTGCTGTAGAGGACGGTTaGGTCGGGGCTAAAGCAGCT +
Preference number: 5 (lower is better)
Translates to: GFLMNCYLHHQACILLGFAVEDG*VGAKAA
Trigger: AGCTGCTTTAGCCCCGACCAAACCGTCCTCTACAGC...AAAACCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000474584.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp GAGTGCCCGTTATATGCAAGGCATTTAAATTGTCTGACTGGCCATAATCGGGTCTTGACACATGTTGGCTaGCTGATGGCTGACTTTGAT +
Preference number: 5 (lower is better)
Translates to: ECPLYARHLNCLTGHNRVLTHVG*LMADFD
Trigger: ATCAAAGTCAGCCATCAGCAAGCCAACATGTGTCAA...GACCCGATTATGGCCAGTCAGACAATTTAAATGCCTTGCATATAACGGGCACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR CAA 90 bp GTAGGAACACTTTCATCATCTCCCACAGTTTTCTTCTTGCTTTCCACATTTTCACATTGCCTCCTTCTGTaGACACCAGGGTGTGGTTCC +
Preference number: 5 (lower is better)
Translates to: VGTLSSSPTVFFLLSTFSHCLLL*TPGCGS
Trigger: GGAACCACACCCTGGTGTCAACAGAAGGAGGCAATG...TGAAAATGTGGAAAGCAAGAAGAAAACTGTGGGAGATGATGAAAGTGTTCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp ATCTTCTCTCTGTATTTGTTGGTGGGATATTCTGATGATTCTGACTCATGTGGTCATTGCCTCCTTCTGTaGACACCAGGGTGTGGTTCC +
Preference number: 5 (lower is better)
Translates to: IFSLYLLVGYSDDSDSCGHCLLL*TPGCGS
Trigger: GGAACCACACCCTGGTGTCAACAGAAGGAGGCAATG...ACCACATGAGTCAGAATCATCAGAATATCCCACCAACAAATACAGAGAGAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp GAAAAGTGCCAAGACCCAGCTGACCAAATTGTCCCAGCCCAAAGGTATACACAGCATTATTTCCACCAGTaGCATATACATTGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: EKCQDPADQIVPAQRYTQHYFHQ*HIHCLL
Trigger: AAGGAGGCAATGTATATGCAACTGGTGGAAATAATG...CTGTGTATACCTTTGGGCTGGGACAATTTGGTCAGCTGGGTCTTGGCACTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR CAA 90 bp CCAAAATTTACCAGTGCCTCCTATTGTCTTTGGCTCCTTAACACAGCTGCATCATTTCCCAATGGTCACTaGCTGAGGGACACAGACATT +
Preference number: 5 (lower is better)
Translates to: PKFTSASYCLWLLNTAASFPNGH*LRDTDI
Trigger: AATGTCTGTGTCCCTCAGCAAGTGACCATTGGGAAA...TGATGCAGCTGTGTTAAGGAGCCAAAGACAATAGGAGGCACTGGTAAATTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR CAA 90 bp TTCTCAAGAACACTGATACTTGATCATGGGCAGGTCATCTTCTCTGAAAGCTTCACCCAGCTGACCAAATaGTCCCAGCCCAAAGGTATA +
Preference number: 5 (lower is better)
Translates to: FSRTLILDHGQVIFSESFTQLTK*SQPKGI
Trigger: TATACCTTTGGGCTGGGACAATTTGGTCAGCTGGGT...GAAGCTTTCAGAGAAGATGACCTGCCCATGATCAAGTATCAGTGTTCTTGAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647261.1
CDS-3UTR CAA 90 bp TCCTCATCTGAAAATGCTTCGATAGTCGTAGCTGGCTGCGTCATGAAAATCCCTCGTGGAAAGACTGAATaGGGGAGAAAACAAGCAGAA +
Preference number: 5 (lower is better)
Translates to: SSSENASIVVAGCVMKIPRGKTE*GRKQAE
Trigger: TTCTGCTTGTTTTCTCCCCAATTCAGTCTTTCCACG...AGGGATTTTCATGACGCAGCCAGCTACGACTATCGAAGCATTTTCAGATGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000646020.1
CDS-3UTR CAA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATGCTGTAGAGGACGGTTaGGTCGGGGCTAAAGCAGCT +
Preference number: 5 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYAVEDG*VGAKAA
Trigger: AGCTGCTTTAGCCCCGACCAAACCGTCCTCTACAGC...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000339363.7
ENST00000642395.2
CDS-3UTR CAA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTGCTGTAGAGGACGGTTaGGTCGGGGCTAAAGCAGCT +
Preference number: 5 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFAVEDG*VGAKAA
Trigger: AGCTGCTTTAGCCCCGACCAAACCGTCCTCTACAGC...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000339363.7
ENST00000642395.2
CDS-3UTR CAA 90 bp TATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTTCATTGCCTCCTTCTGTaGACACCAGGGTGTGGTTCC +
Preference number: 5 (lower is better)
Translates to: YSDDSDSCGSGRHLYYHFHCLLL*TPGCGS
Trigger: GGAACCACACCCTGGTGTCAACAGAAGGAGGCAATG...AAAGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp TGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCCCAGTTGCATATACATaGCCTCCTTCTGTTGACACC +
Preference number: 5 (lower is better)
Translates to: WSPMDFISGSGSLLFLTIPVAYT*PPSVDT
Trigger: GGTGTCAACAGAAGGAGGCAATGTATATGCAACTGG...GATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp TGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTTCCCAATGGTCACTaGCTGAGGGACACAGACATT +
Preference number: 5 (lower is better)
Translates to: WSPMDFISGSGSLLFLTIFPNGH*LRDTDI
Trigger: AATGTCTGTGTCCCTCAGCAAGTGACCATTGGGAAA...GATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp TTTGGGTTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCTTTTTCTTTTCCCAATGGTCACTaGCTGAGGGACACAGACATT +
Preference number: 5 (lower is better)
Translates to: FGFSLYSQMARSSRLAFSFPNGH*LRDTDI
Trigger: AATGTCTGTGTCCCTCAGCAAGTGACCATTGGGAAA...AGAAAAAGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAACCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp TTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCTTTTTCTTTCTTTTTCCACCACAGGCTACTaGGATCACCTTCTCCGGAAT +
Preference number: 5 (lower is better)
Translates to: FHCTHKWPVPLGWLFLSFSTTGY*DHLLRN
Trigger: ATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGGA...AAAAGAAAGAAAAAGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp ATGTATCCTTTTGGGTTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGCAAGAGTCCCTTCTATaGGAGGTAGTGTTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: MYPFGFSLYSQMARSSRLQESLL*EVVFSS
Trigger: TGAGGAGAACACTACCTCCAATAGAAGGGACTCTTG...CAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAACCCAAAAGGATACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp TGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCCAAGAGTCCCTTCTATaGGAGGTAGTGTTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: WSPMDFISGSGSLLFLTIQESLL*EVVFSS
Trigger: TGAGGAGAACACTACCTCCAATAGAAGGGACTCTTG...GATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp ACCAGTGCCTCCTATTGTCTTTGGCTCCTTAACACAGCTGCATCAGTTGCTTTTTTATTCCAGAACTTTTaGGAACCTGATGGCCCGTTT +
Preference number: 5 (lower is better)
Translates to: TSASYCLWLLNTAASVAFLFQNF*EPDGPF
Trigger: AAACGGGCCATCAGGTTCCAAAAAGTTCTGGAATAA...AAAAGCAACTGATGCAGCTGTGTTAAGGAGCCAAAGACAATAGGAGGCACTGGT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS TCA 90 bp ACTTTGGGTTCTGAAGTTTCAAAAAGAAAAGTGCCAAGACCCAGCTaGCCAAATTGTCCCAGCCCAAAGGTATACACAGCATTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: TLGSEVSKRKVPRPS*PNCPSPKVYTAFSE
Trigger: TTCAGAGAATGCTGTGTATACCTTTGGGCTGGGACAATTTGGTCAGCTGGGTCTTGGCACTTTTCTTTTTGAAACTTCAGAACCCAAAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000494841.1
CDS-3UTR CAA 90 bp TGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTGACACATGTTGGCTaGCTGATGGCTGACTTTGAT +
Preference number: 5 (lower is better)
Translates to: WSPMDFISGSGSLLFLTILTHVG*LMADFD
Trigger: ATCAAAGTCAGCCATCAGCAAGCCAACATGTGTCAA...GATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTCATTGCCTCCTTCTGTaGACACCAGGGTGTGGTTCC +
Preference number: 5 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFHCLLL*TPGCGS
Trigger: GGAACCACACCCTGGTGTCAACAGAAGGAGGCAATG...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATCATTGCCTCCTTCTGTaGACACCAGGGTGTGGTTCC +
Preference number: 5 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYHCLLL*TPGCGS
Trigger: GGAACCACACCCTGGTGTCAACAGAAGGAGGCAATG...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp GAAATTACAGAACAGTCAGTGAATACATTGAGGGCATATAACACATACCAGAAACATTGCCTCCTTCTGTaGACACCAGGGTGTGGTTCC +
Preference number: 5 (lower is better)
Translates to: EITEQSVNTLRAYNTYQKHCLLL*TPGCGS
Trigger: GGAACCACACCCTGGTGTCAACAGAAGGAGGCAATG...TTTCTGGTATGTGTTATATGCCCTCAATGTATTCACTGACTGTTCTGTAATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR CAA 90 bp GATACATTCTCAAGAACACTGATACTTGATCATGGGCAGGTCATCTTCTCTGAACCAGTTGCATATACATaGCCTCCTTCTGTTGACACC +
Preference number: 5 (lower is better)
Translates to: DTFSRTLILDHGQVIFSEPVAYT*PPSVDT
Trigger: GGTGTCAACAGAAGGAGGCAATGTATATGCAACTGG...TTCAGAGAAGATGACCTGCCCATGATCAAGTATCAGTGTTCTTGAGAATGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647261.1
CDS-3UTR CAA 90 bp CCAAAATTTACCAGTGCCTCCTATTGTCTTTGGCTCCTTAACACAGCTGCATCAATTTGCCCTTCGGAATaGTCACCCCACATAAAAAGT +
Preference number: 5 (lower is better)
Translates to: PKFTSASYCLWLLNTAASICPSE*SPHIKS
Trigger: ACTTTTTATGTGGGGTGACAATTCCGAAGGGCAAAT...TGATGCAGCTGTGTTAAGGAGCCAAAGACAATAGGAGGCACTGGTAAATTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR CAA 90 bp AGAACACTGATACTTGATCATGGGCAGGTCATCTTCTCTGAAAGCTTCTTTGGGATTTGCCCTTCGGAATaGTCACCCCACATAAAAAGT +
Preference number: 5 (lower is better)
Translates to: RTLILDHGQVIFSESFFGICPSE*SPHIKS
Trigger: ACTTTTTATGTGGGGTGACAATTCCGAAGGGCAAAT...CCCAAAGAAGCTTTCAGAGAAGATGACCTGCCCATGATCAAGTATCAGTGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647261.1
CDS-3UTR CAA 90 bp GTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTTTTCCCAATGGTCACTaGCTGAGGGACACAGACATT +
Preference number: 5 (lower is better)
Translates to: VSYGFYLWERLIVILDNLFPNGH*LRDTDI
Trigger: AATGTCTGTGTCCCTCAGCAAGTGACCATTGGGAAA...AAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp GATACATTCTCAAGAACACTGATACTTGATCATGGGCAGGTCATCTTCTCTGAATTTCCCAATGGTCACTaGCTGAGGGACACAGACATT +
Preference number: 5 (lower is better)
Translates to: DTFSRTLILDHGQVIFSEFPNGH*LRDTDI
Trigger: AATGTCTGTGTCCCTCAGCAAGTGACCATTGGGAAA...TTCAGAGAAGATGACCTGCCCATGATCAAGTATCAGTGTTCTTGAGAATGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647261.1
CDS-3UTR CAA 90 bp ATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTTTTCCACCACAGGCTACTaGGATCACCTTCTCCGGAAT +
Preference number: 5 (lower is better)
Translates to: ILMILTHVVLVGIFIITFSTTGY*DHLLRN
Trigger: ATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGGA...AAAAGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp GGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGTTTTTCCACCACAGGCTACTaGGATCACCTTCTCCGGAAT +
Preference number: 5 (lower is better)
Translates to: GFLMNCYLHHQACILLGFSTTGY*DHLLRN
Trigger: ATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGGA...AAAACCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp TCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGACCCAGCTGACCAAATaGTCCCAGCCCAAAGGTATA +
Preference number: 5 (lower is better)
Translates to: SRISNELLSASSSMYPFGTQLTK*SQPKGI
Trigger: TATACCTTTGGGCTGGGACAATTTGGTCAGCTGGGT...CCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp TCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTTTGACCCAGCTGACCAAATaGTCCCAGCCCAAAGGTATA +
Preference number: 5 (lower is better)
Translates to: SYGFYLWERLIVILDNLLTQLTK*SQPKGI
Trigger: TATACCTTTGGGCTGGGACAATTTGGTCAGCTGGGT...CAAAAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp TCTTCTCTCTGTATTTGTTGGTGGGATATTCTGATGATTCTGACTCATGTGGTTACCCAGCTGACCAAATaGTCCCAGCCCAAAGGTATA +
Preference number: 5 (lower is better)
Translates to: SSLCICWWDILMILTHVVTQLTK*SQPKGI
Trigger: TATACCTTTGGGCTGGGACAATTTGGTCAGCTGGGT...AACCACATGAGTCAGAATCATCAGAATATCCCACCAACAAATACAGAGAGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp CTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCGAATTCAATTTCTTTaGCCACACCACGATGAGGAG +
Preference number: 5 (lower is better)
Translates to: LVSYGFYLWERLIVILDNRIQFL*PHHDEE
Trigger: CTCCTCATCGTGGTGTGGCAAAAGAAATTGAATTCG...ATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp GGAACACTTTCATCATCTCCCACAGTTTTCTTCTTGCTTTCCACATTTTCAGCACAAGAGTCCCTTCTATaGGAGGTAGTGTTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: GTLSSSPTVFFLLSTFSAQESLL*EVVFSS
Trigger: TGAGGAGAACACTACCTCCAATAGAAGGGACTCTTG...TGCTGAAAATGTGGAAAGCAAGAAGAAAACTGTGGGAGATGATGAAAGTGTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp TTTGGGTTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCTTTTTCTCGTGGAAAGACTGAATaGGGGAGAAAACAAGCAGAA +
Preference number: 5 (lower is better)
Translates to: FGFSLYSQMARSSRLAFSRGKTE*GRKQAE
Trigger: TTCTGCTTGTTTTCTCCCCAATTCAGTCTTTCCACG...AGAAAAAGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAACCCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp TGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCCGTGGAAAGACTGAATaGGGGAGAAAACAAGCAGAA +
Preference number: 5 (lower is better)
Translates to: WSPMDFISGSGSLLFLTIRGKTE*GRKQAE
Trigger: TTCTGCTTGTTTTCTCCCCAATTCAGTCTTTCCACG...GATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp ATGTATCCTTTTGGGTTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGCGTGGAAAGACTGAATaGGGGAGAAAACAAGCAGAA +
Preference number: 5 (lower is better)
Translates to: MYPFGFSLYSQMARSSRLRGKTE*GRKQAE
Trigger: TTCTGCTTGTTTTCTCCCCAATTCAGTCTTTCCACG...CAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAACCCAAAAGGATACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS GCA 90 bp TTACCTACTTCCTCATCTGAAAATGCTTCGATAGTCGTAGCTGGCTaGGTCATGAAAATCCCTTGTGACACATGTTGTTTACATGCTTTC +
Preference number: 5 (lower is better)
Translates to: LPTSSSENASIVVAG*VMKIPCDTCCLHAF
Trigger: GAAAGCATGTAAACAACATGTGTCACAAGGGATTTTCATGACGCAGCCAGCTACGACTATCGAAGCATTTTCAGATGAGGAAGTAGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS GCA 90 bp ATCTCTACTTCCTCATCTGAAAATGCTTCGATAGTCGTAGCTGGCTaGGTCATGAAAATCCCTTGTGACACATGTTGTTTACATGCTTTC +
Preference number: 5 (lower is better)
Translates to: ISTSSSENASIVVAG*VMKIPCDTCCLHAF
Trigger: GAAAGCATGTAAACAACATGTGTCACAAGGGATTTTCATGACGCAGCCAGCTACGACTATCGAAGCATTTTCAGATGAGGAAGTAGAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000482855.5
ENST00000642395.2
ENST00000644337.1
ENST00000645032.1
CDS-3UTR CAA 90 bp GATACATTCTCAAGAACACTGATACTTGATCATGGGCAGGTCATCTTCTCTGAATTGACACATGTTGGCTaGCTGATGGCTGACTTTGAT +
Preference number: 5 (lower is better)
Translates to: DTFSRTLILDHGQVIFSELTHVG*LMADFD
Trigger: ATCAAAGTCAGCCATCAGCAAGCCAACATGTGTCAA...TTCAGAGAAGATGACCTGCCCATGATCAAGTATCAGTGTTCTTGAGAATGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647261.1
CDS-3UTR CAA 90 bp CTTTGGGTTCTGAAGTTTCAAAAAGAAAAGTGCCAAGACCCAGCTGACCAAATTTCAGGTTTTAGAGCTTaGACACATGTTGGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: LWVLKFQKEKCQDPADQISGFRA*THVGLL
Trigger: CAGCAAGCCAACATGTGTCAAAGCTCTAAAACCTGA...AATTTGGTCAGCTGGGTCTTGGCACTTTTCTTTTTGAAACTTCAGAACCCAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR CAA 90 bp AAAATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTCAGGTTTTAGAGCTTaGACACATGTTGGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: KMIWSPMDFISGSGSLLFSGFRA*THVGLL
Trigger: CAGCAAGCCAACATGTGTCAAAGCTCTAAAACCTGA...GAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp GATACATTCTCAAGAACACTGATACTTGATCATGGGCAGGTCATCTTCTCTGAATCAGGTTTTAGAGCTTaGACACATGTTGGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: DTFSRTLILDHGQVIFSESGFRA*THVGLL
Trigger: CAGCAAGCCAACATGTGTCAAAGCTCTAAAACCTGA...TTCAGAGAAGATGACCTGCCCATGATCAAGTATCAGTGTTCTTGAGAATGTATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647261.1
CDS-3UTR CAA 90 bp TCTTCTCTCTGTATTTGTTGGTGGGATATTCTGATGATTCTGACTCATGTGGTTCCAGTTGCATATACATaGCCTCCTTCTGTTGACACC +
Preference number: 5 (lower is better)
Translates to: SSLCICWWDILMILTHVVPVAYT*PPSVDT
Trigger: GGTGTCAACAGAAGGAGGCAATGTATATGCAACTGG...AACCACATGAGTCAGAATCATCAGAATATCCCACCAACAAATACAGAGAGAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp GTAGGAACACTTTCATCATCTCCCACAGTTTTCTTCTTGCTTTCCACATTTTCACCAGTTGCATATACATaGCCTCCTTCTGTTGACACC +
Preference number: 5 (lower is better)
Translates to: VGTLSSSPTVFFLLSTFSPVAYT*PPSVDT
Trigger: GGTGTCAACAGAAGGAGGCAATGTATATGCAACTGG...TGAAAATGTGGAAAGCAAGAAGAAAACTGTGGGAGATGATGAAAGTGTTCCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp AGAACACTGATACTTGATCATGGGCAGGTCATCTTCTCTGAAAGCTTCTTTGGGCATTATTTCCACCAGTaGCATATACATTGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: RTLILDHGQVIFSESFFGHYFHQ*HIHCLL
Trigger: AAGGAGGCAATGTATATGCAACTGGTGGAAATAATG...CCCAAAGAAGCTTTCAGAGAAGATGACCTGCCCATGATCAAGTATCAGTGTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647261.1
CDS-3UTR CAA 90 bp TTTGGGTTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCTTTTTCTATTTGCCCTTCGGAATaGTCACCCCACATAAAAAGT +
Preference number: 5 (lower is better)
Translates to: FGFSLYSQMARSSRLAFSICPSE*SPHIKS
Trigger: ACTTTTTATGTGGGGTGACAATTCCGAAGGGCAAAT...AGAAAAAGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAACCCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp GATATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTTTCCCAATGGTCACTaGCTGAGGGACACAGACATT +
Preference number: 5 (lower is better)
Translates to: DILMILTHVVLVGIFIITFPNGH*LRDTDI
Trigger: AATGTCTGTGTCCCTCAGCAAGTGACCATTGGGAAA...AGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAATATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp CCAAAATTTACCAGTGCCTCCTATTGTCTTTGGCTCCTTAACACAGCTGCATCAATAGCTCACCATCTGTaGTTACAAAAGCTGAATGGT +
Preference number: 5 (lower is better)
Translates to: PKFTSASYCLWLLNTAASIAHHL*LQKLNG
Trigger: ACCATTCAGCTTTTGTAACAACAGATGGTGAGCTAT...TGATGCAGCTGTGTTAAGGAGCCAAAGACAATAGGAGGCACTGGTAAATTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR CAA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTTCCACCACAGGCTACTaGGATCACCTTCTCCGGAAT +
Preference number: 5 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFSTTGY*DHLLRN
Trigger: ATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGGA...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTCCACCACAGGCTACTaGGATCACCTTCTCCGGAAT +
Preference number: 5 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYSTTGY*DHLLRN
Trigger: ATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGGA...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp GAAATTACAGAACAGTCAGTGAATACATTGAGGGCATATAACACATACCAGAAATCCACCACAGGCTACTaGGATCACCTTCTCCGGAAT +
Preference number: 5 (lower is better)
Translates to: EITEQSVNTLRAYNTYQKSTTGY*DHLLRN
Trigger: ATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGGA...TTTCTGGTATGTGTTATATGCCCTCAATGTATTCACTGACTGTTCTGTAATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR CAA 90 bp AGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGTTTACCCAGCTGACCAAATaGTCCCAGCCCAAAGGTATA +
Preference number: 5 (lower is better)
Translates to: RISNELLSASSSMYPFGFTQLTK*SQPKGI
Trigger: TATACCTTTGGGCTGGGACAATTTGGTCAGCTGGGT...AAACCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp TTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCTTTTTCTTTCTTTCAAGAGTCCCTTCTATaGGAGGTAGTGTTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: FSLYSQMARSSRLAFSFFQESLL*EVVFSS
Trigger: TGAGGAGAACACTACCTCCAATAGAAGGGACTCTTG...AAAGAAAGAAAAAGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp AAAATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCCCTTTTGGGTTTTCATaGTACTCACAAATGGCCCGT +
Preference number: 5 (lower is better)
Translates to: KMIWSPMDFISGSGSLLFPFGFS*YSQMAR
Trigger: ACGGGCCATTTGTGAGTACAATGAAAACCCAAAAGG...GAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp GGAACACTTTCATCATCTCCCACAGTTTTCTTCTTGCTTTCCACATTTTCAGCACCTTTTGGGTTTTCATaGTACTCACAAATGGCCCGT +
Preference number: 5 (lower is better)
Translates to: GTLSSSPTVFFLLSTFSAPFGFS*YSQMAR
Trigger: ACGGGCCATTTGTGAGTACAATGAAAACCCAAAAGG...TGCTGAAAATGTGGAAAGCAAGAAGAAAACTGTGGGAGATGATGAAAGTGTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp TTTAAAATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATCCTTCAAAAATTATTaGCCATTGGCCGGGCGTGGT +
Preference number: 5 (lower is better)
Translates to: FKMIWSPMDFISGSGSLLSFKNY*PLAGRG
Trigger: ACCACGCCCGGCCAATGGCAAATAATTTTTGAAGGA...TAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000646020.1
CDS-3UTR CAA 90 bp TTTAAAATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATCAGGTTTTAGAGCTTaGACACATGTTGGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: FKMIWSPMDFISGSGSLLSGFRA*THVGLL
Trigger: CAGCAAGCCAACATGTGTCAAAGCTCTAAAACCTGA...TAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp GTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTATTTGCCCTTCGGAATaGTCACCCCACATAAAAAGT +
Preference number: 5 (lower is better)
Translates to: VSYGFYLWERLIVILDNLICPSE*SPHIKS
Trigger: ACTTTTTATGTGGGGTGACAATTCCGAAGGGCAAAT...AAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp AGGAACACTTTCATCATCTCCCACAGTTTTCTTCTTGCTTTCCACATTTTCAGCATTTGCCCTTCGGAATaGTCACCCCACATAAAAAGT +
Preference number: 5 (lower is better)
Translates to: RNTFIISHSFLLAFHIFSICPSE*SPHIKS
Trigger: ACTTTTTATGTGGGGTGACAATTCCGAAGGGCAAAT...GCTGAAAATGTGGAAAGCAAGAAGAAAACTGTGGGAGATGATGAAAGTGTTCCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp CACTGTTTTCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCTTTCCCAATGGTCACTaGCTGAGGGACACAGACATT +
Preference number: 5 (lower is better)
Translates to: HCFLGFLMNCYLHHQACIFPNGH*LRDTDI
Trigger: AATGTCTGTGTCCCTCAGCAAGTGACCATTGGGAAA...GATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGAAAACAGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp TGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCATAGCTCACCATCTGTaGTTACAAAAGCTGAATGGT +
Preference number: 5 (lower is better)
Translates to: WSPMDFISGSGSLLFLTIIAHHL*LQKLNG
Trigger: ACCATTCAGCTTTTGTAACAACAGATGGTGAGCTAT...GATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp TTCTCAAGAACACTGATACTTGATCATGGGCAGGTCATCTTCTCTGAAAGCTTCATAGCTCACCATCTGTaGTTACAAAAGCTGAATGGT +
Preference number: 5 (lower is better)
Translates to: FSRTLILDHGQVIFSESFIAHHL*LQKLNG
Trigger: ACCATTCAGCTTTTGTAACAACAGATGGTGAGCTAT...GAAGCTTTCAGAGAAGATGACCTGCCCATGATCAAGTATCAGTGTTCTTGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647261.1
CDS-3UTR CAA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATACCCAGCTGACCAAATaGTCCCAGCCCAAAGGTATA +
Preference number: 5 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYTQLTK*SQPKGI
Trigger: TATACCTTTGGGCTGGGACAATTTGGTCAGCTGGGT...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp TTTCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGACCCAGCTGACCAAATaGTCCCAGCCCAAAGGTATA +
Preference number: 5 (lower is better)
Translates to: FLGFLMNCYLHHQACILLTQLTK*SQPKGI
Trigger: TATACCTTTGGGCTGGGACAATTTGGTCAGCTGGGT...CAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTACCCAGCTGACCAAATaGTCCCAGCCCAAAGGTATA +
Preference number: 5 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFTQLTK*SQPKGI
Trigger: TATACCTTTGGGCTGGGACAATTTGGTCAGCTGGGT...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp GAAATTACAGAACAGTCAGTGAATACATTGAGGGCATATAACACATACCAGAAAACCCAGCTGACCAAATaGTCCCAGCCCAAAGGTATA +
Preference number: 5 (lower is better)
Translates to: EITEQSVNTLRAYNTYQKTQLTK*SQPKGI
Trigger: TATACCTTTGGGCTGGGACAATTTGGTCAGCTGGGT...TTTCTGGTATGTGTTATATGCCCTCAATGTATTCACTGACTGTTCTGTAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR CAA 90 bp GTAGGAACACTTTCATCATCTCCCACAGTTTTCTTCTTGCTTTCCACATTTTCACGAATTCAATTTCTTTaGCCACACCACGATGAGGAG +
Preference number: 5 (lower is better)
Translates to: VGTLSSSPTVFFLLSTFSRIQFL*PHHDEE
Trigger: CTCCTCATCGTGGTGTGGCAAAAGAAATTGAATTCG...TGAAAATGTGGAAAGCAAGAAGAAAACTGTGGGAGATGATGAAAGTGTTCCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp GGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGTTTTCAAGAGTCCCTTCTATaGGAGGTAGTGTTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: GFLMNCYLHHQACILLGFQESLL*EVVFSS
Trigger: TGAGGAGAACACTACCTCCAATAGAAGGGACTCTTG...AAAACCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp TTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCTTTTTCTTTCTTTTCCTTTTGGGTTTTCATaGTACTCACAAATGGCCCGT +
Preference number: 5 (lower is better)
Translates to: FHCTHKWPVPLGWLFLSFPFGFS*YSQMAR
Trigger: ACGGGCCATTTGTGAGTACAATGAAAACCCAAAAGG...AAAAGAAAGAAAAAGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp TTTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCTTTTTCTTTCTTTCCTTTTGGGTTTTCATaGTACTCACAAATGGCCCGT +
Preference number: 5 (lower is better)
Translates to: FSLYSQMARSSRLAFSFFPFGFS*YSQMAR
Trigger: ACGGGCCATTTGTGAGTACAATGAAAACCCAAAAGG...AAAGAAAGAAAAAGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp TATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTTTTGACACATGTTGGCTaGCTGATGGCTGACTTTGAT +
Preference number: 5 (lower is better)
Translates to: YSDDSDSCGSGRHLYYHFLTHVG*LMADFD
Trigger: ATCAAAGTCAGCCATCAGCAAGCCAACATGTGTCAA...AAAGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp GGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGTTTTTTGACACATGTTGGCTaGCTGATGGCTGACTTTGAT +
Preference number: 5 (lower is better)
Translates to: GFLMNCYLHHQACILLGFLTHVG*LMADFD
Trigger: ATCAAAGTCAGCCATCAGCAAGCCAACATGTGTCAA...AAAACCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp GGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGTTTTTCAGGTTTTAGAGCTTaGACACATGTTGGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: GFLMNCYLHHQACILLGFSGFRA*THVGLL
Trigger: CAGCAAGCCAACATGTGTCAAAGCTCTAAAACCTGA...AAAACCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp AGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGTTTTCAGGTTTTAGAGCTTaGACACATGTTGGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: RISNELLSASSSMYPFGFSGFRA*THVGLL
Trigger: CAGCAAGCCAACATGTGTCAAAGCTCTAAAACCTGA...AAACCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATCCAGTTGCATATACATaGCCTCCTTCTGTTGACACC +
Preference number: 5 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYPVAYT*PPSVDT
Trigger: GGTGTCAACAGAAGGAGGCAATGTATATGCAACTGG...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp GGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTTTGATTTATCCAGTTGCATATACATaGCCTCCTTCTGTTGACACC +
Preference number: 5 (lower is better)
Translates to: GFYLWERLIVILDNLLIYPVAYT*PPSVDT
Trigger: GGTGTCAACAGAAGGAGGCAATGTATATGCAACTGG...ATAAATCAAAAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTCCAGTTGCATATACATaGCCTCCTTCTGTTGACACC +
Preference number: 5 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFPVAYT*PPSVDT
Trigger: GGTGTCAACAGAAGGAGGCAATGTATATGCAACTGG...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp AGGAACACTTTCATCATCTCCCACAGTTTTCTTCTTGCTTTCCACATTTTCAGCCATTATTTCCACCAGTaGCATATACATTGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: RNTFIISHSFLLAFHIFSHYFHQ*HIHCLL
Trigger: AAGGAGGCAATGTATATGCAACTGGTGGAAATAATG...GCTGAAAATGTGGAAAGCAAGAAGAAAACTGTGGGAGATGATGAAAGTGTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp AATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTCATTATTTCCACCAGTaGCATATACATTGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: NDLVSYGFYLWERLIVILHYFHQ*HIHCLL
Trigger: AAGGAGGCAATGTATATGCAACTGGTGGAAATAATG...AAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp AAAATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCCATTATTTCCACCAGTaGCATATACATTGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: KMIWSPMDFISGSGSLLFHYFHQ*HIHCLL
Trigger: AAGGAGGCAATGTATATGCAACTGGTGGAAATAATG...GAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp CGTAATGAGTGCCCGTTATATGCAAGGCATTTAAATTGTCTGACTGGCCATAATCATTATTTCCACCAGTaGCATATACATTGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: RNECPLYARHLNCLTGHNHYFHQ*HIHCLL
Trigger: AAGGAGGCAATGTATATGCAACTGGTGGAAATAATG...ATTATGGCCAGTCAGACAATTTAAATGCCTTGCATATAACGGGCACTCATTACG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR CAA 90 bp GATATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTATTTGCCCTTCGGAATaGTCACCCCACATAAAAAGT +
Preference number: 5 (lower is better)
Translates to: DILMILTHVVLVGIFIITICPSE*SPHIKS
Trigger: ACTTTTTATGTGGGGTGACAATTCCGAAGGGCAAAT...AGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTCCCAATGGTCACTaGCTGAGGGACACAGACATT +
Preference number: 5 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYFPNGH*LRDTDI
Trigger: AATGTCTGTGTCCCTCAGCAAGTGACCATTGGGAAA...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTTTTCCCAATGGTCACTaGCTGAGGGACACAGACATT +
Preference number: 5 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFFPNGH*LRDTDI
Trigger: AATGTCTGTGTCCCTCAGCAAGTGACCATTGGGAAA...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp CTTTGGGTTCTGAAGTTTCAAAAAGAAAAGTGCCAAGACCCAGCTGACCAAATTATAGCTCACCATCTGTaGTTACAAAAGCTGAATGGT +
Preference number: 5 (lower is better)
Translates to: LWVLKFQKEKCQDPADQIIAHHL*LQKLNG
Trigger: ACCATTCAGCTTTTGTAACAACAGATGGTGAGCTAT...AATTTGGTCAGCTGGGTCTTGGCACTTTTCTTTTTGAAACTTCAGAACCCAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000642373.1
CDS-3UTR CAA 90 bp AAAATGATCTGGTCTCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCATAGCTCACCATCTGTaGTTACAAAAGCTGAATGGT +
Preference number: 5 (lower is better)
Translates to: KMIWSPMDFISGSGSLLFIAHHL*LQKLNG
Trigger: ACCATTCAGCTTTTGTAACAACAGATGGTGAGCTAT...GAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGAGACCAGATCATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp TATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTTCGAATTCAATTTCTTTaGCCACACCACGATGAGGAG +
Preference number: 5 (lower is better)
Translates to: YSDDSDSCGSGRHLYYHFRIQFL*PHHDEE
Trigger: CTCCTCATCGTGGTGTGGCAAAAGAAATTGAATTCG...AAAGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp CACTGTTTTCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCGAATTCAATTTCTTTaGCCACACCACGATGAGGAG +
Preference number: 5 (lower is better)
Translates to: HCFLGFLMNCYLHHQACIRIQFL*PHHDEE
Trigger: CTCCTCATCGTGGTGTGGCAAAAGAAATTGAATTCG...GATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGAAAACAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp GGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGTTTTCGAATTCAATTTCTTTaGCCACACCACGATGAGGAG +
Preference number: 5 (lower is better)
Translates to: GFLMNCYLHHQACILLGFRIQFL*PHHDEE
Trigger: CTCCTCATCGTGGTGTGGCAAAAGAAATTGAATTCG...AAAACCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTCAAGAGTCCCTTCTATaGGAGGTAGTGTTCTCCTCA +
Preference number: 5 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFQESLL*EVVFSS
Trigger: TGAGGAGAACACTACCTCCAATAGAAGGGACTCTTG...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp TATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTTCGTGGAAAGACTGAATaGGGGAGAAAACAAGCAGAA +
Preference number: 5 (lower is better)
Translates to: YSDDSDSCGSGRHLYYHFRGKTE*GRKQAE
Trigger: TTCTGCTTGTTTTCTCCCCAATTCAGTCTTTCCACG...AAAGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATCCTGTTGACTCTCACTaGCACCTTCCATGTAACTGT +
Preference number: 5 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYPVDSH*HLPCNC
Trigger: ACAGTTACATGGAAGGTGCAAGTGAGAGTCAACAGG...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS-3UTR CAA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATATCAGCTATACCCTGTaGACTCTCACTTGCACCTTC +
Preference number: 5 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYISYTL*TLTCTF
Trigger: GAAGGTGCAAGTGAGAGTCAACAGGGTATAGCTGAT...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS-3UTR CAA 90 bp GTAGGAACACTTTCATCATCTCCCACAGTTTTCTTCTTGCTTTCCACATTTTCATCTGGGAGCGGCTCATaGTTATTCTTGACAATCTTT +
Preference number: 5 (lower is better)
Translates to: VGTLSSSPTVFFLLSTFSSGSGS*LFLTIF
Trigger: AAAGATTGTCAAGAATAACAATGAGCCGCTCCCAGA...TGAAAATGTGGAAAGCAAGAAGAAAACTGTGGGAGATGATGAAAGTGTTCCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp TCCTATGGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTTTGTCTGGGAGCGGCTCATaGTTATTCTTGACAATCTTT +
Preference number: 5 (lower is better)
Translates to: SYGFYLWERLIVILDNLLSGSGS*LFLTIF
Trigger: AAAGATTGTCAAGAATAACAATGAGCCGCTCCCAGA...CAAAAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCCATAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp ATCTTCTCTCTGTATTTGTTGGTGGGATATTCTGATGATTCTGACTCATGTGGTGCAGAATACTCTGCTTaGTCTGTAAGGTCATCTGAT +
Preference number: 5 (lower is better)
Translates to: IFSLYLLVGYSDDSDSCGAEYSA*SVRSSD
Trigger: ATCAGATGACCTTACAGACAAAGCAGAGTATTCTGC...ACCACATGAGTCAGAATCATCAGAATATCCCACCAACAAATACAGAGAGAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482855.5
CDS-3UTR CAA 90 bp GATACATTCTCAAGAACACTGATACTTGATCATGGGCAGGTCATCTTCTCTGAACAGTATATCTTGCATTaGCTGATTCCTAGTTTCCCT +
Preference number: 5 (lower is better)
Translates to: DTFSRTLILDHGQVIFSEQYILH*LIPSFP
Trigger: AGGGAAACTAGGAATCAGCAAATGCAAGATATACTG...TTCAGAGAAGATGACCTGCCCATGATCAAGTATCAGTGTTCTTGAGAATGTATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647261.1
CDS-3UTR CAA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTTTGACACATGTTGGCTaGCTGATGGCTGACTTTGAT +
Preference number: 5 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFLTHVG*LMADFD
Trigger: ATCAAAGTCAGCCATCAGCAAGCCAACATGTGTCAA...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp TTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGTTTTCATTTGACACATGTTGGCTaGCTGATGGCTGACTTTGAT +
Preference number: 5 (lower is better)
Translates to: FLMNCYLHHQACILLGFHLTHVG*LMADFD
Trigger: ATCAAAGTCAGCCATCAGCAAGCCAACATGTGTCAA...ATGAAAACCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTCAGGTTTTAGAGCTTaGACACATGTTGGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYSGFRA*THVGLL
Trigger: CAGCAAGCCAACATGTGTCAAAGCTCTAAAACCTGA...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTTCAGGTTTTAGAGCTTaGACACATGTTGGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFSGFRA*THVGLL
Trigger: CAGCAAGCCAACATGTGTCAAAGCTCTAAAACCTGA...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp GAAATTACAGAACAGTCAGTGAATACATTGAGGGCATATAACACATACCAGAAATCAGGTTTTAGAGCTTaGACACATGTTGGCTTGCTG +
Preference number: 5 (lower is better)
Translates to: EITEQSVNTLRAYNTYQKSGFRA*THVGLL
Trigger: CAGCAAGCCAACATGTGTCAAAGCTCTAAAACCTGA...TTTCTGGTATGTGTTATATGCCCTCAATGTATTCACTGACTGTTCTGTAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR CAA 90 bp TTTCATTGTACTCACAAATGGCCCGTTCCTCTAGGTTGGCTTTTTCTTTCTTTTCATTATTTCCACCAGTaGCATATACATTGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: FHCTHKWPVPLGWLFLSFHYFHQ*HIHCLL
Trigger: AAGGAGGCAATGTATATGCAACTGGTGGAAATAATG...AAAAGAAAGAAAAAGCCAACCTAGAGGAACGGGCCATTTGTGAGTACAATGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp TCTTCTCTCTGTATTTGTTGGTGGGATATTCTGATGATTCTGACTCATGTGGTTCATTATTTCCACCAGTaGCATATACATTGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: SSLCICWWDILMILTHVVHYFHQ*HIHCLL
Trigger: AAGGAGGCAATGTATATGCAACTGGTGGAAATAATG...AACCACATGAGTCAGAATCATCAGAATATCCCACCAACAAATACAGAGAGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATCGAATTCAATTTCTTTaGCCACACCACGATGAGGAG +
Preference number: 5 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYRIQFL*PHHDEE
Trigger: CTCCTCATCGTGGTGTGGCAAAAGAAATTGAATTCG...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTCGAATTCAATTTCTTTaGCCACACCACGATGAGGAG +
Preference number: 5 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFRIQFL*PHHDEE
Trigger: CTCCTCATCGTGGTGTGGCAAAAGAAATTGAATTCG...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp GAAATTACAGAACAGTCAGTGAATACATTGAGGGCATATAACACATACCAGAAACGAATTCAATTTCTTTaGCCACACCACGATGAGGAG +
Preference number: 5 (lower is better)
Translates to: EITEQSVNTLRAYNTYQKRIQFL*PHHDEE
Trigger: CTCCTCATCGTGGTGTGGCAAAAGAAATTGAATTCG...TTTCTGGTATGTGTTATATGCCCTCAATGTATTCACTGACTGTTCTGTAATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR CAA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATCGTGGAAAGACTGAATaGGGGAGAAAACAAGCAGAA +
Preference number: 5 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYRGKTE*GRKQAE
Trigger: TTCTGCTTGTTTTCTCCCCAATTCAGTCTTTCCACG...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTCGTGGAAAGACTGAATaGGGGAGAAAACAAGCAGAA +
Preference number: 5 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFRGKTE*GRKQAE
Trigger: TTCTGCTTGTTTTCTCCCCAATTCAGTCTTTCCACG...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp GAAATTACAGAACAGTCAGTGAATACATTGAGGGCATATAACACATACCAGAAACGTGGAAAGACTGAATaGGGGAGAAAACAAGCAGAA +
Preference number: 5 (lower is better)
Translates to: EITEQSVNTLRAYNTYQKRGKTE*GRKQAE
Trigger: TTCTGCTTGTTTTCTCCCCAATTCAGTCTTTCCACG...TTTCTGGTATGTGTTATATGCCCTCAATGTATTCACTGACTGTTCTGTAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR CAA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTCCTCTATCTGGTAAGTaGCCAAAGAAAGGACTCATC +
Preference number: 5 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFPLSGK*PKKGLI
Trigger: GATGAGTCCTTTCTTTGGCAACTTACCAGATAGAGG...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS-3UTR CAA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATGCCATACCGTATGTTTaGGTCAGTTTCCACTTCATC +
Preference number: 5 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYAIPYV*VSFHFI
Trigger: GATGAAGTGGAAACTGACCAAAACATACGGTATGGC...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS-3UTR CAA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTCCTTTTGGGTTTTCATaGTACTCACAAATGGCCCGT +
Preference number: 5 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFPFGFS*YSQMAR
Trigger: ACGGGCCATTTGTGAGTACAATGAAAACCCAAAAGG...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp TCTTCTCTCTGTATTTGTTGGTGGGATATTCTGATGATTCTGACTCATGTGGTTCAAGCATGTATCCTTTaGGGTTTTCATTGTACTCAC +
Preference number: 5 (lower is better)
Translates to: SSLCICWWDILMILTHVVQACIL*GFHCTH
Trigger: GTGAGTACAATGAAAACCCAAAAGGATACATGCTTG...AACCACATGAGTCAGAATCATCAGAATATCCCACCAACAAATACAGAGAGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp GATATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTGTCTTTGCTTGGTGTaGTTTCACTGTTTTCTAGGA +
Preference number: 5 (lower is better)
Translates to: DILMILTHVVLVGIFIITCLCLV*FHCFLG
Trigger: TCCTAGAAAACAGTGAAACAACACCAAGCAAAGACA...AGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAATATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp TCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGTGTCTTTGCTTGGTGTaGTTTCACTGTTTTCTAGGA +
Preference number: 5 (lower is better)
Translates to: SRISNELLSASSSMYPFGCLCLV*FHCFLG
Trigger: TCCTAGAAAACAGTGAAACAACACCAAGCAAAGACA...CCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp TATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTTTCTGGGAGCGGCTCATaGTTATTCTTGACAATCTTT +
Preference number: 5 (lower is better)
Translates to: YSDDSDSCGSGRHLYYHFSGSGS*LFLTIF
Trigger: AAAGATTGTCAAGAATAACAATGAGCCGCTCCCAGA...AAAGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp ATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTTTTCTGGGAGCGGCTCATaGTTATTCTTGACAATCTTT +
Preference number: 5 (lower is better)
Translates to: ILMILTHVVLVGIFIITFSGSGS*LFLTIF
Trigger: AAAGATTGTCAAGAATAACAATGAGCCGCTCCCAGA...AAAAGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp GAAATTACAGAACAGTCAGTGAATACATTGAGGGCATATAACACATACCAGAAATCACTCACCTCTGCTTaGTCTGTAAGGTCATCTGAT +
Preference number: 5 (lower is better)
Translates to: EITEQSVNTLRAYNTYQKSLTSA*SVRSSD
Trigger: ATCAGATGACCTTACAGACAAAGCAGAGGTGAGTGA...TTTCTGGTATGTGTTATATGCCCTCAATGTATTCACTGACTGTTCTGTAATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR CAA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATATTTGCCCTTCGGAATaGTCACCCCACATAAAAAGT +
Preference number: 5 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYICPSE*SPHIKS
Trigger: ACTTTTTATGTGGGGTGACAATTCCGAAGGGCAAAT...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp TTTCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGATTTGCCCTTCGGAATaGTCACCCCACATAAAAAGT +
Preference number: 5 (lower is better)
Translates to: FLGFLMNCYLHHQACILLICPSE*SPHIKS
Trigger: ACTTTTTATGTGGGGTGACAATTCCGAAGGGCAAAT...CAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTATTTGCCCTTCGGAATaGTCACCCCACATAAAAAGT +
Preference number: 5 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFICPSE*SPHIKS
Trigger: ACTTTTTATGTGGGGTGACAATTCCGAAGGGCAAAT...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp GGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGTTTTATAGCTCACCATCTGTaGTTACAAAAGCTGAATGGT +
Preference number: 5 (lower is better)
Translates to: GFLMNCYLHHQACILLGFIAHHL*LQKLNG
Trigger: ACCATTCAGCTTTTGTAACAACAGATGGTGAGCTAT...AAAACCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp CTGTTTTCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTATAGCTCACCATCTGTaGTTACAAAAGCTGAATGGT +
Preference number: 5 (lower is better)
Translates to: LFSRISNELLSASSSMYPIAHHL*LQKLNG
Trigger: ACCATTCAGCTTTTGTAACAACAGATGGTGAGCTAT...AGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGAAAACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp GTAGGAACACTTTCATCATCTCCCACAGTTTTCTTCTTGCTTTCCACATTTTCATCTATCTCTGCTTCTTaGGTCATTTCATCTAGCAAA +
Preference number: 5 (lower is better)
Translates to: VGTLSSSPTVFFLLSTFSSISAS*VISSSK
Trigger: TTTGCTAGATGAAATGACCAAAGAAGCAGAGATAGA...TGAAAATGTGGAAAGCAAGAAGAAAACTGTGGGAGATGATGAAAGTGTTCCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp GGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTTTGGGTTTTCAAGCATGTATCCTTTaGGGTTTTCATTGTACTCAC +
Preference number: 5 (lower is better)
Translates to: GFLMNCYLHHQACILLGFQACIL*GFHCTH
Trigger: GTGAGTACAATGAAAACCCAAAAGGATACATGCTTG...AAAACCCAAAAGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp ATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTTTCAAGCATGTATCCTTTaGGGTTTTCATTGTACTCAC +
Preference number: 5 (lower is better)
Translates to: ILMILTHVVLVGIFIITFQACIL*GFHCTH
Trigger: GTGAGTACAATGAAAACCCAAAAGGATACATGCTTG...AAAAGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp CTGTTTTCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTCAAGCATGTATCCTTTaGGGTTTTCATTGTACTCAC +
Preference number: 5 (lower is better)
Translates to: LFSRISNELLSASSSMYPQACIL*GFHCTH
Trigger: GTGAGTACAATGAAAACCCAAAAGGATACATGCTTG...AGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGAAAACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp CTGTTTTCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTGTCTTTGCTTGGTGTaGTTTCACTGTTTTCTAGGA +
Preference number: 5 (lower is better)
Translates to: LFSRISNELLSASSSMYPCLCLV*FHCFLG
Trigger: TCCTAGAAAACAGTGAAACAACACCAAGCAAAGACA...AGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGAAAACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTTCTGGGAGCGGCTCATaGTTATTCTTGACAATCTTT +
Preference number: 5 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFSGSGS*LFLTIF
Trigger: AAAGATTGTCAAGAATAACAATGAGCCGCTCCCAGA...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTCTGGGAGCGGCTCATaGTTATTCTTGACAATCTTT +
Preference number: 5 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYSGSGS*LFLTIF
Trigger: AAAGATTGTCAAGAATAACAATGAGCCGCTCCCAGA...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATCATTATTTCCACCAGTaGCATATACATTGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYHYFHQ*HIHCLL
Trigger: AAGGAGGCAATGTATATGCAACTGGTGGAAATAATG...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTCATTATTTCCACCAGTaGCATATACATTGCCTCCTT +
Preference number: 5 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFHYFHQ*HIHCLL
Trigger: AAGGAGGCAATGTATATGCAACTGGTGGAAATAATG...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATATAGCTCACCATCTGTaGTTACAAAAGCTGAATGGT +
Preference number: 5 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYIAHHL*LQKLNG
Trigger: ACCATTCAGCTTTTGTAACAACAGATGGTGAGCTAT...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp GGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTTTGATTTATATAGCTCACCATCTGTaGTTACAAAAGCTGAATGGT +
Preference number: 5 (lower is better)
Translates to: GFYLWERLIVILDNLLIYIAHHL*LQKLNG
Trigger: ACCATTCAGCTTTTGTAACAACAGATGGTGAGCTAT...ATAAATCAAAAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp CTGTTTTCTAGGATTTCTAATGAACTGCTATCTGCATCATCAAGCATGTATCCTTCTATCTCTGCTTCTTaGGTCATTTCATCTAGCAAA +
Preference number: 5 (lower is better)
Translates to: LFSRISNELLSASSSMYPSISAS*VISSSK
Trigger: TTTGCTAGATGAAATGACCAAAGAAGCAGAGATAGA...AGGATACATGCTTGATGATGCAGATAGCAGTTCATTAGAAATCCTAGAAAACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000482855.5
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp ATTCTGATGATTCTGACTCATGTGGTTCTGGTCGGCATCTTTATTATCACTTTTTCTATCTCTGCTTCTTaGGTCATTTCATCTAGCAAA +
Preference number: 5 (lower is better)
Translates to: ILMILTHVVLVGIFIITFSISAS*VISSSK
Trigger: TTTGCTAGATGAAATGACCAAAGAAGCAGAGATAGA...AAAAGTGATAATAAAGATGCCGACCAGAACCACATGAGTCAGAATCATCAGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATGTCAAAGATCACATCTaGCTTGCAACTTTCCCTTTT +
Preference number: 5 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYVKDHI*LATFPF
Trigger: AAAAGGGAAAGTTGCAAGCAAGATGTGATCTTTGAC...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS-3UTR CAA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTCAAGCATGTATCCTTTaGGGTTTTCATTGTACTCAC +
Preference number: 5 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFQACIL*GFHCTH
Trigger: GTGAGTACAATGAAAACCCAAAAGGATACATGCTTG...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp GGATTTTATCTCTGGGAGCGGCTCATTGTTATTCTTGACAATCTTTTGATTTATCAAGCATGTATCCTTTaGGGTTTTCATTGTACTCAC +
Preference number: 5 (lower is better)
Translates to: GFYLWERLIVILDNLLIYQACIL*GFHCTH
Trigger: GTGAGTACAATGAAAACCCAAAAGGATACATGCTTG...ATAAATCAAAAGATTGTCAAGAATAACAATGAGCCGCTCCCAGAGATAAAATCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000474584.5
ENST00000482855.5
ENST00000642739.1
ENST00000645124.1
ENST00000646020.1
CDS-3UTR CAA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTGTCTTTGCTTGGTGTaGTTTCACTGTTTTCTAGGA +
Preference number: 5 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYCLCLV*FHCFLG
Trigger: TCCTAGAAAACAGTGAAACAACACCAAGCAAAGACA...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTTGTCTTTGCTTGGTGTaGTTTCACTGTTTTCTAGGA +
Preference number: 5 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFCLCLV*FHCFLG
Trigger: TCCTAGAAAACAGTGAAACAACACCAAGCAAAGACA...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp ACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTTTTCTATCTCTGCTTCTTaGGTCATTTCATCTAGCAAA +
Preference number: 5 (lower is better)
Translates to: TEQLRPQHFRENLRYTYFSISAS*VISSSK
Trigger: TTTGCTAGATGAAATGACCAAAGAAGCAGAGATAGA...AAAATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000642395.2
CDS-3UTR CAA 90 bp GAAATTACAGAACAGTCAGTGAATACATTGAGGGCATATAACACATACCAGAAATCTATCTCTGCTTCTTaGGTCATTTCATCTAGCAAA +
Preference number: 5 (lower is better)
Translates to: EITEQSVNTLRAYNTYQKSISAS*VISSSK
Trigger: TTTGCTAGATGAAATGACCAAAGAAGCAGAGATAGA...TTTCTGGTATGTGTTATATGCCCTCAATGTATTCACTGACTGTTCTGTAATTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS-3UTR CAA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATAAGGACTCATCTTTTTaGTACTCTTTTCCCTTTCTC +
Preference number: 5 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYKDSSF*YSFPFL
Trigger: GAGAAAGGGAAAAGAGTACAAAAAAGATGAGTCCTT...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS-3UTR CAA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATAAGATCACATCTTGCTaGCAACTTTCCCTTTTCTTA +
Preference number: 5 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYKITSC*QLSLFL
Trigger: TAAGAAAAGGGAAAGTTGCAAGCAAGATGTGATCTT...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS-3UTR CAA 90 bp AATACTGAACAGTTAAGGCCACAACACTTTAGGGAGAATTTGAGATACACATATTACTTTGCCATGGATTaGGATATTATGGGTTTAGTC +
Preference number: 5 (lower is better)
Translates to: NTEQLRPQHFRENLRYTYYFAMD*DIMGLV
Trigger: GACTAAACCCATAATATCCAAATCCATGGCAAAGTA...ATATGTGTATCTCAAATTCTCCCTAAAGTGTTGTGGCCTTAACTGTTCAGTATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS GCA 72 bp CACCCGAATCGGGCATCAGCTCTTCCGGCTCCCTCATaGCACGGGCAGTACGGGCAGCCTGCGCCGGGGCCA +
Preference number: 6 (lower is better)
Translates to: HPNRASALPAPS*HGQYGQPAPGP
Trigger: TGGCCCCGGCGCAGGCTGCCCGTACTGCCCGTGGCATGAGGGAGCCGGAAGAGCTGATGCCCGATTCGGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000339363.7
ENST00000474584.5
ENST00000482855.5
ENST00000642373.1
ENST00000642395.2
ENST00000642558.1
ENST00000642739.1
ENST00000644238.1
ENST00000644337.1
ENST00000645032.1
ENST00000645124.1
ENST00000646020.1
ENST00000647261.1
CDS CAA 90 bp AGTACGGGCAGCCTGCGCCGGGGCCAGGAGGCTGTAGAGGACGGTTaGGTCGGGGCTAAAGCAGCTACTCCGCACCGACGCGGGCCGCGA +
Preference number: 6 (lower is better)
Translates to: STGSLRRGQEAVEDG*VGAKAATPHRRGPR
Trigger: TCGCGGCCCGCGTCGGTGCGGAGTAGCTGCTTTAGCCCCGACCAAACCGTCCTCTACAGCCTCCTGGCCCCGGCGCAGGCTGCCCGTACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000339363.7
ENST00000474584.5
ENST00000642373.1
ENST00000642395.2
ENST00000642558.1
ENST00000642739.1
ENST00000644238.1
ENST00000644337.1
ENST00000645032.1
ENST00000645124.1
ENST00000646020.1
ENST00000647261.1
CDS CAA 72 bp AGCCTGCGCCGGGGCCAGGAGGCTGTAGAGGACGGTTaGGTCGGGGCTAAAGCAGCTACTCCGCACCGACGC +
Preference number: 6 (lower is better)
Translates to: SLRRGQEAVEDG*VGAKAATPHRR
Trigger: GCGTCGGTGCGGAGTAGCTGCTTTAGCCCCGACCAAACCGTCCTCTACAGCCTCCTGGCCCCGGCGCAGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000339363.7
ENST00000474584.5
ENST00000642373.1
ENST00000642395.2
ENST00000642558.1
ENST00000642739.1
ENST00000644238.1
ENST00000644337.1
ENST00000645032.1
ENST00000645124.1
ENST00000646020.1
ENST00000647261.1
CDS CCA 72 bp CACCGACGCGGGCCGCGAAAGCCCCCAAGTTCCGCATaGCGAAACTCCGGAGATCAACTACAACCGCGCTCC +
Preference number: 6 (lower is better)
Translates to: HRRGPRKPPSSA*RNSGDQLQPRS
Trigger: GGAGCGCGGTTGTAGTTGATCTCCGGAGTTTCGCCATGCGGAACTTGGGGGCTTTCGCGGCCCGCGTCGGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000339363.7
ENST00000642373.1
ENST00000642739.1
ENST00000644337.1
ENST00000646020.1
ENST00000647261.1
CDS CAA 90 bp CGGGAGCTCAGGACCTCCAAAGTGCACAAGTCTGGAGTCCGCACTTaGGGGAGTTTACAGAAAGTGTCCCTCCCTGGCCGGGCGCGGTGG +
Preference number: 6 (lower is better)
Translates to: RELRTSKVHKSGVRT*GSLQKVSLPGRARW
Trigger: CCACCGCGCCCGGCCAGGGAGGGACACTTTCTGTAAACTCCCCAAAGTGCGGACTCCAGACTTGTGCACTTTGGAGGTCCTGAGCTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642170.1
CDS CAA 72 bp AGGACCTCCAAAGTGCACAAGTCTGGAGTCCGCACTTaGGGGAGTTTACAGAAAGTGTCCCTCCCTGGCCGG +
Preference number: 6 (lower is better)
Translates to: RTSKVHKSGVRT*GSLQKVSLPGR
Trigger: CCGGCCAGGGAGGGACACTTTCTGTAAACTCCCCAAAGTGCGGACTCCAGACTTGTGCACTTTGGAGGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642170.1
CDS CAA 72 bp TTCTCCATGCTCCTCCTCCCCTCCCTCCTCCATCTCTaGGTTTCTTTCCTTCTGATGGCCCTGCTCCCTCTC +
Preference number: 6 (lower is better)
Translates to: FSMLLLPSLLHL*VSFLLMALLPL
Trigger: GAGAGGGAGCAGGGCCATCAGAAGGAAAGAAACCAAGAGATGGAGGAGGGAGGGGAGGAGGAGCATGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS TCA 72 bp AAGGTCAGGAGATCGAGACCATCCTGGCTAACACGGTaGAACCGCATGTCTGGTTCCTCTGGCTGCATGAGG +
Preference number: 6 (lower is better)
Translates to: KVRRSRPSWLTR*NRMSGSSGCMR
Trigger: CCTCATGCAGCCAGAGGAACCAGACATGCGGTTTCACCGTGTTAGCCAGGATGGTCTCGATCTCCTGACCTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646020.1
CDS CAA 90 bp GCCGATATCCGTGAGAACCACAGTATGCTCTCCACCACAGGCTACTaGGATCACCTTCTCCGGAATTTCAGACACCAGCTGGGGTGTTCT +
Preference number: 6 (lower is better)
Translates to: ADIRENHSMLSTTGY*DHLLRNFRHQLGCS
Trigger: AGAACACCCCAGCTGGTGTCTGAAATTCCGGAGAAGGTGATCCAAGTAGCCTGTGGTGGAGAGCATACTGTGGTTCTCACGGATATCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642170.1
CDS CAA 90 bp AGTTCCTTCTCTCCCTCTCCTGGCCTCTCCATTTCTCCTCTACCCTaGTCTTTCTCCCCCTTCTCCCTCTCCTCATCTTGCCAGTGTTCT +
Preference number: 6 (lower is better)
Translates to: SSFSPSPGLSISPLP*SFSPFSLSSSCQCS
Trigger: AGAACACTGGCAAGATGAGGAGAGGGAGAAGGGGGAGAAAGACAAGGGTAGAGGAGAAATGGAGAGGCCAGGAGAGGGAGAGAAGGAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS TCA 72 bp CACGGTGAAACCGCATGTCTGGTTCCTCTGGCTGCATaGGGTCCTGTTCAGATAAGACACTCTCTTGGAGGT +
Preference number: 6 (lower is better)
Translates to: HGETACLVPLAA*GPVQIRHSLGG
Trigger: ACCTCCAAGAGAGTGTCTTATCTGAACAGGACCTCATGCAGCCAGAGGAACCAGACATGCGGTTTCACCGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646020.1
CDS CAA 90 bp CATCTCTTGGTTTCTTTCCTTCTGATGGCCCTGCTCCCTCTCCTTTaGCTCCTGCTCTTCCCCATCCCTCTTCTTCCATTCTTCCTTCTC +
Preference number: 6 (lower is better)
Translates to: HLLVSFLLMALLPLL*LLLFPIPLLPFFLL
Trigger: GAGAAGGAAGAATGGAAGAAGAGGGATGGGGAAGAGCAGGAGCAAAAGGAGAGGGAGCAGGGCCATCAGAAGGAAAGAAACCAAGAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645032.1
CDS TCA 72 bp ACCTCTTTTTGTAAACCCTCTCCATCAGTGTCAGCCTaGGGTCCCACCTGGCCTGTGTCATTACCTACTTCC +
Preference number: 6 (lower is better)
Translates to: TSFCKPSPSVSA*GPTWPVSLPTS
Trigger: GGAAGTAGGTAATGACACAGGCCAGGTGGGACCTCAGGCTGACACTGATGGAGAGGGTTTACAAAAAGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS TCA 72 bp CAGGCTCATGATGTGTGTCTGGTTCCTCTGGCTGCATaGGGTCCTGTTCAGATAAGACACTCTCTTGGAGGT +
Preference number: 6 (lower is better)
Translates to: QAHDVCLVPLAA*GPVQIRHSLGG
Trigger: ACCTCCAAGAGAGTGTCTTATCTGAACAGGACCTCATGCAGCCAGAGGAACCAGACACACATCATGAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474584.5
CDS CAA 72 bp TGCCTCAGGCTGCTGGAATCCATCAGCTATACCCTGTaGACTCTCACTTGCACCTTCCATGTAACTGTCTGG +
Preference number: 6 (lower is better)
Translates to: CLRLLESISYTL*TLTCTFHVTVW
Trigger: CCAGACAGTTACATGGAAGGTGCAAGTGAGAGTCAACAGGGTATAGCTGATGGATTCCAGCAGCCTGAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS CAA 90 bp CTTCGGTGTCACCAAGCCCCAACTGTCCTTCATTATTTCCACCAGTaGCATATACATTGCCTCCTTCTGTTGACACCAGGGTGTGGTTCC +
Preference number: 6 (lower is better)
Translates to: LRCHQAPTVLHYFHQ*HIHCLLLLTPGCGS
Trigger: GGAACCACACCCTGGTGTCAACAGAAGGAGGCAATGTATATGCAACTGGTGGAAATAATGAAGGACAGTTGGGGCTTGGTGACACCGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000339363.7
ENST00000474584.5
ENST00000482855.5
ENST00000642170.1
ENST00000642373.1
ENST00000642395.2
ENST00000642558.1
ENST00000642739.1
ENST00000644238.1
ENST00000644337.1
ENST00000645032.1
ENST00000645124.1
ENST00000646020.1
ENST00000647261.1
CDS GCA 72 bp CTCTCTCTTCGCCGCATACGTGCTGATAGAGTCCTCTaGAGTACATTTCCTGAGGTTAAACTGCTATACGGC +
Preference number: 6 (lower is better)
Translates to: LSLRRIRADRVL*STFPEVKLLYG
Trigger: GCCGTATAGCAGTTTAACCTCAGGAAATGTACTGCAGAGGACTCTATCAGCACGTATGCGGCGAAGAGAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000339363.7
ENST00000464437.1
ENST00000474584.5
ENST00000482855.5
ENST00000494707.6
ENST00000494841.1
ENST00000642170.1
ENST00000642395.2
ENST00000642739.1
ENST00000645032.1
ENST00000645124.1
ENST00000646020.1
CDS GCA 72 bp ATTCAATACATAACCGGGAGCTCAGGACCTCCAAAGTaGACAAGTCTGGAGTCCGCACTTTGGGGAGTTTAC +
Preference number: 6 (lower is better)
Translates to: IQYITGSSGPPK*TSLESALWGVY
Trigger: GTAAACTCCCCAAAGTGCGGACTCCAGACTTGTGCACTTTGGAGGTCCTGAGCTCCCGGTTATGTATTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642170.1
CDS CAA 72 bp CACCAAGCCCCAACTGTCCTTCATTATTTCCACCAGTaGCATATACATTGCCTCCTTCTGTTGACACCAGGG +
Preference number: 6 (lower is better)
Translates to: HQAPTVLHYFHQ*HIHCLLLLTPG
Trigger: CCCTGGTGTCAACAGAAGGAGGCAATGTATATGCAACTGGTGGAAATAATGAAGGACAGTTGGGGCTTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000339363.7
ENST00000474584.5
ENST00000482855.5
ENST00000642170.1
ENST00000642373.1
ENST00000642395.2
ENST00000642558.1
ENST00000642739.1
ENST00000644238.1
ENST00000644337.1
ENST00000645032.1
ENST00000645124.1
ENST00000646020.1
ENST00000647261.1
CDS CAA 90 bp CCTCAGGCTGCTGGAATCCATCAGCTATACCCTGTTGACTCTCACTaGCACCTTCCATGTAACTGTCTGGCTTTTCTACTGATTCTCTTT +
Preference number: 6 (lower is better)
Translates to: PQAAGIHQLYPVDSH*HLPCNCLAFLLILF
Trigger: AAAGAGAATCAGTAGAAAAGCCAGACAGTTACATGGAAGGTGCAAGTGAGAGTCAACAGGGTATAGCTGATGGATTCCAGCAGCCTGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS CCA 72 bp GGCTGCATGAGGTCCTGTTCAGATAAGACACTCTCTTaGAGGTTTCTCTCAGAACATCGTGGAAAGACTGAA +
Preference number: 6 (lower is better)
Translates to: GCMRSCSDKTLS*RFLSEHRGKTE
Trigger: TTCAGTCTTTCCACGATGTTCTGAGAGAAACCTCCAAGAGAGTGTCTTATCTGAACAGGACCTCATGCAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000339363.7
ENST00000474584.5
ENST00000482855.5
ENST00000494707.6
ENST00000642170.1
ENST00000642395.2
ENST00000642739.1
ENST00000644238.1
ENST00000644337.1
ENST00000645032.1
ENST00000645124.1
ENST00000646020.1
CDS CAA 72 bp GCTGGAATCCATCAGCTATACCCTGTTGACTCTCACTaGCACCTTCCATGTAACTGTCTGGCTTTTCTACTG +
Preference number: 6 (lower is better)
Translates to: AGIHQLYPVDSH*HLPCNCLAFLL
Trigger: CAGTAGAAAAGCCAGACAGTTACATGGAAGGTGCAAGTGAGAGTCAACAGGGTATAGCTGATGGATTCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS CAA 90 bp ACACTCTCTTGGAGGTTTCTCTCAGAACATCGTGGAAAGACTGAATaGGGGAGAAAACAAGCAGAAAGGCCAAGAGTCCCTTCTATTGGA +
Preference number: 6 (lower is better)
Translates to: TLSWRFLSEHRGKTE*GRKQAERPRVPSIG
Trigger: TCCAATAGAAGGGACTCTTGGCCTTTCTGCTTGTTTTCTCCCCAATTCAGTCTTTCCACGATGTTCTGAGAGAAACCTCCAAGAGAGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000339363.7
ENST00000474584.5
ENST00000482855.5
ENST00000494707.6
ENST00000494841.1
ENST00000642170.1
ENST00000642395.2
ENST00000642739.1
ENST00000644238.1
ENST00000644337.1
ENST00000645032.1
ENST00000645124.1
ENST00000646020.1
CDS CAA 90 bp AAATTCTATTGCCTCAGGCTGCTGGAATCCATCAGCTATACCCTGTaGACTCTCACTTGCACCTTCCATGTAACTGTCTGGCTTTTCTAC +
Preference number: 6 (lower is better)
Translates to: KFYCLRLLESISYTL*TLTCTFHVTVWLFY
Trigger: GTAGAAAAGCCAGACAGTTACATGGAAGGTGCAAGTGAGAGTCAACAGGGTATAGCTGATGGATTCCAGCAGCCTGAGGCAATAGAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS CAA 90 bp TTTCCGTGGCGACCATCTCCAAAAGTATACATAAGGCCGATATCTTaGGGGACTTCTGGTTTAAGACGGCAAAGTGACTGCATACTAAGC +
Preference number: 6 (lower is better)
Translates to: FPWRPSPKVYIRPIS*GTSGLRRQSDCILS
Trigger: GCTTAGTATGCAGTCACTTTGCCGTCTTAAACCAGAAGTCCCCAAAGATATCGGCCTTATGTATACTTTTGGAGATGGTCGCCACGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646020.1
CDS CCA 72 bp GCATATACATTGCCTCCTTCTGTTGACACCAGGGTGTaGTTCCTTCCACAGGCAGCTAATTTCACTTTTTCA +
Preference number: 6 (lower is better)
Translates to: AYTLPPSVDTRV*FLPQAANFTFS
Trigger: TGAAAAAGTGAAATTAGCTGCCTGTGGAAGGAACCACACCCTGGTGTCAACAGAAGGAGGCAATGTATATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000339363.7
ENST00000474584.5
ENST00000482855.5
ENST00000642170.1
ENST00000642373.1
ENST00000642395.2
ENST00000642558.1
ENST00000642739.1
ENST00000644238.1
ENST00000644337.1
ENST00000645032.1
ENST00000645124.1
ENST00000646020.1
ENST00000647261.1
CDS CAA 72 bp CGACCATCTCCAAAAGTATACATAAGGCCGATATCTTaGGGGACTTCTGGTTTAAGACGGCAAAGTGACTGC +
Preference number: 6 (lower is better)
Translates to: RPSPKVYIRPIS*GTSGLRRQSDC
Trigger: GCAGTCACTTTGCCGTCTTAAACCAGAAGTCCCCAAAGATATCGGCCTTATGTATACTTTTGGAGATGGTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646020.1
CDS TCA 72 bp TTTCATCTAGCAAATAATCTGGTTCCTCTGGCTGCATaGGGTCCTGTTCAGATAAGACACTCTCTTGGAGGT +
Preference number: 6 (lower is better)
Translates to: FHLANNLVPLAA*GPVQIRHSLGG
Trigger: ACCTCCAAGAGAGTGTCTTATCTGAACAGGACCTCATGCAGCCAGAGGAACCAGATTATTTGCTAGATGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000339363.7
ENST00000482855.5
ENST00000494707.6
ENST00000642170.1
ENST00000642395.2
ENST00000642739.1
ENST00000644238.1
ENST00000644337.1
ENST00000645032.1
ENST00000645124.1
CDS GCA 72 bp TTCATCATCCTCTTTCTCTCCACTACTAAATTCTATTaGCTCAGGCTGCTGGAATCCATCAGCTATACCCTG +
Preference number: 6 (lower is better)
Translates to: FIILFLSTTKFY*LRLLESISYTL
Trigger: CAGGGTATAGCTGATGGATTCCAGCAGCCTGAGGCAATAGAATTTAGTAGTGGAGAGAAAGAGGATGATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS TCA 72 bp AAATTGTCCCAGCCCAAAGGTATACACAGCATTCTCTaGAAGGAAAGGGGCAAATACAAGACAAGGATTATG +
Preference number: 6 (lower is better)
Translates to: KLSQPKGIHSIL*KERGKYKTRIM
Trigger: CATAATCCTTGTCTTGTATTTGCCCCTTTCCTTTCAGAGAATGCTGTGTATACCTTTGGGCTGGGACAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494841.1
CDS CAA 72 bp TCCTTGTTCAATCAATTTCCTGCCATACCGTATGTTTaGGTCAGTTTCCACTTCATCATCCTCTTTCTCTCC +
Preference number: 6 (lower is better)
Translates to: SLFNQFPAIPYV*VSFHFIILFLS
Trigger: GGAGAGAAAGAGGATGATGAAGTGGAAACTGACCAAAACATACGGTATGGCAGGAAATTGATTGAACAAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000339363.7
CDS TCA 72 bp GATATCTTTGGGGACTTCTGGTTTAAGACGGCAAAGTaGCTGCATACTAAGCAAATCCAAGAGAACTGTTAT +
Preference number: 6 (lower is better)
Translates to: DIFGDFWFKTAK*LHTKQIQENCY
Trigger: ATAACAGTTCTCTTGGATTTGCTTAGTATGCAGTCACTTTGCCGTCTTAAACCAGAAGTCCCCAAAGATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646020.1
CDS CAA 72 bp GCTTCTTTGGGGAAGAAGAAACAGTATATCTTGCATTaGCTGATTCCTAGTTTCCCTAGCCAGATACCATTA +
Preference number: 6 (lower is better)
Translates to: ASLGKKKQYILH*LIPSFPSQIPL
Trigger: TAATGGTATCTGGCTAGGGAAACTAGGAATCAGCAAATGCAAGATATACTGTTTCTTCTTCCCCAAAGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647261.1
CDS CAA 90 bp CCACAGATAAGCAAGTATCATTTATTTCATCGAATTCAATTTCTTTaGCCACACCACGATGAGGAGCAGCAAAAACTACCATGTGACATC +
Preference number: 6 (lower is better)
Translates to: PQISKYHLFHRIQFL*PHHDEEQQKLPCDI
Trigger: GATGTCACATGGTAGTTTTTGCTGCTCCTCATCGTGGTGTGGCAAAAGAAATTGAATTCGATGAAATAAATGATACTTGCTTATCTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000339363.7
ENST00000464437.1
ENST00000474584.5
ENST00000482855.5
ENST00000494707.6
ENST00000494841.1
ENST00000642170.1
ENST00000642395.2
ENST00000642558.1
ENST00000642739.1
ENST00000645032.1
ENST00000645124.1
ENST00000646020.1