Pregenerated sensors for RPF1 (Homo sapiens)
Ensembl gene IDs: ENSG00000117133Ensembl transcript IDs: ENST00000370654.6, ENST00000370656.5
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTAAGGTCAGGAGGAGGCTGTTAAGTTCTACGGGTTTCCATCCATaGGTTACTTATAGGGTTAACTTTGTTTCAGTGCCTGAATGGAGT | + |
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Preference number: 1 (lower is better) Translates to: FKVRRRLLSSTGFHP*VTYRVNFVSVPEWS Trigger: ACTCCATTCAGGCACTGAAACAAAGTTAACCCTATAAGTAACTCATGGATGGAAACCCGTAGAACTTAACAGCCTCCTCCTGACCTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| 3UTR-3UTR CCA 90 bp | AAAACTGTGCCAGACACTGGGAATCCAAGGTTAATCTGGTATAAAAATCAAGGGCACAGTGGCAATTCATaGCATTTGGTAATTCGTCCA | + |
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Preference number: 2 (lower is better) Translates to: KTVPDTGNPRLIWYKNQGHSGNS*HLVIRP Trigger: TGGACGAATTACCAAATGCCATGAATTGCCACTGTG...CCCTTGATTTTTATACCAGATTAACCTTGGATTCCCAGTGTCTGGCACAGTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| 3UTR-3UTR CCA 90 bp | ACTGGGAATCCAAGGTTAATCTGGTATAAAAATCAAGGGTTAGCCAATATTTACTACATAAACACACAGTaGCAATTCATGGCATTTGGT | + |
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Preference number: 2 (lower is better) Translates to: TGNPRLIWYKNQGLANIYYINTQ*QFMAFG Trigger: ACCAAATGCCATGAATTGCCACTGTGTGTTTATGTA...GTAAATATTGGCTAACCCTTGATTTTTATACCAGATTAACCTTGGATTCCCAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| 3UTR TCA 72 bp | AGGAGGAGGCTGTTAAGTTCTACGGGTTTCCATCCATaGGTTACTTATAGGGTTAACTTTGTTTCAGTGCCT | + |
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Preference number: 3 (lower is better) Translates to: RRRLLSSTGFHP*VTYRVNFVSVP Trigger: AGGCACTGAAACAAAGTTAACCCTATAAGTAACTCATGGATGGAAACCCGTAGAACTTAACAGCCTCCTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| 3UTR-3UTR CAA 90 bp | ATTCACAGTTACCCAAAAACAAGAGAACTAAGTTTAAGGAAACCTAAGCCATCAGGCAATTCATGGCATTaGGTAATTCGTCCAGACGTG | + |
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Preference number: 3 (lower is better) Translates to: IHSYPKTRELSLRKPKPSGNSWH*VIRPDV Trigger: CACGTCTGGACGAATTACCAAATGCCATGAATTGCC...TGATGGCTTAGGTTTCCTTAAACTTAGTTCTCTTGTTTTTGGGTAACTGTGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR TCA 90 bp | ACTGGGAATCCAAGGTTAATCTGGTATAAAAATCAAGGGTTAGCCAATATTTACGCGCCTGCAGCCTCCTaGAGTTCTTCGGCAGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: TGNPRLIWYKNQGLANIYAPAAS*SSSAAA Trigger: AGCCGCTGCCGAAGAACTTCAGGAGGCTGCAGGCGC...GTAAATATTGGCTAACCCTTGATTTTTATACCAGATTAACCTTGGATTCCCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR GCA 90 bp | AAAACTGTGCCAGACACTGGGAATCCAAGGTTAATCTGGTATAAAAATCAAGGGGACTTTTCTTCCCGCTaGTGCTGCTCTTATCCCCGG | + |
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Preference number: 4 (lower is better) Translates to: KTVPDTGNPRLIWYKNQGDFSSR*CCSYPR Trigger: CCGGGGATAAGAGCAGCAGCAGCGGGAAGAAAAGTC...CCCTTGATTTTTATACCAGATTAACCTTGGATTCCCAGTGTCTGGCACAGTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR GCA 90 bp | TTCATGGCATTTGGTAATTCGTCCAGACGTGAAAGGTTTATGAAATCAGCAAATTCTTCCCGCTGCTGCTaGTCTTATCCCCGGCTTTCG | + |
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Preference number: 4 (lower is better) Translates to: FMAFGNSSRRERFMKSANSSRCC*SYPRLS Trigger: CGAAAGCCGGGGATAAGAGCAGCAGCAGCGGGAAGA...ATTTGCTGATTTCATAAACCTTTCACGTCTGGACGAATTACCAAATGCCATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR GCA 90 bp | AGATTAGCTTCAGTAATTTGCAACTTTGCTTTAAACCCTGGTAGATCATTTTGCCCCATCCCCAGCGCCTaGAGCCTCCTGAAGTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: RLASVICNFALNPGRSFCPIPSA*SLLKFF Trigger: GAAGAACTTCAGGAGGCTGCAGGCGCTGGGGATGGG...GCAAAATGATCTACCAGGGTTTAAAGCAAAGTTGCAAATTACTGAAGCTAATCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR CCA 90 bp | AAAACTGTGCCAGACACTGGGAATCCAAGGTTAATCTGGTATAAAAATCAAGGGCGAAATGCTAAAGCCTaGCGGAAAGGCAGCCGCTTT | + |
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Preference number: 4 (lower is better) Translates to: KTVPDTGNPRLIWYKNQGRNAKA*RKGSRF Trigger: AAAGCGGCTGCCTTTCCGCCAGGCTTTAGCATTTCG...CCCTTGATTTTTATACCAGATTAACCTTGGATTCCCAGTGTCTGGCACAGTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR GCA 90 bp | ACCAAAGTTCAAGATAGGCCTGTTCAGCAAAATCCAATATCATTCTCTCAGTACTTTTCTTCCCGCTGCTaGTGCTCTTATCCCCGGCTT | + |
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Preference number: 4 (lower is better) Translates to: TKVQDRPVQQNPISFSQYFSSRC*CSYPRL Trigger: AAGCCGGGGATAAGAGCAGCAGCAGCGGGAAGAAAA...GTACTGAGAGAATGATATTGGATTTTGCTGAACAGGCCTATCTTGAACTTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR GCA 90 bp | ACCAAAGTTCAAGATAGGCCTGTTCAGCAAAATCCAATATCATTCTCTCAGTACAACTTTTCCTTCCGCTaGTGCTGTTTCCACCGCGTG | + |
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Preference number: 4 (lower is better) Translates to: TKVQDRPVQQNPISFSQYNFSFR*CCFHRV Trigger: CACGCGGTGGAAACAGCAGCAGCGGAAGGAAAAGTT...GTACTGAGAGAATGATATTGGATTTTGCTGAACAGGCCTATCTTGAACTTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR TCA 90 bp | AGATTAGCTTCAGTAATTTGCAACTTTGCTTTAAACCCTGGTAGATCATTTTGCGCTGTTTCCACCGCGTaGACATTAAGTGTCGCCGCT | + |
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Preference number: 4 (lower is better) Translates to: RLASVICNFALNPGRSFCAVSTA*TLSVAA Trigger: AGCGGCGACACTTAATGTTCACGCGGTGGAAACAGC...GCAAAATGATCTACCAGGGTTTAAAGCAAAGTTGCAAATTACTGAAGCTAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR TCA 90 bp | AAAACTGTGCCAGACACTGGGAATCCAAGGTTAATCTGGTATAAAAATCAAGGGCGTACTGTTCTCCCATaGGGTCTATCTGATGTTGTG | + |
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Preference number: 4 (lower is better) Translates to: KTVPDTGNPRLIWYKNQGRTVLP*GLSDVV Trigger: CACAACATCAGATAGACCTCATGGGAGAACAGTACG...CCCTTGATTTTTATACCAGATTAACCTTGGATTCCCAGTGTCTGGCACAGTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR CCA 90 bp | ACTGGGAATCCAAGGTTAATCTGGTATAAAAATCAAGGGTTAGCCAATATTTACGGGTACAGGCTTTGGTaGAGCCTTATCGCCAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: TGNPRLIWYKNQGLANIYGYRLW*SLIAKS Trigger: GCTCTTGGCGATAAGGCTCCACCAAAGCCTGTACCC...GTAAATATTGGCTAACCCTTGATTTTTATACCAGATTAACCTTGGATTCCCAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR CCA 90 bp | ACCAAAGTTCAAGATAGGCCTGTTCAGCAAAATCCAATATCATTCTCTCAGTACCAGGTATGTGTTCTGTaGGGTCCTTGCCTCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: TKVQDRPVQQNPISFSQYQVCVL*GPCLFS Trigger: AGAGAAGAGGCAAGGACCCCACAGAACACATACCTG...GTACTGAGAGAATGATATTGGATTTTGCTGAACAGGCCTATCTTGAACTTTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR GCA 90 bp | AGATTAGCTTCAGTAATTTGCAACTTTGCTTTAAACCCTGGTAGATCATTTTGCTTTTCCTTCCGCTGCTaGTGTTTCCACCGCGTGAAC | + |
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Preference number: 4 (lower is better) Translates to: RLASVICNFALNPGRSFCFSFRC*CFHRVN Trigger: GTTCACGCGGTGGAAACAGCAGCAGCGGAAGGAAAA...GCAAAATGATCTACCAGGGTTTAAAGCAAAGTTGCAAATTACTGAAGCTAATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR CCA 90 bp | ATTCACAGTTACCCAAAAACAAGAGAACTAAGTTTAAGGAAACCTAAGCCATCACTTGGGTACAGGCTTTaGTGGAGCCTTATCGCCAAG | + |
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Preference number: 4 (lower is better) Translates to: IHSYPKTRELSLRKPKPSLGYRL*WSLIAK Trigger: CTTGGCGATAAGGCTCCACCAAAGCCTGTACCCAAG...TGATGGCTTAGGTTTCCTTAAACTTAGTTCTCTTGTTTTTGGGTAACTGTGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR CCA 90 bp | TTCATGGCATTTGGTAATTCGTCCAGACGTGAAAGGTTTATGAAATCAGCAAATCTCGCTGGTTGTCAATaGTCTTGGGTACAGGCTTTG | + |
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Preference number: 4 (lower is better) Translates to: FMAFGNSSRRERFMKSANLAGCQ*SWVQAL Trigger: CAAAGCCTGTACCCAAGACCATTGACAACCAGCGAG...ATTTGCTGATTTCATAAACCTTTCACGTCTGGACGAATTACCAAATGCCATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR TCA 90 bp | AAAACTGTGCCAGACACTGGGAATCCAAGGTTAATCTGGTATAAAAATCAAGGGCCCATGAGGTCTATCTaGTGTTGTGATGAGAATCTT | + |
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Preference number: 4 (lower is better) Translates to: KTVPDTGNPRLIWYKNQGPMRSI*CCDENL Trigger: AAGATTCTCATCACAACATCAGATAGACCTCATGGG...CCCTTGATTTTTATACCAGATTAACCTTGGATTCCCAGTGTCTGGCACAGTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR TCA 90 bp | ACCAAAGTTCAAGATAGGCCTGTTCAGCAAAATCCAATATCATTCTCTCAGTACAAACATACGTCCAATTaGATGACCCAGCCGTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: TKVQDRPVQQNPISFSQYKHTSN*MTQPCC Trigger: ACAACACGGCTGGGTCATTCAATTGGACGTATGTTT...GTACTGAGAGAATGATATTGGATTTTGCTGAACAGGCCTATCTTGAACTTTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR TCA 90 bp | TTCATGGCATTTGGTAATTCGTCCAGACGTGAAAGGTTTATGAAATCAGCAAATCTTTGTTTCAGTGCCTaGATGGAGTACTACAGCACC | + |
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Preference number: 4 (lower is better) Translates to: FMAFGNSSRRERFMKSANLCFSA*MEYYST Trigger: GGTGCTGTAGTACTCCATTCAGGCACTGAAACAAAG...ATTTGCTGATTTCATAAACCTTTCACGTCTGGACGAATTACCAAATGCCATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR TCA 90 bp | AAAACTGTGCCAGACACTGGGAATCCAAGGTTAATCTGGTATAAAAATCAAGGGACGGGTTTCCATCCATaGGTTACTTATAGGGTTAAC | + |
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Preference number: 4 (lower is better) Translates to: KTVPDTGNPRLIWYKNQGTGFHP*VTYRVN Trigger: GTTAACCCTATAAGTAACTCATGGATGGAAACCCGT...CCCTTGATTTTTATACCAGATTAACCTTGGATTCCCAGTGTCTGGCACAGTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR TCA 90 bp | ACCAAAGTTCAAGATAGGCCTGTTCAGCAAAATCCAATATCATTCTCTCAGTACGGGCCATTTGGCAAGTaGCTCAAAATAAGTCCATTT | + |
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Preference number: 4 (lower is better) Translates to: TKVQDRPVQQNPISFSQYGPFGK*LKISPF Trigger: AAATGGACTTATTTTGAGTCACTTGCCAAATGGCCC...GTACTGAGAGAATGATATTGGATTTTGCTGAACAGGCCTATCTTGAACTTTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR TCA 90 bp | TTCATGGCATTTGGTAATTCGTCCAGACGTGAAAGGTTTATGAAATCAGCAAATCGTGGTCCAAGTTCCTaGATTCCCACTTTCTTTTCA | + |
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Preference number: 4 (lower is better) Translates to: FMAFGNSSRRERFMKSANRGPSS*IPTFFS Trigger: TGAAAAGAAAGTGGGAATTCAGGAACTTGGACCACG...ATTTGCTGATTTCATAAACCTTTCACGTCTGGACGAATTACCAAATGCCATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR CCA 90 bp | ACCAAAGTTCAAGATAGGCCTGTTCAGCAAAATCCAATATCATTCTCTCAGTACAGCAGTTGGGCCATTTaGCAAGTGACTCAAAATAAG | + |
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Preference number: 4 (lower is better) Translates to: TKVQDRPVQQNPISFSQYSSWAI*QVTQNK Trigger: CTTATTTTGAGTCACTTGCCAAATGGCCCAACTGCT...GTACTGAGAGAATGATATTGGATTTTGCTGAACAGGCCTATCTTGAACTTTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR CCA 90 bp | ATTCACAGTTACCCAAAAACAAGAGAACTAAGTTTAAGGAAACCTAAGCCATCAATTTCCCGGGGCTTATaGACCCATTCATACTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: IHSYPKTRELSLRKPKPSISRGL*THSYSP Trigger: TGGAGAGTATGAATGGGTCCATAAGCCCCGGGAAAT...TGATGGCTTAGGTTTCCTTAAACTTAGTTCTCTTGTTTTTGGGTAACTGTGAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR TCA 90 bp | ATTCACAGTTACCCAAAAACAAGAGAACTAAGTTTAAGGAAACCTAAGCCATCACTGCTCATTTTAAAATaGGCAGTTGGGCCATTTGGC | + |
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Preference number: 4 (lower is better) Translates to: IHSYPKTRELSLRKPKPSLLILK*AVGPFG Trigger: GCCAAATGGCCCAACTGCTCATTTTAAAATGAGCAG...TGATGGCTTAGGTTTCCTTAAACTTAGTTCTCTTGTTTTTGGGTAACTGTGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR TCA 90 bp | TTCATGGCATTTGGTAATTCGTCCAGACGTGAAAGGTTTATGAAATCAGCAAATATACGTCCAATTGAATaGCCCAGCCGTGTTGTAAAA | + |
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Preference number: 4 (lower is better) Translates to: FMAFGNSSRRERFMKSANIRPIE*PSRVVK Trigger: TTTTACAACACGGCTGGGTCATTCAATTGGACGTAT...ATTTGCTGATTTCATAAACCTTTCACGTCTGGACGAATTACCAAATGCCATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR CCA 90 bp | ATTCACAGTTACCCAAAAACAAGAGAACTAAGTTTAAGGAAACCTAAGCCATCATCATCATACACTCGCTaGTTGTCAATGGTCTTGGGT | + |
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Preference number: 4 (lower is better) Translates to: IHSYPKTRELSLRKPKPSSSYTR*LSMVLG Trigger: ACCCAAGACCATTGACAACCAGCGAGTGTATGATGA...TGATGGCTTAGGTTTCCTTAAACTTAGTTCTCTTGTTTTTGGGTAACTGTGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR CCA 90 bp | AGATTAGCTTCAGTAATTTGCAACTTTGCTTTAAACCCTGGTAGATCATTTTGCAACTGTGCCAGACACTaGGAATCCAAGGTTAATCTG | + |
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Preference number: 4 (lower is better) Translates to: RLASVICNFALNPGRSFCNCARH*ESKVNL Trigger: CAGATTAACCTTGGATTCCCAGTGTCTGGCACAGTT...GCAAAATGATCTACCAGGGTTTAAAGCAAAGTTGCAAATTACTGAAGCTAATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR CCA 90 bp | ACTGGGAATCCAAGGTTAATCTGGTATAAAAATCAAGGGTTAGCCAATATTTACGTTTCAGTGCCTGAATaGAGTACTACAGCACCATGT | + |
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Preference number: 4 (lower is better) Translates to: TGNPRLIWYKNQGLANIYVSVPE*STTAPC Trigger: ACATGGTGCTGTAGTACTCCATTCAGGCACTGAAAC...GTAAATATTGGCTAACCCTTGATTTTTATACCAGATTAACCTTGGATTCCCAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR TCA 90 bp | ATTCACAGTTACCCAAAAACAAGAGAACTAAGTTTAAGGAAACCTAAGCCATCACCTACTCTTCTCACATaGCTTTATGCCATACATCTG | + |
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Preference number: 4 (lower is better) Translates to: IHSYPKTRELSLRKPKPSPTLLT*LYAIHL Trigger: CAGATGTATGGCATAAAGTCATGTGAGAAGAGTAGG...TGATGGCTTAGGTTTCCTTAAACTTAGTTCTCTTGTTTTTGGGTAACTGTGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR CCA 90 bp | ACTGGGAATCCAAGGTTAATCTGGTATAAAAATCAAGGGTTAGCCAATATTTACCACAGTGGCAATTCATaGCATTTGGTAATTCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: TGNPRLIWYKNQGLANIYHSGNS*HLVIRP Trigger: TGGACGAATTACCAAATGCCATGAATTGCCACTGTG...GTAAATATTGGCTAACCCTTGATTTTTATACCAGATTAACCTTGGATTCCCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR GCA 90 bp | ACTGGGAATCCAAGGTTAATCTGGTATAAAAATCAAGGGTTAGCCAATATTTACTCTCACATGACTTTATaGCATACATCTGGCAAGACT | + |
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Preference number: 4 (lower is better) Translates to: TGNPRLIWYKNQGLANIYSHMTL*HTSGKT Trigger: AGTCTTGCCAGATGTATGGCATAAAGTCATGTGAGA...GTAAATATTGGCTAACCCTTGATTTTTATACCAGATTAACCTTGGATTCCCAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR CCA 90 bp | ACTGGGAATCCAAGGTTAATCTGGTATAAAAATCAAGGGTTAGCCAATATTTACTTTAAAATGAGCAGTTaGGCCATTTGGCAAGTGACT | + |
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Preference number: 4 (lower is better) Translates to: TGNPRLIWYKNQGLANIYFKMSS*AIWQVT Trigger: AGTCACTTGCCAAATGGCCCAACTGCTCATTTTAAA...GTAAATATTGGCTAACCCTTGATTTTTATACCAGATTAACCTTGGATTCCCAGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR TCA 90 bp | AGATTAGCTTCAGTAATTTGCAACTTTGCTTTAAACCCTGGTAGATCATTTTGCGACGTGAAAGGTTTATaGAATCAGCAAATGCCATTT | + |
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Preference number: 4 (lower is better) Translates to: RLASVICNFALNPGRSFCDVKGL*NQQMPF Trigger: AAATGGCATTTGCTGATTTCATAAACCTTTCACGTC...GCAAAATGATCTACCAGGGTTTAAAGCAAAGTTGCAAATTACTGAAGCTAATCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR TCA 90 bp | ACTGGGAATCCAAGGTTAATCTGGTATAAAAATCAAGGGTTAGCCAATATTTACTATATTAATCTGTTCTaGACACCTGAAGGGGTTAAG | + |
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Preference number: 4 (lower is better) Translates to: TGNPRLIWYKNQGLANIYYINLF*TPEGVK Trigger: CTTAACCCCTTCAGGTGTTCAGAACAGATTAATATA...GTAAATATTGGCTAACCCTTGATTTTTATACCAGATTAACCTTGGATTCCCAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR GCA 90 bp | ACTGGGAATCCAAGGTTAATCTGGTATAAAAATCAAGGGTTAGCCAATATTTACTTAACTTTGTTTCAGTaGCTGAATGGAGTACTACAG | + |
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Preference number: 4 (lower is better) Translates to: TGNPRLIWYKNQGLANIYLTLFQ*LNGVLQ Trigger: CTGTAGTACTCCATTCAGGCACTGAAACAAAGTTAA...GTAAATATTGGCTAACCCTTGATTTTTATACCAGATTAACCTTGGATTCCCAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR CCA 90 bp | ATTCACAGTTACCCAAAAACAAGAGAACTAAGTTTAAGGAAACCTAAGCCATCATACATAAACACACAGTaGCAATTCATGGCATTTGGT | + |
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Preference number: 4 (lower is better) Translates to: IHSYPKTRELSLRKPKPSYINTQ*QFMAFG Trigger: ACCAAATGCCATGAATTGCCACTGTGTGTTTATGTA...TGATGGCTTAGGTTTCCTTAAACTTAGTTCTCTTGTTTTTGGGTAACTGTGAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR CCA 90 bp | ACTGGGAATCCAAGGTTAATCTGGTATAAAAATCAAGGGTTAGCCAATATTTACAAACATCCAGAAACCTaGCCTCCATTTAAGCTATTA | + |
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Preference number: 4 (lower is better) Translates to: TGNPRLIWYKNQGLANIYKHPET*PPFKLL Trigger: TAATAGCTTAAATGGAGGCCAGGTTTCTGGATGTTT...GTAAATATTGGCTAACCCTTGATTTTTATACCAGATTAACCTTGGATTCCCAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS CCA 90 bp | GGTCTACTGTGGTTTCATCATACACTCGCTGGTTGTCAATGGTCTTaGGTACAGGCTTTGGTGGAGCCTTATCGCCAAGAGCCTCTCTTT | + |
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Preference number: 5 (lower is better) Translates to: GLLWFHHTLAGCQWS*VQALVEPYRQEPLF Trigger: AAAGAGAGGCTCTTGGCGATAAGGCTCCACCAAAGCCTGTACCCAAGACCATTGACAACCAGCGAGTGTATGATGAAACCACAGTAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370654.6 ENST00000370656.5 |
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| CDS CCA 90 bp | ACCTCTTCATCATTAGGGTCTACTGTGGTTTCATCATACACTCGCTaGTTGTCAATGGTCTTGGGTACAGGCTTTGGTGGAGCCTTATCG | + |
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Preference number: 5 (lower is better) Translates to: TSSSLGSTVVSSYTR*LSMVLGTGFGGALS Trigger: CGATAAGGCTCCACCAAAGCCTGTACCCAAGACCATTGACAACCAGCGAGTGTATGATGAAACCACAGTAGACCCTAATGATGAAGAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370654.6 ENST00000370656.5 |
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| CDS-3UTR CAA 90 bp | ACCAAAGTTCAAGATAGGCCTGTTCAGCAAAATCCAATATCATTCTCTCAGTACTCTTGGGTACAGGCTTaGGTGGAGCCTTATCGCCAA | + |
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Preference number: 5 (lower is better) Translates to: TKVQDRPVQQNPISFSQYSWVQA*VEPYRQ Trigger: TTGGCGATAAGGCTCCACCAAAGCCTGTACCCAAGA...GTACTGAGAGAATGATATTGGATTTTGCTGAACAGGCCTATCTTGAACTTTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR CAA 90 bp | AAAACTGTGCCAGACACTGGGAATCCAAGGTTAATCTGGTATAAAAATCAAGGGTGGTTGTCAATGGTCTaGGGTACAGGCTTTGGTGGA | + |
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Preference number: 5 (lower is better) Translates to: KTVPDTGNPRLIWYKNQGWLSMV*GTGFGG Trigger: TCCACCAAAGCCTGTACCCAAGACCATTGACAACCA...CCCTTGATTTTTATACCAGATTAACCTTGGATTCCCAGTGTCTGGCACAGTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR CAA 90 bp | AAAACTGTGCCAGACACTGGGAATCCAAGGTTAATCTGGTATAAAAATCAAGGGCAAACATACGTCCAATaGAATGACCCAGCCGTGTTG | + |
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Preference number: 5 (lower is better) Translates to: KTVPDTGNPRLIWYKNQGQTYVQ*NDPAVL Trigger: CAACACGGCTGGGTCATTCAATTGGACGTATGTTTG...CCCTTGATTTTTATACCAGATTAACCTTGGATTCCCAGTGTCTGGCACAGTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR CAA 90 bp | TTCATGGCATTTGGTAATTCGTCCAGACGTGAAAGGTTTATGAAATCAGCAAATGGCAATTCATGGCATTaGGTAATTCGTCCAGACGTG | + |
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Preference number: 5 (lower is better) Translates to: FMAFGNSSRRERFMKSANGNSWH*VIRPDV Trigger: CACGTCTGGACGAATTACCAAATGCCATGAATTGCC...ATTTGCTGATTTCATAAACCTTTCACGTCTGGACGAATTACCAAATGCCATGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR CAA 90 bp | ACTGGGAATCCAAGGTTAATCTGGTATAAAAATCAAGGGTTAGCCAATATTTACTCATACACTCGCTGGTaGTCAATGGTCTTGGGTACA | + |
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Preference number: 5 (lower is better) Translates to: TGNPRLIWYKNQGLANIYSYTRW*SMVLGT Trigger: TGTACCCAAGACCATTGACAACCAGCGAGTGTATGA...GTAAATATTGGCTAACCCTTGATTTTTATACCAGATTAACCTTGGATTCCCAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR CAA 90 bp | TTCATGGCATTTGGTAATTCGTCCAGACGTGAAAGGTTTATGAAATCAGCAAATGGAATTTTCTTCTACTaGTATCCATTTCCCGGGGCT | + |
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Preference number: 5 (lower is better) Translates to: FMAFGNSSRRERFMKSANGIFFY*YPFPGA Trigger: AGCCCCGGGAAATGGATACAAGTAGAAGAAAATTCC...ATTTGCTGATTTCATAAACCTTTCACGTCTGGACGAATTACCAAATGCCATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR CAA 90 bp | AGATTAGCTTCAGTAATTTGCAACTTTGCTTTAAACCCTGGTAGATCATTTTGCTGTTCTGTGGGGTCCTaGCCTCTTCTCTTAATTTCT | + |
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Preference number: 5 (lower is better) Translates to: RLASVICNFALNPGRSFCCSVGS*PLLLIS Trigger: AGAAATTAAGAGAAGAGGCAAGGACCCCACAGAACA...GCAAAATGATCTACCAGGGTTTAAAGCAAAGTTGCAAATTACTGAAGCTAATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR CAA 90 bp | ACCAAAGTTCAAGATAGGCCTGTTCAGCAAAATCCAATATCATTCTCTCAGTACCTTATAGGGTTAACTTaGTTTCAGTGCCTGAATGGA | + |
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Preference number: 5 (lower is better) Translates to: TKVQDRPVQQNPISFSQYLIGLT*FQCLNG Trigger: TCCATTCAGGCACTGAAACAAAGTTAACCCTATAAG...GTACTGAGAGAATGATATTGGATTTTGCTGAACAGGCCTATCTTGAACTTTGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR CAA 90 bp | AGATTAGCTTCAGTAATTTGCAACTTTGCTTTAAACCCTGGTAGATCATTTTGCAAGTGTCGCCGCTGTTaGTTTTTAATCTCCGAAATG | + |
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Preference number: 5 (lower is better) Translates to: RLASVICNFALNPGRSFCKCRRC*FLISEM Trigger: CATTTCGGAGATTAAAAACAAACAGCGGCGACACTT...GCAAAATGATCTACCAGGGTTTAAAGCAAAGTTGCAAATTACTGAAGCTAATCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR CAA 90 bp | ACTGGGAATCCAAGGTTAATCTGGTATAAAAATCAAGGGTTAGCCAATATTTACGTTGTGATGAGAATCTaGGGAGAAGTCTGTTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: TGNPRLIWYKNQGLANIYVVMRI*GEVCLL Trigger: CAACAAACAGACTTCTCCCAAGATTCTCATCACAAC...GTAAATATTGGCTAACCCTTGATTTTTATACCAGATTAACCTTGGATTCCCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR CAA 90 bp | ACTGGGAATCCAAGGTTAATCTGGTATAAAAATCAAGGGTTAGCCAATATTTACCTGCCTTCCGATAAATaGAGGATTATGAGGAAAGAG | + |
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Preference number: 5 (lower is better) Translates to: TGNPRLIWYKNQGLANIYLPSDK*RIMRKE Trigger: CTCTTTCCTCATAATCCTCAATTTATCGGAAGGCAG...GTAAATATTGGCTAACCCTTGATTTTTATACCAGATTAACCTTGGATTCCCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS-3UTR CAA 90 bp | ACTGGGAATCCAAGGTTAATCTGGTATAAAAATCAAGGGTTAGCCAATATTTACGAATATGTAATCCCGTaGATTGTGGAATGTGGCAAC | + |
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Preference number: 5 (lower is better) Translates to: TGNPRLIWYKNQGLANIYEYVIP*IVECGN Trigger: GTTGCCACATTCCACAATCAACGGGATTACATATTC...GTAAATATTGGCTAACCCTTGATTTTTATACCAGATTAACCTTGGATTCCCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS TCA 90 bp | AAATTGAGGATTATGAGGAAAGAGAGATGCAAACATACGTCCAATTaGATGACCCAGCCGTGTTGTAAAATTATTCAGAATTATTTCAGG | + |
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Preference number: 5 (lower is better) Translates to: KLRIMRKERCKHTSN*MTQPCCKIIQNYFR Trigger: CCTGAAATAATTCTGAATAATTTTACAACACGGCTGGGTCATTCAATTGGACGTATGTTTGCATCTCTCTTTCCTCATAATCCTCAATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS CCA 72 bp | CCGCTGTTTGTTTTTAATCTCCGAAATGCTAAAGCCTaGCGGAAAGGCAGCCGCTTTCGGGGGTTGGACCCC | + |
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Preference number: 6 (lower is better) Translates to: PLFVFNLRNAKA*RKGSRFRGLDP Trigger: GGGGTCCAACCCCCGAAAGCGGCTGCCTTTCCGCCAGGCTTTAGCATTTCGGAGATTAAAAACAAACAGCGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000370654.6 ENST00000370656.5 |
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| CDS CAA 90 bp | CGCTGCTGCTGTTTCCACCGCGTGAACATTAAGTGTCGCCGCTGTTaGTTTTTAATCTCCGAAATGCTAAAGCCTGGCGGAAAGGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RCCCFHRVNIKCRRC*FLISEMLKPGGKAA Trigger: GGCTGCCTTTCCGCCAGGCTTTAGCATTTCGGAGATTAAAAACAAACAGCGGCGACACTTAATGTTCACGCGGTGGAAACAGCAGCAGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000370654.6 ENST00000370656.5 |
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| CDS CAA 90 bp | GGGTCTACTGTGGTTTCATCATACACTCGCTGGTTGTCAATGGTCTaGGGTACAGGCTTTGGTGGAGCCTTATCGCCAAGAGCCTCTCTT | + |
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Preference number: 6 (lower is better) Translates to: GSTVVSSYTRWLSMV*GTGFGGALSPRASL Trigger: AAGAGAGGCTCTTGGCGATAAGGCTCCACCAAAGCCTGTACCCAAGACCATTGACAACCAGCGAGTGTATGATGAAACCACAGTAGACCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370654.6 ENST00000370656.5 |
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| CDS CCA 72 bp | CTACTGTGGTTTCATCATACACTCGCTGGTTGTCAATaGTCTTGGGTACAGGCTTTGGTGGAGCCTTATCGC | + |
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Preference number: 6 (lower is better) Translates to: LLWFHHTLAGCQ*SWVQALVEPYR Trigger: GCGATAAGGCTCCACCAAAGCCTGTACCCAAGACCATTGACAACCAGCGAGTGTATGATGAAACCACAGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370654.6 ENST00000370656.5 |
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| CDS CAA 72 bp | GTGGTTTCATCATACACTCGCTGGTTGTCAATGGTCTaGGGTACAGGCTTTGGTGGAGCCTTATCGCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: VVSSYTRWLSMV*GTGFGGALSPR Trigger: TCTTGGCGATAAGGCTCCACCAAAGCCTGTACCCAAGACCATTGACAACCAGCGAGTGTATGATGAAACCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370654.6 ENST00000370656.5 |
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| CDS CAA 72 bp | TTAGGGTCTACTGTGGTTTCATCATACACTCGCTGGTaGTCAATGGTCTTGGGTACAGGCTTTGGTGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: LGSTVVSSYTRW*SMVLGTGFGGA Trigger: GGCTCCACCAAAGCCTGTACCCAAGACCATTGACAACCAGCGAGTGTATGATGAAACCACAGTAGACCCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370654.6 ENST00000370656.5 |
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| CDS CAA 90 bp | TCTTCATCATTAGGGTCTACTGTGGTTTCATCATACACTCGCTGGTaGTCAATGGTCTTGGGTACAGGCTTTGGTGGAGCCTTATCGCCA | + |
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Preference number: 6 (lower is better) Translates to: SSSLGSTVVSSYTRW*SMVLGTGFGGALSP Trigger: TGGCGATAAGGCTCCACCAAAGCCTGTACCCAAGACCATTGACAACCAGCGAGTGTATGATGAAACCACAGTAGACCCTAATGATGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370654.6 ENST00000370656.5 |
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| CDS CCA 72 bp | TCATTAGGGTCTACTGTGGTTTCATCATACACTCGCTaGTTGTCAATGGTCTTGGGTACAGGCTTTGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: SLGSTVVSSYTR*LSMVLGTGFGG Trigger: TCCACCAAAGCCTGTACCCAAGACCATTGACAACCAGCGAGTGTATGATGAAACCACAGTAGACCCTAATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000370654.6 ENST00000370656.5 |
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| CDS CAA 72 bp | TGTTTCCACCGCGTGAACATTAAGTGTCGCCGCTGTTaGTTTTTAATCTCCGAAATGCTAAAGCCTGGCGGA | + |
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Preference number: 6 (lower is better) Translates to: CFHRVNIKCRRC*FLISEMLKPGG Trigger: TCCGCCAGGCTTTAGCATTTCGGAGATTAAAAACAAACAGCGGCGACACTTAATGTTCACGCGGTGGAAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000370654.6 ENST00000370656.5 |
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| CDS CAA 90 bp | ACTCCTGAATATGTATCTGTGAAATCTGAAGAATATGTAATCCCGTaGATTGTGGAATGTGGCAACCTGCCTTCCGATAAATTGAGGATT | + |
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Preference number: 6 (lower is better) Translates to: TPEYVSVKSEEYVIP*IVECGNLPSDKLRI Trigger: AATCCTCAATTTATCGGAAGGCAGGTTGCCACATTCCACAATCAACGGGATTACATATTCTTCAGATTTCACAGATACATATTCAGGAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS CAA 72 bp | TATGTATCTGTGAAATCTGAAGAATATGTAATCCCGTaGATTGTGGAATGTGGCAACCTGCCTTCCGATAAA | + |
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Preference number: 6 (lower is better) Translates to: YVSVKSEEYVIP*IVECGNLPSDK Trigger: TTTATCGGAAGGCAGGTTGCCACATTCCACAATCAACGGGATTACATATTCTTCAGATTTCACAGATACATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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| CDS TCA 72 bp | ATTATGAGGAAAGAGAGATGCAAACATACGTCCAATTaGATGACCCAGCCGTGTTGTAAAATTATTCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: IMRKERCKHTSN*MTQPCCKIIQN Trigger: ATTCTGAATAATTTTACAACACGGCTGGGTCATTCAATTGGACGTATGTTTGCATCTCTCTTTCCTCATAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000370654.6 |
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