Pregenerated sensors for RPE65 (Homo sapiens)
Ensembl gene IDs: ENSG00000116745Ensembl transcript IDs: ENST00000262340.6
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | ACGGAAAGGTTAACATTCATAAGATTCATAATCTTTGAGCAGTTACGTATACGCCTTTCTGTAAAACATTaGAAAATTGTGCGCATCTGC | + |
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Preference number: 2 (lower is better) Translates to: TERLTFIRFIIFEQLRIRLSVKH*KIVRIC Trigger: GCAGATGCGCACAATTTTGCAATGTTTTACAGAAAG...GCGTATACGTAACTGCTCAAAGATTATGAATCTTATGAATGTTAACCTTTCCGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR TCA 90 bp | AATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAAAATTGAACGAAGGAGACTGCCGGTaGGCCAGAGGGGGATCCTGC | + |
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Preference number: 4 (lower is better) Translates to: NCAHLQVKTMTYSRLKLNEGDCR*ARGGSC Trigger: GCAGGATCCCCCTCTGGCTCACCGGCAGTCTCCTTC...GTTCAATTTTAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR TCA 90 bp | ACATTGCAAAATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTACTGTTACATGAGCTGTaGGCGGCGAGGACAGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: TLQNCAHLQVKTMTYSRLLLHEL*AARTVP Trigger: AGGAACTGTCCTCGCCGCTCACAGCTCATGTAACAG...TAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATTTTGCAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR TCA 90 bp | GAACAGAATTTGATTGCAGACCTGAAGCTGATTTTCTCAGTTTTGCTACCAAAAATCCTGCCTGTTACATaGGCTGTGAGCGGCGAGGAC | + |
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Preference number: 4 (lower is better) Translates to: EQNLIADLKLIFSVLLPKILPVT*AVSGED Trigger: GTCCTCGCCGCTCACAGCTCATGTAACAGGCAGGAT...TTTTGGTAGCAAAACTGAGAAAATCAGCTTCAGGTCTGCAATCAAATTCTGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR GCA 90 bp | AATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAAAATTGAACAGCAGGCTTTTGTCCTaGTCCTGGGCTCACCACCAC | + |
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Preference number: 4 (lower is better) Translates to: NCAHLQVKTMTYSRLKLNSRLLS*SWAHHH Trigger: GTGGTGGTGAGCCCAGGAGCAGGACAAAAGCCTGCT...GTTCAATTTTAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR TCA 90 bp | ACATTGCAAAATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAGAACGTAAGATGGCTTaGATCGGTCACTGCAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: TLQNCAHLQVKTMTYSRLERKMA*IGHCRG Trigger: TCCCCTGCAGTGACCGATTCAAGCCATCTTACGTTC...TAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATTTTGCAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR TCA 90 bp | GAACAGAATTTGATTGCAGACCTGAAGCTGATTTTCTCAGTTTTGCTACCAAAATGCTTGACGAGGCCCTaGAAAGAGAACTTCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: EQNLIADLKLIFSVLLPKCLTRP*KENFRL Trigger: GAGCCTGAAGTTCTCTTTTCAGGGCCTCGTCAAGCA...TTTTGGTAGCAAAACTGAGAAAATCAGCTTCAGGTCTGCAATCAAATTCTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR TCA 90 bp | AATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAAAATTGAACGAGCAGTGGCCCCATTaGCAGAGACATAGTTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: NCAHLQVKTMTYSRLKLNEQWPH*QRHSCK Trigger: TTTGCAACTATGTCTCTGTCAATGGGGCCACTGCTC...GTTCAATTTTAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR GCA 90 bp | ACATTGCAAAATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAGTCACTGCACAGAATTaGAGTGGCAGTTGTATTGGG | + |
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Preference number: 4 (lower is better) Translates to: TLQNCAHLQVKTMTYSRLVTAQN*SGSCIG Trigger: CCCAATACAACTGCCACTGCAATTCTGTGCAGTGAC...TAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATTTTGCAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR CCA 90 bp | ACATTGCAAAATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAAACTTCAAAGAGTCCTaGCCCACATCGAAGGAGACT | + |
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Preference number: 4 (lower is better) Translates to: TLQNCAHLQVKTMTYSRLNFKES*PTSKET Trigger: AGTCTCCTTCGATGTGGGCCAGGACTCTTTGAAGTT...TAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATTTTGCAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR CCA 90 bp | AATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAAAATTGAACTGCACAGAATTGCAGTaGCAGTTGTATTGGGGAGCG | + |
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Preference number: 4 (lower is better) Translates to: NCAHLQVKTMTYSRLKLNCTELQ*QLYWGA Trigger: CGCTCCCCAATACAACTGCCACTGCAATTCTGTGCA...GTTCAATTTTAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR GCA 90 bp | AATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAAAATTGAACTGGATCTTCCTTGTCTaGTTGCAGTGGTGGGATCTT | + |
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Preference number: 4 (lower is better) Translates to: NCAHLQVKTMTYSRLKLNWIFLV*LQWWDL Trigger: AAGATCCCACCACTGCAAGCAGACAAGGAAGATCCA...GTTCAATTTTAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR CCA 90 bp | AATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAAAATTGAACCAGGATCCAGAGTTCTaGCACCAACTGCAGAATGAA | + |
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Preference number: 4 (lower is better) Translates to: NCAHLQVKTMTYSRLKLNQDPEF*HQLQNE Trigger: TTCATTCTGCAGTTGGTGCCAGAACTCTGGATCCTG...GTTCAATTTTAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR CCA 90 bp | GAACAGAATTTGATTGCAGACCTGAAGCTGATTTTCTCAGTTTTGCTACCAAAAATTCTTGCAGGGATCTaGGAAAGCACAGGTGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: EQNLIADLKLIFSVLLPKILAGI*ESTGAK Trigger: TTTGGCACCTGTGCTTTCCCAGATCCCTGCAAGAAT...TTTTGGTAGCAAAACTGAGAAAATCAGCTTCAGGTCTGCAATCAAATTCTGTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR CCA 90 bp | AATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAAAATTGAACGTAATCTTCCCCCACTaGGTAGACATTAACAAGGGC | + |
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Preference number: 4 (lower is better) Translates to: NCAHLQVKTMTYSRLKLNVIFPH*VDINKG Trigger: GCCCTTGTTAATGTCTACCCAGTGGGGGAAGATTAC...GTTCAATTTTAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR CCA 90 bp | GAACAGAATTTGATTGCAGACCTGAAGCTGATTTTCTCAGTTTTGCTACCAAAACTCCTAACTTCAGGTTaGGGAGCCTTTCTGGCATTT | + |
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Preference number: 4 (lower is better) Translates to: EQNLIADLKLIFSVLLPKLLTSG*GAFLAF Trigger: AAATGCCAGAAAGGCTCCCCAACCTGAAGTTAGGAG...TTTTGGTAGCAAAACTGAGAAAATCAGCTTCAGGTCTGCAATCAAATTCTGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR TCA 90 bp | ACGGAAAGGTTAACATTCATAAGATTCATAATCTTTGAGCAGTTACGTATACGCGGAAACTCAAATGCTTaGCGAGGCCCTGAAAAGAGA | + |
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Preference number: 4 (lower is better) Translates to: TERLTFIRFIIFEQLRIRGNSNA*RGPEKR Trigger: TCTCTTTTCAGGGCCTCGTCAAGCATTTGAGTTTCC...GCGTATACGTAACTGCTCAAAGATTATGAATCTTATGAATGTTAACCTTTCCGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR TCA 90 bp | ACGGAAAGGTTAACATTCATAAGATTCATAATCTTTGAGCAGTTACGTATACGCTCCAAGGCATCTGGGTaGGAAACAAAGATGGGTTCT | + |
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Preference number: 4 (lower is better) Translates to: TERLTFIRFIIFEQLRIRSKASG*ETKMGS Trigger: AGAACCCATCTTTGTTTCTCACCCAGATGCCTTGGA...GCGTATACGTAACTGCTCAAAGATTATGAATCTTATGAATGTTAACCTTTCCGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR TCA 90 bp | ACATTGCAAAATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTATGCATGATACTTCCTTaGCTCAGCAAAGCCACATAT | + |
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Preference number: 4 (lower is better) Translates to: TLQNCAHLQVKTMTYSRLCMILP*LSKATY Trigger: ATATGTGGCTTTGCTGAGTCAAGGAAGTATCATGCA...TAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATTTTGCAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR CCA 90 bp | GAACAGAATTTGATTGCAGACCTGAAGCTGATTTTCTCAGTTTTGCTACCAAAAGCAGGATGCTCAACCTaGATAGACATTTTCTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: EQNLIADLKLIFSVLLPKAGCST*IDIFFQ Trigger: CTGGAAGAAAATGTCTATCCAGGTTGAGCATCCTGC...TTTTGGTAGCAAAACTGAGAAAATCAGCTTCAGGTCTGCAATCAAATTCTGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR CCA 90 bp | GAACAGAATTTGATTGCAGACCTGAAGCTGATTTTCTCAGTTTTGCTACCAAAACGGATGAACCTTCTGTaGTATGTGACATGTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EQNLIADLKLIFSVLLPKRMNLL*YVTCPS Trigger: AGAAGGACATGTCACATACCACAGAAGGTTCATCCG...TTTTGGTAGCAAAACTGAGAAAATCAGCTTCAGGTCTGCAATCAAATTCTGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR CCA 90 bp | GAACAGAATTTGATTGCAGACCTGAAGCTGATTTTCTCAGTTTTGCTACCAAAAAACAATCCATGTAGTTaGCTCCCCAAAGACTCCATG | + |
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Preference number: 4 (lower is better) Translates to: EQNLIADLKLIFSVLLPKNNPCS*LPKDSM Trigger: CATGGAGTCTTTGGGGAGCCAACTACATGGATTGTT...TTTTGGTAGCAAAACTGAGAAAATCAGCTTCAGGTCTGCAATCAAATTCTGTTC 40% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR CCA 90 bp | GAACAGAATTTGATTGCAGACCTGAAGCTGATTTTCTCAGTTTTGCTACCAAAATTCTTCCAAGGCATCTaGGTGAGAAACAAAGATGGG | + |
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Preference number: 4 (lower is better) Translates to: EQNLIADLKLIFSVLLPKFFQGI*VRNKDG Trigger: CCCATCTTTGTTTCTCACCCAGATGCCTTGGAAGAA...TTTTGGTAGCAAAACTGAGAAAATCAGCTTCAGGTCTGCAATCAAATTCTGTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR TCA 90 bp | GAACAGAATTTGATTGCAGACCTGAAGCTGATTTTCTCAGTTTTGCTACCAAAATTTTTGTCAGCAATATaGAGCCAAACCCCCATGGTT | + |
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Preference number: 4 (lower is better) Translates to: EQNLIADLKLIFSVLLPKFLSAI*SQTPMV Trigger: AACCATGGGGGTTTGGCTTCATATTGCTGACAAAAA...TTTTGGTAGCAAAACTGAGAAAATCAGCTTCAGGTCTGCAATCAAATTCTGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR TCA 90 bp | ACGGAAAGGTTAACATTCATAAGATTCATAATCTTTGAGCAGTTACGTATACGCTTGTATTGGGGAGCGTaGCTAAATTCTTGCCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: TERLTFIRFIIFEQLRIRLYWGA*LNSCLC Trigger: ACACAGGCAAGAATTTAGTCACGCTCCCCAATACAA...GCGTATACGTAACTGCTCAAAGATTATGAATCTTATGAATGTTAACCTTTCCGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR GCA 90 bp | ACGGAAAGGTTAACATTCATAAGATTCATAATCTTTGAGCAGTTACGTATACGCTTAAAGTCAAACTTGTaGAGGAGGGCTTGCCCATCA | + |
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Preference number: 4 (lower is better) Translates to: TERLTFIRFIIFEQLRIRLKSNL*RRACPS Trigger: TGATGGGCAAGCCCTCCTGCACAAGTTTGACTTTAA...GCGTATACGTAACTGCTCAAAGATTATGAATCTTATGAATGTTAACCTTTCCGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR GCA 90 bp | ACGGAAAGGTTAACATTCATAAGATTCATAATCTTTGAGCAGTTACGTATACGCCCTTTTCTCAGTCATTaGCCGTACGTAAGCATCAGT | + |
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Preference number: 4 (lower is better) Translates to: TERLTFIRFIIFEQLRIRPFLSH*PYVSIS Trigger: ACTGATGCTTACGTACGGGCAATGACTGAGAAAAGG...GCGTATACGTAACTGCTCAAAGATTATGAATCTTATGAATGTTAACCTTTCCGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR GCA 90 bp | ACATTGCAAAATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTATGGAAAATATATTCTTaGAGGGATCTGGGAAAGCAC | + |
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Preference number: 4 (lower is better) Translates to: TLQNCAHLQVKTMTYSRLWKIYS*RDLGKH Trigger: GTGCTTTCCCAGATCCCTGCAAGAATATATTTTCCA...TAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATTTTGCAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR GCA 90 bp | ACGGAAAGGTTAACATTCATAAGATTCATAATCTTTGAGCAGTTACGTATACGCTCTTCCTTGTCTGCTTaGAGTGGTGGGATCTTTACA | + |
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Preference number: 4 (lower is better) Translates to: TERLTFIRFIIFEQLRIRSSLSA*SGGIFT Trigger: TGTAAAGATCCCACCACTGCAAGCAGACAAGGAAGA...GCGTATACGTAACTGCTCAAAGATTATGAATCTTATGAATGTTAACCTTTCCGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR CCA 90 bp | GAACAGAATTTGATTGCAGACCTGAAGCTGATTTTCTCAGTTTTGCTACCAAAAGTCTGCTTGCAGTGGTaGGATCTTTACAATGTTGTA | + |
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Preference number: 4 (lower is better) Translates to: EQNLIADLKLIFSVLLPKVCLQW*DLYNVV Trigger: TACAACATTGTAAAGATCCCACCACTGCAAGCAGAC...TTTTGGTAGCAAAACTGAGAAAATCAGCTTCAGGTCTGCAATCAAATTCTGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR CCA 90 bp | AATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAAAATTGAACCTTGTCTGCTTGCAGTaGTGGGATCTTTACAATGTT | + |
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Preference number: 4 (lower is better) Translates to: NCAHLQVKTMTYSRLKLNLVCLQ*WDLYNV Trigger: AACATTGTAAAGATCCCACCACTGCAAGCAGACAAG...GTTCAATTTTAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR CCA 90 bp | AATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAAAATTGAACACTATGAACGTAAGATaGCTTGAATCGGTCACTGCA | + |
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Preference number: 4 (lower is better) Translates to: NCAHLQVKTMTYSRLKLNTMNVR*LESVTA Trigger: TGCAGTGACCGATTCAAGCCATCTTACGTTCATAGT...GTTCAATTTTAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR CCA 90 bp | AATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAAAATTGAACCCCCCATGGTTTCATTaGACTCAAAACAATCCATGT | + |
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Preference number: 4 (lower is better) Translates to: NCAHLQVKTMTYSRLKLNPPWFH*TQNNPC Trigger: ACATGGATTGTTTTGAGTCCAATGAAACCATGGGGG...GTTCAATTTTAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR CCA 90 bp | AATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAAAATTGAACCTTACAGAGCCTATCTaGAACAAAGTGATTCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: NCAHLQVKTMTYSRLKLNLTEPI*NKVIQA Trigger: GGCTTGAATCACTTTGTTCCAGATAGGCTCTGTAAG...GTTCAATTTTAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR CCA 90 bp | ACATTGCAAAATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAGGTGAGAAACAAAGATaGGTTCTGATGGGTATGAAT | + |
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Preference number: 4 (lower is better) Translates to: TLQNCAHLQVKTMTYSRLGEKQR*VLMGMN Trigger: ATTCATACCCATCAGAACCCATCTTTGTTTCTCACC...TAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATTTTGCAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR CCA 90 bp | GAACAGAATTTGATTGCAGACCTGAAGCTGATTTTCTCAGTTTTGCTACCAAAAAGAGTTTTTCAGTTATaGCCTGTCTCACAGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: EQNLIADLKLIFSVLLPKRVFQL*PVSQRK Trigger: CTTCCTCTGTGAGACAGGCCATAACTGAAAAACTCT...TTTTGGTAGCAAAACTGAGAAAATCAGCTTCAGGTCTGCAATCAAATTCTGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR TCA 90 bp | GAACAGAATTTGATTGCAGACCTGAAGCTGATTTTCTCAGTTTTGCTACCAAAATGCCAAATTCTGTTATaGCGATCCTTTTCTCAGTCA | + |
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Preference number: 4 (lower is better) Translates to: EQNLIADLKLIFSVLLPKCQILL*RSFSQS Trigger: TGACTGAGAAAAGGATCGTCATAACAGAATTTGGCA...TTTTGGTAGCAAAACTGAGAAAATCAGCTTCAGGTCTGCAATCAAATTCTGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR TCA 90 bp | GAACAGAATTTGATTGCAGACCTGAAGCTGATTTTCTCAGTTTTGCTACCAAAATTGTACAACGATCTCTaGCTTGCTTATTGGATCTTC | + |
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Preference number: 4 (lower is better) Translates to: EQNLIADLKLIFSVLLPKLYNDL*LAYWIF Trigger: GAAGATCCAATAAGCAAGTCAGAGATCGTTGTACAA...TTTTGGTAGCAAAACTGAGAAAATCAGCTTCAGGTCTGCAATCAAATTCTGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR TCA 90 bp | ACGGAAAGGTTAACATTCATAAGATTCATAATCTTTGAGCAGTTACGTATACGCCTATCTGGAACAAAGTaGTTCAAGCCAAGTCCATAC | + |
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Preference number: 4 (lower is better) Translates to: TERLTFIRFIIFEQLRIRLSGTK*FKPSPY Trigger: GTATGGACTTGGCTTGAATCACTTTGTTCCAGATAG...GCGTATACGTAACTGCTCAAAGATTATGAATCTTATGAATGTTAACCTTTCCGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR TCA 90 bp | AATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAAAATTGAACTTAAGCCTTATTGCATaGTACTTCCTTGACTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: NCAHLQVKTMTYSRLKLNLSLIA*YFLDSA Trigger: TGCTGAGTCAAGGAAGTATCATGCAATAAGGCTTAA...GTTCAATTTTAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR GCA 90 bp | AATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAAAATTGAACTTGCAAAGATCAACCTaGTTAATTGTCTCCAAGGTC | + |
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Preference number: 4 (lower is better) Translates to: NCAHLQVKTMTYSRLKLNLQRST*LIVSKV Trigger: GACCTTGGAGACAATTAAGCAGGTTGATCTTTGCAA...GTTCAATTTTAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR GCA 90 bp | GAACAGAATTTGATTGCAGACCTGAAGCTGATTTTCTCAGTTTTGCTACCAAAACAACGATCTCTGACTTaGTTATTGGATCTTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: EQNLIADLKLIFSVLLPKQRSLT*LLDLPC Trigger: ACAAGGAAGATCCAATAAGCAAGTCAGAGATCGTTG...TTTTGGTAGCAAAACTGAGAAAATCAGCTTCAGGTCTGCAATCAAATTCTGTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR GCA 90 bp | ACATTGCAAAATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAACCAAAAACATATCTTaGTGGAGTATGCTCAAGATT | + |
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Preference number: 4 (lower is better) Translates to: TLQNCAHLQVKTMTYSRLTKNIS*WSMLKI Trigger: AATCTTGAGCATACTCCAGCAAGATATGTTTTTGGT...TAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATTTTGCAATGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR CCA 90 bp | GAACAGAATTTGATTGCAGACCTGAAGCTGATTTTCTCAGTTTTGCTACCAAAAAAACAGGTGGTAAAATaGCTCAGATCCAACTTCAAA | + |
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Preference number: 4 (lower is better) Translates to: EQNLIADLKLIFSVLLPKKQVVK*LRSNFK Trigger: TTTGAAGTTGGATCTGAGCCATTTTACCACCTGTTT...TTTTGGTAGCAAAACTGAGAAAATCAGCTTCAGGTCTGCAATCAAATTCTGTTC 37% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR CCA 90 bp | AATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAAAATTGAACCAGGTTAATTTTGACTaGTGTCTCCACAAAAACGAT | + |
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Preference number: 4 (lower is better) Translates to: NCAHLQVKTMTYSRLKLNQVNFD*CLHKND Trigger: ATCGTTTTTGTGGAGACACCAGTCAAAATTAACCTG...GTTCAATTTTAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR TCA 90 bp | ACGGAAAGGTTAACATTCATAAGATTCATAATCTTTGAGCAGTTACGTATACGCTTGAGAGGCCTCAGTTaGTTAAACACAGATTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: TERLTFIRFIIFEQLRIRLRGLS*LNTDFL Trigger: AAGAAAATCTGTGTTTAATCAACTGAGGCCTCTCAA...GCGTATACGTAACTGCTCAAAGATTATGAATCTTATGAATGTTAACCTTTCCGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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| CDS-3UTR GCA 90 bp | ACGGAAAGGTTAACATTCATAAGATTCATAATCTTTGAGCAGTTACGTATACGCTATGAATCAGGCTCTTaGCAAACCCAAGTTTCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TERLTFIRFIIFEQLRIRYESGS*QTQVSL Trigger: TAAAGAAACTTGGGTTTGGCAAGAGCCTGATTCATA...GCGTATACGTAACTGCTCAAAGATTATGAATCTTATGAATGTTAACCTTTCCGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS-3UTR CCA 90 bp | AATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAAAATTGAACCAAAAACGATATAGTTaGGAGTCAGACCAAAACTAT | + |
|
Preference number: 4 (lower is better) Translates to: NCAHLQVKTMTYSRLKLNQKRYS*ESDQNY Trigger: ATAGTTTTGGTCTGACTCCCAACTATATCGTTTTTG...GTTCAATTTTAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS-3UTR CCA 90 bp | ACGGAAAGGTTAACATTCATAAGATTCATAATCTTTGAGCAGTTACGTATACGCTTAGATGATAGTCCCTaGTTTGAGAAAAAGTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TERLTFIRFIIFEQLRIRLDDSP*FEKKFG Trigger: ACCAAACTTTTTCTCAAACCAGGGACTATCATCTAA...GCGTATACGTAACTGCTCAAAGATTATGAATCTTATGAATGTTAACCTTTCCGT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS CCA 90 bp | GTCAAACTTGTGCAGGAGGGCTTGCCCATCAAACAGGTGGTAAAATaGCTCAGATCCAACTTCAAAGAGTCCTGGCCCACATCGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: VKLVQEGLPIKQVVK*LRSNFKESWPTSKE Trigger: CTCCTTCGATGTGGGCCAGGACTCTTTGAAGTTGGATCTGAGCCATTTTACCACCTGTTTGATGGGCAAGCCCTCCTGCACAAGTTTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS TCA 90 bp | AGATGGCTTGAATCGGTCACTGCAGGGGAATTGTACAACGATCTCTaGCTTGCTTATTGGATCTTCCTTGTCTGCTTGCAGTGGTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RWLESVTAGELYNDL*LAYWIFLVCLQWWD Trigger: ATCCCACCACTGCAAGCAGACAAGGAAGATCCAATAAGCAAGTCAGAGATCGTTGTACAATTCCCCTGCAGTGACCGATTCAAGCCATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS GCA 90 bp | AGCACAGGTGCCAAATTCTGTTATGACGATCCTTTTCTCAGTCATTaGCCGTACGTAAGCATCAGTGCGGATGAACCTTCTGTGGTATGT | + |
|
Preference number: 5 (lower is better) Translates to: STGAKFCYDDPFLSH*PYVSISADEPSVVC Trigger: ACATACCACAGAAGGTTCATCCGCACTGATGCTTACGTACGGGCAATGACTGAGAAAAGGATCGTCATAACAGAATTTGGCACCTGTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS TCA 90 bp | TCTCGTCACTGCACAGAATTGCAGTGGCAGTTGTATTGGGGAGCGTaGCTAAATTCTTGCCTGTGTCAGCCTTGTCAATATTCAAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SRHCTELQWQLYWGA*LNSCLCQPCQYSKE Trigger: TTCCTTTGAATATTGACAAGGCTGACACAGGCAAGAATTTAGTCACGCTCCCCAATACAACTGCCACTGCAATTCTGTGCAGTGACGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS-3UTR CAA 90 bp | ACGGAAAGGTTAACATTCATAAGATTCATAATCTTTGAGCAGTTACGTATACGCCTTGTGCAGGAGGGCTaGCCCATCAAACAGGTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: TERLTFIRFIIFEQLRIRLVQEG*PIKQVV Trigger: TACCACCTGTTTGATGGGCAAGCCCTCCTGCACAAG...GCGTATACGTAACTGCTCAAAGATTATGAATCTTATGAATGTTAACCTTTCCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS-3UTR CAA 90 bp | AATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAAAATTGAACCTTATTGGATCTTCCTaGTCTGCTTGCAGTGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: NCAHLQVKTMTYSRLKLNLIGSS*SACSGG Trigger: CCCACCACTGCAAGCAGACAAGGAAGATCCAATAAG...GTTCAATTTTAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS-3UTR CAA 90 bp | GAACAGAATTTGATTGCAGACCTGAAGCTGATTTTCTCAGTTTTGCTACCAAAATCTCCTAACTTCAGGTaGGGGAGCCTTTCTGGCATT | + |
|
Preference number: 5 (lower is better) Translates to: EQNLIADLKLIFSVLLPKSPNFR*GSLSGI Trigger: AATGCCAGAAAGGCTCCCCAACCTGAAGTTAGGAGA...TTTTGGTAGCAAAACTGAGAAAATCAGCTTCAGGTCTGCAATCAAATTCTGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS-3UTR CAA 90 bp | AATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAAAATTGAACCGTCACTGCACAGAATaGCAGTGGCAGTTGTATTGG | + |
|
Preference number: 5 (lower is better) Translates to: NCAHLQVKTMTYSRLKLNRHCTE*QWQLYW Trigger: CCAATACAACTGCCACTGCAATTCTGTGCAGTGACG...GTTCAATTTTAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS-3UTR CAA 90 bp | GAACAGAATTTGATTGCAGACCTGAAGCTGATTTTCTCAGTTTTGCTACCAAAATCTTTAAAGTCAAACTaGTGCAGGAGGGCTTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: EQNLIADLKLIFSVLLPKSLKSN*CRRACP Trigger: TGGGCAAGCCCTCCTGCACAAGTTTGACTTTAAAGA...TTTTGGTAGCAAAACTGAGAAAATCAGCTTCAGGTCTGCAATCAAATTCTGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS-3UTR CAA 90 bp | AATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAAAATTGAACTCCTTTTCTCAGTCATaGCCCGTACGTAAGCATCAG | + |
|
Preference number: 5 (lower is better) Translates to: NCAHLQVKTMTYSRLKLNSFSQS*PVRKHQ Trigger: CTGATGCTTACGTACGGGCAATGACTGAGAAAAGGA...GTTCAATTTTAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS-3UTR CAA 90 bp | GAACAGAATTTGATTGCAGACCTGAAGCTGATTTTCTCAGTTTTGCTACCAAAAATCTTCCTTGTCTGCTaGCAGTGGTGGGATCTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: EQNLIADLKLIFSVLLPKIFLVC*QWWDLY Trigger: GTAAAGATCCCACCACTGCAAGCAGACAAGGAAGAT...TTTTGGTAGCAAAACTGAGAAAATCAGCTTCAGGTCTGCAATCAAATTCTGTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS-3UTR CAA 90 bp | GAACAGAATTTGATTGCAGACCTGAAGCTGATTTTCTCAGTTTTGCTACCAAAAAGCGTGACTAAATTCTaGCCTGTGTCAGCCTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: EQNLIADLKLIFSVLLPKSVTKF*PVSALS Trigger: TGACAAGGCTGACACAGGCAAGAATTTAGTCACGCT...TTTTGGTAGCAAAACTGAGAAAATCAGCTTCAGGTCTGCAATCAAATTCTGTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS-3UTR CAA 90 bp | ACGGAAAGGTTAACATTCATAAGATTCATAATCTTTGAGCAGTTACGTATACGCGCAGTGGCAGTTGTATaGGGGAGCGTGACTAAATTC | + |
|
Preference number: 5 (lower is better) Translates to: TERLTFIRFIIFEQLRIRAVAVV*GSVTKF Trigger: GAATTTAGTCACGCTCCCCAATACAACTGCCACTGC...GCGTATACGTAACTGCTCAAAGATTATGAATCTTATGAATGTTAACCTTTCCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS-3UTR CAA 90 bp | ACATTGCAAAATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAACATTAACAAGGGCATaGTCAGTAACCTCTACTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TLQNCAHLQVKTMTYSRLTLTRA*SVTSTP Trigger: AGGAGTAGAGGTTACTGACAATGCCCTTGTTAATGT...TAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATTTTGCAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS-3UTR CAA 90 bp | ACATTGCAAAATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTATTGCCTGTGTCAGCCTaGTCAATATTCAAAGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: TLQNCAHLQVKTMTYSRLLPVSA*SIFKGS Trigger: ACTTCCTTTGAATATTGACAAGGCTGACACAGGCAA...TAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATTTTGCAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS-3UTR CAA 90 bp | ACATTGCAAAATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAACTTCACTTAAGTCCTaGGCATTCAGAATCAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TLQNCAHLQVKTMTYSRLTSLKS*AFRIRR Trigger: TCTCCTGATTCTGAATGCCAAGGACTTAAGTGAAGT...TAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATTTTGCAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS CCA 90 bp | GACATAGTTGCAAAGATCAACCTGCTTAATTGTCTCCAAGGTCTCTaGATTAATCTTTGTAATAAAGTTGGTCTCTGTGCAAGCGTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: DIVAKINLLNCLQGL*INLCNKVGLCASVV Trigger: TACTACGCTTGCACAGAGACCAACTTTATTACAAAGATTAATCCAGAGACCTTGGAGACAATTAAGCAGGTTGATCTTTGCAACTATGTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS-3UTR CAA 90 bp | AATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAAAATTGAACTCTCTGACTTGCTTATaGGATCTTCCTTGTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: NCAHLQVKTMTYSRLKLNSLTCL*DLPCLL Trigger: AAGCAGACAAGGAAGATCCAATAAGCAAGTCAGAGA...GTTCAATTTTAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS-3UTR CAA 90 bp | GAACAGAATTTGATTGCAGACCTGAAGCTGATTTTCTCAGTTTTGCTACCAAAAACAACGATCTCTGACTaGCTTATTGGATCTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EQNLIADLKLIFSVLLPKTTISD*LIGSSL Trigger: CAAGGAAGATCCAATAAGCAAGTCAGAGATCGTTGT...TTTTGGTAGCAAAACTGAGAAAATCAGCTTCAGGTCTGCAATCAAATTCTGTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS-3UTR CAA 90 bp | ACGGAAAGGTTAACATTCATAAGATTCATAATCTTTGAGCAGTTACGTATACGCACCCCCATGGTTTCATaGGACTCAAAACAATCCATG | + |
|
Preference number: 5 (lower is better) Translates to: TERLTFIRFIIFEQLRIRTPMVS*DSKQSM Trigger: CATGGATTGTTTTGAGTCCAATGAAACCATGGGGGT...GCGTATACGTAACTGCTCAAAGATTATGAATCTTATGAATGTTAACCTTTCCGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS-3UTR CAA 90 bp | GAACAGAATTTGATTGCAGACCTGAAGCTGATTTTCTCAGTTTTGCTACCAAAATTGCATGATACTTCCTaGACTCAGCAAAGCCACATA | + |
|
Preference number: 5 (lower is better) Translates to: EQNLIADLKLIFSVLLPKLHDTS*TQQSHI Trigger: TATGTGGCTTTGCTGAGTCAAGGAAGTATCATGCAA...TTTTGGTAGCAAAACTGAGAAAATCAGCTTCAGGTCTGCAATCAAATTCTGTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS-3UTR CAA 90 bp | ACGGAAAGGTTAACATTCATAAGATTCATAATCTTTGAGCAGTTACGTATACGCTCTCTGAGATGTTATTaGGTTGAGAGGCCTCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TERLTFIRFIIFEQLRIRSLRCY*VERPQL Trigger: CAACTGAGGCCTCTCAACCAAATAACATCTCAGAGA...GCGTATACGTAACTGCTCAAAGATTATGAATCTTATGAATGTTAACCTTTCCGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS-3UTR CAA 90 bp | ACGGAAAGGTTAACATTCATAAGATTCATAATCTTTGAGCAGTTACGTATACGCCTGGAAAATATATTCTaGCAGGGATCTGGGAAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TERLTFIRFIIFEQLRIRLENIF*QGSGKA Trigger: TGCTTTCCCAGATCCCTGCAAGAATATATTTTCCAG...GCGTATACGTAACTGCTCAAAGATTATGAATCTTATGAATGTTAACCTTTCCGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS-3UTR CAA 90 bp | AATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAAAATTGAACGTTGAGAGGCCTCAGTaGATTAAACACAGATTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: NCAHLQVKTMTYSRLKLNVERPQ*IKHRFS Trigger: AGAAAATCTGTGTTTAATCAACTGAGGCCTCTCAAC...GTTCAATTTTAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS-3UTR CAA 90 bp | AATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAAAATTGAACTTGAACAGGTTAATTTaGACTGGTGTCTCCACAAAA | + |
|
Preference number: 5 (lower is better) Translates to: NCAHLQVKTMTYSRLKLNLNRLI*TGVSTK Trigger: TTTTGTGGAGACACCAGTCAAAATTAACCTGTTCAA...GTTCAATTTTAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS-3UTR CAA 90 bp | AATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAAAATTGAACCTTCTGGTAATTGATTaGAGGAAACTCAAATGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NCAHLQVKTMTYSRLKLNLLVID*RKLKCL Trigger: CAAGCATTTGAGTTTCCTCAAATCAATTACCAGAAG...GTTCAATTTTAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS-3UTR CAA 90 bp | AATTGTGCGCATCTGCAAGTTAAAACCATGACATATAGCAGGCTAAAATTGAACTACCAAAAACATATCTaGCTGGAGTATGCTCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: NCAHLQVKTMTYSRLKLNYQKHI*LEYAQD Trigger: ATCTTGAGCATACTCCAGCAAGATATGTTTTTGGTA...GTTCAATTTTAGCCTGCTATATGTCATGGTTTTAACTTGCAGATGCGCACAATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS-3UTR CAA 90 bp | GAACAGAATTTGATTGCAGACCTGAAGCTGATTTTCTCAGTTTTGCTACCAAAAAAAATTGAACAGAATTaGATTGCAGACCTGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EQNLIADLKLIFSVLLPKKIEQN*IADLKL Trigger: CAGCTTCAGGTCTGCAATCAAATTCTGTTCAATTTT...TTTTGGTAGCAAAACTGAGAAAATCAGCTTCAGGTCTGCAATCAAATTCTGTTC 37% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS-3UTR CAA 90 bp | ACGGAAAGGTTAACATTCATAAGATTCATAATCTTTGAGCAGTTACGTATACGCCAAGTTTCTTTAGTTTaGACATTCAGCTTACAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TERLTFIRFIIFEQLRIRQVSLV*TFSLQS Trigger: GCTCTGTAAGCTGAATGTCAAAACTAAAGAAACTTG...GCGTATACGTAACTGCTCAAAGATTATGAATCTTATGAATGTTAACCTTTCCGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS TCA 72 bp | CAAAGAGTCCTGGCCCACATCGAAGGAGACTGCCGGTaGGCCAGAGGGGGATCCTGCCTGTTACATGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: QRVLAHIEGDCR*ARGGSCLLHEL Trigger: CAGCTCATGTAACAGGCAGGATCCCCCTCTGGCTCACCGGCAGTCTCCTTCGATGTGGGCCAGGACTCTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS GCA 72 bp | GGCATTCAGAATCAGGAGATAAGCAGGCTTTTGTCCTaGTCCTGGGCTCACCACCACACTCAGAACTACACC | + |
|
Preference number: 6 (lower is better) Translates to: GIQNQEISRLLS*SWAHHHTQNYT Trigger: GGTGTAGTTCTGAGTGTGGTGGTGAGCCCAGGAGCAGGACAAAAGCCTGCTTATCTCCTGATTCTGAATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS CCA 72 bp | GTTGGTCTCTGTGCAAGCGTAGTAATCTTCCCCCACTaGGTAGACATTAACAAGGGCATTGTCAGTAACCTC | + |
|
Preference number: 6 (lower is better) Translates to: VGLCASVVIFPH*VDINKGIVSNL Trigger: GAGGTTACTGACAATGCCCTTGTTAATGTCTACCCAGTGGGGGAAGATTACTACGCTTGCACAGAGACCAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS CAA 72 bp | CGGTCACTGCAGGGGAATTGTACAACGATCTCTGACTaGCTTATTGGATCTTCCTTGTCTGCTTGCAGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: RSLQGNCTTISD*LIGSSLSACSG Trigger: ACCACTGCAAGCAGACAAGGAAGATCCAATAAGCAAGTCAGAGATCGTTGTACAATTCCCCTGCAGTGACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS CAA 90 bp | GGCTTGAATCGGTCACTGCAGGGGAATTGTACAACGATCTCTGACTaGCTTATTGGATCTTCCTTGTCTGCTTGCAGTGGTGGGATCTTT | + |
|
Preference number: 6 (lower is better) Translates to: GLNRSLQGNCTTISD*LIGSSLSACSGGIF Trigger: AAAGATCCCACCACTGCAAGCAGACAAGGAAGATCCAATAAGCAAGTCAGAGATCGTTGTACAATTCCCCTGCAGTGACCGATTCAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS CAA 90 bp | AGCCAGATAGTCTCGTCACTGCACAGAATTGCAGTGGCAGTTGTATaGGGGAGCGTGACTAAATTCTTGCCTGTGTCAGCCTTGTCAATA | + |
|
Preference number: 6 (lower is better) Translates to: SQIVSSLHRIAVAVV*GSVTKFLPVSALSI Trigger: TATTGACAAGGCTGACACAGGCAAGAATTTAGTCACGCTCCCCAATACAACTGCCACTGCAATTCTGTGCAGTGACGAGACTATCTGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS TCA 72 bp | GAATCGGTCACTGCAGGGGAATTGTACAACGATCTCTaGCTTGCTTATTGGATCTTCCTTGTCTGCTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ESVTAGELYNDL*LAYWIFLVCLQ Trigger: CTGCAAGCAGACAAGGAAGATCCAATAAGCAAGTCAGAGATCGTTGTACAATTCCCCTGCAGTGACCGATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS CAA 72 bp | TGCAGGGGAATTGTACAACGATCTCTGACTTGCTTATaGGATCTTCCTTGTCTGCTTGCAGTGGTGGGATCT | + |
|
Preference number: 6 (lower is better) Translates to: CRGIVQRSLTCL*DLPCLLAVVGS Trigger: AGATCCCACCACTGCAAGCAGACAAGGAAGATCCAATAAGCAAGTCAGAGATCGTTGTACAATTCCCCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS TCA 72 bp | TGGGAGTCAGACCAAAACTATGAACGTAAGATGGCTTaGATCGGTCACTGCAGGGGAATTGTACAACGATCT | + |
|
Preference number: 6 (lower is better) Translates to: WESDQNYERKMA*IGHCRGIVQRS Trigger: AGATCGTTGTACAATTCCCCTGCAGTGACCGATTCAAGCCATCTTACGTTCATAGTTTTGGTCTGACTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS CAA 72 bp | ATGTCCTTCTTTAAAGTCAAACTTGTGCAGGAGGGCTaGCCCATCAAACAGGTGGTAAAATGGCTCAGATCC | + |
|
Preference number: 6 (lower is better) Translates to: MSFFKVKLVQEG*PIKQVVKWLRS Trigger: GGATCTGAGCCATTTTACCACCTGTTTGATGGGCAAGCCCTCCTGCACAAGTTTGACTTTAAAGAAGGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS CAA 72 bp | GCAGTGGCAGTTGTATTGGGGAGCGTGACTAAATTCTaGCCTGTGTCAGCCTTGTCAATATTCAAAGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: AVAVVLGSVTKF*PVSALSIFKGS Trigger: ACTTCCTTTGAATATTGACAAGGCTGACACAGGCAAGAATTTAGTCACGCTCCCCAATACAACTGCCACTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS CCA 72 bp | ATAGTTGGGAGTCAGACCAAAACTATGAACGTAAGATaGCTTGAATCGGTCACTGCAGGGGAATTGTACAAC | + |
|
Preference number: 6 (lower is better) Translates to: IVGSQTKTMNVR*LESVTAGELYN Trigger: GTTGTACAATTCCCCTGCAGTGACCGATTCAAGCCATCTTACGTTCATAGTTTTGGTCTGACTCCCAACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS CAA 90 bp | GTATGTGACATGTCCTTCTTTAAAGTCAAACTTGTGCAGGAGGGCTaGCCCATCAAACAGGTGGTAAAATGGCTCAGATCCAACTTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: VCDMSFFKVKLVQEG*PIKQVVKWLRSNFK Trigger: TTTGAAGTTGGATCTGAGCCATTTTACCACCTGTTTGATGGGCAAGCCCTCCTGCACAAGTTTGACTTTAAAGAAGGACATGTCACATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS TCA 72 bp | AGAACTACACCATCATCTTCTTCCAAGGCATCTGGGTaGGAAACAAAGATGGGTTCTGATGGGTATGAATCA | + |
|
Preference number: 6 (lower is better) Translates to: RTTPSSSSKASG*ETKMGSDGYES Trigger: TGATTCATACCCATCAGAACCCATCTTTGTTTCTCACCCAGATGCCTTGGAAGAAGATGATGGTGTAGTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS TCA 72 bp | CATATGTGTAAGGTTTCCCACAATACTTCTGGTAATTaGTTTGAGGAAACTCAAATGCTTGACGAGGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: HMCKVSHNTSGN*FEETQMLDEAL Trigger: CAGGGCCTCGTCAAGCATTTGAGTTTCCTCAAATCAATTACCAGAAGTATTGTGGGAAACCTTACACATATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262340.6 |
||
| CDS CCA 72 bp | GCAAAGATCAACCTGCTTAATTGTCTCCAAGGTCTCTaGATTAATCTTTGTAATAAAGTTGGTCTCTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: AKINLLNCLQGL*INLCNKVGLCA Trigger: TGCACAGAGACCAACTTTATTACAAAGATTAATCCAGAGACCTTGGAGACAATTAAGCAGGTTGATCTTTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000262340.6 |
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