Pregenerated sensors for RPAP3 (Homo sapiens)
Ensembl gene IDs: ENSG00000005175Ensembl transcript IDs: ENST00000005386.8, ENST00000380650.4, ENST00000432584.7, ENST00000547706.1, ENST00000548211.1, ENST00000548296.1, ENST00000551293.1
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCGTAGATGGTGCCTTCTTATGTGTCCTTACATGGTGTAATTGGTaGACAAGCTCTCTGGGGCCTCTTTTACAAGGGCCTGCCCTCTTG | + |
|
Preference number: 1 (lower is better) Translates to: FVDGAFLCVLTWCNW*TSSLGPLLQGPALL Trigger: CAAGAGGGCAGGCCCTTGTAAAAGAGGCCCCAGAGAGCTTGTTCACCAATTACACCATGTAAGGACACATAAGAAGGCACCATCTACGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| 3UTR-3UTR CCA 90 bp | TACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTGGTGAACAAGCTCTCTaGGGCCTCTTTTACAAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: YSSGGWGVQDEDASRFWSGEQAL*GLFYKG Trigger: GCCCTTGTAAAAGAGGCCCCAGAGAGCTTGTTCACC...AGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| 3UTR-3UTR GCA 90 bp | AGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTCTGAACTGGTTTTACCAGTaGTTACACCATGCCCAAAAA | + |
|
Preference number: 2 (lower is better) Translates to: SSGGWGVQDEDASRFWSLNWFYQ*LHHAQK Trigger: TTTTTGGGCATGGTGTAAGCACTGGTAAAACCAGTT...CAGAGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| 3UTR TCA 72 bp | GGTGCCTTCTTATGTGTCCTTACATGGTGTAATTGGTaGACAAGCTCTCTGGGGCCTCTTTTACAAGGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: GAFLCVLTWCNW*TSSLGPLLQGP Trigger: AGGCCCTTGTAAAAGAGGCCCCAGAGAGCTTGTTCACCAATTACACCATGTAAGGACACATAAGAAGGCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| 3UTR GCA 72 bp | ACCAGTGCTTACACCATGCCCAAAAATTTGCTAGGCTaGTACTTTAAACATTTACTTAATATGATTCTTGCG | + |
|
Preference number: 3 (lower is better) Translates to: TSAYTMPKNLLG*YFKHLLNMILA Trigger: CGCAAGAATCATATTAAGTAAATGTTTAAAGTAGCAGCCTAGCAAATTTTTGGGCATGGTGTAAGCACTGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| 3UTR GCA 72 bp | GTTTCTTCAAAGGATCATACCGTAGTCCATTCGGGTTaGTATAATAAAATATCAAACTGGGTAGCTTACATT | + |
|
Preference number: 3 (lower is better) Translates to: VSSKDHTVVHSG*YNKISNWVAYI Trigger: AATGTAAGCTACCCAGTTTGATATTTTATTATAGCAACCCGAATGGACTACGGTATGATCCTTTGAAGAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| 3UTR TCA 72 bp | TTAACCACTATGCTATTTTGCAATAAGGCAACAATATaGCAGCCCCTAAAGACTGTTCTTTATTCTAATCAC | + |
|
Preference number: 3 (lower is better) Translates to: LTTMLFCNKATI*QPLKTVLYSNH Trigger: GTGATTAGAATAAAGAACAGTCTTTAGGGGCTGTCATATTGTTGCCTTATTGCAAAATAGCATAGTGGTTAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR GCA 90 bp | TACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTCGTAACCCGCCGCACTaGCACCCCGTCAGCCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: YSSGGWGVQDEDASRFWSRNPPH*HPVSPA Trigger: TGCGGGGCTGACGGGGTGGCAGTGCGGCGGGTTACG...AGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR TCA 90 bp | AGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTCTGCCCCCGATCTTTCTCTaGAATGGCCTGCTGCTTATT | + |
|
Preference number: 4 (lower is better) Translates to: SSGGWGVQDEDASRFWSLPPIFL*NGLLLI Trigger: AATAAGCAGCAGGCCATTTCAGAGAAAGATCGGGGG...CAGAGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CCA 90 bp | GTGCAAACGTCTGTGCTAGGTACTATGCAGAGTACAGGGATGAGCAGAGTTCTAGGTGAACAAGCTCTCTaGGGCCTCTTTTACAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VQTSVLGTMQSTGMSRVLGEQAL*GLFYKG Trigger: GCCCTTGTAAAAGAGGCCCCAGAGAGCTTGTTCACC...TAGAACTCTGCTCATCCCTGTACTCTGCATAGTACCTAGCACAGACGTTTGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR TCA 90 bp | TACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTCTTGAGTGGTTTAGTTaGTCCAGGATGCGGTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: YSSGGWGVQDEDASRFWSLEWFS*SRMRWI Trigger: AATCCACCGCATCCTGGATCAACTAAACCACTCAAG...AGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR GCA 90 bp | AGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTCTGATTAGCACCATCTGCTaGTATCCCTCGAGTATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSGGWGVQDEDASRFWSLISTIC*YPSSIA Trigger: TGCTATACTCGAGGGATAGCAGCAGATGGTGCTAAT...CAGAGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR GCA 90 bp | TACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTGAGCTGGAACGAGTTTaGAGGAATTGGAGGAAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: YSSGGWGVQDEDASRFWSELERV*RNWRKN Trigger: GTTCTTCCTCCAATTCCTGCAAACTCGTTCCAGCTC...AGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR GCA 90 bp | GTGCAAACGTCTGTGCTAGGTACTATGCAGAGTACAGGGATGAGCAGAGTTCTATCTTTTACAAGGGCCTaGCCTCTTGACCCAATCACT | + |
|
Preference number: 4 (lower is better) Translates to: VQTSVLGTMQSTGMSRVLSFTRA*PLDPIT Trigger: AGTGATTGGGTCAAGAGGGCAGGCCCTTGTAAAAGA...TAGAACTCTGCTCATCCCTGTACTCTGCATAGTACCTAGCACAGACGTTTGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CCA 90 bp | TACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTCATAGCTCTGTTAGCTaGAAGAAGGGCATTAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: YSSGGWGVQDEDASRFWSHSSVS*KKGIST Trigger: GGTGCTAATGCCCTTCTTCCAGCTAACAGAGCTATG...AGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CCA 90 bp | GTGCAAACGTCTGTGCTAGGTACTATGCAGAGTACAGGGATGAGCAGAGTTCTACGAGTTTGCAGGAATTaGAGGAAGAACAGTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VQTSVLGTMQSTGMSRVLRVCRN*RKNSCG Trigger: GCCACAACTGTTCTTCCTCCAATTCCTGCAAACTCG...TAGAACTCTGCTCATCCCTGTACTCTGCATAGTACCTAGCACAGACGTTTGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CCA 90 bp | TACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTGATGCCAGTAGATTCTaGTCTCTGGTGTCTGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: YSSGGWGVQDEDASRFWSDASRF*SLVSGE Trigger: TTCACCAGACACCAGAGACCAGAATCTACTGGCATC...AGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR TCA 90 bp | GTGCAAACGTCTGTGCTAGGTACTATGCAGAGTACAGGGATGAGCAGAGTTCTACAGTCTAAAATATGCTaGCGCTCTGTTCGTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: VQTSVLGTMQSTGMSRVLQSKIC*RSVRWQ Trigger: TTGCCAACGAACAGAGCGTCAGCATATTTTAGACTG...TAGAACTCTGCTCATCCCTGTACTCTGCATAGTACCTAGCACAGACGTTTGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR GCA 90 bp | AGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTCTGTTCTCTGAAATGGCCTaGTGCTTATTCTGTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SSGGWGVQDEDASRFWSLFSEMA*CLFCCA Trigger: AGCACAACAGAATAAGCAGCAGGCCATTTCAGAGAA...CAGAGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR GCA 90 bp | AGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTCTGTCTTCTTACTTGTGGTaGCTGTGGCTGCTATTACAT | + |
|
Preference number: 4 (lower is better) Translates to: SSGGWGVQDEDASRFWSLSSYLW*LWLLLH Trigger: ATGTAATAGCAGCCACAGGCACCACAAGTAAGAAGA...CAGAGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTCTGGAGGAAGAACAGTTGTaGCAAACTGAGCAGGTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSGGWGVQDEDASRFWSLEEEQL*QTEQVF Trigger: AAAAACCTGCTCAGTTTGCCACAACTGTTCTTCCTC...CAGAGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CCA 90 bp | GTGCAAACGTCTGTGCTAGGTACTATGCAGAGTACAGGGATGAGCAGAGTTCTATACAGTTCTGGAGGATaGGGAGTCCAAGATGAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VQTSVLGTMQSTGMSRVLYSSGG*GVQDED Trigger: ATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTA...TAGAACTCTGCTCATCCCTGTACTCTGCATAGTACCTAGCACAGACGTTTGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR TCA 90 bp | TACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTTTGGATGCTAAAGCCTaGCTGATTTTCCTGAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YSSGGWGVQDEDASRFWSLDAKA*LIFLSS Trigger: TGAACTCAGGAAAATCAGTCAGGCTTTAGCATCCAA...AGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR TCA 90 bp | GTGCAAACGTCTGTGCTAGGTACTATGCAGAGTACAGGGATGAGCAGAGTTCTAACAGTTGTGGCAAACTaGGCAGGTTTTTGTTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: VQTSVLGTMQSTGMSRVLTVVAN*AGFCSI Trigger: GATAGAACAAAAACCTGCTCAGTTTGCCACAACTGT...TAGAACTCTGCTCATCCCTGTACTCTGCATAGTACCTAGCACAGACGTTTGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR TCA 90 bp | AGAGTTCTAGCCCTACTTTCAAAAGTTTACAAACGCTACACTCACATCCAACAAAAGGGCCTGCCCTCTTaGCCCAATCACTTCCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RVLALLSKVYKRYTHIQQKGLPS*PNHFPK Trigger: CTTTGGGAAGTGATTGGGTCAAGAGGGCAGGCCCTT...TTGTTGGATGTGAGTGTAGCGTTTGTAAACTTTTGAAAGTAGGGCTAGAACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR TCA 90 bp | AGAGTTCTAGCCCTACTTTCAAAAGTTTACAAACGCTACACTCACATCCAACAAGTCTCTGGTGTCTGGTaGAGGCCCACCTTCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RVLALLSKVYKRYTHIQQVSGVW*RPTFLF Trigger: GAACAAGAAGGTGGGCCTTCACCAGACACCAGAGAC...TTGTTGGATGTGAGTGTAGCGTTTGTAAACTTTTGAAAGTAGGGCTAGAACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR GCA 90 bp | TACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTTCTGAAATGGCCTGCTaGTTATTCTGTTGTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YSSGGWGVQDEDASRFWSSEMAC*LFCCAS Trigger: TGAAGCACAACAGAATAAGCAGCAGGCCATTTCAGA...AGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CCA 90 bp | AGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTCTGAATTCTTCTTACTTGTaGTGCCTGTGGCTGCTATTA | + |
|
Preference number: 4 (lower is better) Translates to: SSGGWGVQDEDASRFWSLNSSYL*CLWLLL Trigger: TAATAGCAGCCACAGGCACCACAAGTAAGAAGAATT...CAGAGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CCA 90 bp | TACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTTTGGAGTATCACTTGTaGGAAAAAGGTCATCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: YSSGGWGVQDEDASRFWSLEYHL*EKGHLG Trigger: GCCAAGATGACCTTTTTCCCACAAGTGATACTCCAA...AGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAATTTATTTCTTACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCCATCCTGCTTCAAACTaGCTTGAGGTTGCAGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: QKFISYSSGGWGVQDEDAHPASN*LEVAGM Trigger: CATCCCTGCAACCTCAAGCCAGTTTGAAGCAGGATG...GGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTAAGAAATAAATTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR TCA 90 bp | TACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTGATTGCTTTATTTGCTaGAGTCATTATGGTCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: YSSGGWGVQDEDASRFWSDCFIC*SHYGLT Trigger: GGTCAGACCATAATGACTTCAGCAAATAAAGCAATC...AGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR TCA 90 bp | TACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTAACAAGAGCCTTTTGTaGATCTACATGAATCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: YSSGGWGVQDEDASRFWSNKSLL*IYMNPI Trigger: GATGGGATTCATGTAGATTCACAAAAGGCTCTTGTT...AGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR TCA 90 bp | GTGCAAACGTCTGTGCTAGGTACTATGCAGAGTACAGGGATGAGCAGAGTTCTACACCGTATCTTTTCTTaGGTTCTTCGACAGAACTAT | + |
|
Preference number: 4 (lower is better) Translates to: VQTSVLGTMQSTGMSRVLHRIFS*VLRQNY Trigger: ATAGTTCTGTCGAAGAACTCAAGAAAAGATACGGTG...TAGAACTCTGCTCATCCCTGTACTCTGCATAGTACCTAGCACAGACGTTTGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR GCA 90 bp | GTGCAAACGTCTGTGCTAGGTACTATGCAGAGTACAGGGATGAGCAGAGTTCTATGTTGTGCTTCAATTTaGTTTCGCTCTCCTTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VQTSVLGTMQSTGMSRVLCCASI*FRSPSV Trigger: AACAGAAGGAGAGCGAAAGCAAATTGAAGCACAACA...TAGAACTCTGCTCATCCCTGTACTCTGCATAGTACCTAGCACAGACGTTTGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR GCA 90 bp | GTGCAAACGTCTGTGCTAGGTACTATGCAGAGTACAGGGATGAGCAGAGTTCTAAACTGGTTTTACCAGTaGTTACACCATGCCCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VQTSVLGTMQSTGMSRVLNWFYQ*LHHAQK Trigger: TTTTTGGGCATGGTGTAAGCACTGGTAAAACCAGTT...TAGAACTCTGCTCATCCCTGTACTCTGCATAGTACCTAGCACAGACGTTTGCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAATTTATTTCTTACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCTTGCTGAAGTCATTATaGTCTGACCAGGCCGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: QKFISYSSGGWGVQDEDALLKSL*SDQAVT Trigger: GGTTACGGCCTGGTCAGACCATAATGACTTCAGCAA...GGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTAAGAAATAAATTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CCA 90 bp | TACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTGCGGTGGATTATCAATaGGTTTTACCACATTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: YSSGGWGVQDEDASRFWSAVDYQ*VLPHFV Trigger: GACAAAATGTGGTAAAACCCATTGATAATCCACCGC...AGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CCA 90 bp | TACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTAAATCAGATTCGAGCTaGAACGAGTTTGCAGGAATT | + |
|
Preference number: 4 (lower is better) Translates to: YSSGGWGVQDEDASRFWSKSDSS*NEFAGI Trigger: AATTCCTGCAAACTCGTTCCAGCTCGAATCTGATTT...AGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR TCA 90 bp | CAGAAATTTATTTCTTACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCTTGAGGTTGCAGGGATaGAGTATCACTGACTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QKFISYSSGGWGVQDEDALRLQG*SITDFF Trigger: GAAGAAGTCAGTGATACTTCATCCCTGCAACCTCAA...GGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTAAGAAATAAATTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR TCA 90 bp | GTGCAAACGTCTGTGCTAGGTACTATGCAGAGTACAGGGATGAGCAGAGTTCTAAACTTTTCAATTGTCTaGAATCAGATTCGAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VQTSVLGTMQSTGMSRVLNFSIV*NQIRAG Trigger: TCCAGCTCGAATCTGATTTCAGACAATTGAAAAGTT...TAGAACTCTGCTCATCCCTGTACTCTGCATAGTACCTAGCACAGACGTTTGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR GCA 90 bp | CAGAAATTTATTTCTTACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCATGGATCGGCATCCATaGCTTTTGTGTAGCAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: QKFISYSSGGWGVQDEDAMDRHP*LLCSSQ Trigger: TTGACTGCTACACAAAAGGCATGGATGCCGATCCAT...GGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTAAGAAATAAATTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR GCA 90 bp | AGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTCTGAGTATAGCATTCAATTaGTCTTTCATATTTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSGGWGVQDEDASRFWSLSIAFN*SFIFPL Trigger: GAGGGGAAATATGAAAGAGCAATTGAATGCTATACT...CAGAGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAATTTATTTCTTACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCGAGCAGCACCTCGTCTaGAATAAGCCTTTGTATAAC | + |
|
Preference number: 4 (lower is better) Translates to: QKFISYSSGGWGVQDEDAEQHLV*NKPLYN Trigger: GTTATACAAAGGCTTATTCCAGACGAGGTGCTGCTC...GGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTAAGAAATAAATTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CCA 90 bp | TACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTCAATACTTTTGCTCTTaGAGTATCACTTGTGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: YSSGGWGVQDEDASRFWSQYFCS*SITCGK Trigger: TTTCCCACAAGTGATACTCCAAGAGCAAAAGTATTG...AGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CCA 90 bp | TACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTTTTGTTCTATCTCTATaGGCATTTTCTCGCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: YSSGGWGVQDEDASRFWSFVLSL*AFSRCK Trigger: CTTACAGCGAGAAAATGCCCATAGAGATAGAACAAA...AGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR TCA 90 bp | AGAGTTCTAGCCCTACTTTCAAAAGTTTACAAACGCTACACTCACATCCAACAATCCGACTCTGATTCTTaGGACAGAGACTCATGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RVLALLSKVYKRYTHIQQSDSDS*DRDSWV Trigger: TACCCATGAGTCTCTGTCTCAAGAATCAGAGTCGGA...TTGTTGGATGTGAGTGTAGCGTTTGTAAACTTTTGAAAGTAGGGCTAGAACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR GCA 90 bp | AGAGTTCTAGCCCTACTTTCAAAAGTTTACAAACGCTACACTCACATCCAACAAGGCATTAGCACCATCTaGTGCTATCCCTCGAGTATA | + |
|
Preference number: 4 (lower is better) Translates to: RVLALLSKVYKRYTHIQQGISTI*CYPSSI Trigger: TATACTCGAGGGATAGCAGCAGATGGTGCTAATGCC...TTGTTGGATGTGAGTGTAGCGTTTGTAAACTTTTGAAAGTAGGGCTAGAACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR GCA 90 bp | TACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTATAAAATGGCTTGTGTaGAGTCTTTTTCAGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YSSGGWGVQDEDASRFWSIKWLV*SLFQLL Trigger: AAGAAGCTGAAAAAGACTGCACACAAGCCATTTTAT...AGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR GCA 90 bp | CAGAAATTTATTTCTTACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCTTAGTTGATCCAGGATaGGGTGGATTATCAATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QKFISYSSGGWGVQDEDALVDPG*GGLSMG Trigger: ACCCATTGATAATCCACCGCATCCTGGATCAACTAA...GGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTAAGAAATAAATTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CCA 90 bp | GTGCAAACGTCTGTGCTAGGTACTATGCAGAGTACAGGGATGAGCAGAGTTCTAAGCCATCTAATAAAATaGCTTGTGTGCAGTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: VQTSVLGTMQSTGMSRVLSHLIK*LVCSLF Trigger: AAAAAGACTGCACACAAGCCATTTTATTAGATGGCT...TAGAACTCTGCTCATCCCTGTACTCTGCATAGTACCTAGCACAGACGTTTGCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CCA 90 bp | GTGCAAACGTCTGTGCTAGGTACTATGCAGAGTACAGGGATGAGCAGAGTTCTACTGGTTGAATACATCTaGATCCAGATTTTTCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VQTSVLGTMQSTGMSRVLLVEYI*IQIFLK Trigger: TTTCAGAAAAATCTGGATCCAGATGTATTCAACCAG...TAGAACTCTGCTCATCCCTGTACTCTGCATAGTACCTAGCACAGACGTTTGCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CCA 90 bp | TACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTAGAATTTTAACGATCTaGTTGAATACATCTGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: YSSGGWGVQDEDASRFWSRILTI*LNTSGS Trigger: GGATCCAGATGTATTCAACCAGATCGTTAAAATTCT...AGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CCA 90 bp | GTGCAAACGTCTGTGCTAGGTACTATGCAGAGTACAGGGATGAGCAGAGTTCTAGTCTCTAAAATTAACTaGTTTTACCAGTGCTTACAC | + |
|
Preference number: 4 (lower is better) Translates to: VQTSVLGTMQSTGMSRVLVSKIN*FYQCLH Trigger: GTGTAAGCACTGGTAAAACCAGTTAATTTTAGAGAC...TAGAACTCTGCTCATCCCTGTACTCTGCATAGTACCTAGCACAGACGTTTGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAATTTATTTCTTACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCTATTTCTTACAGTTCTaGAGGATGGGGAGTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QKFISYSSGGWGVQDEDAYFLQF*RMGSPR Trigger: TCTTGGACTCCCCATCCTCCAGAACTGTAAGAAATA...GGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTAAGAAATAAATTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CCA 90 bp | TACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTCGTTCTGAACTGTTTTaGCCAATTTTTAGCTCTATA | + |
|
Preference number: 4 (lower is better) Translates to: YSSGGWGVQDEDASRFWSRSELF*PIFSSI Trigger: TATAGAGCTAAAAATTGGCCAAAACAGTTCAGAACG...AGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CCA 90 bp | AGAGTTCTAGCCCTACTTTCAAAAGTTTACAAACGCTACACTCACATCCAACAAGGCCCTAAAGCCAGATaGAGCCAGAATTCAAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: RVLALLSKVYKRYTHIQQGPKAR*SQNSNS Trigger: TGAGTTTGAATTCTGGCTCCATCTGGCTTTAGGGCC...TTGTTGGATGTGAGTGTAGCGTTTGTAAACTTTTGAAAGTAGGGCTAGAACTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR TCA 90 bp | AGAGTTCTAGCCCTACTTTCAAAAGTTTACAAACGCTACACTCACATCCAACAAATCTTCTTCCGACTCTaGTTCTTGAGACAGAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: RVLALLSKVYKRYTHIQQIFFRL*FLRQRL Trigger: GAGTCTCTGTCTCAAGAATCAGAGTCGGAAGAAGAT...TTGTTGGATGTGAGTGTAGCGTTTGTAAACTTTTGAAAGTAGGGCTAGAACTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR TCA 90 bp | CAGAAATTTATTTCTTACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAATAAGGCAACAATATaGCAGCCCCTAAAGACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QKFISYSSGGWGVQDEDANKATI*QPLKTV Trigger: AACAGTCTTTAGGGGCTGTCATATTGTTGCCTTATT...GGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTAAGAAATAAATTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR GCA 90 bp | CAGAAATTTATTTCTTACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCCTGCTTATTCTGTTGTaGTTCAATTTGCTTTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QKFISYSSGGWGVQDEDALLILL*FNLLSL Trigger: GAGCGAAAGCAAATTGAAGCACAACAGAATAAGCAG...GGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTAAGAAATAAATTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CCA 90 bp | AGAGTTCTAGCCCTACTTTCAAAAGTTTACAAACGCTACACTCACATCCAACAACAACACGGGATTATATaGATCGGCATCCATGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RVLALLSKVYKRYTHIQQQHGII*IGIHAF Trigger: AAAGGCATGGATGCCGATCCATATAATCCCGTGTTG...TTGTTGGATGTGAGTGTAGCGTTTGTAAACTTTTGAAAGTAGGGCTAGAACTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAATTTATTTCTTACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCGATCTTTCTCTGAAATaGCCTGCTGCTTATTCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: QKFISYSSGGWGVQDEDADLSLK*PAAYSV Trigger: AACAGAATAAGCAGCAGGCCATTTCAGAGAAAGATC...GGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTAAGAAATAAATTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAATTTATTTCTTACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGCAGTAGTGCTATCTaGCACATCAATAGTCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: QKFISYSSGGWGVQDEDASSSAI*HINSLY Trigger: ATACAGACTATTGATGTGCCAGATAGCACTACTGCT...GGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTAAGAAATAAATTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR TCA 90 bp | AGAGTTCTAGCCCTACTTTCAAAAGTTTACAAACGCTACACTCACATCCAACAATTTTGTGAATCTACATaGATCCCATCTTCTTCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: RVLALLSKVYKRYTHIQQFCEST*IPSSSD Trigger: GTCGGAAGAAGATGGGATTCATGTAGATTCACAAAA...TTGTTGGATGTGAGTGTAGCGTTTGTAAACTTTTGAAAGTAGGGCTAGAACTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR TCA 90 bp | AGAGTTCTAGCCCTACTTTCAAAAGTTTACAAACGCTACACTCACATCCAACAACCTGACTTGTCTATGTaGTTAAATAATGCACGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RVLALLSKVYKRYTHIQQPDLSM*LNNARA Trigger: TGCACGTGCATTATTTAATCACATAGACAAGTCAGG...TTGTTGGATGTGAGTGTAGCGTTTGTAAACTTTTGAAAGTAGGGCTAGAACTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR GCA 90 bp | AGAGTTCTAGCCCTACTTTCAAAAGTTTACAAACGCTACACTCACATCCAACAAGTCCACATCAAGTTTTaGCCATGCCTCATAATCATA | + |
|
Preference number: 4 (lower is better) Translates to: RVLALLSKVYKRYTHIQQVHIKF*PCLIII Trigger: TATGATTATGAGGCATGGGCAAAACTTGATGTGGAC...TTGTTGGATGTGAGTGTAGCGTTTGTAAACTTTTGAAAGTAGGGCTAGAACTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CCA 90 bp | CAGAAATTTATTTCTTACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCGGAAAAAGGTCATCTTaGCTTGAATTCTTCTTACTT | + |
|
Preference number: 4 (lower is better) Translates to: QKFISYSSGGWGVQDEDAGKRSS*LEFFLL Trigger: AAGTAAGAAGAATTCAAGCCAAGATGACCTTTTTCC...GGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTAAGAAATAAATTTCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CAA 90 bp | AGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTCTGCTGACGCTCTGTTCGTaGGCAACACGGGATTATATG | + |
|
Preference number: 5 (lower is better) Translates to: SSGGWGVQDEDASRFWSLLTLCS*ATRDYM Trigger: CATATAATCCCGTGTTGCCAACGAACAGAGCGTCAG...CAGAGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CAA 90 bp | TACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTCGAGCTGGAACGAGTTaGCAGGAATTGGAGGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: YSSGGWGVQDEDASRFWSRAGTS*QELEEE Trigger: TTCTTCCTCCAATTCCTGCAAACTCGTTCCAGCTCG...AGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CAA 90 bp | AGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTCTGCTGTTGTGCTTCAATTaGCTTTCGCTCTCCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SSGGWGVQDEDASRFWSLLLCFN*LSLSFC Trigger: ACAGAAGGAGAGCGAAAGCAAATTGAAGCACAACAG...CAGAGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CAA 90 bp | AGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTCTGGAGTTCAGTTACTGCTaGCTTATTTCCAGGTTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSGGWGVQDEDASRFWSLEFSYC*LISRFQ Trigger: CTGGAACCTGGAAATAAGCAAGCAGTAACTGAACTC...CAGAGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS GCA 90 bp | GGCCATAGCTCTGTTAGCTGGAAGAAGGGCATTAGCACCATCTGCTaGTATCCCTCGAGTATAGCATTCAATTGCTCTTTCATATTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GHSSVSWKKGISTIC*YPSSIAFNCSFIFP Trigger: GGGAAATATGAAAGAGCAATTGAATGCTATACTCGAGGGATAGCAGCAGATGGTGCTAATGCCCTTCTTCCAGCTAACAGAGCTATGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 |
||
| CDS-3UTR CAA 90 bp | TACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTGGTCCACATCAAGTTTaGCCCATGCCTCATAATCAT | + |
|
Preference number: 5 (lower is better) Translates to: YSSGGWGVQDEDASRFWSGPHQV*PMPHNH Trigger: ATGATTATGAGGCATGGGCAAAACTTGATGTGGACC...AGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS TCA 90 bp | TTCAAGCCATTCTCGTGCCTCAGCCTCCCAGAATGTTCTGTATCTTaGTCCAAACAGTGGTTTCACAGGTGTACACACATCAAGTTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: FKPFSCLSLPECSVS*SKQWFHRCTHIKFC Trigger: GCAAAACTTGATGTGTGTACACCTGTGAAACCACTGTTTGGATCAAGATACAGAACATTCTGGGAGGCTGAGGCACGAGAATGGCTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547706.1 |
||
| CDS-3UTR CAA 90 bp | TACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTTGGGTACTATCGTCTTaGTCAAGCTCATCAAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: YSSGGWGVQDEDASRFWSWVLSS*SSSSRI Trigger: TATCCTTGATGAGCTTGACAAAGACGATAGTACCCA...AGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CAA 90 bp | AGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTCTGCTATGTCAGCTTCCTTaGGATATGAGTTTTCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSGGWGVQDEDASRFWSLLCQLP*DMSFLW Trigger: CCAAAGAAAACTCATATCCAAAGGAAGCTGACATAG...CAGAGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CAA 90 bp | GTGCAAACGTCTGTGCTAGGTACTATGCAGAGTACAGGGATGAGCAGAGTTCTATTCCCAAAAATGTTCTaGCAGTTCCTCTTCTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: VQTSVLGTMQSTGMSRVLFPKMF*QFLFWQ Trigger: TTGCCAGAAGAGGAACTGCAAGAACATTTTTGGGAA...TAGAACTCTGCTCATCCCTGTACTCTGCATAGTACCTAGCACAGACGTTTGCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CAA 90 bp | AGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTCTGTCAATACTTTTGCTCTaGGAGTATCACTTGTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SSGGWGVQDEDASRFWSLSILLL*EYHLWE Trigger: TTCCCACAAGTGATACTCCAAGAGCAAAAGTATTGA...CAGAGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS TCA 90 bp | CACACACGTCACAGAAAGTCCTTACTTTTTCAGTCTAAAATATGCTaGCGCTCTGTTCGTTGGCAACACGGGATTATATGGATCGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: HTRHRKSLLFQSKIC*RSVRWQHGIIWIGI Trigger: GATGCCGATCCATATAATCCCGTGTTGCCAACGAACAGAGCGTCAGCATATTTTAGACTGAAAAAGTAAGGACTTTCTGTGACGTGTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000548296.1 |
||
| CDS-3UTR CAA 90 bp | CAGAAATTTATTTCTTACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCCGGCATCCATGCCTTTaGTGTAGCAGTCAATTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: QKFISYSSGGWGVQDEDARHPCL*CSSQLL Trigger: AAGCAATTGACTGCTACACAAAAGGCATGGATGCCG...GGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTAAGAAATAAATTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CAA 90 bp | AGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCAGTAGATTCTGGTCTCTGTACCACATTTTGTCTTaGTGTGGAATCAAGAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SSGGWGVQDEDASRFWSLYHILS*CGIKKD Trigger: GTCTTTCTTGATTCCACACAAAGACAAAATGTGGTA...CAGAGACCAGAATCTACTGGCATCTTCATCTTGGACTCCCCATCCTCCAGAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CAA 90 bp | GTGCAAACGTCTGTGCTAGGTACTATGCAGAGTACAGGGATGAGCAGAGTTCTAGGGTTTTACCACATTTaGTCTTTGTGTGGAATCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VQTSVLGTMQSTGMSRVLGFYHI*SLCGIK Trigger: CTTGATTCCACACAAAGACAAAATGTGGTAAAACCC...TAGAACTCTGCTCATCCCTGTACTCTGCATAGTACCTAGCACAGACGTTTGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CAA 90 bp | CAGAAATTTATTTCTTACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCTTGGAGGAAGAACAGTaGTGGCAAACTGAGCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: QKFISYSSGGWGVQDEDALEEEQ*WQTEQV Trigger: AACCTGCTCAGTTTGCCACAACTGTTCTTCCTCCAA...GGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTAAGAAATAAATTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CAA 90 bp | CAGAAATTTATTTCTTACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCACGAGTTTGCAGGAATaGGAGGAAGAACAGTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QKFISYSSGGWGVQDEDATSLQE*EEEQLW Trigger: CCACAACTGTTCTTCCTCCAATTCCTGCAAACTCGT...GGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTAAGAAATAAATTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS GCA 90 bp | ACGCTCTGTTCGTTGGCAACACGGGATTATATGGATCGGCATCCATaGCTTTTGTGTAGCAGTCAATTGCTTCATCATATTTTCCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: TLCSLATRDYMDRHP*LLCSSQLLHHIFLV Trigger: AACAAGGAAAATATGATGAAGCAATTGACTGCTACACAAAAGGCATGGATGCCGATCCATATAATCCCGTGTTGCCAACGAACAGAGCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 ENST00000548296.1 |
||
| CDS GCA 90 bp | ATAGGCCATAGCTCTGTTAGCTGGAAGAAGGGCATTAGCACCATCTaGTGCTATCCCTCGAGTATAGCATTCAATTGCTCTTTCATATTT | + |
|
Preference number: 5 (lower is better) Translates to: IGHSSVSWKKGISTI*CYPSSIAFNCSFIF Trigger: AAATATGAAAGAGCAATTGAATGCTATACTCGAGGGATAGCAGCAGATGGTGCTAATGCCCTTCTTCCAGCTAACAGAGCTATGGCCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 |
||
| CDS CCA 90 bp | TTCTTCATATTTCTGAATCTTCAGATAGGCCATAGCTCTGTTAGCTaGAAGAAGGGCATTAGCACCATCTGCTGCTATCCCTCGAGTATA | + |
|
Preference number: 5 (lower is better) Translates to: FFIFLNLQIGHSSVS*KKGISTICCYPSSI Trigger: TATACTCGAGGGATAGCAGCAGATGGTGCTAATGCCCTTCTTCCAGCTAACAGAGCTATGGCCTATCTGAAGATTCAGAAATATGAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 |
||
| CDS CCA 90 bp | ATTCGAGCTGGAACGAGTTTGCAGGAATTGGAGGAAGAACAGTTGTaGCAAACTGAGCAGGTTTTTGTTCTATCTCTATGGGCATTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: IRAGTSLQELEEEQL*QTEQVFVLSLWAFS Trigger: AGAAAATGCCCATAGAGATAGAACAAAAACCTGCTCAGTTTGCCACAACTGTTCTTCCTCCAATTCCTGCAAACTCGTTCCAGCTCGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 |
||
| CDS-3UTR CAA 90 bp | GTGCAAACGTCTGTGCTAGGTACTATGCAGAGTACAGGGATGAGCAGAGTTCTATGGAGAACTTTTCAATaGTCTGAAATCAGATTCGAG | + |
|
Preference number: 5 (lower is better) Translates to: VQTSVLGTMQSTGMSRVLWRTFQ*SEIRFE Trigger: CTCGAATCTGATTTCAGACAATTGAAAAGTTCTCCA...TAGAACTCTGCTCATCCCTGTACTCTGCATAGTACCTAGCACAGACGTTTGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS TCA 90 bp | TTTTGCTCTTGGAGTATCACTTGTGGGAAAAAGGTCATCTTGGCTTaGATTCTTCTTACTTGTGGTGCCTGTGGCTGCTATTACATTTGC | + |
|
Preference number: 5 (lower is better) Translates to: FCSWSITCGKKVILA*ILLTCGACGCYYIC Trigger: GCAAATGTAATAGCAGCCACAGGCACCACAAGTAAGAAGAATTCAAGCCAAGATGACCTTTTTCCCACAAGTGATACTCCAAGAGCAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 |
||
| CDS GCA 90 bp | TCTTTCTCTGAAATGGCCTGCTGCTTATTCTGTTGTGCTTCAATTTaGTTTCGCTCTCCTTCTGTTGACTTAATCACTATGTCAGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SFSEMACCLFCCASI*FRSPSVDLITMSAS Trigger: GGAAGCTGACATAGTGATTAAGTCAACAGAAGGAGAGCGAAAGCAAATTGAAGCACAACAGAATAAGCAGCAGGCCATTTCAGAGAAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 |
||
| CDS GCA 90 bp | AGAACTTTTCAATTGTCTGAAATCAGATTCGAGCTGGAACGAGTTTaGAGGAATTGGAGGAAGAACAGTTGTGGCAAACTGAGCAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RTFQLSEIRFELERV*RNWRKNSCGKLSRF Trigger: AAACCTGCTCAGTTTGCCACAACTGTTCTTCCTCCAATTCCTGCAAACTCGTTCCAGCTCGAATCTGATTTCAGACAATTGAAAAGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 |
||
| CDS CCA 90 bp | GAAGAACAGTTGTGGCAAACTGAGCAGGTTTTTGTTCTATCTCTATaGGCATTTTCTCGCTGTAAGACTGACATACATCCTGCTTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: EEQLWQTEQVFVLSL*AFSRCKTDIHPASN Trigger: GTTTGAAGCAGGATGTATGTCAGTCTTACAGCGAGAAAATGCCCATAGAGATAGAACAAAAACCTGCTCAGTTTGCCACAACTGTTCTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 |
||
| CDS-3UTR CAA 90 bp | CAGAAATTTATTTCTTACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCCTGCTGCTTATTCTGTaGTGCTTCAATTTGCTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: QKFISYSSGGWGVQDEDALLLIL*CFNLLS Trigger: CGAAAGCAAATTGAAGCACAACAGAATAAGCAGCAG...GGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTAAGAAATAAATTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CAA 90 bp | CAGAAATTTATTTCTTACAGTTCTGGAGGATGGGGAGTCCAAGATGAAGATGCCCCACCGTATCTTTTCTaGAGTTCTTCGACAGAACTA | + |
|
Preference number: 5 (lower is better) Translates to: QKFISYSSGGWGVQDEDAPPYLF*SSSTEL Trigger: TAGTTCTGTCGAAGAACTCAAGAAAAGATACGGTGG...GGCATCTTCATCTTGGACTCCCCATCCTCCAGAACTGTAAGAAATAAATTTCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS TCA 90 bp | TTGAGTTCTTCGACAGAACTATCCTTCAATCCTGACTTGTCTATGTaGTTAAATAATGCACGTGCAACTGGTTGCATGCCAGAACCATTC | + |
|
Preference number: 5 (lower is better) Translates to: LSSSTELSFNPDLSM*LNNARATGCMPEPF Trigger: GAATGGTTCTGGCATGCAACCAGTTGCACGTGCATTATTTAATCACATAGACAAGTCAGGATTGAAGGATAGTTCTGTCGAAGAACTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548211.1 |
||
| CDS CCA 90 bp | AATACTTTTGCTCTTGGAGTATCACTTGTGGGAAAAAGGTCATCTTaGCTTGAATTCTTCTTACTTGTGGTGCCTGTGGCTGCTATTACA | + |
|
Preference number: 5 (lower is better) Translates to: NTFALGVSLVGKRSS*LEFFLLVVPVAAIT Trigger: TGTAATAGCAGCCACAGGCACCACAAGTAAGAAGAATTCAAGCCAAGATGACCTTTTTCCCACAAGTGATACTCCAAGAGCAAAAGTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 |
||
| CDS CCA 90 bp | AACATATCTGGAGAACTTTTCAATTGTCTGAAATCAGATTCGAGCTaGAACGAGTTTGCAGGAATTGGAGGAAGAACAGTTGTGGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: NISGELFNCLKSDSS*NEFAGIGGRTVVAN Trigger: GTTTGCCACAACTGTTCTTCCTCCAATTCCTGCAAACTCGTTCCAGCTCGAATCTGATTTCAGACAATTGAAAAGTTCTCCAGATATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 |
||
| CDS-3UTR CAA 90 bp | AGAGTTCTAGCCCTACTTTCAAAAGTTTACAAACGCTACACTCACATCCAACAATTGAATTCTTCTTACTaGTGGTGCCTGTGGCTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: RVLALLSKVYKRYTHIQQLNSSY*WCLWLL Trigger: TAGCAGCCACAGGCACCACAAGTAAGAAGAATTCAA...TTGTTGGATGTGAGTGTAGCGTTTGTAAACTTTTGAAAGTAGGGCTAGAACTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS CCA 90 bp | TGGCCTCTTCTAATTTTTGCAAAGCAAATCGAGCAGCACCTCGTCTaGAATAAGCCTTTGTATAACTTCTATTCAAGGCAACTGCTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: WPLLIFAKQIEQHLV*NKPLYNFYSRQLLN Trigger: ATTTAGCAGTTGCCTTGAATAGAAGTTATACAAAGGCTTATTCCAGACGAGGTGCTGCTCGATTTGCTTTGCAAAAATTAGAAGAGGCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 |
||
| CDS-3UTR CAA 90 bp | AGAGTTCTAGCCCTACTTTCAAAAGTTTACAAACGCTACACTCACATCCAACAACTCTTGGAGTATCACTaGTGGGAAAAAGGTCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: RVLALLSKVYKRYTHIQQLLEYH*WEKGHL Trigger: AAGATGACCTTTTTCCCACAAGTGATACTCCAAGAG...TTGTTGGATGTGAGTGTAGCGTTTGTAAACTTTTGAAAGTAGGGCTAGAACTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTTCTAGCCCTACTTTCAAAAGTTTACAAACGCTACACTCACATCCAACAAAAAGGTCATCTTGGCTaGAATTCTTCTTACTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RVLALLSKVYKRYTHIQQKGHLG*NSSYLW Trigger: CCACAAGTAAGAAGAATTCAAGCCAAGATGACCTTT...TTGTTGGATGTGAGTGTAGCGTTTGTAAACTTTTGAAAGTAGGGCTAGAACTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTTCTAGCCCTACTTTCAAAAGTTTACAAACGCTACACTCACATCCAACAAACCATGCCCAAAAATTaGCTAGGCTGCTACTTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: RVLALLSKVYKRYTHIQQTMPKN*LGCYFK Trigger: TTTAAAGTAGCAGCCTAGCAAATTTTTGGGCATGGT...TTGTTGGATGTGAGTGTAGCGTTTGTAAACTTTTGAAAGTAGGGCTAGAACTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS CCA 90 bp | GATGCGGTGGATTATCAATGGGTTTTACCACATTTTGTCTTTGTGTaGAATCAAGAAAGACATCATCCCAGTGTCCTTTCTCAATTAATT | + |
|
Preference number: 5 (lower is better) Translates to: DAVDYQWVLPHFVFV*NQERHHPSVLSQLI Trigger: AATTAATTGAGAAAGGACACTGGGATGATGTCTTTCTTGATTCCACACAAAGACAAAATGTGGTAAAACCCATTGATAATCCACCGCATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000005386.8 ENST00000432584.7 |
||
| CDS-3UTR CAA 90 bp | AGAGTTCTAGCCCTACTTTCAAAAGTTTACAAACGCTACACTCACATCCAACAAATTTTAACGATCTGGTaGAATACATCTGGATCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: RVLALLSKVYKRYTHIQQILTIW*NTSGSR Trigger: TCTGGATCCAGATGTATTCAACCAGATCGTTAAAAT...TTGTTGGATGTGAGTGTAGCGTTTGTAAACTTTTGAAAGTAGGGCTAGAACTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000005386.8 |
||
| CDS GCA 72 bp | AGCTCTGTTAGCTGGAAGAAGGGCATTAGCACCATCTaGTGCTATCCCTCGAGTATAGCATTCAATTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SSVSWKKGISTI*CYPSSIAFNCS Trigger: AGAGCAATTGAATGCTATACTCGAGGGATAGCAGCAGATGGTGCTAATGCCCTTCTTCCAGCTAACAGAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 |
||
| CDS CCA 72 bp | TTTCTGAATCTTCAGATAGGCCATAGCTCTGTTAGCTaGAAGAAGGGCATTAGCACCATCTGCTGCTATCCC | + |
|
Preference number: 6 (lower is better) Translates to: FLNLQIGHSSVS*KKGISTICCYP Trigger: GGGATAGCAGCAGATGGTGCTAATGCCCTTCTTCCAGCTAACAGAGCTATGGCCTATCTGAAGATTCAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 |
||
| CDS CAA 90 bp | GTTCAAGCCATTCTCGTGCCTCAGCCTCCCAGAATGTTCTGTATCTaGATCCAAACAGTGGTTTCACAGGTGTACACACATCAAGTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: VQAILVPQPPRMFCI*IQTVVSQVYTHQVL Trigger: CAAAACTTGATGTGTGTACACCTGTGAAACCACTGTTTGGATCAAGATACAGAACATTCTGGGAGGCTGAGGCACGAGAATGGCTTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547706.1 |
||
| CDS GCA 72 bp | TCTGTTAGCTGGAAGAAGGGCATTAGCACCATCTGCTaGTATCCCTCGAGTATAGCATTCAATTGCTCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SVSWKKGISTIC*YPSSIAFNCSF Trigger: GAAAGAGCAATTGAATGCTATACTCGAGGGATAGCAGCAGATGGTGCTAATGCCCTTCTTCCAGCTAACAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 |
||
| CDS GCA 72 bp | ACAGTACTATTGGTCAGCCAGTCTGAAGAGCCCACCTaGATTCTCGGATACCTTGAACTTATCACATTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: TVLLVSQSEEPT*ILGYLELITLE Trigger: CTCTAATGTGATAAGTTCAAGGTATCCGAGAATGCAGGTGGGCTCTTCAGACTGGCTGACCAATAGTACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548211.1 |
||
| CDS CCA 72 bp | GCTCTTGGAGTATCACTTGTGGGAAAAAGGTCATCTTaGCTTGAATTCTTCTTACTTGTGGTGCCTGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: ALGVSLVGKRSS*LEFFLLVVPVA Trigger: AGCCACAGGCACCACAAGTAAGAAGAATTCAAGCCAAGATGACCTTTTTCCCACAAGTGATACTCCAAGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 |
||
| CDS CAA 72 bp | ATTCTCGTGCCTCAGCCTCCCAGAATGTTCTGTATCTaGATCCAAACAGTGGTTTCACAGGTGTACACACAT | + |
|
Preference number: 6 (lower is better) Translates to: ILVPQPPRMFCI*IQTVVSQVYTH Trigger: ATGTGTGTACACCTGTGAAACCACTGTTTGGATCAAGATACAGAACATTCTGGGAGGCTGAGGCACGAGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000547706.1 |
||
| CDS CAA 90 bp | CAGATTCGAGCTGGAACGAGTTTGCAGGAATTGGAGGAAGAACAGTaGTGGCAAACTGAGCAGGTTTTTGTTCTATCTCTATGGGCATTT | + |
|
Preference number: 6 (lower is better) Translates to: QIRAGTSLQELEEEQ*WQTEQVFVLSLWAF Trigger: AAATGCCCATAGAGATAGAACAAAAACCTGCTCAGTTTGCCACAACTGTTCTTCCTCCAATTCCTGCAAACTCGTTCCAGCTCGAATCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 |
||
| CDS GCA 72 bp | AATCCATTCCCCCGATCTTTCTCTGAAATGGCCTGCTaGTTATTCTGTTGTGCTTCAATTTGCTTTCGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: NPFPRSFSEMAC*LFCCASICFRS Trigger: AGAGCGAAAGCAAATTGAAGCACAACAGAATAAGCAGCAGGCCATTTCAGAGAAAGATCGGGGGAATGGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 |
||
| CDS GCA 72 bp | CAATTGTCTGAAATCAGATTCGAGCTGGAACGAGTTTaGAGGAATTGGAGGAAGAACAGTTGTGGCAAACTG | + |
|
Preference number: 6 (lower is better) Translates to: QLSEIRFELERV*RNWRKNSCGKL Trigger: CAGTTTGCCACAACTGTTCTTCCTCCAATTCCTGCAAACTCGTTCCAGCTCGAATCTGATTTCAGACAATTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 |
||
| CDS CCA 72 bp | GGAACGAGTTTGCAGGAATTGGAGGAAGAACAGTTGTaGCAAACTGAGCAGGTTTTTGTTCTATCTCTATGG | + |
|
Preference number: 6 (lower is better) Translates to: GTSLQELEEEQL*QTEQVFVLSLW Trigger: CCATAGAGATAGAACAAAAACCTGCTCAGTTTGCCACAACTGTTCTTCCTCCAATTCCTGCAAACTCGTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 |
||
| CDS CAA 72 bp | GCTGGAACGAGTTTGCAGGAATTGGAGGAAGAACAGTaGTGGCAAACTGAGCAGGTTTTTGTTCTATCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: AGTSLQELEEEQ*WQTEQVFVLSL Trigger: TAGAGATAGAACAAAAACCTGCTCAGTTTGCCACAACTGTTCTTCCTCCAATTCCTGCAAACTCGTTCCAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 |
||
| CDS GCA 72 bp | TCGTTGGCAACACGGGATTATATGGATCGGCATCCATaGCTTTTGTGTAGCAGTCAATTGCTTCATCATATT | + |
|
Preference number: 6 (lower is better) Translates to: SLATRDYMDRHP*LLCSSQLLHHI Trigger: AATATGATGAAGCAATTGACTGCTACACAAAAGGCATGGATGCCGATCCATATAATCCCGTGTTGCCAACGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 ENST00000548296.1 |
||
| CDS GCA 72 bp | AAAAATCCATTCCCCCGATCTTTCTCTGAAATGGCCTaGTGCTTATTCTGTTGTGCTTCAATTTGCTTTCGC | + |
|
Preference number: 6 (lower is better) Translates to: KNPFPRSFSEMA*CLFCCASICFR Trigger: GCGAAAGCAAATTGAAGCACAACAGAATAAGCAGCAGGCCATTTCAGAGAAAGATCGGGGGAATGGATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 |
||
| CDS TCA 72 bp | TCGACAGAACTATCCTTCAATCCTGACTTGTCTATGTaGTTAAATAATGCACGTGCAACTGGTTGCATGCCA | + |
|
Preference number: 6 (lower is better) Translates to: STELSFNPDLSM*LNNARATGCMP Trigger: TGGCATGCAACCAGTTGCACGTGCATTATTTAATCACATAGACAAGTCAGGATTGAAGGATAGTTCTGTCGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000548211.1 |
||
| CDS TCA 72 bp | CACAGAAAGTCCTTACTTTTTCAGTCTAAAATATGCTaGCGCTCTGTTCGTTGGCAACACGGGATTATATGG | + |
|
Preference number: 6 (lower is better) Translates to: HRKSLLFQSKIC*RSVRWQHGIIW Trigger: CCATATAATCCCGTGTTGCCAACGAACAGAGCGTCAGCATATTTTAGACTGAAAAAGTAAGGACTTTCTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000548296.1 |
||
| CDS GCA 72 bp | GAAATGGCCTGCTGCTTATTCTGTTGTGCTTCAATTTaGTTTCGCTCTCCTTCTGTTGACTTAATCACTATG | + |
|
Preference number: 6 (lower is better) Translates to: EMACCLFCCASI*FRSPSVDLITM Trigger: CATAGTGATTAAGTCAACAGAAGGAGAGCGAAAGCAAATTGAAGCACAACAGAATAAGCAGCAGGCCATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 |
||
| CDS CCA 72 bp | AGGATTATTCTCTGGAGCAGCAGCAGTAGTGCTATCTaGCACATCAATAGTCTGTATCAAATTACCAGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: RIILWSSSSSAI*HINSLYQITSF Trigger: GAAACTGGTAATTTGATACAGACTATTGATGTGCCAGATAGCACTACTGCTGCTGCTCCAGAGAATAATCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 |
||
| CDS CCA 72 bp | TTGTGGCAAACTGAGCAGGTTTTTGTTCTATCTCTATaGGCATTTTCTCGCTGTAAGACTGACATACATCCT | + |
|
Preference number: 6 (lower is better) Translates to: LWQTEQVFVLSL*AFSRCKTDIHP Trigger: AGGATGTATGTCAGTCTTACAGCGAGAAAATGCCCATAGAGATAGAACAAAAACCTGCTCAGTTTGCCACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 |
||
| CDS CAA 72 bp | CGGTGGATTATCAATGGGTTTTACCACATTTTGTCTTaGTGTGGAATCAAGAAAGACATCATCCCAGTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RWIINGFYHILS*CGIKKDIIPVS Trigger: GGACACTGGGATGATGTCTTTCTTGATTCCACACAAAGACAAAATGTGGTAAAACCCATTGATAATCCACCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000005386.8 ENST00000432584.7 |
||
| CDS CAA 72 bp | TGGGAAAAAGGTCATCTTGGCTTGAATTCTTCTTACTaGTGGTGCCTGTGGCTGCTATTACATTTGCTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: WEKGHLGLNSSY*WCLWLLLHLLD Trigger: ATCTAGCAAATGTAATAGCAGCCACAGGCACCACAAGTAAGAAGAATTCAAGCCAAGATGACCTTTTTCCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 |
||
| CDS CAA 90 bp | TCCAGGATGCGGTGGATTATCAATGGGTTTTACCACATTTTGTCTTaGTGTGGAATCAAGAAAGACATCATCCCAGTGTCCTTTCTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: SRMRWIINGFYHILS*CGIKKDIIPVSFLN Trigger: ATTGAGAAAGGACACTGGGATGATGTCTTTCTTGATTCCACACAAAGACAAAATGTGGTAAAACCCATTGATAATCCACCGCATCCTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000005386.8 ENST00000432584.7 |
||
| CDS CAA 72 bp | AAGCAAATCGAGCAGCACCTCGTCTGGAATAAGCCTTaGTATAACTTCTATTCAAGGCAACTGCTAAATTAC | + |
|
Preference number: 6 (lower is better) Translates to: KQIEQHLVWNKP*YNFYSRQLLNY Trigger: GTAATTTAGCAGTTGCCTTGAATAGAAGTTATACAAAGGCTTATTCCAGACGAGGTGCTGCTCGATTTGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 |
||
| CDS CAA 72 bp | TTCAGCAAAAATGGAAATCAACCACCGTATCTTTTCTaGAGTTCTTCGACAGAACTATCCTTCAATCCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: FSKNGNQPPYLF*SSSTELSFNPD Trigger: GTCAGGATTGAAGGATAGTTCTGTCGAAGAACTCAAGAAAAGATACGGTGGTTGATTTCCATTTTTGCTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 ENST00000548211.1 |
||
| CDS CAA 72 bp | CAAACAGTGGTTTCACAGGTGTACACACATCAAGTTTaGCCCATGCCTCATAATCATAAGATTTTATCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: QTVVSQVYTHQV*PMPHNHKILSC Trigger: ACAGGATAAAATCTTATGATTATGAGGCATGGGCAAAACTTGATGTGTGTACACCTGTGAAACCACTGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000547706.1 |
||
| CDS CAA 90 bp | CTTGTAATTCTTCTGCATTTTGTTTCACTTGTAGTTGTAATTCGATaGCTTTATTTGCTGAAGTCATTATGGTCTGACCAGGCCGTAACC | + |
|
Preference number: 6 (lower is better) Translates to: LVILLHFVSLVVVIR*LYLLKSLWSDQAVT Trigger: GGTTACGGCCTGGTCAGACCATAATGACTTCAGCAAATAAAGCAATCGAATTACAACTACAAGTGAAACAAAATGCAGAAGAATTACAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000551293.1 |
||
| CDS CAA 90 bp | ATTTTTGCAAAGCAAATCGAGCAGCACCTCGTCTGGAATAAGCCTTaGTATAACTTCTATTCAAGGCAACTGCTAAATTACAATCAGACT | + |
|
Preference number: 6 (lower is better) Translates to: IFAKQIEQHLVWNKP*YNFYSRQLLNYNQT Trigger: AGTCTGATTGTAATTTAGCAGTTGCCTTGAATAGAAGTTATACAAAGGCTTATTCCAGACGAGGTGCTGCTCGATTTGCTTTGCAAAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 |
||
| CDS GCA 72 bp | AAACAGTGGTTTCACAGGTGTACACACATCAAGTTTTaGCCATGCCTCATAATCATAAGATTTTATCCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: KQWFHRCTHIKF*PCLIIIRFYPV Trigger: AACAGGATAAAATCTTATGATTATGAGGCATGGGCAAAACTTGATGTGTGTACACCTGTGAAACCACTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000547706.1 |
||
| CDS CAA 90 bp | AACAATTATTTCAGCAAAAATGGAAATCAACCACCGTATCTTTTCTaGAGTTCTTCGACAGAACTATCCTTCAATCCTGACTTGTCTATG | + |
|
Preference number: 6 (lower is better) Translates to: NNYFSKNGNQPPYLF*SSSTELSFNPDLSM Trigger: CATAGACAAGTCAGGATTGAAGGATAGTTCTGTCGAAGAACTCAAGAAAAGATACGGTGGTTGATTTCCATTTTTGCTGAAATAATTGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENST00000005386.8 ENST00000380650.4 ENST00000432584.7 ENST00000548211.1 |
||