RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RPAP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000103932

Ensembl transcript IDs: ENST00000304330.9, ENST00000561603.5, ENST00000561631.1, ENST00000562303.5, ENST00000563293.1, ENST00000564934.1, ENST00000565035.1, ENST00000565167.1, ENST00000566863.1, ENST00000567866.5, ENST00000568413.1, ENST00000569829.1

Found 750 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGAACAGGGAGAGGTGGCACTGAGCCGAGGGCTGGTACCCACCACTaGCCTTGCTTGACACTTACCTCTTCCCCAGCTGGCCCAGAGGCA +
Preference number: 1 (lower is better)
Translates to: RTGRGGTEPRAGTHH*PCLTLTSSPAGPEA
Trigger: TGCCTCTGGGCCAGCTGGGGAAGAGGTAAGTGTCAAGCAAGGCCAGTGGTGGGTACCAGCCCTCGGCTCAGTGCCACCTCTCCCTGTTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
3UTR TCA 90 bp CTGCCAGCAGCCATGTTTTCTGCAGCATACTCCTGCGGGCAGCTTTaGCCTCATCCTAGAAGCAGAACAGGGAGAGGTGGCACTGAGCCG +
Preference number: 1 (lower is better)
Translates to: LPAAMFSAAYSCGQL*PHPRSRTGRGGTEP
Trigger: CGGCTCAGTGCCACCTCTCCCTGTTCTGCTTCTAGGATGAGGTCAAAGCTGCCCGCAGGAGTATGCTGCAGAAAACATGGCTGCTGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
3UTR CCA 90 bp GCAGAGGGGGCAACTGAGAATAGAGCTCAAAGCCCTCTGGGAGCGTaGAATTGGGAAGCTTATAGTGCAGGAGGTGCTGCCGGAGACCCT +
Preference number: 1 (lower is better)
Translates to: AEGATENRAQSPLGA*NWEAYSAGGAAGDP
Trigger: AGGGTCTCCGGCAGCACCTCCTGCACTATAAGCTTCCCAATTCCACGCTCCCAGAGGGCTTTGAGCTCTATTCTCAGTTGCCCCCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562303.5
3UTR CCA 90 bp GTGCTGACGCAGAGGGGGCAACTGAGAATAGAGCTCAAAGCCCTCTaGGAGCGTGGAATTGGGAAGCTTATAGTGCAGGAGGTGCTGCCG +
Preference number: 1 (lower is better)
Translates to: VLTQRGQLRIELKAL*ERGIGKLIVQEVLP
Trigger: CGGCAGCACCTCCTGCACTATAAGCTTCCCAATTCCACGCTCCCAGAGGGCTTTGAGCTCTATTCTCAGTTGCCCCCTCTGCGTCAGCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562303.5
3UTR CCA 90 bp TGGTACCCACCACTGGCCTTGCTTGACACTTACCTCTTCCCCAGCTaGCCCAGAGGCAGCTCAATTGCTAGCTCCCTTCCTTCCTCTGAA +
Preference number: 1 (lower is better)
Translates to: WYPPLALLDTYLFPS*PRGSSIASSLPSSE
Trigger: TTCAGAGGAAGGAAGGGAGCTAGCAATTGAGCTGCCTCTGGGCCAGCTGGGGAAGAGGTAAGTGTCAAGCAAGGCCAGTGGTGGGTACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
3UTR CCA 90 bp GGGGCAACTGAGAATAGAGCTCAAAGCCCTCTGGGAGCGTGGAATTaGGAAGCTTATAGTGCAGGAGGTGCTGCCGGAGACCCTCATCTG +
Preference number: 1 (lower is better)
Translates to: GATENRAQSPLGAWN*EAYSAGGAAGDPHL
Trigger: CAGATGAGGGTCTCCGGCAGCACCTCCTGCACTATAAGCTTCCCAATTCCACGCTCCCAGAGGGCTTTGAGCTCTATTCTCAGTTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
3UTR GCA 90 bp GGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTaGTCCCAGGAAGGCAAGCCTTCTGCTCCTTGGTCTCCTGCCTAC +
Preference number: 1 (lower is better)
Translates to: GCNGRAHCSKTAQTT*SQEGKPSAPWSPAY
Trigger: GTAGGCAGGAGACCAAGGAGCAGAAGGCTTGCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
3UTR GCA 90 bp GACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTaGTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCAAGCCT +
Preference number: 1 (lower is better)
Translates to: DLQKPQISGCNGRAH*SKTAQTTCSQEGKP
Trigger: AGGCTTGCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
3UTR CCA 90 bp TTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTaGATACAGGACAACGTACCCATCTTTCCATCTATATCAACTATC +
Preference number: 1 (lower is better)
Translates to: LGHNVLRLARHLLKG*IQDNVPIFPSISTI
Trigger: GATAGTTGATATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
3UTR-3UTR CCA 90 bp GTGCCTGGGTCAATCCCCACTTCTTCCACAAAGCCCAATTTGATCTTTCCCTTCTGGGCTGGGGTGCAGTaGCGCGATCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: VPGSIPTSSTKPNLIFPFWAGVQ*RDLGSL
Trigger: CAGTGAGCCGAGATCGCGCCACTGCACCCCAGCCCA...GAAGGGAAAGATCAAATTGGGCTTTGTGGAAGAAGTGGGGATTGACCCAGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562303.5
3UTR-3UTR GCA 90 bp GAGGTGCTGCCGGAGACCCTCATCTGCCAGCAGCCATGTTTTCTGCAGCATACTACCCACCACTGGCCTTaGTTGACACTTACCTCTTCC +
Preference number: 2 (lower is better)
Translates to: EVLPETLICQQPCFLQHTTHHWP*LTLTSS
Trigger: GGAAGAGGTAAGTGTCAAGCAAGGCCAGTGGTGGGT...AGTATGCTGCAGAAAACATGGCTGCTGGCAGATGAGGGTCTCCGGCAGCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
3UTR-3UTR GCA 90 bp ACGCAGAGGGGGCAACTGAGAATAGAGCTCAAAGCCCTCTGGGAGCGTGGAATTACAGCTCAAACAACCTaGTCCCAGGAAGGCAAGCCT +
Preference number: 2 (lower is better)
Translates to: TQRGQLRIELKALWERGITAQTT*SQEGKP
Trigger: AGGCTTGCCTTCCTGGGAGCAGGTTGTTTGAGCTGT...AATTCCACGCTCCCAGAGGGCTTTGAGCTCTATTCTCAGTTGCCCCCTCTGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562303.5
3UTR CAA 90 bp AACAGCTCAAACAACCTGCTCCCAGGAAGGCAAGCCTTCTGCTCCTaGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCC +
Preference number: 2 (lower is better)
Translates to: NSSNNLLPGRQAFCS*VSCLPLGHNVLRLA
Trigger: GGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCAGAAGGCTTGCCTTCCTGGGAGCAGGTTGTTTGAGCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
3UTR-3UTR GCA 90 bp CCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACGGAAGGCAAGCCTTCTaGTCCTTGGTCTCCTGCCTA +
Preference number: 2 (lower is better)
Translates to: PSTDLQKPQISGCNGRAHGRQAF*SLVSCL
Trigger: TAGGCAGGAGACCAAGGAGCAGAAGGCTTGCCTTCC...GTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
3UTR-3UTR GCA 90 bp TCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGGGAAGGCAAGCCTTCTaGTCCTTGGTCTCCTGCCTA +
Preference number: 2 (lower is better)
Translates to: SLPVQTFRSPRYQDVMVGGRQAF*SLVSCL
Trigger: TAGGCAGGAGACCAAGGAGCAGAAGGCTTGCCTTCC...CCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
3UTR-3UTR GCA 90 bp ACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTACTATAGCATTCATATaGCTCAGCCCAGGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: TDLQKPQISGCNGRAHCSTIAFI*LSPGQG
Trigger: CCCCTGCCCTGGGCTGAGGCATATGAATGCTATAGT...AGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
3UTR-3UTR TCA 90 bp GCTAAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGAACTATCCTAGGTCTCTaGTACCCCATTTTGGAGCAC +
Preference number: 2 (lower is better)
Translates to: AKPLFTPSTDLQKPQISGTILGL*YPILEH
Trigger: GTGCTCCAAAATGGGGTATCAGAGACCTAGGATAGT...TCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000561603.5
ENST00000562303.5
3UTR-3UTR TCA 90 bp CTTCTGCTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCACTATCCTAGGTCTCTaGTACCCCATTTTGGAGCAC +
Preference number: 2 (lower is better)
Translates to: LLLLGLLPTIRTQCSSSGTILGL*YPILEH
Trigger: GTGCTCCAAAATGGGGTATCAGAGACCTAGGATAGT...GCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561603.5
ENST00000562303.5
3UTR-3UTR GCA 90 bp TGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCGGGATGCATTTAGTTTaGCCTGTCCCCAAAGAGCGG +
Preference number: 2 (lower is better)
Translates to: CLPLGHNVLRLARHLLKGGMHLV*PVPKER
Trigger: CCGCTCTTTGGGGACAGGGCAAACTAAATGCATCCC...GCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
3UTR-3UTR GCA 90 bp TGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCACTATAGCATTCATATaGCTCAGCCCAGGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: CLPLGHNVLRLARHLLKGTIAFI*LSPGQG
Trigger: CCCCTGCCCTGGGCTGAGGCATATGAATGCTATAGT...GCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
3UTR-3UTR GCA 90 bp TCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGTGCTCCTTGGTCTCCTaGCTACCATTAGGACACAAT +
Preference number: 2 (lower is better)
Translates to: SLPVQTFRSPRYQDVMVGCSLVS*LPLGHN
Trigger: ATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCA...CCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
3UTR-3UTR GCA 90 bp CCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTTGCTCCTTGGTCTCCTaGCTACCATTAGGACACAAT +
Preference number: 2 (lower is better)
Translates to: PVQTFRSPRYQDVMVGLTCSLVS*LPLGHN
Trigger: ATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCA...AGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
3UTR-3UTR GCA 90 bp GTGGATAACGATCACATGAAACCAAATCATGAGGGCAGAGATCAGGTCCTAGACACTATAGCATTCATATaGCTCAGCCCAGGGCAGGGG +
Preference number: 2 (lower is better)
Translates to: VDNDHMKPNHEGRDQVLDTIAFI*LSPGQG
Trigger: CCCCTGCCCTGGGCTGAGGCATATGAATGCTATAGT...GTCTAGGACCTGATCTCTGCCCTCATGATTTGGTTTCATGTGATCGTTATCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562303.5
3UTR-3UTR CCA 90 bp CTAAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATCATCTGTTGAAAGGCTaGATACAGGACAACGTACCC +
Preference number: 2 (lower is better)
Translates to: LSHSSLPVQTFRSPRYQDHLLKG*IQDNVP
Trigger: GGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATG...ATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
3UTR-3UTR CCA 90 bp CAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCCATCTGTTGAAAGGCTaGATACAGGACAACGTACCC +
Preference number: 2 (lower is better)
Translates to: QDVMVGLTALKQLKQPAPHLLKG*IQDNVP
Trigger: GGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATG...GGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
3UTR-3UTR GCA 90 bp CTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCAATGGTAGGGCTCACTaGTCTAAAACAGCTCAAACA +
Preference number: 2 (lower is better)
Translates to: LPVQTFRSPRYQDVMVGLNGRAH*SKTAQT
Trigger: TGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATT...GAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
3UTR-3UTR GCA 90 bp AGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTACAGCTCAAACAACCTaGTCCCAGGAAGGCAAGCCT +
Preference number: 2 (lower is better)
Translates to: RYQDVMVGLTALKQLKQPTAQTT*SQEGKP
Trigger: AGGCTTGCCTTCCTGGGAGCAGGTTGTTTGAGCTGT...AGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
3UTR CAA 90 bp TGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTaGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATA +
Preference number: 2 (lower is better)
Translates to: CLPLGHNVLRLARHL*KGWIQDNVPIFPSI
Trigger: TATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
3UTR-3UTR GCA 90 bp ACATCTGTCCTTCTAGCACAAGGATCAGGGTTAAAGACTACAGAGCAGATGTTGCTGTTAGGAATCTCCTaGCTTTCTACCTCCTCACCA +
Preference number: 2 (lower is better)
Translates to: TSVLLAQGSGLKTTEQMLLLGIS*LSTSSP
Trigger: TGGTGAGGAGGTAGAAAGGCAGGAGATTCCTAACAG...CAACATCTGCTCTGTAGTCTTTAACCCTGATCCTTGTGCTAGAAGGACAGATGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562303.5
3UTR-3UTR CCA 90 bp ATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCCATCTGTTGAAAGGCTaGATACAGGACAACGTACCC +
Preference number: 2 (lower is better)
Translates to: ISGCNGRAHCSKTAQTTCHLLKG*IQDNVP
Trigger: GGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATG...GCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
3UTR CAA 90 bp AGCCTTAAGTTCCCAACAGAAATCTCTCCTCCCTCCTTCTGCCCTTaGTCATGCTCCTTTTGCTTATGTTATTCTGTTAGGAATCTCCTG +
Preference number: 2 (lower is better)
Translates to: SLKFPTEISPPSFCP*SCSFCLCYSVRNLL
Trigger: CAGGAGATTCCTAACAGAATAACATAAGCAAAAGGAGCATGACAAAGGGCAGAAGGAGGGAGGAGAGATTTCTGTTGGGAACTTAAGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
3UTR-3UTR GCA 90 bp AGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTTGCTCCTTGGTCTCCTaGCTACCATTAGGACACAAT +
Preference number: 2 (lower is better)
Translates to: RYQDVMVGLTALKQLKQPCSLVS*LPLGHN
Trigger: ATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCA...AGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
3UTR GCA 72 bp TGCCGGAGACCCTCATCTGCCAGCAGCCATGTTTTCTaGAGCATACTCCTGCGGGCAGCTTTGACCTCATCC +
Preference number: 3 (lower is better)
Translates to: CRRPSSASSHVF*SILLRAALTSS
Trigger: GGATGAGGTCAAAGCTGCCCGCAGGAGTATGCTGCAGAAAACATGGCTGCTGGCAGATGAGGGTCTCCGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
3UTR CCA 72 bp GAGAATAGAGCTCAAAGCCCTCTGGGAGCGTGGAATTaGGAAGCTTATAGTGCAGGAGGTGCTGCCGGAGAC +
Preference number: 3 (lower is better)
Translates to: ENRAQSPLGAWN*EAYSAGGAAGD
Trigger: GTCTCCGGCAGCACCTCCTGCACTATAAGCTTCCCAATTCCACGCTCCCAGAGGGCTTTGAGCTCTATTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562303.5
3UTR CCA 72 bp CAGAGGGGGCAACTGAGAATAGAGCTCAAAGCCCTCTaGGAGCGTGGAATTGGGAAGCTTATAGTGCAGGAG +
Preference number: 3 (lower is better)
Translates to: QRGQLRIELKAL*ERGIGKLIVQE
Trigger: CTCCTGCACTATAAGCTTCCCAATTCCACGCTCCCAGAGGGCTTTGAGCTCTATTCTCAGTTGCCCCCTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562303.5
3UTR-3UTR CAA 90 bp CCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACCTGGCCAGACATCTGTaGAAAGGCTGGATACAGGAC +
Preference number: 3 (lower is better)
Translates to: PSTDLQKPQISGCNGRAHLARHL*KGWIQD
Trigger: GTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAG...GTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
3UTR GCA 72 bp AAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTaGTCTAAAACAGCTCAAACAACCTGCTCCCAGGAA +
Preference number: 3 (lower is better)
Translates to: KPQISGCNGRAH*SKTAQTTCSQE
Trigger: TTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
3UTR CCA 72 bp AATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTaGATACAGGACAACGTACCCATCTTTCCATCTATA +
Preference number: 3 (lower is better)
Translates to: NVLRLARHLLKG*IQDNVPIFPSI
Trigger: TATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp GCTGAAGGAGGGCCAGGTTGTCTTCAGGAGGCACTGTGTAACACTCCAGGGACAGAGGTGGGTGGGTGCTaGGCTCCCGCGGCACCACCT +
Preference number: 4 (lower is better)
Translates to: AEGGPGCLQEALCNTPGTEVGGC*APAAPP
Trigger: AGGTGGTGCCGCGGGAGCTCAGCACCCACCCACCTC...TGTCCCTGGAGTGTTACACAGTGCCTCCTGAAGACAACCTGGCCCTCCTTCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CCA 90 bp GTGCTGCCGGAGACCCTCATCTGCCAGCAGCCATGTTTTCTGCAGCATACTCCTGGTCACGGCACCCTCTaGTGGGCCCACGTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: VLPETLICQQPCFLQHTPGHGTL*WAHVGH
Trigger: GTGCCCAACGTGGGCCCACCAGAGGGTGCCGTGACC...AGGAGTATGCTGCAGAAAACATGGCTGCTGGCAGATGAGGGTCTCCGGCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CCA 90 bp AACCAGGGTCCGGAAGTAGAGCTGAAGGAGGGCCAGGTTGTCTTCAGGAGGCACGCAGGCAACGGGCACTaGGCCCACGGCTCTCCACAT +
Preference number: 4 (lower is better)
Translates to: NQGPEVELKEGQVVFRRHAGNGH*AHGSPH
Trigger: ATGTGGAGAGCCGTGGGCCCAGTGCCCGTTGCCTGC...GTGCCTCCTGAAGACAACCTGGCCCTCCTTCAGCTCTACTTCCGGACCCTGGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR GCA 90 bp GAGGTGCTGCCGGAGACCCTCATCTGCCAGCAGCCATGTTTTCTGCAGCATACTTGTAGCTCCCCTCGGTaGAGAGCCTGGGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: EVLPETLICQQPCFLQHTCSSPR*RAWEAS
Trigger: GCTGGCCTCCCAGGCTCTGCACCGAGGGGAGCTACA...AGTATGCTGCAGAAAACATGGCTGCTGGCAGATGAGGGTCTCCGGCAGCACCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CCA 90 bp GTGCTGCCGGAGACCCTCATCTGCCAGCAGCCATGTTTTCTGCAGCATACTCCTTGGTGCAGACCCAGGTaGGTGGGCAGGTCCACGTCA +
Preference number: 4 (lower is better)
Translates to: VLPETLICQQPCFLQHTPWCRPR*VGRSTS
Trigger: TGACGTGGACCTGCCCACCCACCTGGGTCTGCACCA...AGGAGTATGCTGCAGAAAACATGGCTGCTGGCAGATGAGGGTCTCCGGCAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CCA 90 bp AACCAGGGTCCGGAAGTAGAGCTGAAGGAGGGCCAGGTTGTCTTCAGGAGGCACTCTGCCTCCTCTCCATaGTGGTGCAGACCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: NQGPEVELKEGQVVFRRHSASSP*WCRPRW
Trigger: CCACCTGGGTCTGCACCACCATGGAGAGGAGGCAGA...GTGCCTCCTGAAGACAACCTGGCCCTCCTTCAGCTCTACTTCCGGACCCTGGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CCA 90 bp GAGCTGAAGGAGGGCCAGGTTGTCTTCAGGAGGCACTGTGTAACACTCCAGGGAACAGCCCAGAGAGCCTaGGGGCGCCAGCTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: ELKEGQVVFRRHCVTLQGTAQRA*GRQLSK
Trigger: TTTGGAGAGCTGGCGCCCCCAGGCTCTCTGGGCTGT...TCCCTGGAGTGTTACACAGTGCCTCCTGAAGACAACCTGGCCCTCCTTCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR TCA 90 bp GCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCAAGCCTTCTGAGCGGAGGCCGGTCTaGGTTGGCATCACCACCGCC +
Preference number: 4 (lower is better)
Translates to: AHCSKTAQTTCSQEGKPSERRPV*VGITTA
Trigger: GGCGGTGGTGATGCCAACTCAGACCGGCCTCCGCTC...AGAAGGCTTGCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp GAGGTGCTGCCGGAGACCCTCATCTGCCAGCAGCCATGTTTTCTGCAGCATACTCCAATCCTCCGGGCATaGGCTTGGTTGCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: EVLPETLICQQPCFLQHTPILRA*AWLLAP
Trigger: TGGAGCCAGCAACCAAGCTCATGCCCGGAGGATTGG...AGTATGCTGCAGAAAACATGGCTGCTGGCAGATGAGGGTCTCCGGCAGCACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR GCA 90 bp GTGCTGCCGGAGACCCTCATCTGCCAGCAGCCATGTTTTCTGCAGCATACTCCTGCGAGTGCCAGGTACTaGAGGTGGTACTCATGGCGC +
Preference number: 4 (lower is better)
Translates to: VLPETLICQQPCFLQHTPASARY*RWYSWR
Trigger: GCGCCATGAGTACCACCTGCAGTACCTGGCACTCGC...AGGAGTATGCTGCAGAAAACATGGCTGCTGGCAGATGAGGGTCTCCGGCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR GCA 90 bp ATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCAGCCCCCGAGGCCCAGTaGAGGGTACCCTTGCAGGTC +
Preference number: 4 (lower is better)
Translates to: MVGLTALKQLKQPAPRKAAPEAQ*RVPLQV
Trigger: GACCTGCAAGGGTACCCTGCACTGGGCCTCGGGGGC...TGCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CCA 90 bp GTGCTGCCGGAGACCCTCATCTGCCAGCAGCCATGTTTTCTGCAGCATACTCCTACAGGCTGCCCAGTGTaGGCTGACTCAGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: VLPETLICQQPCFLQHTPTGCPV*ADSAVA
Trigger: TGCCACTGCTGAGTCAGCCCACACTGGGCAGCCTGT...AGGAGTATGCTGCAGAAAACATGGCTGCTGGCAGATGAGGGTCTCCGGCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR TCA 90 bp TCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCGAGCGGAGGCCGGTCTaGGTTGGCATCACCACCGCC +
Preference number: 4 (lower is better)
Translates to: SGQTSVERLDTGQRTHLSERRPV*VGITTA
Trigger: GGCGGTGGTGATGCCAACTCAGACCGGCCTCCGCTC...GGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp CCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGGGGAGCCTCAGCTATaGTGCGGCACAGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: PVQTFRSPRYQDVMVGLTGEPQL*CGTGGS
Trigger: GGAGCCGCCTGTGCCGCATCATAGCTGAGGCTCCCC...AGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp CTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCCCGAGGGGGTGTCTaGAGCCCGGTGGTAGAGGCG +
Preference number: 4 (lower is better)
Translates to: LARHLLKGWIQDNVPIFPSRGGV*SPVVEA
Trigger: CGCCTCTACCACCGGGCTTCAGACACCCCCTCGGGA...TGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR TCA 90 bp CTAAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATTCCCGAGGGGGTGTCTaGAGCCCGGTGGTAGAGGCG +
Preference number: 4 (lower is better)
Translates to: LSHSSLPVQTFRSPRYQDSRGGV*SPVVEA
Trigger: CGCCTCTACCACCGGGCTTCAGACACCCCCTCGGGA...ATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR GCA 90 bp AGGGGGCAACTGAGAATAGAGCTCAAAGCCCTCTGGGAGCGTGGAATTGGGAAGCTTCACCAACTGCACTaGTGGGGCTGCACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RGQLRIELKALWERGIGKLHQLH*WGCTSC
Trigger: GCAGCTGGTGCAGCCCCAGCAGTGCAGTTGGTGAAG...CTTCCCAATTCCACGCTCCCAGAGGGCTTTGAGCTCTATTCTCAGTTGCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR GCA 90 bp CTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCCTCTCCTGTGTCTGCTaGCGCCGGACAGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: LRLARHLLKGWIQDNVPILSCVC*RRTGGK
Trigger: CTTGCCCCCTGTCCGGCGGCAGCAGACACAGGAGAG...GATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp GCTAAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGAATCCTCTCCTGTGTCTaGTGCCGCCGGACAGGGGGC +
Preference number: 4 (lower is better)
Translates to: AKPLFTPSTDLQKPQISGILSCV*CRRTGG
Trigger: GCCCCCTGTCCGGCGGCAGCAGACACAGGAGAGGAT...TCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTTAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp ACGCAGAGGGGGCAACTGAGAATAGAGCTCAAAGCCCTCTGGGAGCGTGGAATTAGTGCCAGTGCTCTCTaGTGGGAAACCTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: TQRGQLRIELKALWERGISASAL*WETWLR
Trigger: CCGCAGCCAGGTTTCCCAGCAGAGAGCACTGGCACT...AATTCCACGCTCCCAGAGGGCTTTGAGCTCTATTCTCAGTTGCCCCCTCTGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR GCA 90 bp CCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTCCCGCGGCACCACCTaGAAGGCCCGCATCAGCACT +
Preference number: 4 (lower is better)
Translates to: PSTDLQKPQISGCNGRAHSRGTT*KARIST
Trigger: AGTGCTGATGCGGGCCTTGCAGGTGGTGCCGCGGGA...GTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACCTCAAGGCTCAGGACTaGCCCCGAGGCCCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: PSTDLQKPQISGCNGRAHLKAQD*PRGPVQ
Trigger: CTGCACTGGGCCTCGGGGGCAGTCCTGAGCCTTGAG...GTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CCA 90 bp GCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCAAGCCTTCTCACGGCACCCTCTGGTaGGCCCACGTTGGGCACAAC +
Preference number: 4 (lower is better)
Translates to: AHCSKTAQTTCSQEGKPSHGTLW*AHVGHN
Trigger: GTTGTGCCCAACGTGGGCCCACCAGAGGGTGCCGTG...AGAAGGCTTGCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp ACGCAGAGGGGGCAACTGAGAATAGAGCTCAAAGCCCTCTGGGAGCGTGGAATTGGGCAATGCCAGAGCTaGGGCTTCTGGCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: TQRGQLRIELKALWERGIGQCQS*GFWLQL
Trigger: AAGCTGGAGCCAGAAGCCCCAGCTCTGGCATTGCCC...AATTCCACGCTCCCAGAGGGCTTTGAGCTCTATTCTCAGTTGCCCCCTCTGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CCA 90 bp TCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCGCAGACCCAGGTGGGTaGGCAGGTCCACGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: SGQTSVERLDTGQRTHLSADPGG*AGPRQG
Trigger: CCCCTGACGTGGACCTGCCCACCCACCTGGGTCTGC...GGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTGCTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGTGGTGCAGACCCAGGTaGGTGGGCAGGTCCACGTCA +
Preference number: 4 (lower is better)
Translates to: LLLGLLPTIRTQCSSSGQWCRPR*VGRSTS
Trigger: TGACGTGGACCTGCCCACCCACCTGGGTCTGCACCA...CTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTGCTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGGCCTCCTCTCCATGGTaGTGCAGACCCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LLLGLLPTIRTQCSSSGQASSPW*CRPRWV
Trigger: CACCCACCTGGGTCTGCACCACCATGGAGAGGAGGC...CTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTGCTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGGCCAGTGCTCTCTGCTaGGAAACCTGGCTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: LLLGLLPTIRTQCSSSGQASALC*ETWLRV
Trigger: GACCCGCAGCCAGGTTTCCCAGCAGAGAGCACTGGC...CTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GTGCTGCCGGAGACCCTCATCTGCCAGCAGCCATGTTTTCTGCAGCATACTCCTCCTTGTCCTCCTGGCTaGGCATCAGAGGGAACGTCA +
Preference number: 4 (lower is better)
Translates to: VLPETLICQQPCFLQHTPPCPPG*ASEGTS
Trigger: TGACGTTCCCTCTGATGCCCAGCCAGGAGGACAAGG...AGGAGTATGCTGCAGAAAACATGGCTGCTGGCAGATGAGGGTCTCCGGCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CCA 90 bp CTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCAGCGCTGCCGCTTTCTaGGCCAGAGCGAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: LPVQTFRSPRYQDVMVGLSAAAF*ARASAR
Trigger: CCTGGCACTCGCTCTGGCCCAGAAAGCGGCAGCGCT...GAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTGCTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGAGCAGTTGCGGATGCTaGGGAGGTCCTGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LLLGLLPTIRTQCSSSGQSSCGC*GGPGRP
Trigger: AGGCCTGCCAGGACCTCCCCAGCATCCGCAACTGCT...CTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR CCA 90 bp GCTAAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGAGGGAGGCCAGCAGACTaGCTCGGGCTGGCGAGCAAT +
Preference number: 4 (lower is better)
Translates to: AKPLFTPSTDLQKPQISGGRPAD*LGLASN
Trigger: ATTGCTCGCCAGCCCGAGCCAGTCTGCTGGCCTCCC...TCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR TCA 90 bp TCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGGCCGGGCCAGGCGGATaGGCACAGCCAGGATGTCAA +
Preference number: 4 (lower is better)
Translates to: SLPVQTFRSPRYQDVMVGAGPGG*AQPGCQ
Trigger: TTGACATCCTGGCTGTGCTCATCCGCCTGGCCCGGC...CCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp GGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGCCGGGCCAGGCGGATaGGCACAGCCAGGATGTCAA +
Preference number: 4 (lower is better)
Translates to: GCNGRAHCSKTAQTTCSQAGPGG*AQPGCQ
Trigger: TTGACATCCTGGCTGTGCTCATCCGCCTGGCCCGGC...CTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp GTGCCTGGGTCAATCCCCACTTCTTCCACAAAGCCCAATTTGATCTTTCCCTTCGCCGGGCCAGGCGGATaGGCACAGCCAGGATGTCAA +
Preference number: 4 (lower is better)
Translates to: VPGSIPTSSTKPNLIFPFAGPGG*AQPGCQ
Trigger: TTGACATCCTGGCTGTGCTCATCCGCCTGGCCCGGC...GAAGGGAAAGATCAAATTGGGCTTTGTGGAAGAAGTGGGGATTGACCCAGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR TCA 90 bp CCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGGGGAGCCTCAGCTATaGTGCGGCACAGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: PTIRTQCSSSGQTSVERLGEPQL*CGTGGS
Trigger: GGAGCCGCCTGTGCCGCATCATAGCTGAGGCTCCCC...CAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp ACGCAGAGGGGGCAACTGAGAATAGAGCTCAAAGCCCTCTGGGAGCGTGGAATTGAGGAGAGTGAGCAGTaGGGCTATCCGCTGCATGGA +
Preference number: 4 (lower is better)
Translates to: TQRGQLRIELKALWERGIEESEQ*GYPLHG
Trigger: TCCATGCAGCGGATAGCCTCACTGCTCACTCTCCTC...AATTCCACGCTCCCAGAGGGCTTTGAGCTCTATTCTCAGTTGCCCCCTCTGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR TCA 90 bp ACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAGGTCCTGGCAGGCCTaGGCCAGCAGAGTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: TDLQKPQISGCNGRAHCSRSWQA*ASRVPC
Trigger: GCAAGGGACTCTGCTGGCTCAGGCCTGCCAGGACCT...AGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR TCA 90 bp TCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCCAGGAACACACACATaGGCCGTGCCAGGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: SLPVQTFRSPRYQDVMVGPGTHT*AVPGGQ
Trigger: CTGCCCGCCTGGCACGGCTCATGTGTGTGTTCCTGG...CCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR GCA 90 bp CTGCTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGTGGGCCAGCAACCGCTaGTGTTCCTGCAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: LLLGLLPTIRTQCSSSGQWASNR*CSCRIS
Trigger: GGAGATCCTGCAGGAACAGCAGCGGTTGCTGGCCCA...CTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp GAGGTGCTGCCGGAGACCCTCATCTGCCAGCAGCCATGTTTTCTGCAGCATACTCACATGCAGTGCCAGTaGTCTCTGCTGGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: EVLPETLICQQPCFLQHTHMQCQ*SLLGNL
Trigger: CAGGTTTCCCAGCAGAGAGCACTGGCACTGCATGTG...AGTATGCTGCAGAAAACATGGCTGCTGGCAGATGAGGGTCTCCGGCAGCACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR GCA 90 bp GCTGAAGGAGGGCCAGGTTGTCTTCAGGAGGCACTGTGTAACACTCCAGGGACAAGCACGGATGGCGGTTaGAATGACCCCATCCACTCT +
Preference number: 4 (lower is better)
Translates to: AEGGPGCLQEALCNTPGTSTDGG*NDPIHS
Trigger: AGAGTGGATGGGGTCATTGCAACCGCCATCCGTGCT...TGTCCCTGGAGTGTTACACAGTGCCTCCTGAAGACAACCTGGCCCTCCTTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR GCA 90 bp CTAAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATTCCCGCGGCACCACCTaGAAGGCCCGCATCAGCACT +
Preference number: 4 (lower is better)
Translates to: LSHSSLPVQTFRSPRYQDSRGTT*KARIST
Trigger: AGTGCTGATGCGGGCCTTGCAGGTGGTGCCGCGGGA...ATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp AAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTCAGTGGCTGCAGCGCTaGCGCTTTCTGGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: KPLFTPSTDLQKPQISGCQWLQR*RFLGQS
Trigger: GCTCTGGCCCAGAAAGCGGCAGCGCTGCAGCCACTG...ACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCACAGTGGCTGCAGCGCTaGCGCTTTCTGGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LARHLLKGWIQDNVPIFPQWLQR*RFLGQS
Trigger: GCTCTGGCCCAGAAAGCGGCAGCGCTGCAGCCACTG...TGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp GGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCCAGTGGCTGCAGCGCTaGCGCTTTCTGGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: GQTSVERLDTGQRTHLSIQWLQR*RFLGQS
Trigger: GCTCTGGCCCAGAAAGCGGCAGCGCTGCAGCCACTG...GATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CTGCTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGAGTGCAGGGTACCCTTaGAGGTCCTGCTGGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LLLGLLPTIRTQCSSSGQSAGYP*RSCWAE
Trigger: CTCAGCCCAGCAGGACCTGCAAGGGTACCCTGCACT...CTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CCA 90 bp TCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCTGCTCCAGGCCTGTCTaGGCGCCGCCATCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: SGCNGRAHCSKTAQTTCSCSRPV*APPSCP
Trigger: GGGGCAAGATGGCGGCGCCCAGACAGGCCTGGAGCA...GGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000561603.5
CDS-3UTR CCA 90 bp AGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGATGCTCCAGGCCTGTCTaGGCGCCGCCATCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: RTQCSSSGQTSVERLDTGCSRPV*APPSCP
Trigger: GGGGCAAGATGGCGGCGCCCAGACAGGCCTGGAGCA...TCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000561603.5
CDS-3UTR CCA 90 bp GCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCAAGCCTTCTCACCAACTGCACTGCTaGGGCTGCACCAGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: AHCSKTAQTTCSQEGKPSHQLHC*GCTSCE
Trigger: CTCGCAGCTGGTGCAGCCCCAGCAGTGCAGTTGGTG...AGAAGGCTTGCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACATCCCGATGGTCCTaGAGCGGAGGCCGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: LPVQTFRSPRYQDVMVGLTSRWS*SGGRSE
Trigger: CTCAGACCGGCCTCCGCTCCAGGACCATCGGGATGT...GAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCATCACCACATCCCGATaGTCCTGGAGCGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: LPVQTFRSPRYQDVMVGLITTSR*SWSGGR
Trigger: CCGGCCTCCGCTCCAGGACCATCGGGATGTGGTGAT...GAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp AGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGAGGTCACGGCACCCTCTaGTGGGCCCACGTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: RTQCSSSGQTSVERLDTGGHGTL*WAHVGH
Trigger: GTGCCCAACGTGGGCCCACCAGAGGGTGCCGTGACC...TCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTGCTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGGGGCAATGCCAGAGCTaGGGCTTCTGGCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: LLLGLLPTIRTQCSSSGQGQCQS*GFWLQL
Trigger: AAGCTGGAGCCAGAAGCCCCAGCTCTGGCATTGCCC...CTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTGCTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGTCTGCCTCCTCTCCATaGTGGTGCAGACCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: LLLGLLPTIRTQCSSSGQSASSP*WCRPRW
Trigger: CCACCTGGGTCTGCACCACCATGGAGAGGAGGCAGA...CTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTGCTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGCTCTGCTGGGAAACCTaGCTGCGGGTCAGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: LLLGLLPTIRTQCSSSGQLCWET*LRVRWN
Trigger: GTTCCACCTGACCCGCAGCCAGGTTTCCCAGCAGAG...CTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GCTAAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGAGCCAGTGCTCTCTGCTaGGAAACCTGGCTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: AKPLFTPSTDLQKPQISGASALC*ETWLRV
Trigger: GACCCGCAGCCAGGTTTCCCAGCAGAGAGCACTGGC...TCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGGACAGGGGTTGAGGTaGGTGGGTGCTGAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: GLLPTIRTQCSSSGQTSVGQGLR*VGAELP
Trigger: CGGGAGCTCAGCACCCACCCACCTCAACCCCTGTCC...AACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGCAGGCAACGGGCACTaGGCCCACGGCTCTCCACAT +
Preference number: 4 (lower is better)
Translates to: GCNGRAHCSKTAQTTCSQAGNGH*AHGSPH
Trigger: ATGTGGAGAGCCGTGGGCCCAGTGCCCGTTGCCTGC...CTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCCCAGTGACACGAGGCTaGGGGGAGCTTCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: LRLARHLLKGWIQDNVPIPVTRG*GELQGL
Trigger: CAGCCCTTGAAGCTCCCCCCAGCCTCGTGTCACTGG...GATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAGCGCTGCCGCTTTCTaGGCCAGAGCGAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GHNVLRLARHLLKGWIQDSAAAF*ARASAR
Trigger: CCTGGCACTCGCTCTGGCCCAGAAAGCGGCAGCGCT...GTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTTCTGCTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCATGGGTGGCTGGCAGTaGCTGCAGCGCTGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: LLLLGLLPTIRTQCSSSGMGGWQ*LQRCRF
Trigger: AAAGCGGCAGCGCTGCAGCCACTGCCAGCCACCCAT...GCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp TCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCGGCAGCATGGGTGGCTaGCAGTGGCTGCAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: SGCNGRAHCSKTAQTTCSGSMGG*QWLQRC
Trigger: GCAGCGCTGCAGCCACTGCCAGCCACCCATGCTGCC...GGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp AAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTGGGAGGCCAGCAGACTaGCTCGGGCTGGCGAGCAAT +
Preference number: 4 (lower is better)
Translates to: KPLFTPSTDLQKPQISGCGRPAD*LGLASN
Trigger: ATTGCTCGCCAGCCCGAGCCAGTCTGCTGGCCTCCC...ACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR CCA 90 bp CTAAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATCCTCGGTGCAGAGCCTaGGAGGCCAGCAGACTGGCT +
Preference number: 4 (lower is better)
Translates to: LSHSSLPVQTFRSPRYQDPRCRA*EASRLA
Trigger: AGCCAGTCTGCTGGCCTCCCAGGCTCTGCACCGAGG...ATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR CCA 90 bp CCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTCACGGGGCACCAACGTaGGCGGAGCGCACCAGTAAC +
Preference number: 4 (lower is better)
Translates to: PVQTFRSPRYQDVMVGLTHGAPT*AERTSN
Trigger: GTTACTGGTGCGCTCCGCCCACGTTGGTGCCCCGTG...AGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp ACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTTGGGCTGGGGTGCAGTaGCGCGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: TDLQKPQISGCNGRAHCSWAGVQ*RDLGSL
Trigger: CAGTGAGCCGAGATCGCGCCACTGCACCCCAGCCCA...AGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR TCA 90 bp GAGCTGAAGGAGGGCCAGGTTGTCTTCAGGAGGCACTGTGTAACACTCCAGGGACTTACCAGATGTTGCTaGTTTCCCCTGTGTGTCCCG +
Preference number: 4 (lower is better)
Translates to: ELKEGQVVFRRHCVTLQGLTRCC*FPLCVP
Trigger: CGGGACACACAGGGGAAATCAGCAACATCTGGTAAG...TCCCTGGAGTGTTACACAGTGCCTCCTGAAGACAACCTGGCCCTCCTTCAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR TCA 90 bp GGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTCAGGACCCTTGTGGCTaGTTCCAGGGAATGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GLLPTIRTQCSSSGQTSVQDPCG*FQGMPG
Trigger: GCCCGGCATTCCCTGGAATCAGCCACAAGGGTCCTG...AACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp TCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGGAGCCTCAGCTATaGTGCGGCACAGGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: SSLPVQTFRSPRYQDVMVGEPQL*CGTGGS
Trigger: GGAGCCGCCTGTGCCGCATCATAGCTGAGGCTCCCC...TACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp GGACAACGTACCCATCTTTCCATCTATATCAACTATCCTAGGTCTCTGATACCCGAGGTGGGTGGGTGCTaGGCTCCCGCGGCACCACCT +
Preference number: 4 (lower is better)
Translates to: GQRTHLSIYINYPRSLIPEVGGC*APAAPP
Trigger: AGGTGGTGCCGCGGGAGCTCAGCACCCACCCACCTC...GGGTATCAGAGACCTAGGATAGTTGATATAGATGGAAAGATGGGTACGTTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp ATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCAGCAGCAGCTCATGGGTaGGGTACTCACTTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: MVGLTALKQLKQPAPRKAAAAHG*GTHFRA
Trigger: TGCCCGGAAGTGAGTACCTCACCCATGAGCTGCTGC...TGCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp TCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCAGGTCCTGGCAGGCCTaGGCCAGCAGAGTCCCTTGC +
Preference number: 4 (lower is better)
Translates to: SGCNGRAHCSKTAQTTCSRSWQA*ASRVPC
Trigger: GCAAGGGACTCTGCTGGCTCAGGCCTGCCAGGACCT...GGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR TCA 90 bp AGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGAAGGGAGAGGTGGCACTaGGCCGAGGGCTGGTACCCA +
Preference number: 4 (lower is better)
Translates to: RTQCSSSGQTSVERLDTGRERWH*AEGWYP
Trigger: TGGGTACCAGCCCTCGGCTCAGTGCCACCTCTCCCT...TCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR GCA 90 bp GCTAAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGACTGCACTGCTGGGGCTaGACCAGCTGCGAGAAACTG +
Preference number: 4 (lower is better)
Translates to: AKPLFTPSTDLQKPQISGLHCWG*TSCEKL
Trigger: CAGTTTCTCGCAGCTGGTGCAGCCCCAGCAGTGCAG...TCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp GCTAAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGACTTCACCAACTGCACTaGTGGGGCTGCACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: AKPLFTPSTDLQKPQISGLHQLH*WGCTSC
Trigger: GCAGCTGGTGCAGCCCCAGCAGTGCAGTTGGTGAAG...TCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCCCTGAAAGCTGTGGCTaGTCCCAGGAAGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LPVQTFRSPRYQDVMVGLPESCG*SQEAGS
Trigger: GCTGCCAGCTTCCTGGGAGCAGCCACAGCTTTCAGG...GAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp GCTAAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGGGCCAGCAACCGCTaGTGTTCCTGCAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: AKPLFTPSTDLQKPQISGWASNR*CSCRIS
Trigger: GGAGATCCTGCAGGAACAGCAGCGGTTGCTGGCCCA...TCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CTTCTGCTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCGGTCCTCCTGGCCTCTaGTCCTCAGAGGCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: LLLLGLLPTIRTQCSSSGGPPGL*SSEAVS
Trigger: AGAGACAGCCTCTGAGGAGCAGAGGCCAGGAGGACC...GCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCAGAAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAACTCTCCTGTGTCTGCTaGCGCCGGACAGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: LLPTIRTQCSSSGQTSVELSCVC*RRTGGK
Trigger: CTTGCCCCCTGTCCGGCGGCAGCAGACACAGGAGAG...TTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACAGTGCCAGTGCTCTCTaGTGGGAAACCTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: PSTDLQKPQISGCNGRAHSASAL*WETWLR
Trigger: CCGCAGCCAGGTTTCCCAGCAGAGAGCACTGGCACT...GTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGTGTAGCTCCCCTCGGTaGAGAGCCTGGGAGGCCAGC +
Preference number: 4 (lower is better)
Translates to: PTIRTQCSSSGQTSVERLCSSPR*RAWEAS
Trigger: GCTGGCCTCCCAGGCTCTGCACCGAGGGGAGCTACA...CAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR GCA 90 bp TGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCAGGGCTGCCACCAGATaGTGTACTGGGGACTCCCGG +
Preference number: 4 (lower is better)
Translates to: CSSSGQTSVERLDTGQRTRAATR*CTGDSR
Trigger: CCGGGAGTCCCCAGTACAGCATCTGGTGGCAGCCCT...GGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR GCA 90 bp GGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACACACTGAACCGACGCTaGAGGGGCAGGAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: GHNVLRLARHLLKGWIQDTLNRR*RGRRTR
Trigger: CCTGGTCCTCCTGCCCCTGCAGCGTCGGTTCAGTGT...GTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR GCA 90 bp ACGCAGAGGGGGCAACTGAGAATAGAGCTCAAAGCCCTCTGGGAGCGTGGAATTCCGGAGACCCTCATCTaGCAGCAGCCATGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: TQRGQLRIELKALWERGIPETLI*QQPCFL
Trigger: CAGAAAACATGGCTGCTGGCAGATGAGGGTCTCCGG...AATTCCACGCTCCCAGAGGGCTTTGAGCTCTATTCTCAGTTGCCCCCTCTGCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CCA 90 bp CAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCCACCAACTGCACTGCTaGGGCTGCACCAGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: QDVMVGLTALKQLKQPAPHQLHC*GCTSCE
Trigger: CTCGCAGCTGGTGCAGCCCCAGCAGTGCAGTTGGTG...GGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCAATCACCACATCCCGATaGTCCTGGAGCGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: LARHLLKGWIQDNVPIFPITTSR*SWSGGR
Trigger: CCGGCCTCCGCTCCAGGACCATCGGGATGTGGTGAT...TGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp AATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCGGAAGCTGGCAGCCCTaGTTCCTAGGAGTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: NGRAHCSKTAQTTCSQEGGSWQP*FLGVGV
Trigger: GACACCCACTCCTAGGAACCAGGGCTGCCAGCTTCC...GCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCAAGCTGGGGTCAAGCTaGGCCAGCAACCGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LPVQTFRSPRYQDVMVGLKLGSS*ASNRCC
Trigger: ACAGCAGCGGTTGCTGGCCCAGCTTGACCCCAGCTT...GAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp TTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGAGCAGAGGGTCCTCCTaGCCTCTGCTCCTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: LVSCLPLGHNVLRLARHLSRGSS*PLLLRG
Trigger: GCCTCTGAGGAGCAGAGGCCAGGAGGACCCTCTGCT...CAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTAGCAGAGGGTCCTCCTaGCCTCTGCTCCTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: GLLPTIRTQCSSSGQTSVSRGSS*PLLLRG
Trigger: GCCTCTGAGGAGCAGAGGCCAGGAGGACCCTCTGCT...AACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAGCAGAGGGTCCTCCTaGCCTCTGCTCCTCAGAGGC +
Preference number: 4 (lower is better)
Translates to: GHNVLRLARHLLKGWIQDSRGSS*PLLLRG
Trigger: GCCTCTGAGGAGCAGAGGCCAGGAGGACCCTCTGCT...GTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp TGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCGCCTCCTCTCCATGGTaGTGCAGACCCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: CSSSGQTSVERLDTGQRTASSPW*CRPRWV
Trigger: CACCCACCTGGGTCTGCACCACCATGGAGAGGAGGC...GGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp TTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGGCCAGTGCTCTCTGCTaGGAAACCTGGCTGCGGGTC +
Preference number: 4 (lower is better)
Translates to: LVSCLPLGHNVLRLARHLASALC*ETWLRV
Trigger: GACCCGCAGCCAGGTTTCCCAGCAGAGAGCACTGGC...CAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp ATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCATCGGGCCAGGTCAGGTaGAGGCCGGCTTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: MVGLTALKQLKQPAPRKASGQVR*RPAFFF
Trigger: GAAGAAGAAAGCCGGCCTCCACCTGACCTGGCCCGA...TGCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTGCTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGGGCCCGCATCAGCACTaGGTAGAGCTCCCTGTAAAG +
Preference number: 4 (lower is better)
Translates to: LLLGLLPTIRTQCSSSGQGPHQH*VELPVK
Trigger: CTTTACAGGGAGCTCTACCCAGTGCTGATGCGGGCC...CTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp AGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGAGGACAGGGGTTGAGGTaGGTGGGTGCTGAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: RTQCSSSGQTSVERLDTGGQGLR*VGAELP
Trigger: CGGGAGCTCAGCACCCACCCACCTCAACCCCTGTCC...TCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGGGACAGGGGTTGAGGTaGGTGGGTGCTGAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: LPLGHNVLRLARHLLKGWGQGLR*VGAELP
Trigger: CGGGAGCTCAGCACCCACCCACCTCAACCCCTGTCC...CCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CAGTCTCTGGAGGTAGTGCTGACGCAGAGGGGGCAACTGAGAATAGAGCTCAAAAGGCTATCCGCTGCATaGACAGGGGTTGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: QSLEVVLTQRGQLRIELKRLSAA*TGVEVG
Trigger: ACCCACCTCAACCCCTGTCCATGCAGCGGATAGCCT...TTTGAGCTCTATTCTCAGTTGCCCCCTCTGCGTCAGCACTACCTCCAGAGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CCA 90 bp CCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGCAGGCAACGGGCACTaGGCCCACGGCTCTCCACAT +
Preference number: 4 (lower is better)
Translates to: PTIRTQCSSSGQTSVERLAGNGH*AHGSPH
Trigger: ATGTGGAGAGCCGTGGGCCCAGTGCCCGTTGCCTGC...CAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp TCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCCCGGGGCAGCCAATATaGCAGCCAGCTGGCCACACA +
Preference number: 4 (lower is better)
Translates to: SGQTSVERLDTGQRTHLSPGQPI*QPAGHT
Trigger: TGTGTGGCCAGCTGGCTGCCATATTGGCTGCCCCGG...GGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCACCGGGGCAGCCAATATaGCAGCCAGCTGGCCACACA +
Preference number: 4 (lower is better)
Translates to: LARHLLKGWIQDNVPIFPPGQPI*QPAGHT
Trigger: TGTGTGGCCAGCTGGCTGCCATATTGGCTGCCCCGG...TGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCCAGGTACTGCAGGTaGTACTCATGGCGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: PVQTFRSPRYQDVMVGLTARYCR*YSWRRA
Trigger: GGCCCTGCGCCATGAGTACCACCTGCAGTACCTGGC...AGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCATGGGTGGCTGGCAGTaGCTGCAGCGCTGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: QDVMVGLTALKQLKQPAPMGGWQ*LQRCRF
Trigger: AAAGCGGCAGCGCTGCAGCCACTGCCAGCCACCCAT...GGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp TCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCAGCATGGGTGGCTaGCAGTGGCTGCAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: SCLPLGHNVLRLARHLLKGSMGG*QWLQRC
Trigger: GCAGCGCTGCAGCCACTGCCAGCCACCCATGCTGCC...TTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAACCTCGGTGCAGAGCCTaGGAGGCCAGCAGACTGGCT +
Preference number: 4 (lower is better)
Translates to: DLQKPQISGCNGRAHCSKPRCRA*EASRLA
Trigger: AGCCAGTCTGCTGGCCTCCCAGGCTCTGCACCGAGG...TTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR CCA 90 bp TCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCACGGGGCACCAACGTaGGCGGAGCGCACCAGTAAC +
Preference number: 4 (lower is better)
Translates to: SGCNGRAHCSKTAQTTCSHGAPT*AERTSN
Trigger: GTTACTGGTGCGCTCCGCCCACGTTGGTGCCCCGTG...GGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp TCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGGCTCTGTCACTGGGCTaGGGTGCAGTGGCGCGATCT +
Preference number: 4 (lower is better)
Translates to: SLPVQTFRSPRYQDVMVGALSLG*GAVARS
Trigger: AGATCGCGCCACTGCACCCCAGCCCAGTGACAGAGC...CCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR TCA 90 bp AATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCCCAGCTGCGAGAAACTaGCTCTGGAAGTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: NGRAHCSKTAQTTCSQEGPAARN*LWKCSR
Trigger: CCTGCTGCACTTCCAGAGTCAGTTTCTCGCAGCTGG...GCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp ATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCACACAACTTCCCCAACTaGTGGGCCCTTGGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: MVGLTALKQLKQPAPRKAHNFPN*WALGFS
Trigger: GCTGAAGCCAAGGGCCCATCAGTTGGGGAAGTTGTG...TGCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp GCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCAAGCCTTCTACCAGATTGGGTCCCTaGAAGCTGTGGCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: AHCSKTAQTTCSQEGKPSTRLGP*KLWLLP
Trigger: TGGGAGCAGCCACAGCTTTCAGGGACCCAATCTGGT...AGAAGGCTTGCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp TTTATTTTAATGCACAACTATAGCATTCATATGCCTCAGCCCAGGGCAGGGGTTGAGGTGGGTGGGTGCTaGGCTCCCGCGGCACCACCT +
Preference number: 4 (lower is better)
Translates to: FILMHNYSIHMPQPRAGVEVGGC*APAAPP
Trigger: AGGTGGTGCCGCGGGAGCTCAGCACCCACCCACCTC...AACCCCTGCCCTGGGCTGAGGCATATGAATGCTATAGTTGTGCATTAAAATAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp CTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCGAGGAGAGTGAGCAGTaGGGCTATCCGCTGCATGGA +
Preference number: 4 (lower is better)
Translates to: LRLARHLLKGWIQDNVPIEESEQ*GYPLHG
Trigger: TCCATGCAGCGGATAGCCTCACTGCTCACTCTCCTC...GATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp CTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACAACACCTGTGTCCAAGTaGCTAAGGAAGGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: LLGLLPTIRTQCSSSGQTTPVSK*LRKGWP
Trigger: CGGCCACCCCTTCCTTAGTCACTTGGACACAGGTGT...TGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp CTTCTGCTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCACACCTGTGTCCAAGTaGCTAAGGAAGGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: LLLLGLLPTIRTQCSSSGTPVSK*LRKGWP
Trigger: CGGCCACCCCTTCCTTAGTCACTTGGACACAGGTGT...GCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp TCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCCCAATCCTCCGGGCATaGGCTTGGTTGCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SGQTSVERLDTGQRTHLSPILRA*AWLLAP
Trigger: TGGAGCCAGCAACCAAGCTCATGCCCGGAGGATTGG...GGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp CAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCATGCAGAGAAAGGTGTaGGGTGTGGGGCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: QDVMVGLTALKQLKQPAPMQRKV*GVGQPQ
Trigger: CTGGGGCTGCCCCACACCTCACACCTTTCTCTGCAT...GGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp TCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGGCAGCAGCTCATGGGTaGGGTACTCACTTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: SLPVQTFRSPRYQDVMVGAAAHG*GTHFRA
Trigger: TGCCCGGAAGTGAGTACCTCACCCATGAGCTGCTGC...CCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp ACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACCAGGAACACACACATaGGCCGTGCCAGGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: TFRSPRYQDVMVGLTALKPGTHT*AVPGGQ
Trigger: CTGCCCGCCTGGCACGGCTCATGTGTGTGTTCCTGG...TTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR GCA 90 bp CAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCGTCTCGACAGCATCTTaGTGCTCCAGCTGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: QDVMVGLTALKQLKQPAPVSTAS*CSSCLP
Trigger: GGGGAGGCAGCTGGAGCAGCAAGATGCTGTCGAGAC...GGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp GGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCCTGCACTGCTGGGGCTaGACCAGCTGCGAGAAACTG +
Preference number: 4 (lower is better)
Translates to: GQTSVERLDTGQRTHLSILHCWG*TSCEKL
Trigger: CAGTTTCTCGCAGCTGGTGCAGCCCCAGCAGTGCAG...GATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp ATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCAAACCGCTGCTGTTCCTaGAGGATCTCCTCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: MVGLTALKQLKQPAPRKANRCCS*RISSGA
Trigger: GGCTCCTGAGGAGATCCTGCAGGAACAGCAGCGGTT...TGCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CTAAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGGTCCTCCTGGCCTCTaGTCCTCAGAGGCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: LSHSSLPVQTFRSPRYQDGPPGL*SSEAVS
Trigger: AGAGACAGCCTCTGAGGAGCAGAGGCCAGGAGGACC...ATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp AATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCATACCCCGCTCTCTCTaGCTCCTCTCCATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: NGRAHCSKTAQTTCSQEGIPRSL*LLSMVV
Trigger: CACCACCATGGAGAGGAGGCAGAGAGAGCGGGGTAT...GCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp GACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAGCTGATTCCAGGGAATaGCGGGCCAGGCGGATGAGC +
Preference number: 4 (lower is better)
Translates to: DLQKPQISGCNGRAHCSKADSRE*RARRMS
Trigger: GCTCATCCGCCTGGCCCGGCATTCCCTGGAATCAGC...TTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTACTAGGGGTAGGCCCTaGCCCCACAGGAGACCAACT +
Preference number: 4 (lower is better)
Translates to: PVQTFRSPRYQDVMVGLTTRGRP*PHRRPT
Trigger: AGTTGGTCTCCTGTGGGGGCAGGGCCTACCCCTAGT...AGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CTAAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGACGGAGGGCCTCGGTaGTCAGCATCTCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: LSHSSLPVQTFRSPRYQDDGGPR*SASQLP
Trigger: AGGAAGCTGAGATGCTGAGCACCGAGGCCCTCCGTC...ATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CTTCTGCTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCTCCTCTGACAGGCGCTaGATGTCCTGGAGCCAATCC +
Preference number: 4 (lower is better)
Translates to: LLLLGLLPTIRTQCSSSGSSDRR*MSWSQS
Trigger: GGATTGGCTCCAGGACATGCAGCGCCTGTCAGAGGA...GCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCAGAAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp GCTAAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATCCTCTGACAGGCGCTaGATGTCCTGGAGCCAATCC +
Preference number: 4 (lower is better)
Translates to: AKPLFTPSTDLQKPQISGSSDRR*MSWSQS
Trigger: GGATTGGCTCCAGGACATGCAGCGCCTGTCAGAGGA...TCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp TCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGGCGAGTGCCAGGTACTaGAGGTGGTACTCATGGCGC +
Preference number: 4 (lower is better)
Translates to: SLPVQTFRSPRYQDVMVGASARY*RWYSWR
Trigger: GCGCCATGAGTACCACCTGCAGTACCTGGCACTCGC...CCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp GTGCCTGGGTCAATCCCCACTTCTTCCACAAAGCCCAATTTGATCTTTCCCTTCCTGGGCCAGAGCGAGTaGCAGGTACTGCAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: VPGSIPTSSTKPNLIFPFLGQSE*QVLQVV
Trigger: TACCACCTGCAGTACCTGGCACTCGCTCTGGCCCAG...GAAGGGAAAGATCAAATTGGGCTTTGTGGAAGAAGTGGGGATTGACCCAGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR GCA 90 bp CCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACCACACCGAGGGACCCTaGTGCTTCCTAACGACAGCT +
Preference number: 4 (lower is better)
Translates to: PSTDLQKPQISGCNGRAHHTEGP*CFLTTA
Trigger: AGCTGTCGTTAGGAAGCAGCAGGGTCCCTCGGTGTG...GTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR GCA 90 bp GACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAGGTAGCAGTTGCGGATaGTGGGGAGGTCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: DLQKPQISGCNGRAHCSKGSSCG*WGGPGR
Trigger: CCTGCCAGGACCTCCCCAGCATCCGCAACTGCTACC...TTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR GCA 90 bp CCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACGAGTCAGGTAGCAGTTaGGGATGCTGGGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: PSTDLQKPQISGCNGRAHESGSS*GCWGGP
Trigger: AGGACCTCCCCAGCATCCGCAACTGCTACCTGACTC...GTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR GCA 90 bp CCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGCTGGGCGAGGAGGGCTaGCACCAGATGCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: PTIRTQCSSSGQTSVERLLGEEG*HQMLYW
Trigger: CCAGTACAGCATCTGGTGGCAGCCCTCCTCGCCCAG...CAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR GCA 90 bp CTGCTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGCCGGAGACCCTCATCTaGCAGCAGCCATGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: LLLGLLPTIRTQCSSSGQPETLI*QQPCFL
Trigger: CAGAAAACATGGCTGCTGGCAGATGAGGGTCTCCGG...CTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CTGCTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGGGAAGGCAAGCCTTCTaGTCCTTGGTCTCCTGCCTA +
Preference number: 4 (lower is better)
Translates to: LLLGLLPTIRTQCSSSGQGRQAF*SLVSCL
Trigger: TAGGCAGGAGACCAAGGAGCAGAAGGCTTGCCTTCC...CTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp ACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTCACCTCGGACTCCCCTaGCTTCGGTCTCGACAGCAT +
Preference number: 4 (lower is better)
Translates to: TDLQKPQISGCNGRAHCSHLGLP*LRSRQH
Trigger: ATGCTGTCGAGACCGAAGCCAGGGGAGTCCGAGGTG...AGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTAAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATCACCTCGGACTCCCCTaGCTTCGGTCTCGACAGCAT +
Preference number: 4 (lower is better)
Translates to: LSHSSLPVQTFRSPRYQDHLGLP*LRSRQH
Trigger: ATGCTGTCGAGACCGAAGCCAGGGGAGTCCGAGGTG...ATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACCACCTCGGACTCCCCTaGCTTCGGTCTCGACAGCAT +
Preference number: 4 (lower is better)
Translates to: GHNVLRLARHLLKGWIQDHLGLP*LRSRQH
Trigger: ATGCTGTCGAGACCGAAGCCAGGGGAGTCCGAGGTG...GTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGCACCAACTGCACTGCTaGGGCTGCACCAGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: LPLGHNVLRLARHLLKGWHQLHC*GCTSCE
Trigger: CTCGCAGCTGGTGCAGCCCCAGCAGTGCAGTTGGTG...CCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp TCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCACATCCCGATGGTCCTaGAGCGGAGGCCGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: SGCNGRAHCSKTAQTTCSTSRWS*SGGRSE
Trigger: CTCAGACCGGCCTCCGCTCCAGGACCATCGGGATGT...GGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCAAGCCTTCTCCTCAGCCTCTCTTCTaGGTCCTCATCCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: AHCSKTAQTTCSQEGKPSPQPLF*VLILRQ
Trigger: CTGCCTGAGGATGAGGACCCAGAAGAGAGGCTGAGG...AGAAGGCTTGCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp TTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGCTGGTGGGCCCACGTTaGGCACAACTTCCCCAACTG +
Preference number: 4 (lower is better)
Translates to: LVSCLPLGHNVLRLARHLLVGPR*AQLPQL
Trigger: CAGTTGGGGAAGTTGTGCCCAACGTGGGCCCACCAG...CAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACACACGGCACCCTCTGGTaGGCCCACGTTGGGCACAAC +
Preference number: 4 (lower is better)
Translates to: LQKPQISGCNGRAHCSKTHGTLW*AHVGHN
Trigger: GTTGTGCCCAACGTGGGCCCACCAGAGGGTGCCGTG...TGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp ATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCGCAGACCCAGGTGGGTaGGCAGGTCCACGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: ISGCNGRAHCSKTAQTTCADPGG*AGPRQG
Trigger: CCCCTGACGTGGACCTGCCCACCCACCTGGGTCTGC...GCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp AGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATATCAACTATCCTAGGGCAGACCCAGGTGGGTaGGCAGGTCCACGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: RLDTGQRTHLSIYINYPRADPGG*AGPRQG
Trigger: CCCCTGACGTGGACCTGCCCACCCACCTGGGTCTGC...CCTAGGATAGTTGATATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp AAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTTCTGCCTCCTCTCCATaGTGGTGCAGACCCAGGTGG +
Preference number: 4 (lower is better)
Translates to: KPLFTPSTDLQKPQISGCSASSP*WCRPRW
Trigger: CCACCTGGGTCTGCACCACCATGGAGAGGAGGCAGA...ACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTGGCTGCGGGTCAGGTaGAACAGCTCCTGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: LRLARHLLKGWIQDNVPIWLRVR*NSSCRE
Trigger: TTCCCTACAGGAGCTGTTCCACCTGACCCGCAGCCA...GATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTAAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATCCAAACTCACCAGCCTaGGCCCTGCTGATGACCTGG +
Preference number: 4 (lower is better)
Translates to: LSHSSLPVQTFRSPRYQDPNSPA*ALLMTW
Trigger: CCAGGTCATCAGCAGGGCCCAGGCTGGTGAGTTTGG...ATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCCCAAACTCACCAGCCTaGGCCCTGCTGATGACCTGG +
Preference number: 4 (lower is better)
Translates to: QDVMVGLTALKQLKQPAPPNSPA*ALLMTW
Trigger: CCAGGTCATCAGCAGGGCCCAGGCTGGTGAGTTTGG...GGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCAAGCCTTCTCCTTGTCCTCCTGGCTaGGCATCAGAGGGAACGTCA +
Preference number: 4 (lower is better)
Translates to: AHCSKTAQTTCSQEGKPSPCPPG*ASEGTS
Trigger: TGACGTTCCCTCTGATGCCCAGCCAGGAGGACAAGG...AGAAGGCTTGCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp AATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCTCCTCCTTGTCCTCCTaGCTGGGCATCAGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: NGRAHCSKTAQTTCSQEGSSLSS*LGIRGN
Trigger: GTTCCCTCTGATGCCCAGCCAGGAGGACAAGGAGGA...GCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTTCGGGCCAGGTCAGGTaGAGGCCGGCTTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: PVQTFRSPRYQDVMVGLTSGQVR*RPAFFF
Trigger: GAAGAAGAAAGCCGGCCTCCACCTGACCTGGCCCGA...AGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGACCACCGCAGGTCCTaGGTATGTCACCTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: GLLPTIRTQCSSSGQTSVDHRRS*VCHLQH
Trigger: GTGCTGGAGGTGACATACCCAGGACCTGCGGTGGTC...AACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp ACGCAGAGGGGGCAACTGAGAATAGAGCTCAAAGCCCTCTGGGAGCGTGGAATTCCACAGGAGACCAACTaGTGGGCAAGAACTCTCGAA +
Preference number: 4 (lower is better)
Translates to: TQRGQLRIELKALWERGIPQETN*WARTLE
Trigger: TTCGAGAGTTCTTGCCCACCAGTTGGTCTCCTGTGG...AATTCCACGCTCCCAGAGGGCTTTGAGCTCTATTCTCAGTTGCCCCCTCTGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CCA 90 bp GCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCAAGCCTTCTAGGCTATCCGCTGCATaGACAGGGGTTGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: AHCSKTAQTTCSQEGKPSRLSAA*TGVEVG
Trigger: ACCCACCTCAACCCCTGTCCATGCAGCGGATAGCCT...AGAAGGCTTGCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCAAGCCTTCTGCTGCCAGGGTTAGCTaGGTGAGGAGAGTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: AHCSKTAQTTCSQEGKPSAARVS*VRRVSS
Trigger: ACTGCTCACTCTCCTCACCCAGCTAACCCTGGCAGC...AGAAGGCTTGCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTAGGCGCTGCATGTCCTaGAGCCAATCCTCCGGGCAT +
Preference number: 4 (lower is better)
Translates to: PVQTFRSPRYQDVMVGLTRRCMS*SQSSGH
Trigger: ATGCCCGGAGGATTGGCTCCAGGACATGCAGCGCCT...AGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGCGCTGCATGTCCTaGAGCCAATCCTCCGGGCAT +
Preference number: 4 (lower is better)
Translates to: QDVMVGLTALKQLKQPAPRRCMS*SQSSGH
Trigger: ATGCCCGGAGGATTGGCTCCAGGACATGCAGCGCCT...GGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGGGAGCTTCAAGGGCTaGCACACAGGACAGCGGGTT +
Preference number: 4 (lower is better)
Translates to: GCNGRAHCSKTAQTTCSQGSFKG*HTGQRV
Trigger: AACCCGCTGTCCTGTGTGCCAGCCCTTGAAGCTCCC...CTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACAATATGGCAGCCAGCTaGCCACACAGCCCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: PSTDLQKPQISGCNGRAHNMAAS*PHSPLW
Trigger: CCACAAGGGGCTGTGTGGCCAGCTGGCTGCCATATT...GTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTCCGGGGCAGCCAATATaGCAGCCAGCTGGCCACACA +
Preference number: 4 (lower is better)
Translates to: ARHLLKGWIQDNVPIFPSPGQPI*QPAGHT
Trigger: TGTGTGGCCAGCTGGCTGCCATATTGGCTGCCCCGG...AGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGTGCAGGTGGTACTCATaGCGCAGGGCCCATGCAGAG +
Preference number: 4 (lower is better)
Translates to: GCNGRAHCSKTAQTTCSQCRWYS*RRAHAE
Trigger: CTCTGCATGGGCCCTGCGCCATGAGTACCACCTGCA...CTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAGCCAGGTACTGCAGGTaGTACTCATGGCGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LLPTIRTQCSSSGQTSVEARYCR*YSWRRA
Trigger: GGCCCTGCGCCATGAGTACCACCTGCAGTACCTGGC...TTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGCAGTTGCGGATGCTaGGGAGGTCCTGGCAGGCCT +
Preference number: 4 (lower is better)
Translates to: LLPTIRTQCSSSGQTSVESSCGC*GGPGRP
Trigger: AGGCCTGCCAGGACCTCCCCAGCATCCGCAACTGCT...TTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR CCA 90 bp AGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGATGCCCATGGTGTCTGTaGGAGAGAGTCCCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: RTQCSSSGQTSVERLDTGCPWCL*ERVPRG
Trigger: CCCCCTCGGGACTCTCTCCCACAGACACCATGGGCA...TCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR CCA 90 bp AATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCGCATGGCTGTGCCCATaGTGTCTGTGGGAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: NGRAHCSKTAQTTCSQEGAWLCP*CLWERV
Trigger: GACTCTCTCCCACAGACACCATGGGCACAGCCATGC...GCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR CCA 90 bp TCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCACTGCAGGACCCGCATaGCTGTGCCCATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SGQTSVERLDTGQRTHLSTAGPA*LCPWCL
Trigger: CAGACACCATGGGCACAGCCATGCGGGTCCTGCAGT...GGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR CCA 90 bp GACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAGTCTTGCTCTGTCACTaGGCTGGGGTGCAGTGGCGC +
Preference number: 4 (lower is better)
Translates to: DLQKPQISGCNGRAHCSKVLLCH*AGVQWR
Trigger: GCGCCACTGCACCCCAGCCCAGTGACAGAGCAAGAC...TTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR TCA 90 bp CCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTCCAGCTGCGAGAAACTaGCTCTGGAAGTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: PVQTFRSPRYQDVMVGLTPAARN*LWKCSR
Trigger: CCTGCTGCACTTCCAGAGTCAGTTTCTCGCAGCTGG...AGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp CTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACAGCAGTGATGTGCTaGTCATGCCTCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LPVQTFRSPRYQDVMVGLTAVMC*SCLLSL
Trigger: GAGGCTGAGGAGGCATGATCAGCACATCACTGCTGT...GAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp GGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTGCAGCCATTCTTTCTaGGGGGTCACGGGCAATGCC +
Preference number: 4 (lower is better)
Translates to: GQTSVERLDTGQRTHLSICSHSF*GVTGNA
Trigger: GGCATTGCCCGTGACCCCTCAGAAAGAATGGCTGCA...GATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp AATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCGCCAGTAGTTCTCCCTaGAGACTGAATCGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: NGRAHCSKTAQTTCSQEGASSSP*RLNRAC
Trigger: GCAGGCTCGATTCAGTCTTCAGGGAGAACTACTGGC...GCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp CTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCGGATGGCGGTTGCAATaGCCCCATCCACTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: LPVQTFRSPRYQDVMVGLGWRLQ*PHPLCH
Trigger: ATGACAGAGTGGATGGGGTCATTGCAACCGCCATCC...GAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp ACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGGACCCTTGTGGCTaGTTCCAGGGAATGCCGGGC +
Preference number: 4 (lower is better)
Translates to: TFRSPRYQDVMVGLTALKQDPCG*FQGMPG
Trigger: GCCCGGCATTCCCTGGAATCAGCCACAAGGGTCCTG...TTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp CTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGCCAATCCTCCGGGCATaGGCTTGGTTGCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LPLGHNVLRLARHLLKGWPILRA*AWLLAP
Trigger: TGGAGCCAGCAACCAAGCTCATGCCCGGAGGATTGG...CCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp CAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCTCCTGCGGGCAGCTTTaGCCTCATCTGAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: QDVMVGLTALKQLKQPAPSCGQL*PHLSSV
Trigger: CACAGAGCTCAGATGAGGTCAAAGCTGCCCGCAGGA...GGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000561603.5
CDS-3UTR GCA 90 bp CTTCTGCTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCTGGGGCTGCACCAGCTaGGAGAAACTGACTCTGGAA +
Preference number: 4 (lower is better)
Translates to: LLLLGLLPTIRTQCSSSGWGCTS*EKLTLE
Trigger: TTCCAGAGTCAGTTTCTCGCAGCTGGTGCAGCCCCA...GCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAACTTCACCAACTGCACTaGTGGGGCTGCACCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LLPTIRTQCSSSGQTSVELHQLH*WGCTSC
Trigger: GCAGCTGGTGCAGCCCCAGCAGTGCAGTTGGTGAAG...TTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGCCTGAAAGCTGTGGCTaGTCCCAGGAAGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PTIRTQCSSSGQTSVERLPESCG*SQEAGS
Trigger: GCTGCCAGCTTCCTGGGAGCAGCCACAGCTTTCAGG...CAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp GTGCCTGGGTCAATCCCCACTTCTTCCACAAAGCCCAATTTGATCTTTCCCTTCAACCGCTGCTGTTCCTaGAGGATCTCCTCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: VPGSIPTSSTKPNLIFPFNRCCS*RISSGA
Trigger: GGCTCCTGAGGAGATCCTGCAGGAACAGCAGCGGTT...GAAGGGAAAGATCAAATTGGGCTTTGTGGAAGAAGTGGGGATTGACCCAGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR GCA 90 bp CAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATCTCTCCTGTGTCTGCTaGCGCCGGACAGGGGGCAAG +
Preference number: 4 (lower is better)
Translates to: QTSVERLDTGQRTHLSIYLSCVC*RRTGGK
Trigger: CTTGCCCCCTGTCCGGCGGCAGCAGACACAGGAGAG...ATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CTGCTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGAGACTGAATCGAGCCTaGATCCTCTCCTGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: LLLGLLPTIRTQCSSSGQRLNRA*ILSCVC
Trigger: GCAGACACAGGAGAGGATGCAGGCTCGATTCAGTCT...CTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp TCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATACCCCGCTCTCTCTaGCTCCTCTCCATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SGQTSVERLDTGQRTHLSIPRSL*LLSMVV
Trigger: CACCACCATGGAGAGGAGGCAGAGAGAGCGGGGTAT...GGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp GACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAGCTGGGAAACCTGGCTaGGGGTCAGGTGGAACAGCT +
Preference number: 4 (lower is better)
Translates to: DLQKPQISGCNGRAHCSKAGKPG*GSGGTA
Trigger: AGCTGTTCCACCTGACCCGCAGCCAGGTTTCCCAGC...TTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp GACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAAGTGCCAGTGCTCTCTaGTGGGAAACCTGGCTGCGG +
Preference number: 4 (lower is better)
Translates to: DLQKPQISGCNGRAHCSKSASAL*WETWLR
Trigger: CCGCAGCCAGGTTTCCCAGCAGAGAGCACTGGCACT...TTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACACCTGGGCTAACACATaGAGTGCCAGTGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: PSTDLQKPQISGCNGRAHTWANT*SASALC
Trigger: GCAGAGAGCACTGGCACTGCATGTGTTAGCCCAGGT...GTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCACCTGGGCTAACACATaGAGTGCCAGTGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LRLARHLLKGWIQDNVPITWANT*SASALC
Trigger: GCAGAGAGCACTGGCACTGCATGTGTTAGCCCAGGT...GATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp TCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGCTGATTCCAGGGAATaGCGGGCCAGGCGGATGAGC +
Preference number: 4 (lower is better)
Translates to: SSLPVQTFRSPRYQDVMVADSRE*RARRMS
Trigger: GCTCATCCGCCTGGCCCGGCATTCCCTGGAATCAGC...TACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp AGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGAACTAGGGGTAGGCCCTaGCCCCACAGGAGACCAACT +
Preference number: 4 (lower is better)
Translates to: RTQCSSSGQTSVERLDTGTRGRP*PHRRPT
Trigger: AGTTGGTCTCCTGTGGGGGCAGGGCCTACCCCTAGT...TCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp TTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGACGGAGGGCCTCGGTaGTCAGCATCTCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: FTPSTDLQKPQISGCNGRDGGPR*SASQLP
Trigger: AGGAAGCTGAGATGCTGAGCACCGAGGCCCTCCGTC...CCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp GGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACTTTCAGCAGGGGTACTaGCGGCTGCCAGGGTTAGCT +
Preference number: 4 (lower is better)
Translates to: GHNVLRLARHLLKGWIQDFQQGY*RLPGLA
Trigger: AGCTAACCCTGGCAGCCGGCAGTACCCCTGCTGAAA...GTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp AAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTTCCTCTGACAGGCGCTaGATGTCCTGGAGCCAATCC +
Preference number: 4 (lower is better)
Translates to: KPLFTPSTDLQKPQISGCSSDRR*MSWSQS
Trigger: GGATTGGCTCCAGGACATGCAGCGCCTGTCAGAGGA...ACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp TGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCATGGCGCAGGGCCCATaGAGAGAAAGGTGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: CSSSGQTSVERLDTGQRTMAQGP*RERCEV
Trigger: CACCTCACACCTTTCTCTGCATGGGCCCTGCGCCAT...GGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp AGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGAGCGAGTGCCAGGTACTaGAGGTGGTACTCATGGCGC +
Preference number: 4 (lower is better)
Translates to: RTQCSSSGQTSVERLDTGASARY*RWYSWR
Trigger: GCGCCATGAGTACCACCTGCAGTACCTGGCACTCGC...TCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp TCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCTGGGCCAGAGCGAGTaGCAGGTACTGCAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: SGCNGRAHCSKTAQTTCSLGQSE*QVLQVV
Trigger: TACCACCTGCAGTACCTGGCACTCGCTCTGGCCCAG...GGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp TGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCACCGAGGGACCCTGCTaGTTCCTAACGACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: CSSSGQTSVERLDTGQRTTEGPC*FLTTAG
Trigger: ACCAGCTGTCGTTAGGAAGCAGCAGGGTCCCTCGGT...GGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR GCA 90 bp GTCCTTCTAGCACAAGGATCAGGGTTAAAGACTACAGAGCAGATGTTGGGGAAACTGGGCGAGGAGGGCTaGCACCAGATGCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: VLLAQGSGLKTTEQMLGKLGEEG*HQMLYW
Trigger: CCAGTACAGCATCTGGTGGCAGCCCTCCTCGCCCAG...TTTCCCCAACATCTGCTCTGTAGTCTTTAACCCTGATCCTTGTGCTAGAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR GCA 90 bp CTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAACACTGAACCGACGCTaGAGGGGCAGGAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: LQKPQISGCNGRAHCSKTTLNRR*RGRRTR
Trigger: CCTGGTCCTCCTGCCCCTGCAGCGTCGGTTCAGTGT...TGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR GCA 90 bp CTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCCCGGAGACCCTCATCTaGCAGCAGCCATGTTTTCTG +
Preference number: 4 (lower is better)
Translates to: LRLARHLLKGWIQDNVPIPETLI*QQPCFL
Trigger: CAGAAAACATGGCTGCTGGCAGATGAGGGTCTCCGG...GATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp TGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCGAGGCCGGTCTGAGTTaGCATCACCACCGCCCCTAT +
Preference number: 4 (lower is better)
Translates to: CLPLGHNVLRLARHLLKGEAGLS*HHHRPY
Trigger: ATAGGGGCGGTGGTGATGCCAACTCAGACCGGCCTC...GCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGGAGGCCGGTCTGAGTTaGCATCACCACCGCCCCTAT +
Preference number: 4 (lower is better)
Translates to: LPLGHNVLRLARHLLKGWEAGLS*HHHRPY
Trigger: ATAGGGGCGGTGGTGATGCCAACTCAGACCGGCCTC...CCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAATCACCACATCCCGATaGTCCTGGAGCGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: LQKPQISGCNGRAHCSKTITTSR*SWSGGR
Trigger: CCGGCCTCCGCTCCAGGACCATCGGGATGTGGTGAT...TGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTAAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATCCTCAGCCTCTCTTCTaGGTCCTCATCCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LSHSSLPVQTFRSPRYQDPQPLF*VLILRQ
Trigger: CTGCCTGAGGATGAGGACCCAGAAGAGAGGCTGAGG...ATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp AGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATATCAACTATCCTAGGCACGGCACCCTCTGGTaGGCCCACGTTGGGCACAAC +
Preference number: 4 (lower is better)
Translates to: RLDTGQRTHLSIYINYPRHGTLW*AHVGHN
Trigger: GTTGTGCCCAACGTGGGCCCACCAGAGGGTGCCGTG...CCTAGGATAGTTGATATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp TCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCGGAAGCTGGCAGCCCTaGTTCCTAGGAGTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: SGCNGRAHCSKTAQTTCSGSWQP*FLGVGV
Trigger: GACACCCACTCCTAGGAACCAGGGCTGCCAGCTTCC...GGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTAAGCTGGGGTCAAGCTaGGCCAGCAACCGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ARHLLKGWIQDNVPIFPSKLGSS*ASNRCC
Trigger: ACAGCAGCGGTTGCTGGCCCAGCTTGACCCCAGCTT...AGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACAAGAAAGCAACCAAGCTaGGGTCAAGCTGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: LLGLLPTIRTQCSSSGQTRKQPS*GQAGPA
Trigger: TGCTGGCCCAGCTTGACCCCAGCTTGGTTGCTTTCT...TGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GCTAAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGAAGAAAGCAACCAAGCTaGGGTCAAGCTGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: AKPLFTPSTDLQKPQISGRKQPS*GQAGPA
Trigger: TGCTGGCCCAGCTTGACCCCAGCTTGGTTGCTTTCT...TCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACAGAAAGCAACCAAGCTaGGGTCAAGCTGGGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PSTDLQKPQISGCNGRAHRKQPS*GQAGPA
Trigger: TGCTGGCCCAGCTTGACCCCAGCTTGGTTGCTTTCT...GTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp ATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCAAAGTCCTGGGTCCAGTaGAGCTTCTCCAGCTCGACA +
Preference number: 4 (lower is better)
Translates to: MVGLTALKQLKQPAPRKAKSWVQ*SFSSST
Trigger: TGTCGAGCTGGAGAAGCTCCACTGGACCCAGGACTT...TGCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp ACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATGCCTCCTCTCCATGGTaGTGCAGACCCAGGTGGGTG +
Preference number: 4 (lower is better)
Translates to: TIRTQCSSSGQTSVERLDASSPW*CRPRWV
Trigger: CACCCACCTGGGTCTGCACCACCATGGAGAGGAGGC...ATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTGGCTGCGGGTCAGGTaGAACAGCTCCTGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: GQTSVERLDTGQRTHLSIWLRVR*NSSCRE
Trigger: TTCCCTACAGGAGCTGTTCCACCTGACCCGCAGCCA...GATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGCCCTGCTGATGACCTaGGCTAACACATGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: GCNGRAHCSKTAQTTCSQALLMT*ANTCSA
Trigger: GGCACTGCATGTGTTAGCCCAGGTCATCAGCAGGGC...CTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGTCGGGCCAGGTCAGGTaGAGGCCGGCTTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LPLGHNVLRLARHLLKGWSGQVR*RPAFFF
Trigger: GAAGAAGAAAGCCGGCCTCCACCTGACCTGGCCCGA...CCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp TCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCGACCACCGCAGGTCCTaGGTATGTCACCTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: SGCNGRAHCSKTAQTTCSDHRRS*VCHLQH
Trigger: GTGCTGGAGGTGACATACCCAGGACCTGCGGTGGTC...GGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp ATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCAGGCAAGGCCAGTTCTTaGGGAGCCTCAGCTATGATG +
Preference number: 4 (lower is better)
Translates to: MVGLTALKQLKQPAPRKAGKASS*GASAMM
Trigger: CATCATAGCTGAGGCTCCCCAAGAACTGGCCTTGCC...TGCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCGGCCCGCATCAGCACTaGGTAGAGCTCCCTGTAAAG +
Preference number: 4 (lower is better)
Translates to: GQTSVERLDTGQRTHLSIGPHQH*VELPVK
Trigger: CTTTACAGGGAGCTCTACCCAGTGCTGATGCGGGCC...GATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp TCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCAGGCGCTGCATGTCCTaGAGCCAATCCTCCGGGCAT +
Preference number: 4 (lower is better)
Translates to: SGCNGRAHCSKTAQTTCSRRCMS*SQSSGH
Trigger: ATGCCCGGAGGATTGGCTCCAGGACATGCAGCGCCT...GGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp TTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGGGAGCTTCAAGGGCTaGCACACAGGACAGCGGGTT +
Preference number: 4 (lower is better)
Translates to: FTPSTDLQKPQISGCNGRGSFKG*HTGQRV
Trigger: AACCCGCTGTCCTGTGTGCCAGCCCTTGAAGCTCCC...CCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp ACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATCCAGTGACACGAGGCTaGGGGGAGCTTCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: TIRTQCSSSGQTSVERLDPVTRG*GELQGL
Trigger: CAGCCCTTGAAGCTCCCCCCAGCCTCGTGTCACTGG...ATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCCCACACAGCCCCTTGTaGATCTGGGCCAGGGTATTA +
Preference number: 4 (lower is better)
Translates to: LPVQTFRSPRYQDVMVGLPHSPL*IWARVL
Trigger: TAATACCCTGGCCCAGATCCACAAGGGGCTGTGTGG...GAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp AATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCCCACACAGCCCCTTGTaGATCTGGGCCAGGGTATTA +
Preference number: 4 (lower is better)
Translates to: NGRAHCSKTAQTTCSQEGPHSPL*IWARVL
Trigger: TAATACCCTGGCCCAGATCCACAAGGGGCTGTGTGG...GCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTTCTGCTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCCACACAGCCCCTTGTaGATCTGGGCCAGGGTATTA +
Preference number: 4 (lower is better)
Translates to: LLLLGLLPTIRTQCSSSGPHSPL*IWARVL
Trigger: TAATACCCTGGCCCAGATCCACAAGGGGCTGTGTGG...GCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTAAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATAATATGGCAGCCAGCTaGCCACACAGCCCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: LSHSSLPVQTFRSPRYQDNMAAS*PHSPLW
Trigger: CCACAAGGGGCTGTGTGGCCAGCTGGCTGCCATATT...ATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp AGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGATGCAGGTGGTACTCATaGCGCAGGGCCCATGCAGAG +
Preference number: 4 (lower is better)
Translates to: RTQCSSSGQTSVERLDTGCRWYS*RRAHAE
Trigger: CTCTGCATGGGCCCTGCGCCATGAGTACCACCTGCA...TCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGTGCAGGTGGTACTCATaGCGCAGGGCCCATGCAGAG +
Preference number: 4 (lower is better)
Translates to: LPLGHNVLRLARHLLKGWCRWYS*RRAHAE
Trigger: CTCTGCATGGGCCCTGCGCCATGAGTACCACCTGCA...CCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp ACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATGCCAGGTACTGCAGGTaGTACTCATGGCGCAGGGCC +
Preference number: 4 (lower is better)
Translates to: TIRTQCSSSGQTSVERLDARYCR*YSWRRA
Trigger: GGCCCTGCGCCATGAGTACCACCTGCAGTACCTGGC...ATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GGACAACGTACCCATCTTTCCATCTATATCAACTATCCTAGGTCTCTGATACCCAGCGCTGCCGCTTTCTaGGCCAGAGCGAGTGCCAGG +
Preference number: 4 (lower is better)
Translates to: GQRTHLSIYINYPRSLIPSAAAF*ARASAR
Trigger: CCTGGCACTCGCTCTGGCCCAGAAAGCGGCAGCGCT...GGGTATCAGAGACCTAGGATAGTTGATATAGATGGAAAGATGGGTACGTTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GTGGATAACGATCACATGAAACCAAATCATGAGGGCAGAGATCAGGTCCTAGACATGGGTGGCTGGCAGTaGCTGCAGCGCTGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: VDNDHMKPNHEGRDQVLDMGGWQ*LQRCRF
Trigger: AAAGCGGCAGCGCTGCAGCCACTGCCAGCCACCCAT...GTCTAGGACCTGATCTCTGCCCTCATGATTTGGTTTCATGTGATCGTTATCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CCA 90 bp CTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACACTTCCTAACGACAGCTaGTCAGAGAAGTCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LLGLLPTIRTQCSSSGQTLPNDS*SEKSAA
Trigger: GGCAGCCGACTTCTCTGACCAGCTGTCGTTAGGAAG...TGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR CCA 90 bp CAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATCACGGGGCACCAACGTaGGCGGAGCGCACCAGTAAC +
Preference number: 4 (lower is better)
Translates to: QTSVERLDTGQRTHLSIYHGAPT*AERTSN
Trigger: GTTACTGGTGCGCTCCGCCCACGTTGGTGCCCCGTG...ATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp GGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGCCAGTAGTTCTCCCTaGAGACTGAATCGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: GCNGRAHCSKTAQTTCSQASSSP*RLNRAC
Trigger: GCAGGCTCGATTCAGTCTTCAGGGAGAACTACTGGC...CTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp TCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCGGATGGCGGTTGCAATaGCCCCATCCACTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: SGQTSVERLDTGQRTHLSGWRLQ*PHPLCH
Trigger: ATGACAGAGTGGATGGGGTCATTGCAACCGCCATCC...GGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp TGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCGAGGAGAGTGAGCAGTaGGGCTATCCGCTGCATGGA +
Preference number: 4 (lower is better)
Translates to: CLPLGHNVLRLARHLLKGEESEQ*GYPLHG
Trigger: TCCATGCAGCGGATAGCCTCACTGCTCACTCTCCTC...GCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp CTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAATGCAGAGAAAGGTGTaGGGTGTGGGGCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: LQKPQISGCNGRAHCSKTMQRKV*GVGQPQ
Trigger: CTGGGGCTGCCCCACACCTCACACCTTTCTCTGCAT...TGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp TCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCGTCGGCAGTCCAGGTTaGGGTTTGGCAAGACTTGAG +
Preference number: 4 (lower is better)
Translates to: SGQTSVERLDTGQRTHLSVGSPG*GLARLE
Trigger: CTCAAGTCTTGCCAAACCTCAACCTGGACTGCCGAC...GGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR GCA 90 bp GCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTTCTTGCTGCTCCAGCTaGCTCCCCAGTACGACTCTC +
Preference number: 4 (lower is better)
Translates to: ARHLLKGWIQDNVPIFPSSCCSS*LPSTTL
Trigger: GAGAGTCGTACTGGGGAGGCAGCTGGAGCAGCAAGA...AGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp TGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTCTTGCTGCTCCAGCTaGCTCCCCAGTACGACTCTC +
Preference number: 4 (lower is better)
Translates to: CLPLGHNVLRLARHLLKGSCCSS*LPSTTL
Trigger: GAGAGTCGTACTGGGGAGGCAGCTGGAGCAGCAAGA...GCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp AGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGATCTTGCTGCTCCAGCTaGCTCCCCAGTACGACTCTC +
Preference number: 4 (lower is better)
Translates to: RTQCSSSGQTSVERLDTGSCCSS*LPSTTL
Trigger: GAGAGTCGTACTGGGGAGGCAGCTGGAGCAGCAAGA...TCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCTGGGGCTGCACCAGCTaGGAGAAACTGACTCTGGAA +
Preference number: 4 (lower is better)
Translates to: QDVMVGLTALKQLKQPAPWGCTS*EKLTLE
Trigger: TTCCAGAGTCAGTTTCTCGCAGCTGGTGCAGCCCCA...GGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp AAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTTGGGGCTGCACCAGCTaGGAGAAACTGACTCTGGAA +
Preference number: 4 (lower is better)
Translates to: KPLFTPSTDLQKPQISGCWGCTS*EKLTLE
Trigger: TTCCAGAGTCAGTTTCTCGCAGCTGGTGCAGCCCCA...ACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp GGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACCCTTTCTTCACCAACTaGACTGCTGGGGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: GHNVLRLARHLLKGWIQDPFFTN*TAGAAP
Trigger: TGGTGCAGCCCCAGCAGTGCAGTTGGTGAAGAAAGG...GTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACATGGGCCAGCAACCGCTaGTGTTCCTGCAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: LQKPQISGCNGRAHCSKTWASNR*CSCRIS
Trigger: GGAGATCCTGCAGGAACAGCAGCGGTTGCTGGCCCA...TGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp ACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAAGGTCCTCCTGGCCTCTaGTCCTCAGAGGCTGTCTCT +
Preference number: 4 (lower is better)
Translates to: TFRSPRYQDVMVGLTALKGPPGL*SSEAVS
Trigger: AGAGACAGCCTCTGAGGAGCAGAGGCCAGGAGGACC...TTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACAAGACTGAATCGAGCCTaGATCCTCTCCTGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: LLGLLPTIRTQCSSSGQTRLNRA*ILSCVC
Trigger: GCAGACACAGGAGAGGATGCAGGCTCGATTCAGTCT...TGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp TCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGCTGGGAAACCTGGCTaGGGGTCAGGTGGAACAGCT +
Preference number: 4 (lower is better)
Translates to: SSLPVQTFRSPRYQDVMVAGKPG*GSGGTA
Trigger: AGCTGTTCCACCTGACCCGCAGCCAGGTTTCCCAGC...TACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGGAGGCTTAAGACACTaGCTGCTAGCCGGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: PTIRTQCSSSGQTSVERLGGLRH*LLAGPQ
Trigger: TTGGGGACCGGCTAGCAGGCAGTGTCTTAAGCCTCC...CAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp GCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTGGAGGCTTAAGACACTaGCTGCTAGCCGGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: ARHLLKGWIQDNVPIFPSGGLRH*LLAGPQ
Trigger: TTGGGGACCGGCTAGCAGGCAGTGTCTTAAGCCTCC...AGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp TCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCAGCACGGATGGCGGTTaGAATGACCCCATCCACTCT +
Preference number: 4 (lower is better)
Translates to: SGQTSVERLDTGQRTHLSSTDGG*NDPIHS
Trigger: AGAGTGGATGGGGTCATTGCAACCGCCATCCGTGCT...GGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACGGTACCAAGAGAAGGTaGTGTCGAGGAGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: PSTDLQKPQISGCNGRAHGTKRR*CRGAPH
Trigger: ATGAGGAGCTCCTCGACAGCACCTTCTCTTGGTACC...GTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp ATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCGCTGATTCCAGGGAATaGCGGGCCAGGCGGATGAGC +
Preference number: 4 (lower is better)
Translates to: ISGCNGRAHCSKTAQTTCADSRE*RARRMS
Trigger: GCTCATCCGCCTGGCCCGGCATTCCCTGGAATCAGC...GCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp AGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTTCCCGCGGCACCACCTaGAAGGCCCGCATCAGCACT +
Preference number: 4 (lower is better)
Translates to: RYQDVMVGLTALKQLKQPSRGTT*KARIST
Trigger: AGTGCTGATGCGGGCCTTGCAGGTGGTGCCGCGGGA...AGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp TCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCTTTCAGCAGGGGTACTaGCGGCTGCCAGGGTTAGCT +
Preference number: 4 (lower is better)
Translates to: SGCNGRAHCSKTAQTTCSFQQGY*RLPGLA
Trigger: AGCTAACCCTGGCAGCCGGCAGTACCCCTGCTGAAA...GGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp GACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAATGGCGCAGGGCCCATaGAGAGAAAGGTGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: DLQKPQISGCNGRAHCSKMAQGP*RERCEV
Trigger: CACCTCACACCTTTCTCTGCATGGGCCCTGCGCCAT...TTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp GGACAACGTACCCATCTTTCCATCTATATCAACTATCCTAGGTCTCTGATACCCGGTAGCAGTTGCGGATaGTGGGGAGGTCCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GQRTHLSIYINYPRSLIPGSSCG*WGGPGR
Trigger: CCTGCCAGGACCTCCCCAGCATCCGCAACTGCTACC...GGGTATCAGAGACCTAGGATAGTTGATATAGATGGAAAGATGGGTACGTTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR GCA 90 bp AGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGAGAGTCAGGTAGCAGTTaGGGATGCTGGGGAGGTCCT +
Preference number: 4 (lower is better)
Translates to: RTQCSSSGQTSVERLDTGESGSS*GCWGGP
Trigger: AGGACCTCCCCAGCATCCGCAACTGCTACCTGACTC...TCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR GCA 90 bp ATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCAGGGCTGCCACCAGATaGTGTACTGGGGACTCCCGG +
Preference number: 4 (lower is better)
Translates to: ISGCNGRAHCSKTAQTTCRAATR*CTGDSR
Trigger: CCGGGAGTCCCCAGTACAGCATCTGGTGGCAGCCCT...GCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR GCA 90 bp CTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCAGCAGCCATGTTTTCTaGAGCATACTCCTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: LRLARHLLKGWIQDNVPISSHVF*SILLRA
Trigger: TGCCCGCAGGAGTATGCTGCAGAAAACATGGCTGCT...GATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp ACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTGGAAGGCAAGCCTTCTaGTCCTTGGTCTCCTGCCTA +
Preference number: 4 (lower is better)
Translates to: TDLQKPQISGCNGRAHCSGRQAF*SLVSCL
Trigger: TAGGCAGGAGACCAAGGAGCAGAAGGCTTGCCTTCC...AGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACAGGGATGCATTTAGTTTaGCCTGTCCCCAAAGAGCGG +
Preference number: 4 (lower is better)
Translates to: LLGLLPTIRTQCSSSGQTGMHLV*PVPKER
Trigger: CCGCTCTTTGGGGACAGGGCAAACTAAATGCATCCC...TGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCACTATAGCATTCATATaGCTCAGCCCAGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: LRLARHLLKGWIQDNVPITIAFI*LSPGQG
Trigger: CCCCTGCCCTGGGCTGAGGCATATGAATGCTATAGT...GATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCAGGAAAGCAACACCACTaGGCACAGGCAGATTCACGG +
Preference number: 4 (lower is better)
Translates to: LARHLLKGWIQDNVPIFPGKQHH*AQADSR
Trigger: CCGTGAATCTGCCTGTGCCCAGTGGTGTTGCTTTCC...TGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGGAAAGCAACACCACTaGGCACAGGCAGATTCACGG +
Preference number: 4 (lower is better)
Translates to: GCNGRAHCSKTAQTTCSQGKQHH*AQADSR
Trigger: CCGTGAATCTGCCTGTGCCCAGTGGTGTTGCTTTCC...CTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATATCAACTATGGTCACGGCACCCTCTaGTGGGCCCACGTTGGGCAC +
Preference number: 4 (lower is better)
Translates to: VERLDTGQRTHLSIYINYGHGTL*WAHVGH
Trigger: GTGCCCAACGTGGGCCCACCAGAGGGTGCCGTGACC...ATAGTTGATATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp ACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAAGGAAGCTGGCAGCCCTaGTTCCTAGGAGTGGGTGTC +
Preference number: 4 (lower is better)
Translates to: TFRSPRYQDVMVGLTALKGSWQP*FLGVGV
Trigger: GACACCCACTCCTAGGAACCAGGGCTGCCAGCTTCC...TTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp TCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAAAGCTGGGGTCAAGCTaGGCCAGCAACCGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SSLPVQTFRSPRYQDVMVKLGSS*ASNRCC
Trigger: ACAGCAGCGGTTGCTGGCCCAGCTTGACCCCAGCTT...TACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGCAGAGCTGGGGCTTCTaGCTCCAGCTTGTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: GCNGRAHCSKTAQTTCSQQSWGF*LQLVSL
Trigger: AAGAGAGACAAGCTGGAGCCAGAAGCCCCAGCTCTG...CTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp ACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATGGGCAATGCCAGAGCTaGGGCTTCTGGCTCCAGCTT +
Preference number: 4 (lower is better)
Translates to: TIRTQCSSSGQTSVERLDGQCQS*GFWLQL
Trigger: AAGCTGGAGCCAGAAGCCCCAGCTCTGGCATTGCCC...ATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTAAGTCCTGGGTCCAGTaGAGCTTCTCCAGCTCGACA +
Preference number: 4 (lower is better)
Translates to: PVQTFRSPRYQDVMVGLTKSWVQ*SFSSST
Trigger: TGTCGAGCTGGAGAAGCTCCACTGGACCCAGGACTT...AGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATTGGTGCAGACCCAGGTaGGTGGGCAGGTCCACGTCA +
Preference number: 4 (lower is better)
Translates to: QTSVERLDTGQRTHLSIYWCRPR*VGRSTS
Trigger: TGACGTGGACCTGCCCACCCACCTGGGTCTGCACCA...ATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp ACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATCTCTGCTGGGAAACCTaGCTGCGGGTCAGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: TIRTQCSSSGQTSVERLDLCWET*LRVRWN
Trigger: GTTCCACCTGACCCGCAGCCAGGTTTCCCAGCAGAG...ATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp TCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTACCAAACTCACCAGCCTaGGCCCTGCTGATGACCTGG +
Preference number: 4 (lower is better)
Translates to: SSLPVQTFRSPRYQDVMVPNSPA*ALLMTW
Trigger: CCAGGTCATCAGCAGGGCCCAGGCTGGTGAGTTTGG...TACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGACCACCGCAGGTCCTaGGTATGTCACCTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: LQKPQISGCNGRAHCSKTDHRRS*VCHLQH
Trigger: GTGCTGGAGGTGACATACCCAGGACCTGCGGTGGTC...TGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp TCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGGGCAAGGCCAGTTCTTaGGGAGCCTCAGCTATGATG +
Preference number: 4 (lower is better)
Translates to: SLPVQTFRSPRYQDVMVGGKASS*GASAMM
Trigger: CATCATAGCTGAGGCTCCCCAAGAACTGGCCTTGCC...CCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp TCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCGCTGCCAGGGTTAGCTaGGTGAGGAGAGTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: SGCNGRAHCSKTAQTTCSAARVS*VRRVSS
Trigger: ACTGCTCACTCTCCTCACCCAGCTAACCCTGGCAGC...GGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp TCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAACAGGCTGCCCAGTGTaGGCTGACTCAGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: SSLPVQTFRSPRYQDVMVTGCPV*ADSAVA
Trigger: TGCCACTGCTGAGTCAGCCCACACTGGGCAGCCTGT...TACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGAATATGGCAGCCAGCTaGCCACACAGCCCCTTGTGG +
Preference number: 4 (lower is better)
Translates to: PTIRTQCSSSGQTSVERLNMAAS*PHSPLW
Trigger: CCACAAGGGGCTGTGTGGCCAGCTGGCTGCCATATT...CAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATATCAACTATGGCAGCATGGGTGGCTaGCAGTGGCTGCAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: VERLDTGQRTHLSIYINYGSMGG*QWLQRC
Trigger: GCAGCGCTGCAGCCACTGCCAGCCACCCATGCTGCC...ATAGTTGATATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTCAGACTGGCTCGGGCTaGCGAGCAATGAGTCAGGTA +
Preference number: 4 (lower is better)
Translates to: ARHLLKGWIQDNVPIFPSQTGSG*RAMSQV
Trigger: TACCTGACTCATTGCTCGCCAGCCCGAGCCAGTCTG...AGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR CCA 90 bp GACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAACAGACTGGCTCGGGCTaGCGAGCAATGAGTCAGGTA +
Preference number: 4 (lower is better)
Translates to: DLQKPQISGCNGRAHCSKQTGSG*RAMSQV
Trigger: TACCTGACTCATTGCTCGCCAGCCCGAGCCAGTCTG...TTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR CCA 90 bp TCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAACTGCAGGACCCGCATaGCTGTGCCCATGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: SCLPLGHNVLRLARHLLKTAGPA*LCPWCL
Trigger: CAGACACCATGGGCACAGCCATGCGGGTCCTGCAGT...TTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR CCA 90 bp CAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATACAGCCCAGAGAGCCTaGGGGCGCCAGCTCTCCAAA +
Preference number: 4 (lower is better)
Translates to: QTSVERLDTGQRTHLSIYTAQRA*GRQLSK
Trigger: TTTGGAGAGCTGGCGCCCCCAGGCTCTCTGGGCTGT...ATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR CCA 90 bp GCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTAGGGACACAGGCAACTaGGTCAGAGGCAGGCTCAGA +
Preference number: 4 (lower is better)
Translates to: ARHLLKGWIQDNVPIFPSRDTGN*VRGRLR
Trigger: TCTGAGCCTGCCTCTGACCCAGTTGCCTGTGTCCCT...AGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304330.9
CDS-3UTR CCA 90 bp GGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACGAGCTCAAAGCCCTCTaGGAGCGTGGAATTGGGAAG +
Preference number: 4 (lower is better)
Translates to: GHNVLRLARHLLKGWIQDELKAL*ERGIGK
Trigger: CTTCCCAATTCCACGCTCCCAGAGGGCTTTGAGCTC...GTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTACCTCTTCCCCAGCTaGCCCAGAGGCAGCTCAATT +
Preference number: 4 (lower is better)
Translates to: GQTSVERLDTGQRTHLSIYLFPS*PRGSSI
Trigger: AATTGAGCTGCCTCTGGGCCAGCTGGGGAAGAGGTA...GATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR TCA 90 bp CTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACACACAACTTCCCCAACTaGTGGGCCCTTGGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: LQKPQISGCNGRAHCSKTHNFPN*WALGFS
Trigger: GCTGAAGCCAAGGGCCCATCAGTTGGGGAAGTTGTG...TGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp TCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCCTCACTGGCAAAAGCTaGCATGAGGGGTTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SGQTSVERLDTGQRTHLSLTGKS*HEGFLL
Trigger: AAGGAGGAACCCCTCATGTCAGCTTTTGCCAGTGAG...GGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp GGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACGTTCTCCCTGAAGACTaGATCGAGCCTGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: GHNVLRLARHLLKGWIQDVLPED*IEPASS
Trigger: AGAGGATGCAGGCTCGATTCAGTCTTCAGGGAGAAC...GTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp GGACAACGTACCCATCTTTCCATCTATATCAACTATCCTAGGTCTCTGATACCCATGCAGAGAAAGGTGTaGGGTGTGGGGCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GQRTHLSIYINYPRSLIPMQRKV*GVGQPQ
Trigger: CTGGGGCTGCCCCACACCTCACACCTTTCTCTGCAT...GGGTATCAGAGACCTAGGATAGTTGATATAGATGGAAAGATGGGTACGTTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp ATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCGCAGCAGCTCATGGGTaGGGTACTCACTTCCGGGCA +
Preference number: 4 (lower is better)
Translates to: ISGCNGRAHCSKTAQTTCAAAHG*GTHFRA
Trigger: TGCCCGGAAGTGAGTACCTCACCCATGAGCTGCTGC...GCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp AGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACCTTTCTTCACCAACTaGACTGCTGGGGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: RTQCSSSGQTSVERLDTGPFFTN*TAGAAP
Trigger: TGGTGCAGCCCCAGCAGTGCAGTTGGTGAAGAAAGG...TCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATCCTGAAAGCTGTGGCTaGTCCCAGGAAGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: QTSVERLDTGQRTHLSIYPESCG*SQEAGS
Trigger: GCTGCCAGCTTCCTGGGAGCAGCCACAGCTTTCAGG...ATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp ACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAAATACCCCGCTCTCTCTaGCTCCTCTCCATGGTGGTG +
Preference number: 4 (lower is better)
Translates to: TFRSPRYQDVMVGLTALKIPRSL*LLSMVV
Trigger: CACCACCATGGAGAGGAGGCAGAGAGAGCGGGGTAT...TTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp TGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCCACATGCAGTGCCAGTaGTCTCTGCTGGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: CLPLGHNVLRLARHLLKGHMQCQ*SLLGNL
Trigger: CAGGTTTCCCAGCAGAGAGCACTGGCACTGCATGTG...GCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp GACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAAGCACGGATGGCGGTTaGAATGACCCCATCCACTCT +
Preference number: 4 (lower is better)
Translates to: DLQKPQISGCNGRAHCSKSTDGG*NDPIHS
Trigger: AGAGTGGATGGGGTCATTGCAACCGCCATCCGTGCT...TTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp GGACAACGTACCCATCTTTCCATCTATATCAACTATCCTAGGTCTCTGATACCCACTAGGGGTAGGCCCTaGCCCCACAGGAGACCAACT +
Preference number: 4 (lower is better)
Translates to: GQRTHLSIYINYPRSLIPTRGRP*PHRRPT
Trigger: AGTTGGTCTCCTGTGGGGGCAGGGCCTACCCCTAGT...GGGTATCAGAGACCTAGGATAGTTGATATAGATGGAAAGATGGGTACGTTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATGACGGAGGGCCTCGGTaGTCAGCATCTCAGCTTCCT +
Preference number: 4 (lower is better)
Translates to: QTSVERLDTGQRTHLSIYDGGPR*SASQLP
Trigger: AGGAAGCTGAGATGCTGAGCACCGAGGCCCTCCGTC...ATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp ATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCCTGGGCCAGAGCGAGTaGCAGGTACTGCAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: ISGCNGRAHCSKTAQTTCLGQSE*QVLQVV
Trigger: TACCACCTGCAGTACCTGGCACTCGCTCTGGCCCAG...GCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp TCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAACCGAGGGACCCTGCTaGTTCCTAACGACAGCTGGT +
Preference number: 4 (lower is better)
Translates to: SSLPVQTFRSPRYQDVMVTEGPC*FLTTAG
Trigger: ACCAGCTGTCGTTAGGAAGCAGCAGGGTCCCTCGGT...TACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR GCA 90 bp CTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCAACAGCTCAAACAACCTaGTCCCAGGAAGGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: LARHLLKGWIQDNVPIFPTAQTT*SQEGKP
Trigger: AGGCTTGCCTTCCTGGGAGCAGGTTGTTTGAGCTGT...TGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCGGGATGCATTTAGTTTaGCCTGTCCCCAAAGAGCGG +
Preference number: 4 (lower is better)
Translates to: QDVMVGLTALKQLKQPAPGMHLV*PVPKER
Trigger: CCGCTCTTTGGGGACAGGGCAAACTAAATGCATCCC...GGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp TCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTACCCAACCTACAGTaGCTGGGTCAATCCCCACTT +
Preference number: 4 (lower is better)
Translates to: SLPVQTFRSPRYQDVMVGLPNLQ*LGQSPL
Trigger: AAGTGGGGATTGACCCAGGCACTGTAGGTTGGGTAG...CCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR GCA 90 bp CTAAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATACCCACCACTGGCCTTaGTTGACACTTACCTCTTCC +
Preference number: 4 (lower is better)
Translates to: LSHSSLPVQTFRSPRYQDTHHWP*LTLTSS
Trigger: GGAAGAGGTAAGTGTCAAGCAAGGCCAGTGGTGGGT...ATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CCA 90 bp AGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATATCAACTATCCTAGGGAGGCCGGTCTGAGTTaGCATCACCACCGCCCCTAT +
Preference number: 4 (lower is better)
Translates to: RLDTGQRTHLSIYINYPREAGLS*HHHRPY
Trigger: ATAGGGGCGGTGGTGATGCCAACTCAGACCGGCCTC...CCTAGGATAGTTGATATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp AGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTACATCCCGATGGTCCTaGAGCGGAGGCCGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: RYQDVMVGLTALKQLKQPTSRWS*SGGRSE
Trigger: CTCAGACCGGCCTCCGCTCCAGGACCATCGGGATGT...AGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTCAACTGATGGGCCCTTaGCTTCAGCTATCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PVQTFRSPRYQDVMVGLTQLMGP*LQLSSL
Trigger: CAAGGAGGATAGCTGAAGCCAAGGGCCCATCAGTTG...AGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GTGCCTGGGTCAATCCCCACTTCTTCCACAAAGCCCAATTTGATCTTTCCCTTCCAACTGATGGGCCCTTaGCTTCAGCTATCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: VPGSIPTSSTKPNLIFPFQLMGP*LQLSSL
Trigger: CAAGGAGGATAGCTGAAGCCAAGGGCCCATCAGTTG...GAAGGGAAAGATCAAATTGGGCTTTGTGGAAGAAGTGGGGATTGACCCAGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CCA 90 bp TTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTCTCCTCAGGAGCCATaGCCTGCAGTCTTGCTATGT +
Preference number: 4 (lower is better)
Translates to: LVSCLPLGHNVLRLARHLSPQEP*PAVLLC
Trigger: ACATAGCAAGACTGCAGGCCATGGCTCCTGAGGAGA...CAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp TCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGTCTCCTCAGGAGCCATaGCCTGCAGTCTTGCTATGT +
Preference number: 4 (lower is better)
Translates to: SLPVQTFRSPRYQDVMVGSPQEP*PAVLLC
Trigger: ACATAGCAAGACTGCAGGCCATGGCTCCTGAGGAGA...CCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp AAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTTCTCCTCAGGAGCCATaGCCTGCAGTCTTGCTATGT +
Preference number: 4 (lower is better)
Translates to: KPLFTPSTDLQKPQISGCSPQEP*PAVLLC
Trigger: ACATAGCAAGACTGCAGGCCATGGCTCCTGAGGAGA...ACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGCAGAGCTGGGGCTTCTaGCTCCAGCTTGTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: PTIRTQCSSSGQTSVERLQSWGF*LQLVSL
Trigger: AAGAGAGACAAGCTGGAGCCAGAAGCCCCAGCTCTG...CAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGAAGTCCTGGGTCCAGTaGAGCTTCTCCAGCTCGACA +
Preference number: 4 (lower is better)
Translates to: LPLGHNVLRLARHLLKGWKSWVQ*SFSSST
Trigger: TGTCGAGCTGGAGAAGCTCCACTGGACCCAGGACTT...CCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GTGGATAACGATCACATGAAACCAAATCATGAGGGCAGAGATCAGGTCCTAGACTCCTCCTTGTCCTCCTaGCTGGGCATCAGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: VDNDHMKPNHEGRDQVLDSSLSS*LGIRGN
Trigger: GTTCCCTCTGATGCCCAGCCAGGAGGACAAGGAGGA...GTCTAGGACCTGATCTCTGCCCTCATGATTTGGTTTCATGTGATCGTTATCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CCA 90 bp CTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGACTCCAGGACCCTTGTaGCTGATTCCAGGGAATGCC +
Preference number: 4 (lower is better)
Translates to: LPLGHNVLRLARHLLKGWTPGPL*LIPGNA
Trigger: GGCATTCCCTGGAATCAGCCACAAGGGTCCTGGAGT...CCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GCTAAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGACAGGAGACCAACTGGTaGGCAAGAACTCTCGAACTA +
Preference number: 4 (lower is better)
Translates to: AKPLFTPSTDLQKPQISGQETNW*ARTLEL
Trigger: TAGTTCGAGAGTTCTTGCCCACCAGTTGGTCTCCTG...TCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGCCACAGGAGACCAACTaGTGGGCAAGAACTCTCGAA +
Preference number: 4 (lower is better)
Translates to: GCNGRAHCSKTAQTTCSQPQETN*WARTLE
Trigger: TTCGAGAGTTCTTGCCCACCAGTTGGTCTCCTGTGG...CTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp ACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATAGGCTATCCGCTGCATaGACAGGGGTTGAGGTGGGT +
Preference number: 4 (lower is better)
Translates to: TIRTQCSSSGQTSVERLDRLSAA*TGVEVG
Trigger: ACCCACCTCAACCCCTGTCCATGCAGCGGATAGCCT...ATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGCTCAGCAGCAGCTCATaGGTGAGGTACTCACTTCCG +
Preference number: 4 (lower is better)
Translates to: PTIRTQCSSSGQTSVERLLSSSS*VRYSLP
Trigger: CGGAAGTGAGTACCTCACCCATGAGCTGCTGCTGAG...CAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGCTTCCTAACGACAGCTaGTCAGAGAAGTCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LPLGHNVLRLARHLLKGWLPNDS*SEKSAA
Trigger: GGCAGCCGACTTCTCTGACCAGCTGTCGTTAGGAAG...CCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR CCA 90 bp ACATTTATTTTAATGCACAACTATAGCATTCATATGCCTCAGCCCAGGGCAGGGTGCCCATGGTGTCTGTaGGAGAGAGTCCCGAGGGGG +
Preference number: 4 (lower is better)
Translates to: TFILMHNYSIHMPQPRAGCPWCL*ERVPRG
Trigger: CCCCCTCGGGACTCTCTCCCACAGACACCATGGGCA...CCCTGCCCTGGGCTGAGGCATATGAATGCTATAGTTGTGCATTAAAATAAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR CCA 90 bp ACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATGCATGGCTGTGCCCATaGTGTCTGTGGGAGAGAGTC +
Preference number: 4 (lower is better)
Translates to: TIRTQCSSSGQTSVERLDAWLCP*CLWERV
Trigger: GACTCTCTCCCACAGACACCATGGGCACAGCCATGC...ATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR CCA 90 bp ATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCACTGGGAGCGTGGAATTaGGAAGCTTATAGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: MVGLTALKQLKQPAPRKALGAWN*EAYSAG
Trigger: TCCTGCACTATAAGCTTCCCAATTCCACGCTCCCAG...TGCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTGAGCTCAAAGCCCTCTaGGAGCGTGGAATTGGGAAG +
Preference number: 4 (lower is better)
Translates to: ARHLLKGWIQDNVPIFPSELKAL*ERGIGK
Trigger: CTTCCCAATTCCACGCTCCCAGAGGGCTTTGAGCTC...AGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GTGGATAACGATCACATGAAACCAAATCATGAGGGCAGAGATCAGGTCCTAGACCCTTGCAGGTCCTGCTaGGCTGAGAAAGTACCTGGG +
Preference number: 4 (lower is better)
Translates to: VDNDHMKPNHEGRDQVLDPCRSC*AEKVPG
Trigger: CCCAGGTACTTTCTCAGCCCAGCAGGACCTGCAAGG...GTCTAGGACCTGATCTCTGCCCTCATGATTTGGTTTCATGTGATCGTTATCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR TCA 90 bp CAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATCCAGCTGCGAGAAACTaGCTCTGGAAGTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QTSVERLDTGQRTHLSIYPAARN*LWKCSR
Trigger: CCTGCTGCACTTCCAGAGTCAGTTTCTCGCAGCTGG...ATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp TCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAACAGCAGTGATGTGCTaGTCATGCCTCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SCLPLGHNVLRLARHLLKTAVMC*SCLLSL
Trigger: GAGGCTGAGGAGGCATGATCAGCACATCACTGCTGT...TTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp TCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCTTACCAGATGTTGCTaGTTTCCCCTGTGTGTCCCG +
Preference number: 4 (lower is better)
Translates to: SGCNGRAHCSKTAQTTCSLTRCC*FPLCVP
Trigger: CGGGACACACAGGGGAAATCAGCAACATCTGGTAAG...GGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp ATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCACCAGATTGGGTCCCTaGAAGCTGTGGCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: ISGCNGRAHCSKTAQTTCTRLGP*KLWLLP
Trigger: TGGGAGCAGCCACAGCTTTCAGGGACCCAATCTGGT...GCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp CTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTTGCGTGTGGCTGTaGGATCTCAAGAAAGCAACC +
Preference number: 4 (lower is better)
Translates to: LARHLLKGWIQDNVPIFPSCVWL*DLKKAT
Trigger: GGTTGCTTTCTTGAGATCTCACAGCCACACGCAAGA...TGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp GACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAACTCACTGGCAAAAGCTaGCATGAGGGGTTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: DLQKPQISGCNGRAHCSKLTGKS*HEGFLL
Trigger: AAGGAGGAACCCCTCATGTCAGCTTTTGCCAGTGAG...TTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp TTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGTTCTCCCTGAAGACTaGATCGAGCCTGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: FTPSTDLQKPQISGCNGRVLPED*IEPASS
Trigger: AGAGGATGCAGGCTCGATTCAGTCTTCAGGGAGAAC...CCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp TCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGCCAGTAGTTCTCCCTaGAGACTGAATCGAGCCTGC +
Preference number: 4 (lower is better)
Translates to: SSLPVQTFRSPRYQDVMVASSSP*RLNRAC
Trigger: GCAGGCTCGATTCAGTCTTCAGGGAGAACTACTGGC...TACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp GTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATATCAACTATCAGGACCCTTGTGGCTaGTTCCAGGGAATGCCGGGC +
Preference number: 4 (lower is better)
Translates to: VERLDTGQRTHLSIYINYQDPCG*FQGMPG
Trigger: GCCCGGCATTCCCTGGAATCAGCCACAAGGGTCCTG...ATAGTTGATATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp CAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCGAGCTCTGTGGGTCCTaGGAGAAGATGAAGCTATTG +
Preference number: 4 (lower is better)
Translates to: QDVMVGLTALKQLKQPAPELCGS*EKMKLL
Trigger: CAATAGCTTCATCTTCTCTCAGGACCCACAGAGCTC...GGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp CTAAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGAGCTCTGTGGGTCCTaGGAGAAGATGAAGCTATTG +
Preference number: 4 (lower is better)
Translates to: LSHSSLPVQTFRSPRYQDELCGS*EKMKLL
Trigger: CAATAGCTTCATCTTCTCTCAGGACCCACAGAGCTC...ATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp AATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCACTATCCTAGGTCTCTaGTACCCCATTTTGGAGCAC +
Preference number: 4 (lower is better)
Translates to: NGRAHCSKTAQTTCSQEGTILGL*YPILEH
Trigger: GTGCTCCAAAATGGGGTATCAGAGACCTAGGATAGT...GCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp GGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACGGAGATGTAACTTACTaGGCTCTGTGGGTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: GHNVLRLARHLLKGWIQDGDVTY*ALWVLR
Trigger: TCTCAGGACCCACAGAGCTCAGTAAGTTACATCTCC...GTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR TCA 90 bp CTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACATCCTGCGGGCAGCTTTaGCCTCATCCTAGAAGCAGA +
Preference number: 4 (lower is better)
Translates to: LQKPQISGCNGRAHCSKTSCGQL*PHPRSR
Trigger: TCTGCTTCTAGGATGAGGTCAAAGCTGCCCGCAGGA...TGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR GCA 90 bp AGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTCTGCACTGCTGGGGCTaGACCAGCTGCGAGAAACTG +
Preference number: 4 (lower is better)
Translates to: RYQDVMVGLTALKQLKQPLHCWG*TSCEKL
Trigger: CAGTTTCTCGCAGCTGGTGCAGCCCCAGCAGTGCAG...AGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp GTGGATAACGATCACATGAAACCAAATCATGAGGGCAGAGATCAGGTCCTAGACCCTTTCTTCACCAACTaGACTGCTGGGGCTGCACCA +
Preference number: 4 (lower is better)
Translates to: VDNDHMKPNHEGRDQVLDPFFTN*TAGAAP
Trigger: TGGTGCAGCCCCAGCAGTGCAGTTGGTGAAGAAAGG...GTCTAGGACCTGATCTCTGCCCTCATGATTTGGTTTCATGTGATCGTTATCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR GCA 90 bp TCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCTCAGGAGCCATGGCCTaGAGTCTTGCTATGTTCTCT +
Preference number: 4 (lower is better)
Translates to: SGQTSVERLDTGQRTHLSSGAMA*SLAMFS
Trigger: AGAGAACATAGCAAGACTGCAGGCCATGGCTCCTGA...GGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp GGACAACGTACCCATCTTTCCATCTATATCAACTATCCTAGGTCTCTGATACCCAACCGCTGCTGTTCCTaGAGGATCTCCTCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GQRTHLSIYINYPRSLIPNRCCS*RISSGA
Trigger: GGCTCCTGAGGAGATCCTGCAGGAACAGCAGCGGTT...GGGTATCAGAGACCTAGGATAGTTGATATAGATGGAAAGATGGGTACGTTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp TGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCAGACTGAATCGAGCCTaGATCCTCTCCTGTGTCTGC +
Preference number: 4 (lower is better)
Translates to: CLPLGHNVLRLARHLLKGRLNRA*ILSCVC
Trigger: GCAGACACAGGAGAGGATGCAGGCTCGATTCAGTCT...GCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp ACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACACATGCAGTGCCAGTaGTCTCTGCTGGGAAACCTG +
Preference number: 4 (lower is better)
Translates to: TFRSPRYQDVMVGLTALKHMQCQ*SLLGNL
Trigger: CAGGTTTCCCAGCAGAGAGCACTGGCACTGCATGTG...TTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp TCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCGGTACCAAGAGAAGGTaGTGTCGAGGAGCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: SGCNGRAHCSKTAQTTCSGTKRR*CRGAPH
Trigger: ATGAGGAGCTCCTCGACAGCACCTTCTCTTGGTACC...GGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp AGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATATCAACTATCCTAGGTTTCAGCAGGGGTACTaGCGGCTGCCAGGGTTAGCT +
Preference number: 4 (lower is better)
Translates to: RLDTGQRTHLSIYINYPRFQQGY*RLPGLA
Trigger: AGCTAACCCTGGCAGCCGGCAGTACCCCTGCTGAAA...CCTAGGATAGTTGATATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGAGCAGCCATGTTTTCTaGAGCATACTCCTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: PTIRTQCSSSGQTSVERLSSHVF*SILLRA
Trigger: TGCCCGCAGGAGTATGCTGCAGAAAACATGGCTGCT...CAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAATACCCTTGCAGGTCCTaGTGGGCTGAGAAAGTACCT +
Preference number: 4 (lower is better)
Translates to: LLPTIRTQCSSSGQTSVEYPCRS*WAEKVP
Trigger: AGGTACTTTCTCAGCCCAGCAGGACCTGCAAGGGTA...TTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CCA 90 bp ACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAGCAGTGTCTCCGTGTaGGGGTTCCCTCTTATTCAT +
Preference number: 4 (lower is better)
Translates to: TDLQKPQISGCNGRAHCSSSVSV*GFPLIH
Trigger: ATGAATAAGAGGGAACCCCCACACGGAGACACTGCT...AGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGAAGGGACCAAAGCTaGGGGCAAATCTGGGAGATT +
Preference number: 4 (lower is better)
Translates to: QDVMVGLTALKQLKQPAPRRDQS*GQIWEI
Trigger: AATCTCCCAGATTTGCCCCCAGCTTTGGTCCCTTCT...GGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GGACAACGTACCCATCTTTCCATCTATATCAACTATCCTAGGTCTCTGATACCCCCTCAGCCTCTCTTCTaGGTCCTCATCCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: GQRTHLSIYINYPRSLIPPQPLF*VLILRQ
Trigger: CTGCCTGAGGATGAGGACCCAGAAGAGAGGCTGAGG...GGGTATCAGAGACCTAGGATAGTTGATATAGATGGAAAGATGGGTACGTTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp ACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAAGGAAAGCAACACCACTaGGCACAGGCAGATTCACGG +
Preference number: 4 (lower is better)
Translates to: TFRSPRYQDVMVGLTALKGKQHH*AQADSR
Trigger: CCGTGAATCTGCCTGTGCCCAGTGGTGTTGCTTTCC...TTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp AGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTCTGGTGGGCCCACGTTaGGCACAACTTCCCCAACTG +
Preference number: 4 (lower is better)
Translates to: RYQDVMVGLTALKQLKQPLVGPR*AQLPQL
Trigger: CAGTTGGGGAAGTTGTGCCCAACGTGGGCCCACCAG...AGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp ACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATCAGAGCTGGGGCTTCTaGCTCCAGCTTGTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: TIRTQCSSSGQTSVERLDQSWGF*LQLVSL
Trigger: AAGAGAGACAAGCTGGAGCCAGAAGCCCCAGCTCTG...ATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATTGGCTGCGGGTCAGGTaGAACAGCTCCTGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: QTSVERLDTGQRTHLSIYWLRVR*NSSCRE
Trigger: TTCCCTACAGGAGCTGTTCCACCTGACCCGCAGCCA...ATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp AGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATATCAACTATCCTAGGCCTTGTCCTCCTGGCTaGGCATCAGAGGGAACGTCA +
Preference number: 4 (lower is better)
Translates to: RLDTGQRTHLSIYINYPRPCPPG*ASEGTS
Trigger: TGACGTTCCCTCTGATGCCCAGCCAGGAGGACAAGG...CCTAGGATAGTTGATATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp TCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAACTCCAGGACCCTTGTaGCTGATTCCAGGGAATGCC +
Preference number: 4 (lower is better)
Translates to: SCLPLGHNVLRLARHLLKTPGPL*LIPGNA
Trigger: GGCATTCCCTGGAATCAGCCACAAGGGTCCTGGAGT...TTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp ACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAAACTCCAGGACCCTTGTaGCTGATTCCAGGGAATGCC +
Preference number: 4 (lower is better)
Translates to: TFRSPRYQDVMVGLTALKTPGPL*LIPGNA
Trigger: GGCATTCCCTGGAATCAGCCACAAGGGTCCTGGAGT...TTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTCAGGAGACCAACTGGTaGGCAAGAACTCTCGAACTA +
Preference number: 4 (lower is better)
Translates to: GLLPTIRTQCSSSGQTSVQETNW*ARTLEL
Trigger: TAGTTCGAGAGTTCTTGCCCACCAGTTGGTCTCCTG...AACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp AGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACCACAGGAGACCAACTaGTGGGCAAGAACTCTCGAA +
Preference number: 4 (lower is better)
Translates to: RTQCSSSGQTSVERLDTGPQETN*WARTLE
Trigger: TTCGAGAGTTCTTGCCCACCAGTTGGTCTCCTGTGG...TCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp ATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCGGCCCGCATCAGCACTaGGTAGAGCTCCCTGTAAAG +
Preference number: 4 (lower is better)
Translates to: ISGCNGRAHCSKTAQTTCGPHQH*VELPVK
Trigger: CTTTACAGGGAGCTCTACCCAGTGCTGATGCGGGCC...GCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATGCTGCCAGGGTTAGCTaGGTGAGGAGAGTGAGCAGT +
Preference number: 4 (lower is better)
Translates to: QTSVERLDTGQRTHLSIYAARVS*VRRVSS
Trigger: ACTGCTCACTCTCCTCACCCAGCTAACCCTGGCAGC...ATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp ACATTTATTTTAATGCACAACTATAGCATTCATATGCCTCAGCCCAGGGCAGGGGGGAGCTTCAAGGGCTaGCACACAGGACAGCGGGTT +
Preference number: 4 (lower is better)
Translates to: TFILMHNYSIHMPQPRAGGSFKG*HTGQRV
Trigger: AACCCGCTGTCCTGTGTGCCAGCCCTTGAAGCTCCC...CCCTGCCCTGGGCTGAGGCATATGAATGCTATAGTTGTGCATTAAAATAAATGT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATATCAACTATCCAGTGACACGAGGCTaGGGGGAGCTTCAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: VERLDTGQRTHLSIYINYPVTRG*GELQGL
Trigger: CAGCCCTTGAAGCTCCCCCCAGCCTCGTGTCACTGG...ATAGTTGATATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GTGCCTGGGTCAATCCCCACTTCTTCCACAAAGCCCAATTTGATCTTTCCCTTCAGCCCCTTGTGGATCTaGGCCAGGGTATTAAGAAGA +
Preference number: 4 (lower is better)
Translates to: VPGSIPTSSTKPNLIFPFSPLWI*ARVLRR
Trigger: TCTTCTTAATACCCTGGCCCAGATCCACAAGGGGCT...GAAGGGAAAGATCAAATTGGGCTTTGTGGAAGAAGTGGGGATTGACCCAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CCA 90 bp ATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCGTAGAGGCGAATCAGTaGCAGGAAGGGCCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: ISGCNGRAHCSKTAQTTCVEANQ*QEGPVG
Trigger: ACCGACTGGCCCTTCCTGCCACTGATTCGCCTCTAC...GCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR CCA 90 bp TCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCGTCCAGGTTGAGGTTTaGCAAGACTTGAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: SGQTSVERLDTGQRTHLSVQVEV*QDLRLT
Trigger: TGTCAGCCTCAAGTCTTGCCAAACCTCAACCTGGAC...GGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR CCA 90 bp ACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATGAGCTCAAAGCCCTCTaGGAGCGTGGAATTGGGAAG +
Preference number: 4 (lower is better)
Translates to: TIRTQCSSSGQTSVERLDELKAL*ERGIGK
Trigger: CTTCCCAATTCCACGCTCCCAGAGGGCTTTGAGCTC...ATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCGATGTTGGGGAAAACTaGGAACTGAGAAGCAGCCAT +
Preference number: 4 (lower is better)
Translates to: LPVQTFRSPRYQDVMVGLDVGEN*ELRSSH
Trigger: ATGGCTGCTTCTCAGTTCCCAGTTTTCCCCAACATC...GAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR TCA 90 bp AGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTCACAACTTCCCCAACTaGTGGGCCCTTGGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: RYQDVMVGLTALKQLKQPHNFPN*WALGFS
Trigger: GCTGAAGCCAAGGGCCCATCAGTTGGGGAAGTTGTG...AGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp AACATCTGTCCTTCTAGCACAAGGATCAGGGTTAAAGACTACAGAGCAGATGTTACCAGATTGGGTCCCTaGAAGCTGTGGCTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: NICPSSTRIRVKDYRADVTRLGP*KLWLLP
Trigger: TGGGAGCAGCCACAGCTTTCAGGGACCCAATCTGGT...AACATCTGCTCTGTAGTCTTTAACCCTGATCCTTGTGCTAGAAGGACAGATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR TCA 90 bp TTTATTTTAATGCACAACTATAGCATTCATATGCCTCAGCCCAGGGCAGGGGTTTGCAGCCATTCTTTCTaGGGGGTCACGGGCAATGCC +
Preference number: 4 (lower is better)
Translates to: FILMHNYSIHMPQPRAGVCSHSF*GVTGNA
Trigger: GGCATTGCCCGTGACCCCTCAGAAAGAATGGCTGCA...AACCCCTGCCCTGGGCTGAGGCATATGAATGCTATAGTTGTGCATTAAAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp AACATCTGTCCTTCTAGCACAAGGATCAGGGTTAAAGACTACAGAGCAGATGTTTGCAGCCATTCTTTCTaGGGGGTCACGGGCAATGCC +
Preference number: 4 (lower is better)
Translates to: NICPSSTRIRVKDYRADVCSHSF*GVTGNA
Trigger: GGCATTGCCCGTGACCCCTCAGAAAGAATGGCTGCA...AACATCTGCTCTGTAGTCTTTAACCCTGATCCTTGTGCTAGAAGGACAGATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR TCA 90 bp TCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGTTCTCCCTGAAGACTaGATCGAGCCTGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: SSLPVQTFRSPRYQDVMVVLPED*IEPASS
Trigger: AGAGGATGCAGGCTCGATTCAGTCTTCAGGGAGAAC...TACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp GGACAACGTACCCATCTTTCCATCTATATCAACTATCCTAGGTCTCTGATACCCGGATGGCGGTTGCAATaGCCCCATCCACTCTGTCAT +
Preference number: 4 (lower is better)
Translates to: GQRTHLSIYINYPRSLIPGWRLQ*PHPLCH
Trigger: ATGACAGAGTGGATGGGGTCATTGCAACCGCCATCC...GGGTATCAGAGACCTAGGATAGTTGATATAGATGGAAAGATGGGTACGTTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp CAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATGTCGGCAGTCCAGGTTaGGGTTTGGCAAGACTTGAG +
Preference number: 4 (lower is better)
Translates to: QTSVERLDTGQRTHLSIYVGSPG*GLARLE
Trigger: CTCAAGTCTTGCCAAACCTCAACCTGGACTGCCGAC...ATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR TCA 90 bp ACATTTATTTTAATGCACAACTATAGCATTCATATGCCTCAGCCCAGGGCAGGGTCCTGCGGGCAGCTTTaGCCTCATCTGAGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: TFILMHNYSIHMPQPRAGSCGQL*PHLSSV
Trigger: CACAGAGCTCAGATGAGGTCAAAGCTGCCCGCAGGA...CCCTGCCCTGGGCTGAGGCATATGAATGCTATAGTTGTGCATTAAAATAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000561603.5
CDS-3UTR TCA 90 bp AATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCATTTTGGAGCACTGTTaGAGTCAGTCTCTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: NGRAHCSKTAQTTCSQEGILEHC*SQSLEV
Trigger: TACCTCCAGAGACTGACTTCAACAGTGCTCCAAAAT...GCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp ACATTTATTTTAATGCACAACTATAGCATTCATATGCCTCAGCCCAGGGCAGGGCAGGTCCTGCTGGGCTaGGAAAGTACCTGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: TFILMHNYSIHMPQPRAGQVLLG*ESTWVR
Trigger: TCTGACCCAGGTACTTTCTCAGCCCAGCAGGACCTG...CCCTGCCCTGGGCTGAGGCATATGAATGCTATAGTTGTGCATTAAAATAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR GCA 90 bp AATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCCATGGCCTGCAGTCTTaGTATGTTCTCTTCATGGAT +
Preference number: 4 (lower is better)
Translates to: NGRAHCSKTAQTTCSQEGHGLQS*YVLFMD
Trigger: ATCCATGAAGAGAACATAGCAAGACTGCAGGCCATG...GCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp TGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTCAGGAGCCATGGCCTaGAGTCTTGCTATGTTCTCT +
Preference number: 4 (lower is better)
Translates to: CLPLGHNVLRLARHLLKGSGAMA*SLAMFS
Trigger: AGAGAACATAGCAAGACTGCAGGCCATGGCTCCTGA...GCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp TTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGTCAGGAGCCATGGCCTaGAGTCTTGCTATGTTCTCT +
Preference number: 4 (lower is better)
Translates to: FTPSTDLQKPQISGCNGRSGAMA*SLAMFS
Trigger: AGAGAACATAGCAAGACTGCAGGCCATGGCTCCTGA...CCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp TTTATTTTAATGCACAACTATAGCATTCATATGCCTCAGCCCAGGGCAGGGGTTGGAGGCTTAAGACACTaGCTGCTAGCCGGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: FILMHNYSIHMPQPRAGVGGLRH*LLAGPQ
Trigger: TTGGGGACCGGCTAGCAGGCAGTGTCTTAAGCCTCC...AACCCCTGCCCTGGGCTGAGGCATATGAATGCTATAGTTGTGCATTAAAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp CTTCTGCTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCCTTTTTGCTTTTCCTaGTGGGCATTCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: LLLLGLLPTIRTQCSSSGPFCFS*WAFFIL
Trigger: GAGGATGAAGAATGCCCAGCAGGAAAAGCAAAAAGG...GCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp ACATTTATTTTAATGCACAACTATAGCATTCATATGCCTCAGCCCAGGGCAGGGATGGCGCAGGGCCCATaGAGAGAAAGGTGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: TFILMHNYSIHMPQPRAGMAQGP*RERCEV
Trigger: CACCTCACACCTTTCTCTGCATGGGCCCTGCGCCAT...CCCTGCCCTGGGCTGAGGCATATGAATGCTATAGTTGTGCATTAAAATAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp TCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAAGCAGCCATGTTTTCTaGAGCATACTCCTGCGGGCA +
Preference number: 4 (lower is better)
Translates to: SSLPVQTFRSPRYQDVMVSSHVF*SILLRA
Trigger: TGCCCGCAGGAGTATGCTGCAGAAAACATGGCTGCT...TACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp TCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCTGCTCCTTGGTCTCCTaGCTACCATTAGGACACAAT +
Preference number: 4 (lower is better)
Translates to: SGQTSVERLDTGQRTHLSCSLVS*LPLGHN
Trigger: ATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCA...GGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp AAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTTGCTCCTTGGTCTCCTaGCTACCATTAGGACACAAT +
Preference number: 4 (lower is better)
Translates to: KPLFTPSTDLQKPQISGCCSLVS*LPLGHN
Trigger: ATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCA...ACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp ACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGCTCAAACAACCTaGTCCCAGGAAGGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: TIRTQCSSSGQTSVERLDTAQTT*SQEGKP
Trigger: AGGCTTGCCTTCCTGGGAGCAGGTTGTTTGAGCTGT...ATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp GTGGATAACGATCACATGAAACCAAATCATGAGGGCAGAGATCAGGTCCTAGACACAGCTCAAACAACCTaGTCCCAGGAAGGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: VDNDHMKPNHEGRDQVLDTAQTT*SQEGKP
Trigger: AGGCTTGCCTTCCTGGGAGCAGGTTGTTTGAGCTGT...GTCTAGGACCTGATCTCTGCCCTCATGATTTGGTTTCATGTGATCGTTATCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR GCA 90 bp CTGCTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGAATGGTAGGGCTCACTaGTCTAAAACAGCTCAAACA +
Preference number: 4 (lower is better)
Translates to: LLLGLLPTIRTQCSSSGQNGRAH*SKTAQT
Trigger: TGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATT...CTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp TCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAACTATAGCATTCATATaGCTCAGCCCAGGGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SSLPVQTFRSPRYQDVMVTIAFI*LSPGQG
Trigger: CCCCTGCCCTGGGCTGAGGCATATGAATGCTATAGT...TACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp TCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCCTGTTAGGAATCTCCTaGCTTTCTACCTCCTCACCA +
Preference number: 4 (lower is better)
Translates to: SGQTSVERLDTGQRTHLSLLGIS*LSTSSP
Trigger: TGGTGAGGAGGTAGAAAGGCAGGAGATTCCTAACAG...GGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CCA 90 bp GCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTAGCTGGGGGCAAATCTaGGAGATTGTCCAACATCAC +
Preference number: 4 (lower is better)
Translates to: ARHLLKGWIQDNVPIFPSSWGQI*EIVQHH
Trigger: GTGATGTTGGACAATCTCCCAGATTTGCCCCCAGCT...AGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp TGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCAGAAGGGACCAAAGCTaGGGGCAAATCTGGGAGATT +
Preference number: 4 (lower is better)
Translates to: CLPLGHNVLRLARHLLKGRRDQS*GQIWEI
Trigger: AATCTCCCAGATTTGCCCCCAGCTTTGGTCCCTTCT...GCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGAGAAGGGACCAAAGCTaGGGGCAAATCTGGGAGATT +
Preference number: 4 (lower is better)
Translates to: PTIRTQCSSSGQTSVERLRRDQS*GQIWEI
Trigger: AATCTCCCAGATTTGCCCCCAGCTTTGGTCCCTTCT...CAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACCTTGCCGCAATTTCCTaGGCAAAGATGCTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: PSTDLQKPQISGCNGRAHLAAIS*AKMLLL
Trigger: TAAGAGAAGCATCTTTGCCCAGGAAATTGCGGCAAG...GTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATATCAACTATCTGGTGGGCCCACGTTaGGCACAACTTCCCCAACTG +
Preference number: 4 (lower is better)
Translates to: VERLDTGQRTHLSIYINYLVGPR*AQLPQL
Trigger: CAGTTGGGGAAGTTGTGCCCAACGTGGGCCCACCAG...ATAGTTGATATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp TCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCGCTATGTTCTCTTCATaGATAGTCTGGGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: SGQTSVERLDTGQRTHLSAMFSS*IVWASC
Trigger: GCAGGAAGCCCAGACTATCCATGAAGAGAACATAGC...GGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATATCAACTATCTCTGCTGGGAAACCTaGCTGCGGGTCAGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: VERLDTGQRTHLSIYINYLCWET*LRVRWN
Trigger: GTTCCACCTGACCCGCAGCCAGGTTTCCCAGCAGAG...ATAGTTGATATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp AGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCCCTGCTGATGACCTaGGCTAACACATGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: RYQDVMVGLTALKQLKQPALLMT*ANTCSA
Trigger: GGCACTGCATGTGTTAGCCCAGGTCATCAGCAGGGC...AGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp AACATCTGTCCTTCTAGCACAAGGATCAGGGTTAAAGACTACAGAGCAGATGTTGCCCTGCTGATGACCTaGGCTAACACATGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: NICPSSTRIRVKDYRADVALLMT*ANTCSA
Trigger: GGCACTGCATGTGTTAGCCCAGGTCATCAGCAGGGC...AACATCTGCTCTGTAGTCTTTAACCCTGATCCTTGTGCTAGAAGGACAGATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CCA 90 bp CCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTAACGTCAAAGCTCCATaGTACCAAGAGAAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: PVQTFRSPRYQDVMVGLTNVKAP*YQEKVL
Trigger: CAGCACCTTCTCTTGGTACCATGGAGCTTTGACGTT...AGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTAAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATAACGTCAAAGCTCCATaGTACCAAGAGAAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LSHSSLPVQTFRSPRYQDNVKAP*YQEKVL
Trigger: CAGCACCTTCTCTTGGTACCATGGAGCTTTGACGTT...ATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp AGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTTCCTCCTTGTCCTCCTaGCTGGGCATCAGAGGGAAC +
Preference number: 4 (lower is better)
Translates to: RYQDVMVGLTALKQLKQPSSLSS*LGIRGN
Trigger: GTTCCCTCTGATGCCCAGCCAGGAGGACAAGGAGGA...AGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATGGCAAGGCCAGTTCTTaGGGAGCCTCAGCTATGATG +
Preference number: 4 (lower is better)
Translates to: QTSVERLDTGQRTHLSIYGKASS*GASAMM
Trigger: CATCATAGCTGAGGCTCCCCAAGAACTGGCCTTGCC...ATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATATCAACTATACAGGCTGCCCAGTGTaGGCTGACTCAGCAGTGGCA +
Preference number: 4 (lower is better)
Translates to: VERLDTGQRTHLSIYINYTGCPV*ADSAVA
Trigger: TGCCACTGCTGAGTCAGCCCACACTGGGCAGCCTGT...ATAGTTGATATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp AGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGAAGCCCCTTGTGGATCTaGGCCAGGGTATTAAGAAGA +
Preference number: 4 (lower is better)
Translates to: RTQCSSSGQTSVERLDTGSPLWI*ARVLRR
Trigger: TCTTCTTAATACCCTGGCCCAGATCCACAAGGGGCT...TCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp ATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCCTCAGCAGCAGCTCATaGGTGAGGTACTCACTTCCG +
Preference number: 4 (lower is better)
Translates to: ISGCNGRAHCSKTAQTTCLSSSS*VRYSLP
Trigger: CGGAAGTGAGTACCTCACCCATGAGCTGCTGCTGAG...GCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATCTCAGCAGCAGCTCATaGGTGAGGTACTCACTTCCG +
Preference number: 4 (lower is better)
Translates to: QTSVERLDTGQRTHLSIYLSSSS*VRYSLP
Trigger: CGGAAGTGAGTACCTCACCCATGAGCTGCTGCTGAG...ATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp ACATTTATTTTAATGCACAACTATAGCATTCATATGCCTCAGCCCAGGGCAGGGGTAGAGGCGAATCAGTaGCAGGAAGGGCCAGTCGGT +
Preference number: 4 (lower is better)
Translates to: TFILMHNYSIHMPQPRAGVEANQ*QEGPVG
Trigger: ACCGACTGGCCCTTCCTGCCACTGATTCGCCTCTAC...CCCTGCCCTGGGCTGAGGCATATGAATGCTATAGTTGTGCATTAAAATAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR CCA 90 bp CCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTCATCTGTTGAAAGGCTaGATACAGGACAACGTACCC +
Preference number: 4 (lower is better)
Translates to: PVQTFRSPRYQDVMVGLTHLLKG*IQDNVP
Trigger: GGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATG...AGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACCTACAGAGCAGATGTTaGGGAAAACTGGGAACTGAG +
Preference number: 4 (lower is better)
Translates to: GHNVLRLARHLLKGWIQDLQSRC*GKLGTE
Trigger: CTCAGTTCCCAGTTTTCCCCAACATCTGCTCTGTAG...GTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CCA 90 bp ACATCTGTCCTTCTAGCACAAGGATCAGGGTTAAAGACTACAGAGCAGATGTTGGCTGGTACCCACCACTaGCCTTGCTTGACACTTACC +
Preference number: 4 (lower is better)
Translates to: TSVLLAQGSGLKTTEQMLAGTHH*PCLTLT
Trigger: GGTAAGTGTCAAGCAAGGCCAGTGGTGGGTACCAGC...CAACATCTGCTCTGTAGTCTTTAACCCTGATCCTTGTGCTAGAAGGACAGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR TCA 90 bp CTAAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATCAGATTCACGGCCACTaGACTTGTATCTCGTTCAAT +
Preference number: 4 (lower is better)
Translates to: LSHSSLPVQTFRSPRYQDQIHGH*TCISFN
Trigger: ATTGAACGAGATACAAGTTCAGTGGCCGTGAATCTG...ATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp TCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTATCTTGCGTGTGGCTGTaGGATCTCAAGAAAGCAACC +
Preference number: 4 (lower is better)
Translates to: SSLPVQTFRSPRYQDVMVSCVWL*DLKKAT
Trigger: GGTTGCTTTCTTGAGATCTCACAGCCACACGCAAGA...TACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp GGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCATTTTGGAGCACTGTTaGAGTCAGTCTCTGGAGGTA +
Preference number: 4 (lower is better)
Translates to: GQTSVERLDTGQRTHLSIILEHC*SQSLEV
Trigger: TACCTCCAGAGACTGACTTCAACAGTGCTCCAAAAT...GATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp GACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACTATCCTAGGTCTCTaGTACCCCATTTTGGAGCAC +
Preference number: 4 (lower is better)
Translates to: DLQKPQISGCNGRAHCSKTILGL*YPILEH
Trigger: GTGCTCCAAAATGGGGTATCAGAGACCTAGGATAGT...TTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp TGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCCCCTTCTCTGAATCCTaGTACCACCTAGCATCTGAA +
Preference number: 4 (lower is better)
Translates to: CLPLGHNVLRLARHLLKGPFSES*YHLASE
Trigger: TTCAGATGCTAGGTGGTATCAGGATTCAGAGAAGGG...GCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR TCA 90 bp TCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCATGAAACCAAATCATaGGGGCAGAGATCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: SGCNGRAHCSKTAQTTCSHETKS*GQRSGP
Trigger: AGGACCTGATCTCTGCCCTCATGATTTGGTTTCATG...GGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR GCA 90 bp CTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCTGGGCAAAGATaGTTCTCTTACCAGATGTTG +
Preference number: 4 (lower is better)
Translates to: LRLARHLLKGWIQDNVPIFPGQR*FSYQML
Trigger: CAACATCTGGTAAGAGAAGCATCTTTGCCCAGGAAA...GATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp GTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATATCAACTATCACACCGAGGGACCCTaGTGCTTCCTAACGACAGCT +
Preference number: 4 (lower is better)
Translates to: VERLDTGQRTHLSIYINYHTEGP*CFLTTA
Trigger: AGCTGTCGTTAGGAAGCAGCAGGGTCCCTCGGTGTG...ATAGTTGATATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR GCA 90 bp GCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTTGCTCCTTGGTCTCCTaGCTACCATTAGGACACAAT +
Preference number: 4 (lower is better)
Translates to: ARHLLKGWIQDNVPIFPSCSLVS*LPLGHN
Trigger: ATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCA...AGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp ACATTTATTTTAATGCACAACTATAGCATTCATATGCCTCAGCCCAGGGCAGGGGGAAGGCAAGCCTTCTaGTCCTTGGTCTCCTGCCTA +
Preference number: 4 (lower is better)
Translates to: TFILMHNYSIHMPQPRAGGRQAF*SLVSCL
Trigger: TAGGCAGGAGACCAAGGAGCAGAAGGCTTGCCTTCC...CCCTGCCCTGGGCTGAGGCATATGAATGCTATAGTTGTGCATTAAAATAAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp ACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATAGCAGTGTCTCCGTGTaGGGGTTCCCTCTTATTCAT +
Preference number: 4 (lower is better)
Translates to: TIRTQCSSSGQTSVERLDSSVSV*GFPLIH
Trigger: ATGAATAAGAGGGAACCCCCACACGGAGACACTGCT...ATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp ACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATAGCTGGGGGCAAATCTaGGAGATTGTCCAACATCAC +
Preference number: 4 (lower is better)
Translates to: TIRTQCSSSGQTSVERLDSWGQI*EIVQHH
Trigger: GTGATGTTGGACAATCTCCCAGATTTGCCCCCAGCT...ATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAAGCTGGGGGCAAATCTaGGAGATTGTCCAACATCAC +
Preference number: 4 (lower is better)
Translates to: LQKPQISGCNGRAHCSKTSWGQI*EIVQHH
Trigger: GTGATGTTGGACAATCTCCCAGATTTGCCCCCAGCT...TGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAGCTATGTTCTCTTCATaGATAGTCTGGGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: LLPTIRTQCSSSGQTSVEAMFSS*IVWASC
Trigger: GCAGGAAGCCCAGACTATCCATGAAGAGAACATAGC...TTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGAACGTCAAAGCTCCATaGTACCAAGAGAAGGTGCTG +
Preference number: 4 (lower is better)
Translates to: PTIRTQCSSSGQTSVERLNVKAP*YQEKVL
Trigger: CAGCACCTTCTCTTGGTACCATGGAGCTTTGACGTT...CAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp TTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTTTGCTTTTCCTGCTaGGCATTCTTCATCCTCGTC +
Preference number: 4 (lower is better)
Translates to: LVSCLPLGHNVLRLARHLFCFSC*AFFILV
Trigger: GACGAGGATGAAGAATGCCCAGCAGGAAAAGCAAAA...CAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTTTTGCTTTTCCTGCTaGGCATTCTTCATCCTCGTC +
Preference number: 4 (lower is better)
Translates to: GQTSVERLDTGQRTHLSIFCFSC*AFFILV
Trigger: GACGAGGATGAAGAATGCCCAGCAGGAAAAGCAAAA...GATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp ACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAAAGCCCCTTGTGGATCTaGGCCAGGGTATTAAGAAGA +
Preference number: 4 (lower is better)
Translates to: TFRSPRYQDVMVGLTALKSPLWI*ARVLRR
Trigger: TCTTCTTAATACCCTGGCCCAGATCCACAAGGGGCT...TTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp TTTATTTTAATGCACAACTATAGCATTCATATGCCTCAGCCCAGGGCAGGGGTTCTCACTGGCAAAAGCTaGCATGAGGGGTTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: FILMHNYSIHMPQPRAGVLTGKS*HEGFLL
Trigger: AAGGAGGAACCCCTCATGTCAGCTTTTGCCAGTGAG...AACCCCTGCCCTGGGCTGAGGCATATGAATGCTATAGTTGTGCATTAAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp GGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGTTTCCTGGGCAAAGATaGTTCTCTTACCAGATGTTG +
Preference number: 4 (lower is better)
Translates to: GCNGRAHCSKTAQTTCSQFPGQR*FSYQML
Trigger: CAACATCTGGTAAGAGAAGCATCTTTGCCCAGGAAA...CTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp AGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACATGGCCTGCAGTCTTaGTATGTTCTCTTCATGGAT +
Preference number: 4 (lower is better)
Translates to: RTQCSSSGQTSVERLDTGHGLQS*YVLFMD
Trigger: ATCCATGAAGAGAACATAGCAAGACTGCAGGCCATG...TCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp GTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATATCAACTATACCTGGGCTAACACATaGAGTGCCAGTGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VERLDTGQRTHLSIYINYTWANT*SASALC
Trigger: GCAGAGAGCACTGGCACTGCATGTGTTAGCCCAGGT...ATAGTTGATATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATAGCAGTGTCTCCGTGTaGGGGTTCCCTCTTATTCAT +
Preference number: 4 (lower is better)
Translates to: QTSVERLDTGQRTHLSIYSSVSV*GFPLIH
Trigger: ATGAATAAGAGGGAACCCCCACACGGAGACACTGCT...ATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGCTTGCCGCAATTTCCTaGGCAAAGATGCTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: PTIRTQCSSSGQTSVERLLAAIS*AKMLLL
Trigger: TAAGAGAAGCATCTTTGCCCAGGAAATTGCGGCAAG...CAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp TTTATTTTAATGCACAACTATAGCATTCATATGCCTCAGCCCAGGGCAGGGGTTCAACTGATGGGCCCTTaGCTTCAGCTATCCTCCTTG +
Preference number: 4 (lower is better)
Translates to: FILMHNYSIHMPQPRAGVQLMGP*LQLSSL
Trigger: CAAGGAGGATAGCTGAAGCCAAGGGCCCATCAGTTG...AACCCCTGCCCTGGGCTGAGGCATATGAATGCTATAGTTGTGCATTAAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp AGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGAAATGATCCAGGAAGTTaGCATAGAGGTCAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: RTQCSSSGQTSVERLDTGNDPGS*HRGQGK
Trigger: CTTTCCCTGACCTCTATGCCAACTTCCTGGATCATT...TCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR CCA 90 bp ATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCCTGGGAGCGTGGAATTaGGAAGCTTATAGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: ISGCNGRAHCSKTAQTTCLGAWN*EAYSAG
Trigger: TCCTGCACTATAAGCTTCCCAATTCCACGCTCCCAG...GCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp ACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATCATCTGTTGAAAGGCTaGATACAGGACAACGTACCC +
Preference number: 4 (lower is better)
Translates to: TIRTQCSSSGQTSVERLDHLLKG*IQDNVP
Trigger: GGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATG...ATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp TTTATTTTAATGCACAACTATAGCATTCATATGCCTCAGCCCAGGGCAGGGGTTCCAACCTACAGTGCCTaGGTCAATCCCCACTTCTTC +
Preference number: 4 (lower is better)
Translates to: FILMHNYSIHMPQPRAGVPTYSA*VNPHFF
Trigger: GAAGAAGTGGGGATTGACCCAGGCACTGTAGGTTGG...AACCCCTGCCCTGGGCTGAGGCATATGAATGCTATAGTTGTGCATTAAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR TCA 90 bp GTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATATCAACTATCTTACCAGATGTTGCTaGTTTCCCCTGTGTGTCCCG +
Preference number: 4 (lower is better)
Translates to: VERLDTGQRTHLSIYINYLTRCC*FPLCVP
Trigger: CGGGACACACAGGGGAAATCAGCAACATCTGGTAAG...ATAGTTGATATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp TTTATTTTAATGCACAACTATAGCATTCATATGCCTCAGCCCAGGGCAGGGGTTTCTTGCGTGTGGCTGTaGGATCTCAAGAAAGCAACC +
Preference number: 4 (lower is better)
Translates to: FILMHNYSIHMPQPRAGVSCVWL*DLKKAT
Trigger: GGTTGCTTTCTTGAGATCTCACAGCCACACGCAAGA...AACCCCTGCCCTGGGCTGAGGCATATGAATGCTATAGTTGTGCATTAAAATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp ATTGTAGCACTGATAAGCAAGGAGCTATGCCTTATTAATAGTAATGAATACCCAGTCTCGACAGCATCTTaGTGCTCCAGCTGCCTCCCC +
Preference number: 4 (lower is better)
Translates to: IVALISKELCLINSNEYPVSTAS*CSSCLP
Trigger: GGGGAGGCAGCTGGAGCAGCAAGATGCTGTCGAGAC...TGGGTATTCATTACTATTAATAAGGCATAGCTCCTTGCTTATCAGTGCTACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR GCA 90 bp GTCCTTCTAGCACAAGGATCAGGGTTAAAGACTACAGAGCAGATGTTGGGGAAACATGGCCTGCAGTCTTaGTATGTTCTCTTCATGGAT +
Preference number: 4 (lower is better)
Translates to: VLLAQGSGLKTTEQMLGKHGLQS*YVLFMD
Trigger: ATCCATGAAGAGAACATAGCAAGACTGCAGGCCATG...TTTCCCCAACATCTGCTCTGTAGTCTTTAACCCTGATCCTTGTGCTAGAAGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR GCA 90 bp TCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTACCTTTTTGCTTTTCCTaGTGGGCATTCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: SSLPVQTFRSPRYQDVMVPFCFS*WAFFIL
Trigger: GAGGATGAAGAATGCCCAGCAGGAAAAGCAAAAAGG...TACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp GTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATATCAACTATGGGATGCATTTAGTTTaGCCTGTCCCCAAAGAGCGG +
Preference number: 4 (lower is better)
Translates to: VERLDTGQRTHLSIYINYGMHLV*PVPKER
Trigger: CCGCTCTTTGGGGACAGGGCAAACTAAATGCATCCC...ATAGTTGATATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp ACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACTTGCCGCAATTTCCTaGGCAAAGATGCTTCTCTTA +
Preference number: 4 (lower is better)
Translates to: TFRSPRYQDVMVGLTALKLAAIS*AKMLLL
Trigger: TAAGAGAAGCATCTTTGCCCAGGAAATTGCGGCAAG...TTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp CTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACATTTTGCTTTTCCTGCTaGGCATTCTTCATCCTCGTC +
Preference number: 4 (lower is better)
Translates to: LQKPQISGCNGRAHCSKTFCFSC*AFFILV
Trigger: GACGAGGATGAAGAATGCCCAGCAGGAAAAGCAAAA...TGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp ACATTTATTTTAATGCACAACTATAGCATTCATATGCCTCAGCCCAGGGCAGGGGTCCAGGTTGAGGTTTaGCAAGACTTGAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: TFILMHNYSIHMPQPRAGVQVEV*QDLRLT
Trigger: TGTCAGCCTCAAGTCTTGCCAAACCTCAACCTGGAC...CCCTGCCCTGGGCTGAGGCATATGAATGCTATAGTTGTGCATTAAAATAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR CCA 90 bp TCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAAATGATCCAGGAAGTTaGCATAGAGGTCAGGGAAAG +
Preference number: 4 (lower is better)
Translates to: SSLPVQTFRSPRYQDVMVNDPGS*HRGQGK
Trigger: CTTTCCCTGACCTCTATGCCAACTTCCTGGATCATT...TACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
3UTR CAA 72 bp TTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTaGAAAGGCTGGATACAGGACAACGTACCCATCTTT +
Preference number: 4 (lower is better)
Translates to: LGHNVLRLARHL*KGWIQDNVPIF
Trigger: AAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp ATTGTAGCACTGATAAGCAAGGAGCTATGCCTTATTAATAGTAATGAATACCCAACACCTGTGTCCAAGTaGCTAAGGAAGGGGTGGCCG +
Preference number: 4 (lower is better)
Translates to: IVALISKELCLINSNEYPTPVSK*LRKGWP
Trigger: CGGCCACCCCTTCCTTAGTCACTTGGACACAGGTGT...TGGGTATTCATTACTATTAATAAGGCATAGCTCCTTGCTTATCAGTGCTACAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR TCA 90 bp GTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATATCAACTATGAGCTCTGTGGGTCCTaGGAGAAGATGAAGCTATTG +
Preference number: 4 (lower is better)
Translates to: VERLDTGQRTHLSIYINYELCGS*EKMKLL
Trigger: CAATAGCTTCATCTTCTCTCAGGACCCACAGAGCTC...ATAGTTGATATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp ACATTTATTTTAATGCACAACTATAGCATTCATATGCCTCAGCCCAGGGCAGGGACTATCCTAGGTCTCTaGTACCCCATTTTGGAGCAC +
Preference number: 4 (lower is better)
Translates to: TFILMHNYSIHMPQPRAGTILGL*YPILEH
Trigger: GTGCTCCAAAATGGGGTATCAGAGACCTAGGATAGT...CCCTGCCCTGGGCTGAGGCATATGAATGCTATAGTTGTGCATTAAAATAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp TCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAAATGGTAGGGCTCACTaGTCTAAAACAGCTCAAACA +
Preference number: 4 (lower is better)
Translates to: SCLPLGHNVLRLARHLLKNGRAH*SKTAQT
Trigger: TGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATT...TTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp GTCCTTCTAGCACAAGGATCAGGGTTAAAGACTACAGAGCAGATGTTGGGGAAAAATGGTAGGGCTCACTaGTCTAAAACAGCTCAAACA +
Preference number: 4 (lower is better)
Translates to: VLLAQGSGLKTTEQMLGKNGRAH*SKTAQT
Trigger: TGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATT...TTTCCCCAACATCTGCTCTGTAGTCTTTAACCCTGATCCTTGTGCTAGAAGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CCA 90 bp GTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATATCAACTATCAGGAGACCAACTGGTaGGCAAGAACTCTCGAACTA +
Preference number: 4 (lower is better)
Translates to: VERLDTGQRTHLSIYINYQETNW*ARTLEL
Trigger: TAGTTCGAGAGTTCTTGCCCACCAGTTGGTCTCCTG...ATAGTTGATATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp AGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTCATCTGTTGAAAGGCTaGATACAGGACAACGTACCC +
Preference number: 4 (lower is better)
Translates to: RYQDVMVGLTALKQLKQPHLLKG*IQDNVP
Trigger: GGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATG...AGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp AACATCTGTCCTTCTAGCACAAGGATCAGGGTTAAAGACTACAGAGCAGATGTTCAGATTCACGGCCACTaGACTTGTATCTCGTTCAAT +
Preference number: 4 (lower is better)
Translates to: NICPSSTRIRVKDYRADVQIHGH*TCISFN
Trigger: ATTGAACGAGATACAAGTTCAGTGGCCGTGAATCTG...AACATCTGCTCTGTAGTCTTTAACCCTGATCCTTGTGCTAGAAGGACAGATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR TCA 90 bp CTTTCCATCTATATCAACTATCCTAGGTCTCTGATACCCCATTTTGGAGCACTGGGGAAAACTGGGAACTaGGAAGCAGCCATTAAAAAG +
Preference number: 4 (lower is better)
Translates to: LSIYINYPRSLIPHFGALGKTGN*EAAIKK
Trigger: CTTTTTAATGGCTGCTTCTCAGTTCCCAGTTTTCCC...CAGTGCTCCAAAATGGGGTATCAGAGACCTAGGATAGTTGATATAGATGGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR TCA 90 bp ATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTGGATAACGATCACATaGAACCAAATCATGAGGGCA +
Preference number: 4 (lower is better)
Translates to: ISGCNGRAHCSKTAQTTCWITIT*NQIMRA
Trigger: TGCCCTCATGATTTGGTTTCATGTGATCGTTATCCA...GCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR GCA 90 bp ATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTTTCCTGGGCAAAGATaGTTCTCTTACCAGATGTTG +
Preference number: 4 (lower is better)
Translates to: ISGCNGRAHCSKTAQTTCFPGQR*FSYQML
Trigger: CAACATCTGGTAAGAGAAGCATCTTTGCCCAGGAAA...GCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR GCA 90 bp ACATTTATTTTAATGCACAACTATAGCATTCATATGCCTCAGCCCAGGGCAGGGCCTTTTTGCTTTTCCTaGTGGGCATTCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: TFILMHNYSIHMPQPRAGPFCFS*WAFFIL
Trigger: GAGGATGAAGAATGCCCAGCAGGAAAAGCAAAAAGG...CCCTGCCCTGGGCTGAGGCATATGAATGCTATAGTTGTGCATTAAAATAAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CCA 90 bp GTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATATCAACTATGCTATGTTCTCTTCATaGATAGTCTGGGCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: VERLDTGQRTHLSIYINYAMFSS*IVWASC
Trigger: GCAGGAAGCCCAGACTATCCATGAAGAGAACATAGC...ATAGTTGATATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR TCA 90 bp GTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATATCAACTATCAGATTCACGGCCACTaGACTTGTATCTCGTTCAAT +
Preference number: 4 (lower is better)
Translates to: VERLDTGQRTHLSIYINYQIHGH*TCISFN
Trigger: ATTGAACGAGATACAAGTTCAGTGGCCGTGAATCTG...ATAGTTGATATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS GCA 90 bp GGCATGGGCAGTAGCAGGGTTGGGACTCGCTGTAGCTCCCCTCGGTaGAGAGCCTGGGAGGCCAGCAGACTGGCTCGGGCTGGCGAGCAA +
Preference number: 5 (lower is better)
Translates to: GMGSSRVGTRCSSPR*RAWEASRLARAGEQ
Trigger: TTGCTCGCCAGCCCGAGCCAGTCTGCTGGCCTCCCAGGCTCTGCACCGAGGGGAGCTACAGCGAGTCCCAACCCTGCTACTGCCCATGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS CCA 90 bp CTCCCCTCGGTGCAGAGCCTGGGAGGCCAGCAGACTGGCTCGGGCTaGCGAGCAATGAGTCAGGTAGCAGTTGCGGATGCTGGGGAGGTC +
Preference number: 5 (lower is better)
Translates to: LPSVQSLGGQQTGSG*RAMSQVAVADAGEV
Trigger: GACCTCCCCAGCATCCGCAACTGCTACCTGACTCATTGCTCGCCAGCCCGAGCCAGTCTGCTGGCCTCCCAGGCTCTGCACCGAGGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS GCA 90 bp GACTGGCTCGGGCTGGCGAGCAATGAGTCAGGTAGCAGTTGCGGATaGTGGGGAGGTCCTGGCAGGCCTGAGCCAGCAGAGTCCCTTGCC +
Preference number: 5 (lower is better)
Translates to: DWLGLASNESGSSCG*WGGPGRPEPAESLA
Trigger: GGCAAGGGACTCTGCTGGCTCAGGCCTGCCAGGACCTCCCCAGCATCCGCAACTGCTACCTGACTCATTGCTCGCCAGCCCGAGCCAGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS GCA 90 bp CCAGCAGACTGGCTCGGGCTGGCGAGCAATGAGTCAGGTAGCAGTTaGGGATGCTGGGGAGGTCCTGGCAGGCCTGAGCCAGCAGAGTCC +
Preference number: 5 (lower is better)
Translates to: PADWLGLASNESGSS*GCWGGPGRPEPAES
Trigger: GGACTCTGCTGGCTCAGGCCTGCCAGGACCTCCCCAGCATCCGCAACTGCTACCTGACTCATTGCTCGCCAGCCCGAGCCAGTCTGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS CCA 90 bp GGCTCAGCAGGGCCAAGGCCATACCATGATAGAGGGCAGCATGGGTaGCTGGCAGTGGCTGCAGCGCTGCCGCTTTCTGGGCCAGAGCGA +
Preference number: 5 (lower is better)
Translates to: GSAGPRPYHDRGQHG*LAVAAALPLSGPER
Trigger: TCGCTCTGGCCCAGAAAGCGGCAGCGCTGCAGCCACTGCCAGCCACCCATGCTGCCCTCTATCATGGTATGGCCTTGGCCCTGCTGAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS CCA 90 bp TGGCTCGGGCTGGCGAGCAATGAGTCAGGTAGCAGTTGCGGATGCTaGGGAGGTCCTGGCAGGCCTGAGCCAGCAGAGTCCCTTGCCCAC +
Preference number: 5 (lower is better)
Translates to: WLGLASNESGSSCGC*GGPGRPEPAESLAH
Trigger: GTGGGCAAGGGACTCTGCTGGCTCAGGCCTGCCAGGACCTCCCCAGCATCCGCAACTGCTACCTGACTCATTGCTCGCCAGCCCGAGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS CCA 90 bp CTCGCTGTAGCTCCCCTCGGTGCAGAGCCTGGGAGGCCAGCAGACTaGCTCGGGCTGGCGAGCAATGAGTCAGGTAGCAGTTGCGGATGC +
Preference number: 5 (lower is better)
Translates to: LAVAPLGAEPGRPAD*LGLASNESGSSCGC
Trigger: GCATCCGCAACTGCTACCTGACTCATTGCTCGCCAGCCCGAGCCAGTCTGCTGGCCTCCCAGGCTCTGCACCGAGGGGAGCTACAGCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS CCA 90 bp CTAGCACCCACTGCAGGACCCGCATGGCTGTGCCCATGGTGTCTGTaGGAGAGAGTCCCGAGGGGGTGTCTGAAGCCCGGTGGTAGAGGC +
Preference number: 5 (lower is better)
Translates to: LAPTAGPAWLCPWCL*ERVPRGCLKPGGRG
Trigger: GCCTCTACCACCGGGCTTCAGACACCCCCTCGGGACTCTCTCCCACAGACACCATGGGCACAGCCATGCGGGTCCTGCAGTGGGTGCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS TCA 90 bp GGCTGTGCCCATGGTGTCTGTGGGAGAGAGTCCCGAGGGGGTGTCTaGAGCCCGGTGGTAGAGGCGAATCAGTGGCAGGAAGGGCCAGTC +
Preference number: 5 (lower is better)
Translates to: GCAHGVCGRESRGGV*SPVVEANQWQEGPV
Trigger: GACTGGCCCTTCCTGCCACTGATTCGCCTCTACCACCGGGCTTCAGACACCCCCTCGGGACTCTCTCCCACAGACACCATGGGCACAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS GCA 90 bp CGGACTCCCCTGGCTTCGGTCTCGACAGCATCTTGCTGCTCCAGCTaGCTCCCCAGTACGACTCTCTCCAGCAGTGTCTCCGTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: RTPLASVSTASCCSS*LPSTTLSSSVSVWG
Trigger: CCCCCACACGGAGACACTGCTGGAGAGAGTCGTACTGGGGAGGCAGCTGGAGCAGCAAGATGCTGTCGAGACCGAAGCCAGGGGAGTCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000566863.1
ENST00000567866.5
ENST00000569829.1
CDS GCA 90 bp GGCTGCAGCGCTGCCGCTTTCTGGGCCAGAGCGAGTGCCAGGTACTaGAGGTGGTACTCATGGCGCAGGGCCCATGCAGAGAAAGGTGTG +
Preference number: 5 (lower is better)
Translates to: GCSAAAFWARASARY*RWYSWRRAHAEKGV
Trigger: CACACCTTTCTCTGCATGGGCCCTGCGCCATGAGTACCACCTGCAGTACCTGGCACTCGCTCTGGCCCAGAAAGCGGCAGCGCTGCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS GCA 90 bp GGCAGGCCTGAGCCAGCAGAGTCCCTTGCCCACACCGAGGGACCCTaGTGCTTCCTAACGACAGCTGGTCAGAGAAGTCGGCTGCCTCTG +
Preference number: 5 (lower is better)
Translates to: GRPEPAESLAHTEGP*CFLTTAGQRSRLPL
Trigger: CAGAGGCAGCCGACTTCTCTGACCAGCTGTCGTTAGGAAGCAGCAGGGTCCCTCGGTGTGGGCAAGGGACTCTGCTGGCTCAGGCCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS TCA 90 bp CCCAGGTGGGTGGGCAGGTCCACGTCAGGGGCCAGTAGTTCTCCCTaGAGACTGAATCGAGCCTGCATCCTCTCCTGTGTCTGCTGCCGC +
Preference number: 5 (lower is better)
Translates to: PRWVGRSTSGASSSP*RLNRACILSCVCCR
Trigger: GCGGCAGCAGACACAGGAGAGGATGCAGGCTCGATTCAGTCTTCAGGGAGAACTACTGGCCCCTGACGTGGACCTGCCCACCCACCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000568413.1
CDS GCA 90 bp GGTCCACCTCGGACTCCCCTGGCTTCGGTCTCGACAGCATCTTGCTaGTCCAGCTGCCTCCCCAGTACGACTCTCTCCAGCAGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: GPPRTPLASVSTASC*SSCLPSTTLSSSVS
Trigger: GGAGACACTGCTGGAGAGAGTCGTACTGGGGAGGCAGCTGGAGCAGCAAGATGCTGTCGAGACCGAAGCCAGGGGAGTCCGAGGTGGACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000566863.1
ENST00000567866.5
ENST00000569829.1
CDS GCA 90 bp GCAGGTCCACCTCGGACTCCCCTGGCTTCGGTCTCGACAGCATCTTaGTGCTCCAGCTGCCTCCCCAGTACGACTCTCTCCAGCAGTGTC +
Preference number: 5 (lower is better)
Translates to: AGPPRTPLASVSTAS*CSSCLPSTTLSSSV
Trigger: GACACTGCTGGAGAGAGTCGTACTGGGGAGGCAGCTGGAGCAGCAAGATGCTGTCGAGACCGAAGCCAGGGGAGTCCGAGGTGGACCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000566863.1
ENST00000567866.5
ENST00000569829.1
CDS GCA 90 bp AGGCCTGAGCCAGCAGAGTCCCTTGCCCACACCGAGGGACCCTGCTaGTTCCTAACGACAGCTGGTCAGAGAAGTCGGCTGCCTCTGGAC +
Preference number: 5 (lower is better)
Translates to: RPEPAESLAHTEGPC*FLTTAGQRSRLPLD
Trigger: GTCCAGAGGCAGCCGACTTCTCTGACCAGCTGTCGTTAGGAAGCAGCAGGGTCCCTCGGTGTGGGCAAGGGACTCTGCTGGCTCAGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS GCA 90 bp TCTTATTCATCCCTGAAATCCGTCCCTCCAGCCCCGCCACCTACGTaGTCCAGGCCTGTCTGGGCGCCGCCATCTTGCCCCGCAGAGATC +
Preference number: 5 (lower is better)
Translates to: SYSSLKSVPPAPPPT*SRPVWAPPSCPAEI
Trigger: GATCTCTGCGGGGCAAGATGGCGGCGCCCAGACAGGCCTGGAGCACGTAGGTGGCGGGGCTGGAGGGACGGATTTCAGGGATGAATAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566863.1
CDS CCA 90 bp TGCATCCTCTCCTGTGTCTGCTGCCGCCGGACAGGGGGCAAGTCCTaGGTCCAGTGGAGCTTCTCCAGCTCGACAGTGTCCATGTGCAGC +
Preference number: 5 (lower is better)
Translates to: CILSCVCCRRTGGKS*VQWSFSSSTVSMCS
Trigger: GCTGCACATGGACACTGTCGAGCTGGAGAAGCTCCACTGGACCCAGGACTTGCCCCCTGTCCGGCGGCAGCAGACACAGGAGAGGATGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000568413.1
CDS CCA 90 bp GCTTTCTGGGCCAGAGCGAGTGCCAGGTACTGCAGGTGGTACTCATaGCGCAGGGCCCATGCAGAGAAAGGTGTGAGGTGTGGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: AFWARASARYCRWYS*RRAHAEKGVRCGAA
Trigger: GGCTGCCCCACACCTCACACCTTTCTCTGCATGGGCCCTGCGCCATGAGTACCACCTGCAGTACCTGGCACTCGCTCTGGCCCAGAAAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS TCA 90 bp CAGCTTCCTCTGGGGGCAAGGCCAGTTCTTGGGGAGCCTCAGCTATaGTGCGGCACAGGCGGCTCCGGAGATCAAAGCTGCTCAACAGCC +
Preference number: 5 (lower is better)
Translates to: QLPLGARPVLGEPQL*CGTGGSGDQSCSTA
Trigger: GGCTGTTGAGCAGCTTTGATCTCCGGAGCCGCCTGTGCCGCATCATAGCTGAGGCTCCCCAAGAACTGGCCTTGCCCCCAGAGGAAGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS GCA 90 bp AGTCGCAGCTTTCGCCGCCCGTTGAAGGGCCGTGCCCGAGATCTATaGACAGAGGAGGCCACAGTTGCTCCCTTACAGACCAAAGGCCCG +
Preference number: 5 (lower is better)
Translates to: SRSFRRPLKGRARDL*TEEATVAPLQTKGP
Trigger: CGGGCCTTTGGTCTGTAAGGGAGCAACTGTGGCCTCCTCTGTGCATAGATCTCGGGCACGGCCCTTCAACGGGCGGCGAAAGCTGCGACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567866.5
CDS CCA 90 bp TCCAGCTGCCTCCCCAGTACGACTCTCTCCAGCAGTGTCTCCGTGTaGGGGTTCCCTCTTATTCATCCGTGCTCCAGGCCTGTCTGGGCG +
Preference number: 5 (lower is better)
Translates to: SSCLPSTTLSSSVSV*GFPLIHPCSRPVWA
Trigger: CGCCCAGACAGGCCTGGAGCACGGATGAATAAGAGGGAACCCCCACACGGAGACACTGCTGGAGAGAGTCGTACTGGGGAGGCAGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000569829.1
CDS CCA 90 bp GCTGGGGGCAAATCTGGGAGATTGTCCAACATCACCACATCCCGATaGTCCTGGAGCGGAGGCCGGTCTGAGTTGGCATCACCACCGCCC +
Preference number: 5 (lower is better)
Translates to: AGGKSGRLSNITTSR*SWSGGRSELASPPP
Trigger: GGGCGGTGGTGATGCCAACTCAGACCGGCCTCCGCTCCAGGACCATCGGGATGTGGTGATGTTGGACAATCTCCCAGATTTGCCCCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000566863.1
ENST00000567866.5
CDS CCA 90 bp AGCGCTGCCGCTTTCTGGGCCAGAGCGAGTGCCAGGTACTGCAGGTaGTACTCATGGCGCAGGGCCCATGCAGAGAAAGGTGTGAGGTGT +
Preference number: 5 (lower is better)
Translates to: SAAAFWARASARYCR*YSWRRAHAEKGVRC
Trigger: ACACCTCACACCTTTCTCTGCATGGGCCCTGCGCCATGAGTACCACCTGCAGTACCTGGCACTCGCTCTGGCCCAGAAAGCGGCAGCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS CCA 90 bp TCTCCAAAACTAGCACCCACTGCAGGACCCGCATGGCTGTGCCCATaGTGTCTGTGGGAGAGAGTCCCGAGGGGGTGTCTGAAGCCCGGT +
Preference number: 5 (lower is better)
Translates to: SPKLAPTAGPAWLCP*CLWERVPRGCLKPG
Trigger: ACCGGGCTTCAGACACCCCCTCGGGACTCTCTCCCACAGACACCATGGGCACAGCCATGCGGGTCCTGCAGTGGGTGCTAGTTTTGGAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS CCA 90 bp AGGGAAAGACGTCAGGCCAGGGAGTCGGCAGTCCAGGTTGAGGTTTaGCAAGACTTGAGGCTGACAGAGCTGGGCGAGGAGGGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: RERRQARESAVQVEV*QDLRLTELGEEGCH
Trigger: GTGGCAGCCCTCCTCGCCCAGCTCTGTCAGCCTCAAGTCTTGCCAAACCTCAACCTGGACTGCCGACTCCCTGGCCTGACGTCTTTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS CCA 90 bp AAGGCCCGCAGGCAGGTTCCAGCAAAGAAACTGGACACGCTACCCTaGGTCCTCCTCCCAGATCACCTGAAATCCGTCCCTCCAGCCCCG +
Preference number: 5 (lower is better)
Translates to: KARRQVPAKKLDTLP*VLLPDHLKSVPPAP
Trigger: CGGGGCTGGAGGGACGGATTTCAGGTGATCTGGGAGGAGGACCCAGGGTAGCGTGTCCAGTTTCTTTGCTGGAACCTGCCTGCGGGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567866.5
CDS TCA 90 bp CACGGCACCCTCTGGTGGGCCCACGTTGGGCACAACTTCCCCAACTaGTGGGCCCTTGGCTTCAGCTATCCTCCTTGCCGCAATTTCCTG +
Preference number: 5 (lower is better)
Translates to: HGTLWWAHVGHNFPN*WALGFSYPPCRNFL
Trigger: CAGGAAATTGCGGCAAGGAGGATAGCTGAAGCCAAGGGCCCATCAGTTGGGGAAGTTGTGCCCAACGTGGGCCCACCAGAGGGTGCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000563293.1
CDS TCA 90 bp CAGCTTCCTCTGGGGGCAAGGCCAGTTCTTGGGGAGCCTCAGCTATaGTGCGGCACAGGCGGCTCCGGAGATCAAAGCTGCTCAACTGGA +
Preference number: 5 (lower is better)
Translates to: QLPLGARPVLGEPQL*CGTGGSGDQSCSTG
Trigger: TCCAGTTGAGCAGCTTTGATCTCCGGAGCCGCCTGTGCCGCATCATAGCTGAGGCTCCCCAAGAACTGGCCTTGCCCCCAGAGGAAGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000561631.1
ENST00000565035.1
CDS TCA 90 bp CAGCCTATCCTCCAGAGCCAGGATCCAATCCCGAGTCGGGACGCGTaGCTGCCCTTACCGCTCAGGTCAAGGGCTCCAGTTAAGCCTCCT +
Preference number: 5 (lower is better)
Translates to: QPILQSQDPIPSRDA*LPLPLRSRAPVKPP
Trigger: AGGAGGCTTAACTGGAGCCCTTGACCTGAGCGGTAAGGGCAGTCACGCGTCCCGACTCGGGATTGGATCCTGGCTCTGGAGGATAGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567866.5
CDS GCA 90 bp GCCCTGCTGATGACCTGGGCTAACACATGCAGTGCCAGTGCTCTCTaGTGGGAAACCTGGCTGCGGGTCAGGTGGAACAGCTCCTGTAGG +
Preference number: 5 (lower is better)
Translates to: ALLMTWANTCSASAL*WETWLRVRWNSSCR
Trigger: CCTACAGGAGCTGTTCCACCTGACCCGCAGCCAGGTTTCCCAGCAGAGAGCACTGGCACTGCATGTGTTAGCCCAGGTCATCAGCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000568413.1
CDS GCA 90 bp CTATCCTCCAGAGCCAGGATCCAATCCCGAGTCGGGACGCGTGACTaGCCTTACCGCTCAGGTCAAGGGCTCCAGTTAAGCCTCCTGGAC +
Preference number: 5 (lower is better)
Translates to: LSSRARIQSRVGTRD*PYRSGQGLQLSLLD
Trigger: GTCCAGGAGGCTTAACTGGAGCCCTTGACCTGAGCGGTAAGGGCAGTCACGCGTCCCGACTCGGGATTGGATCCTGGCTCTGGAGGATAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567866.5
CDS CCA 90 bp GAGAAACTGACTCTGGAAGTGCAGCAGGTCCACCTCGGACTCCCCTaGCTTCGGTCTCGACAGCATCTTGCTGCTCCAGCTGCCTCCCCA +
Preference number: 5 (lower is better)
Translates to: EKLTLEVQQVHLGLP*LRSRQHLAAPAASP
Trigger: TGGGGAGGCAGCTGGAGCAGCAAGATGCTGTCGAGACCGAAGCCAGGGGAGTCCGAGGTGGACCTGCTGCACTTCCAGAGTCAGTTTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000566863.1
ENST00000567866.5
ENST00000569829.1
CDS CCA 90 bp TCCTGTGTCTGCTGCCGCCGGACAGGGGGCAAGTCCTGGGTCCAGTaGAGCTTCTCCAGCTCGACAGTGTCCATGTGCAGCCATTCTTTC +
Preference number: 5 (lower is better)
Translates to: SCVCCRRTGGKSWVQ*SFSSSTVSMCSHSF
Trigger: GAAAGAATGGCTGCACATGGACACTGTCGAGCTGGAGAAGCTCCACTGGACCCAGGACTTGCCCCCTGTCCGGCGGCAGCAGACACAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000568413.1
CDS CCA 90 bp TGCAGTGCCAGTGCTCTCTGCTGGGAAACCTGGCTGCGGGTCAGGTaGAACAGCTCCTGTAGGGAATACCCCGCTCTCTCTGCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: CSASALCWETWLRVR*NSSCREYPALSASS
Trigger: AGAGGAGGCAGAGAGAGCGGGGTATTCCCTACAGGAGCTGTTCCACCTGACCCGCAGCCAGGTTTCCCAGCAGAGAGCACTGGCACTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000568413.1
CDS CCA 90 bp GGCCTGGTAGTAGGCTCCCAGGAACAACAGGCAGGCAACGGGCACTaGGCCCACGGCTCTCCACATCTCAGGTCTGGACAGCAACTTCAA +
Preference number: 5 (lower is better)
Translates to: GLVVGSQEQQAGNGH*AHGSPHLRSGQQLQ
Trigger: TTGAAGTTGCTGTCCAGACCTGAGATGTGGAGAGCCGTGGGCCCAGTGCCCGTTGCCTGCCTGTTGTTCCTGGGAGCCTACTACCAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000565035.1
CDS CCA 90 bp GTCCCTTGCCCACACCGAGGGACCCTGCTGCTTCCTAACGACAGCTaGTCAGAGAAGTCGGCTGCCTCTGGACCCCCTGATGTTCTTTCC +
Preference number: 5 (lower is better)
Translates to: VPCPHRGTLLLPNDS*SEKSAASGPPDVLS
Trigger: GGAAAGAACATCAGGGGGTCCAGAGGCAGCCGACTTCTCTGACCAGCTGTCGTTAGGAAGCAGCAGGGTCCCTCGGTGTGGGCAAGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS CCA 90 bp AGGCTGACAGAGCTGGGCGAGGAGGGCTGCCACCAGATGCTGTACTaGGGACTCCCGGAACAGCTCACTGTCCACCAGGAACACACACAT +
Preference number: 5 (lower is better)
Translates to: RLTELGEEGCHQMLY*GLPEQLTVHQEHTH
Trigger: ATGTGTGTGTTCCTGGTGGACAGTGAGCTGTTCCGGGAGTCCCCAGTACAGCATCTGGTGGCAGCCCTCCTCGCCCAGCTCTGTCAGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS CCA 90 bp CCTCACATCCATGGGAACTCACTGTCCAACATCACCACATCCCGATaGTCCTGGAGCGGAGGCCGGTCTGAGTTGGCATCACCACCGCCC +
Preference number: 5 (lower is better)
Translates to: PHIHGNSLSNITTSR*SWSGGRSELASPPP
Trigger: GGGCGGTGGTGATGCCAACTCAGACCGGCCTCCGCTCCAGGACCATCGGGATGTGGTGATGTTGGACAGTGAGTTCCCATGGATGTGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569829.1
CDS-3UTR CAA 90 bp GAGCTGAAGGAGGGCCAGGTTGTCTTCAGGAGGCACTGTGTAACACTCCAGGGAAGCCAGCAGAGTCCCTaGCCCACACCGAGGGACCCT +
Preference number: 5 (lower is better)
Translates to: ELKEGQVVFRRHCVTLQGSQQSP*PTPRDP
Trigger: AGGGTCCCTCGGTGTGGGCAAGGGACTCTGCTGGCT...TCCCTGGAGTGTTACACAGTGCCTCCTGAAGACAACCTGGCCCTCCTTCAGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CAA 90 bp AACCAGGGTCCGGAAGTAGAGCTGAAGGAGGGCCAGGTTGTCTTCAGGAGGCACTGGGCAGTAGCAGGGTaGGGACTCGCTGTAGCTCCC +
Preference number: 5 (lower is better)
Translates to: NQGPEVELKEGQVVFRRHWAVAG*GLAVAP
Trigger: GGGAGCTACAGCGAGTCCCAACCCTGCTACTGCCCA...GTGCCTCCTGAAGACAACCTGGCCCTCCTTCAGCTCTACTTCCGGACCCTGGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS TCA 90 bp TTCTTCACCAACTGCACTGCTGGGGCTGCACCAGCTGCGAGAAACTaGCTCTGGAAGTGCAGCAGGTCCACCTCGGACTCCCCTGGCTTC +
Preference number: 5 (lower is better)
Translates to: FFTNCTAGAAPAARN*LWKCSRSTSDSPGF
Trigger: GAAGCCAGGGGAGTCCGAGGTGGACCTGCTGCACTTCCAGAGTCAGTTTCTCGCAGCTGGTGCAGCCCCAGCAGTGCAGTTGGTGAAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000566863.1
ENST00000567866.5
ENST00000569829.1
CDS TCA 90 bp ACTGCAGGTGGTACTCATGGCGCAGGGCCCATGCAGAGAAAGGTGTaGGGTGTGGGGCAGCCCCAGGAGCCACACACTGGAGGAAGTAAT +
Preference number: 5 (lower is better)
Translates to: TAGGTHGAGPMQRKV*GVGQPQEPHTGGSN
Trigger: ATTACTTCCTCCAGTGTGTGGCTCCTGGGGCTGCCCCACACCTCACACCTTTCTCTGCATGGGCCCTGCGCCATGAGTACCACCTGCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS GCA 90 bp GCAACCAAGCTGGGGTCAAGCTGGGCCAGCAACCGCTGCTGTTCCTaGAGGATCTCCTCAGGAGCCATGGCCTGCAGTCTTGCTATGTTC +
Preference number: 5 (lower is better)
Translates to: ATKLGSSWASNRCCS*RISSGAMACSLAMF
Trigger: GAACATAGCAAGACTGCAGGCCATGGCTCCTGAGGAGATCCTGCAGGAACAGCAGCGGTTGCTGGCCCAGCTTGACCCCAGCTTGGTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS GCA 90 bp GGGCTAACACATGCAGTGCCAGTGCTCTCTGCTGGGAAACCTGGCTaGGGGTCAGGTGGAACAGCTCCTGTAGGGAATACCCCGCTCTCT +
Preference number: 5 (lower is better)
Translates to: GLTHAVPVLSAGKPG*GSGGTAPVGNTPLS
Trigger: AGAGAGCGGGGTATTCCCTACAGGAGCTGTTCCACCTGACCCGCAGCCAGGTTTCCCAGCAGAGAGCACTGGCACTGCATGTGTTAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000568413.1
CDS CCA 90 bp ACCTGGGCTAACACATGCAGTGCCAGTGCTCTCTGCTGGGAAACCTaGCTGCGGGTCAGGTGGAACAGCTCCTGTAGGGAATACCCCGCT +
Preference number: 5 (lower is better)
Translates to: TWANTCSASALCWET*LRVRWNSSCREYPA
Trigger: AGCGGGGTATTCCCTACAGGAGCTGTTCCACCTGACCCGCAGCCAGGTTTCCCAGCAGAGAGCACTGGCACTGCATGTGTTAGCCCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000568413.1
CDS CCA 90 bp TCACTGATGGTTTCAGCAGGGGTACTGCCGGCTGCCAGGGTTAGCTaGGTGAGGAGAGTGAGCAGTGAGGCTATCCGCTGCATGGACAGG +
Preference number: 5 (lower is better)
Translates to: SLMVSAGVLPAARVS*VRRVSSEAIRCMDR
Trigger: CCTGTCCATGCAGCGGATAGCCTCACTGCTCACTCTCCTCACCCAGCTAACCCTGGCAGCCGGCAGTACCCCTGCTGAAACCATCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000561631.1
ENST00000562303.5
ENST00000565035.1
CDS CCA 90 bp GGCAGGCAACGGGCACTGGGCCCACGGCTCTCCACATCTCAGGTCTaGACAGCAACTTCAAGGTCTGCCTTAGACACGGCTCAACAAGAG +
Preference number: 5 (lower is better)
Translates to: GRQRALGPRLSTSQV*TATSRSALDTAQQE
Trigger: CTCTTGTTGAGCCGTGTCTAAGGCAGACCTTGAAGTTGCTGTCCAGACCTGAGATGTGGAGAGCCGTGGGCCCAGTGCCCGTTGCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000565035.1
CDS TCA 90 bp CAGGAGCCACCAGCAGAGCCCGAAGAGCACGGATGGCGGTTGCAATaGCCCCATCCACTCTGTCATCCAAGGAGAAGCGCAGTAGGAAGA +
Preference number: 5 (lower is better)
Translates to: QEPPAEPEEHGWRLQ*PHPLCHPRRSAVGR
Trigger: TCTTCCTACTGCGCTTCTCCTTGGATGACAGAGTGGATGGGGTCATTGCAACCGCCATCCGTGCTCTTCGGGCTCTGCTGGTGGCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS GCA 90 bp AGGGGTTCCTCCTTGGTGACATTAGCAGAGGGTCCTCCTGGCCTCTaGTCCTCAGAGGCTGTCTCTCCTGTTTGCTCTTGCGTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: RGSSLVTLAEGPPGL*SSEAVSPVCSCVWL
Trigger: CAGCCACACGCAAGAGCAAACAGGAGAGACAGCCTCTGAGGAGCAGAGGCCAGGAGGACCCTCTGCTAATGTCACCAAGGAGGAACCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000568413.1
CDS GCA 90 bp GTTGAAGGGCCGTGCCCGAGATCTATGCACAGAGGAGGCCACAGTTaGTCCCTTACAGACCAAAGGCCCGCAGGCAGGTTCCAGCAAAGA +
Preference number: 5 (lower is better)
Translates to: VEGPCPRSMHRGGHS*SLTDQRPAGRFQQR
Trigger: TCTTTGCTGGAACCTGCCTGCGGGCCTTTGGTCTGTAAGGGAGCAACTGTGGCCTCCTCTGTGCATAGATCTCGGGCACGGCCCTTCAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567866.5
CDS CCA 90 bp CTGGTGGGCCCACGTTGGGCACAACTTCCCCAACTGATGGGCCCTTaGCTTCAGCTATCCTCCTTGCCGCAATTTCCTGGGCAAAGATGC +
Preference number: 5 (lower is better)
Translates to: LVGPRWAQLPQLMGP*LQLSSLPQFPGQRC
Trigger: GCATCTTTGCCCAGGAAATTGCGGCAAGGAGGATAGCTGAAGCCAAGGGCCCATCAGTTGGGGAAGTTGTGCCCAACGTGGGCCCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000563293.1
ENST00000567866.5
CDS CCA 90 bp CTGCTGATGACCTGGGCTAACACATGCAGTGCCAGTGCTCTCTGCTaGGAAACCTGGCTGCGGGTCAGGTGGAACAGCTCCTGTAGGGAA +
Preference number: 5 (lower is better)
Translates to: LLMTWANTCSASALC*ETWLRVRWNSSCRE
Trigger: TTCCCTACAGGAGCTGTTCCACCTGACCCGCAGCCAGGTTTCCCAGCAGAGAGCACTGGCACTGCATGTGTTAGCCCAGGTCATCAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000568413.1
CDS TCA 90 bp GTCCAACATCACCACATCCCGATGGTCCTGGAGCGGAGGCCGGTCTaGGTTGGCATCACCACCGCCCCTATTTCCTTTCTTCACCAACTG +
Preference number: 5 (lower is better)
Translates to: VQHHHIPMVLERRPV*VGITTAPISFLHQL
Trigger: CAGTTGGTGAAGAAAGGAAATAGGGGCGGTGGTGATGCCAACTCAGACCGGCCTCCGCTCCAGGACCATCGGGATGTGGTGATGTTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000566863.1
ENST00000567866.5
ENST00000569829.1
CDS GCA 90 bp CCCACGGCTCTCCACATCTCAGGTCTGGACAGCAACTTCAAGGTCTaGCTTAGACACGGCTCAACAAGAGGCTGGAGCCCAGACACCTGT +
Preference number: 5 (lower is better)
Translates to: PTALHISGLDSNFKV*LRHGSTRGWSPDTC
Trigger: ACAGGTGTCTGGGCTCCAGCCTCTTGTTGAGCCGTGTCTAAGGCAGACCTTGAAGTTGCTGTCCAGACCTGAGATGTGGAGAGCCGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000565035.1
CDS GCA 90 bp AGGAGGTGCTGCCGGAGACCCTCATCTGCCAGCAGCCATGTTTTCTaGAGCATACTCCTGCGGGCAGCTTTGACCTCATCTGAGCTCTGT +
Preference number: 5 (lower is better)
Translates to: RRCCRRPSSASSHVF*SILLRAALTSSELC
Trigger: ACAGAGCTCAGATGAGGTCAAAGCTGCCCGCAGGAGTATGCTGCAGAAAACATGGCTGCTGGCAGATGAGGGTCTCCGGCAGCACCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000561603.5
CDS CCA 90 bp GGCATCACCACCGCCCCTATTTCCTTTCTTCACCAACTGCACTGCTaGGGCTGCACCAGCTGCGAGAAACTGACTCTGGAAGTGCAGCAG +
Preference number: 5 (lower is better)
Translates to: GITTAPISFLHQLHC*GCTSCEKLTLEVQQ
Trigger: CTGCTGCACTTCCAGAGTCAGTTTCTCGCAGCTGGTGCAGCCCCAGCAGTGCAGTTGGTGAAGAAAGGAAATAGGGGCGGTGGTGATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000566863.1
ENST00000567866.5
ENST00000569829.1
CDS CCA 90 bp ACATCACCACATCCCGATGGTCCTGGAGCGGAGGCCGGTCTGAGTTaGCATCACCACCGCCCCTATTTCCTTTCTTCACCAACTGCACTG +
Preference number: 5 (lower is better)
Translates to: TSPHPDGPGAEAGLS*HHHRPYFLSSPTAL
Trigger: CAGTGCAGTTGGTGAAGAAAGGAAATAGGGGCGGTGGTGATGCCAACTCAGACCGGCCTCCGCTCCAGGACCATCGGGATGTGGTGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000566863.1
ENST00000567866.5
ENST00000569829.1
CDS CCA 90 bp GGCAAATCTGGGAGATTGTCCAACATCACCACATCCCGATGGTCCTaGAGCGGAGGCCGGTCTGAGTTGGCATCACCACCGCCCCTATTT +
Preference number: 5 (lower is better)
Translates to: GKSGRLSNITTSRWS*SGGRSELASPPPLF
Trigger: AAATAGGGGCGGTGGTGATGCCAACTCAGACCGGCCTCCGCTCCAGGACCATCGGGATGTGGTGATGTTGGACAATCTCCCAGATTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000566863.1
ENST00000567866.5
CDS CCA 90 bp TCCAGCTGCCTCCCCAGTACGACTCTCTCCAGCAGTGTCTCCGTGTaGGGGTTCCCTCTTATTCATCCATTGCAGCCTATCCTCCAGAGC +
Preference number: 5 (lower is better)
Translates to: SSCLPSTTLSSSVSV*GFPLIHPLQPILQS
Trigger: GCTCTGGAGGATAGGCTGCAATGGATGAATAAGAGGGAACCCCCACACGGAGACACTGCTGGAGAGAGTCGTACTGGGGAGGCAGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567866.5
CDS CCA 90 bp ATCCATGGGAACTCACTGTCCAACATCACCACATCCCGATGGTCCTaGAGCGGAGGCCGGTCTGAGTTGGCATCACCACCGCCCCTATTT +
Preference number: 5 (lower is better)
Translates to: IHGNSLSNITTSRWS*SGGRSELASPPPLF
Trigger: AAATAGGGGCGGTGGTGATGCCAACTCAGACCGGCCTCCGCTCCAGGACCATCGGGATGTGGTGATGTTGGACAGTGAGTTCCCATGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569829.1
CDS CCA 90 bp AGGGGCCCGAGGCTGTACCCTCTCTACTTCTCAGCCTCACATCCATaGGAACTCACTGTCCAACATCACCACATCCCGATGGTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: RGPRLYPLYFSASHP*ELTVQHHHIPMVLE
Trigger: CTCCAGGACCATCGGGATGTGGTGATGTTGGACAGTGAGTTCCCATGGATGTGAGGCTGAGAAGTAGAGAGGGTACAGCCTCGGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569829.1
CDS-3UTR CAA 90 bp ATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCAGGAGGCCGGTCTGAGTaGGCATCACCACCGCCCCTA +
Preference number: 5 (lower is better)
Translates to: MVGLTALKQLKQPAPRKAGGRSE*ASPPPL
Trigger: TAGGGGCGGTGGTGATGCCAACTCAGACCGGCCTCC...TGCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp GAGCTGAAGGAGGGCCAGGTTGTCTTCAGGAGGCACTGTGTAACACTCCAGGGATTCCTGCTCAGCTTCTaGATCCCTGAGCCCCTTCCC +
Preference number: 5 (lower is better)
Translates to: ELKEGQVVFRRHCVTLQGFLLSF*IPEPLP
Trigger: GGGAAGGGGCTCAGGGATCAAGAAGCTGAGCAGGAA...TCCCTGGAGTGTTACACAGTGCCTCCTGAAGACAACCTGGCCCTCCTTCAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CAA 90 bp CTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCCCTCCGGGCATGAGCTaGGTTGCTGGCTCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: LPVQTFRSPRYQDVMVGLPPGMS*VAGSRP
Trigger: AGGCCTGGAGCCAGCAACCAAGCTCATGCCCGGAGG...GAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp GCTAAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGACCTCCGGGCATGAGCTaGGTTGCTGGCTCCAGGCCT +
Preference number: 5 (lower is better)
Translates to: AKPLFTPSTDLQKPQISGPPGMS*VAGSRP
Trigger: AGGCCTGGAGCCAGCAACCAAGCTCATGCCCGGAGG...TCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp CTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCAGCCAGCAGAGTCCCTaGCCCACACCGAGGGACCCT +
Preference number: 5 (lower is better)
Translates to: LRLARHLLKGWIQDNVPISQQSP*PTPRDP
Trigger: AGGGTCCCTCGGTGTGGGCAAGGGACTCTGCTGGCT...GATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS TCA 90 bp TGCTCCTCAGAGGCTGTCTCTCCTGTTTGCTCTTGCGTGTGGCTGTaGGATCTCAAGAAAGCAACCAAGCTGGGGTCAAGCTGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: CSSEAVSPVCSCVWL*DLKKATKLGSSWAS
Trigger: GCTGGCCCAGCTTGACCCCAGCTTGGTTGCTTTCTTGAGATCTCACAGCCACACGCAAGAGCAAACAGGAGAGACAGCCTCTGAGGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS TCA 90 bp AACTCTACAATGAGGAATCATCGAGTCGCAGCTTTCGCCGCCCGTTaGAGGGCCGTGCCCGAGATCTATGCACAGAGGAGGCCACAGTTG +
Preference number: 5 (lower is better)
Translates to: NSTMRNHRVAAFAAR*RAVPEIYAQRRPQL
Trigger: CAACTGTGGCCTCCTCTGTGCATAGATCTCGGGCACGGCCCTTCAACGGGCGGCGAAAGCTGCGACTCGATGATTCCTCATTGTAGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567866.5
CDS GCA 90 bp CCTATTTCCTTTCTTCACCAACTGCACTGCTGGGGCTGCACCAGCTaGGAGAAACTGACTCTGGAAGTGCAGCAGGTCCACCTCGGACTC +
Preference number: 5 (lower is better)
Translates to: PISFLHQLHCWGCTS*EKLTLEVQQVHLGL
Trigger: GAGTCCGAGGTGGACCTGCTGCACTTCCAGAGTCAGTTTCTCGCAGCTGGTGCAGCCCCAGCAGTGCAGTTGGTGAAGAAAGGAAATAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000566863.1
ENST00000567866.5
ENST00000569829.1
CDS GCA 90 bp GTTGGCATCACCACCGCCCCTATTTCCTTTCTTCACCAACTGCACTaGTGGGGCTGCACCAGCTGCGAGAAACTGACTCTGGAAGTGCAG +
Preference number: 5 (lower is better)
Translates to: VGITTAPISFLHQLH*WGCTSCEKLTLEVQ
Trigger: CTGCACTTCCAGAGTCAGTTTCTCGCAGCTGGTGCAGCCCCAGCAGTGCAGTTGGTGAAGAAAGGAAATAGGGGCGGTGGTGATGCCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000566863.1
ENST00000567866.5
ENST00000569829.1
CDS CCA 90 bp GTGTGTCCCGCGAGCGAAGGAACACAGCAGGGAAAGCAACACCACTaGGCACAGGCAGATTCACGGCCACTGAACTTGTATCTCGTTCCT +
Preference number: 5 (lower is better)
Translates to: VCPASEGTQQGKQHH*AQADSRPLNLYLVP
Trigger: AGGAACGAGATACAAGTTCAGTGGCCGTGAATCTGCCTGTGCCCAGTGGTGTTGCTTTCCCTGCTGTGTTCCTTCGCTCGCGGGACACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563293.1
CDS-3UTR CAA 90 bp CTGCTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGTCGTCCTCATCCTCCTaGTCCTCCTGGCTGGGCATC +
Preference number: 5 (lower is better)
Translates to: LLLGLLPTIRTQCSSSGQSSSSS*SSWLGI
Trigger: GATGCCCAGCCAGGAGGACAAGGAGGATGAGGACGA...CTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS GCA 90 bp AGCAACCGCTGCTGTTCCTGCAGGATCTCCTCAGGAGCCATGGCCTaGAGTCTTGCTATGTTCTCTTCATGGATAGTCTGGGCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: SNRCCSCRISSGAMA*SLAMFSSWIVWASC
Trigger: GCAGGAAGCCCAGACTATCCATGAAGAGAACATAGCAAGACTGCAGGCCATGGCTCCTGAGGAGATCCTGCAGGAACAGCAGCGGTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS CCA 90 bp GTGTGTCCCGCGAGCGAAGGAACACAGCAGGGAAAGCAACACCACTaGGCACAGGCAGATTCACGGCCACTGAACTTGTATCTCGTTCAA +
Preference number: 5 (lower is better)
Translates to: VCPASEGTQQGKQHH*AQADSRPLNLYLVQ
Trigger: TTGAACGAGATACAAGTTCAGTGGCCGTGAATCTGCCTGTGCCCAGTGGTGTTGCTTTCCCTGCTGTGTTCCTTCGCTCGCGGGACACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000567866.5
CDS-3UTR CAA 90 bp GAGGTGCTGCCGGAGACCCTCATCTGCCAGCAGCCATGTTTTCTGCAGCATACTCTTCAGCTATCCTCCTaGCCGCAATTTCCTGGGCAA +
Preference number: 5 (lower is better)
Translates to: EVLPETLICQQPCFLQHTLQLSS*PQFPGQ
Trigger: TTGCCCAGGAAATTGCGGCAAGGAGGATAGCTGAAG...AGTATGCTGCAGAAAACATGGCTGCTGGCAGATGAGGGTCTCCGGCAGCACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CAA 90 bp GCTAAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATCTGGTGGGCCCACGTaGGGCACAACTTCCCCAACT +
Preference number: 5 (lower is better)
Translates to: AKPLFTPSTDLQKPQISGSGGPT*GTTSPT
Trigger: AGTTGGGGAAGTTGTGCCCAACGTGGGCCCACCAGA...TCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp CTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCTCTGGTGGGCCCACGTaGGGCACAACTTCCCCAACT +
Preference number: 5 (lower is better)
Translates to: LPVQTFRSPRYQDVMVGLSGGPT*GTTSPT
Trigger: AGTTGGGGAAGTTGTGCCCAACGTGGGCCCACCAGA...GAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp CCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTCGTCCTCATCCTCCTaGTCCTCCTGGCTGGGCATC +
Preference number: 5 (lower is better)
Translates to: PSTDLQKPQISGCNGRAHSSSSS*SSWLGI
Trigger: GATGCCCAGCCAGGAGGACAAGGAGGATGAGGACGA...GTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp CTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACACAGGACAGCGGGTaGCAGAGAAGGGAGCAGTGC +
Preference number: 5 (lower is better)
Translates to: LPVQTFRSPRYQDVMVGLTQDSG*QRREQC
Trigger: GCACTGCTCCCTTCTCTGCAACCCGCTGTCCTGTGT...GAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp CTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATGGGCAGTAGCAGGGTaGGGACTCGCTGTAGCTCCC +
Preference number: 5 (lower is better)
Translates to: LARHLLKGWIQDNVPIFPWAVAG*GLAVAP
Trigger: GGGAGCTACAGCGAGTCCCAACCCTGCTACTGCCCA...TGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS GCA 90 bp CTGCTGTTCCTGCAGGATCTCCTCAGGAGCCATGGCCTGCAGTCTTaGTATGTTCTCTTCATGGATAGTCTGGGCTTCCTGCTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LLFLQDLLRSHGLQS*YVLFMDSLGFLLSF
Trigger: GAAGCTGAGCAGGAAGCCCAGACTATCCATGAAGAGAACATAGCAAGACTGCAGGCCATGGCTCCTGAGGAGATCCTGCAGGAACAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp TTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGGTCTCGACAGCATCTaGCTGCTCCAGCTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: FTPSTDLQKPQISGCNGRGLDSI*LLQLPP
Trigger: GGGAGGCAGCTGGAGCAGCAAGATGCTGTCGAGACC...CCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp CTTCTGCTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCTGGGCCTGGCTCTCTTaGGAGGAGAAGGGACCAAAG +
Preference number: 5 (lower is better)
Translates to: LLLLGLLPTIRTQCSSSGWAWLS*EEKGPK
Trigger: CTTTGGTCCCTTCTCCTCCAAAGAGAGCCAGGCCCA...GCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp CTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATGGGCCTGGCTCTCTTaGGAGGAGAAGGGACCAAAG +
Preference number: 5 (lower is better)
Translates to: LLGLLPTIRTQCSSSGQTWAWLS*EEKGPK
Trigger: CTTTGGTCCCTTCTCCTCCAAAGAGAGCCAGGCCCA...TGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp TTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTCTGGTGGGCCCACGTaGGGCACAACTTCCCCAACT +
Preference number: 5 (lower is better)
Translates to: LVSCLPLGHNVLRLARHLSGGPT*GTTSPT
Trigger: AGTTGGGGAAGTTGTGCCCAACGTGGGCCCACCAGA...CAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp GCTAAGCCACTCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGAGGCTGTCTCTCCTGTTaGCTCTTGCGTGTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: AKPLFTPSTDLQKPQISGGCLSC*LLRVAV
Trigger: CACAGCCACACGCAAGAGCAAACAGGAGAGACAGCC...TCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGAGTGGCTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp TTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGGTAGCCAGGAGCCCCTaGATGACATCATGTCGGGCC +
Preference number: 5 (lower is better)
Translates to: LVSCLPLGHNVLRLARHLVARSP*MTSCRA
Trigger: GGCCCGACATGATGTCATCAAGGGGCTCCTGGCTAC...CAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp CAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCGTAGCCAGGAGCCCCTaGATGACATCATGTCGGGCC +
Preference number: 5 (lower is better)
Translates to: QDVMVGLTALKQLKQPAPVARSP*MTSCRA
Trigger: GGCCCGACATGATGTCATCAAGGGGCTCCTGGCTAC...GGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp ATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCAGGCACTCCAGGACCCTaGTGGCTGATTCCAGGGAAT +
Preference number: 5 (lower is better)
Translates to: MVGLTALKQLKQPAPRKAGTPGP*WLIPGN
Trigger: ATTCCCTGGAATCAGCCACAAGGGTCCTGGAGTGCC...TGCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp CTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAATGGCCACACAGCCCCTaGTGGATCTGGGCCAGGGTA +
Preference number: 5 (lower is better)
Translates to: LLPTIRTQCSSSGQTSVEWPHSP*WIWARV
Trigger: TACCCTGGCCCAGATCCACAAGGGGCTGTGTGGCCA...TTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp TTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGTGGCCACACAGCCCCTaGTGGATCTGGGCCAGGGTA +
Preference number: 5 (lower is better)
Translates to: FTPSTDLQKPQISGCNGRWPHSP*WIWARV
Trigger: TACCCTGGCCCAGATCCACAAGGGGCTGTGTGGCCA...CCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS GCA 90 bp CACACCTTCCTAGGAAGACACTGCAGGCTAGGGAAGAAAGACAGCTaGCATGGGGCCCTGGCTCAAGCTGTGTCATCTTGGGTAAGATAT +
Preference number: 5 (lower is better)
Translates to: HTFLGRHCRLGKKDS*HGALAQAVSSWVRY
Trigger: ATATCTTACCCAAGATGACACAGCTTGAGCCAGGGCCCCATGGCAGCTGTCTTTCTTCCCTAGCCTGCAGTGTCTTCCTAGGAAGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569829.1
CDS-3UTR CAA 90 bp GGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACTGGGCCTGGCTCTCTTaGGAGGAGAAGGGACCAAAG +
Preference number: 5 (lower is better)
Translates to: GHNVLRLARHLLKGWIQDWAWLS*EEKGPK
Trigger: CTTTGGTCCCTTCTCCTCCAAAGAGAGCCAGGCCCA...GTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp AATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCCCAACTGATGGGCCCTaGGCTTCAGCTATCCTCCTT +
Preference number: 5 (lower is better)
Translates to: NGRAHCSKTAQTTCSQEGPTDGP*ASAILL
Trigger: AAGGAGGATAGCTGAAGCCAAGGGCCCATCAGTTGG...GCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp TTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTCCTGCTCAGCTTCTaGATCCCTGAGCCCCTTCCC +
Preference number: 5 (lower is better)
Translates to: LVSCLPLGHNVLRLARHLFLLSF*IPEPLP
Trigger: GGGAAGGGGCTCAGGGATCAAGAAGCTGAGCAGGAA...CAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp GGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCGGCTGTCTCTCCTGTTaGCTCTTGCGTGTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: GQTSVERLDTGQRTHLSIGCLSC*LLRVAV
Trigger: CACAGCCACACGCAAGAGCAAACAGGAGAGACAGCC...GATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp TTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGTCGTCCTCATCCTCCTaGTCCTCCTGGCTGGGCATC +
Preference number: 5 (lower is better)
Translates to: FTPSTDLQKPQISGCNGRSSSSS*SSWLGI
Trigger: GATGCCCAGCCAGGAGGACAAGGAGGATGAGGACGA...CCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp CTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCAGGCACTCCAGGACCCTaGTGGCTGATTCCAGGGAAT +
Preference number: 5 (lower is better)
Translates to: LARHLLKGWIQDNVPIFPGTPGP*WLIPGN
Trigger: ATTCCCTGGAATCAGCCACAAGGGTCCTGGAGTGCC...TGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp GTGCCTGGGTCAATCCCCACTTCTTCCACAAAGCCCAATTTGATCTTTCCCTTCGGCACTCCAGGACCCTaGTGGCTGATTCCAGGGAAT +
Preference number: 5 (lower is better)
Translates to: VPGSIPTSSTKPNLIFPFGTPGP*WLIPGN
Trigger: ATTCCCTGGAATCAGCCACAAGGGTCCTGGAGTGCC...GAAGGGAAAGATCAAATTGGGCTTTGTGGAAGAAGTGGGGATTGACCCAGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CAA 90 bp TCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCACACAGGACAGCGGGTaGCAGAGAAGGGAGCAGTGC +
Preference number: 5 (lower is better)
Translates to: SGCNGRAHCSKTAQTTCSTQDSG*QRREQC
Trigger: GCACTGCTCCCTTCTCTGCAACCCGCTGTCCTGTGT...GGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp TGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCACACAGGACAGCGGGTaGCAGAGAAGGGAGCAGTGC +
Preference number: 5 (lower is better)
Translates to: CLPLGHNVLRLARHLLKGTQDSG*QRREQC
Trigger: GCACTGCTCCCTTCTCTGCAACCCGCTGTCCTGTGT...GCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp CTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACACACCACTGGCCTTGCTaGACACTTACCTCTTCCCCA +
Preference number: 5 (lower is better)
Translates to: LLGLLPTIRTQCSSSGQTHHWPC*TLTSSP
Trigger: TGGGGAAGAGGTAAGTGTCAAGCAAGGCCAGTGGTG...TGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS TCA 90 bp TGCTCCTCAGAGGCTGTCTCTCCTGTTTGCTCTTGCGTGTGGCTGTaGGATCTCAAGAAAGCAACCAAGCTGGGGTCTCTAATTCCAGCT +
Preference number: 5 (lower is better)
Translates to: CSSEAVSPVCSCVWL*DLKKATKLGSLIPA
Trigger: AGCTGGAATTAGAGACCCCAGCTTGGTTGCTTTCTTGAGATCTCACAGCCACACGCAAGAGCAAACAGGAGAGACAGCCTCTGAGGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568413.1
CDS-3UTR CAA 90 bp ATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCGGTCTCGACAGCATCTaGCTGCTCCAGCTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: ISGCNGRAHCSKTAQTTCGLDSI*LLQLPP
Trigger: GGGAGGCAGCTGGAGCAGCAAGATGCTGTCGAGACC...GCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp AGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGGAGGCCGGTCTGAGTaGGCATCACCACCGCCCCTA +
Preference number: 5 (lower is better)
Translates to: RYQDVMVGLTALKQLKQPGGRSE*ASPPPL
Trigger: TAGGGGCGGTGGTGATGCCAACTCAGACCGGCCTCC...AGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp AATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCCTCTCCTGTTTGCTCTaGCGTGTGGCTGTGAGATCT +
Preference number: 5 (lower is better)
Translates to: NGRAHCSKTAQTTCSQEGLSCLL*RVAVRS
Trigger: AGATCTCACAGCCACACGCAAGAGCAAACAGGAGAG...GCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp ATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCAATGAGGGGTTCCTCCTaGGTGACATTAGCAGAGGGT +
Preference number: 5 (lower is better)
Translates to: MVGLTALKQLKQPAPRKAMRGSS*VTLAEG
Trigger: ACCCTCTGCTAATGTCACCAAGGAGGAACCCCTCAT...TGCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp CTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAGGGCAAGGCCAGTTCTaGGGGAGCCTCAGCTATGAT +
Preference number: 5 (lower is better)
Translates to: LLPTIRTQCSSSGQTSVEGQGQF*GSLSYD
Trigger: ATCATAGCTGAGGCTCCCCAAGAACTGGCCTTGCCC...TTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp ATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCCTGCATGGACAGGGGTaGAGGTGGGTGGGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: ISGCNGRAHCSKTAQTTCLHGQG*RWVGAE
Trigger: CTCAGCACCCACCCACCTCAACCCCTGTCCATGCAG...GCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp CAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATCTGCATGGACAGGGGTaGAGGTGGGTGGGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: QTSVERLDTGQRTHLSIYLHGQG*RWVGAE
Trigger: CTCAGCACCCACCCACCTCAACCCCTGTCCATGCAG...ATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp ACATCTGTCCTTCTAGCACAAGGATCAGGGTTAAAGACTACAGAGCAGATGTTGCTGCATGGACAGGGGTaGAGGTGGGTGGGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: TSVLLAQGSGLKTTEQMLLHGQG*RWVGAE
Trigger: CTCAGCACCCACCCACCTCAACCCCTGTCCATGCAG...CAACATCTGCTCTGTAGTCTTTAACCCTGATCCTTGTGCTAGAAGGACAGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CAA 90 bp CTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCCTGGCCAGACATCTGTaGAAAGGCTGGATACAGGAC +
Preference number: 5 (lower is better)
Translates to: LRLARHLLKGWIQDNVPILARHL*KGWIQD
Trigger: GTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAG...GATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGACGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS CCA 90 bp ACTGATGGGCCCTTGGCTTCAGCTATCCTCCTTGCCGCAATTTCCTaGGCAAAGATGCTTCTCTTACCAGATGTTGCTGATTTCCCCTGT +
Preference number: 5 (lower is better)
Translates to: TDGPLASAILLAAIS*AKMLLLPDVADFPC
Trigger: ACAGGGGAAATCAGCAACATCTGGTAAGAGAAGCATCTTTGCCCAGGAAATTGCGGCAAGGAGGATAGCTGAAGCCAAGGGCCCATCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000563293.1
ENST00000567866.5
CDS-3UTR CAA 90 bp AGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGGTCTCGACAGCATCTaGCTGCTCCAGCTGCCTCCC +
Preference number: 5 (lower is better)
Translates to: RYQDVMVGLTALKQLKQPGLDSI*LLQLPP
Trigger: GGGAGGCAGCTGGAGCAGCAAGATGCTGTCGAGACC...AGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp GCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGAAGGCAAGCCTTCTGGCAAATCTGGGAGATaGTCCAACATCACCACATCC +
Preference number: 5 (lower is better)
Translates to: AHCSKTAQTTCSQEGKPSGKSGR*SNITTS
Trigger: GGATGTGGTGATGTTGGACAATCTCCCAGATTTGCC...AGAAGGCTTGCCTTCCTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp TTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGCTTCAGCTATCCTCCTaGCCGCAATTTCCTGGGCAA +
Preference number: 5 (lower is better)
Translates to: LVSCLPLGHNVLRLARHLLQLSS*PQFPGQ
Trigger: TTGCCCAGGAAATTGCGGCAAGGAGGATAGCTGAAG...CAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp TCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCCAACTGATGGGCCCTaGGCTTCAGCTATCCTCCTT +
Preference number: 5 (lower is better)
Translates to: SGCNGRAHCSKTAQTTCSPTDGP*ASAILL
Trigger: AAGGAGGATAGCTGAAGCCAAGGGCCCATCAGTTGG...GGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp CTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGCCAACTGATGGGCCCTaGGCTTCAGCTATCCTCCTT +
Preference number: 5 (lower is better)
Translates to: LPLGHNVLRLARHLLKGWPTDGP*ASAILL
Trigger: AAGGAGGATAGCTGAAGCCAAGGGCCCATCAGTTGG...CCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp TCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCTCCTGTTTGCTCTaGCGTGTGGCTGTGAGATCT +
Preference number: 5 (lower is better)
Translates to: SLPVQTFRSPRYQDVMVGLSCLL*RVAVRS
Trigger: AGATCTCACAGCCACACGCAAGAGCAAACAGGAGAG...CCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp GGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTATGAGGGGTTCCTCCTaGGTGACATTAGCAGAGGGT +
Preference number: 5 (lower is better)
Translates to: GLLPTIRTQCSSSGQTSVMRGSS*VTLAEG
Trigger: ACCCTCTGCTAATGTCACCAAGGAGGAACCCCTCAT...AACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp ACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAAGGGCAAGGCCAGTTCTaGGGGAGCCTCAGCTATGAT +
Preference number: 5 (lower is better)
Translates to: TFRSPRYQDVMVGLTALKGQGQF*GSLSYD
Trigger: ATCATAGCTGAGGCTCCCCAAGAACTGGCCTTGCCC...TTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp TCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGGCAAGGCCAGTTCTaGGGGAGCCTCAGCTATGAT +
Preference number: 5 (lower is better)
Translates to: SCLPLGHNVLRLARHLLKGQGQF*GSLSYD
Trigger: ATCATAGCTGAGGCTCCCCAAGAACTGGCCTTGCCC...TTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp GGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTCTGGCCAGACATCTGTaGAAAGGCTGGATACAGGAC +
Preference number: 5 (lower is better)
Translates to: GLLPTIRTQCSSSGQTSVLARHL*KGWIQD
Trigger: GTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAG...AACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp TCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCCAAGCCTTCTGCTCCTaGGTCTCCTGCCTACCATTA +
Preference number: 5 (lower is better)
Translates to: SGQTSVERLDTGQRTHLSQAFCS*VSCLPL
Trigger: TAATGGTAGGCAGGAGACCAAGGAGCAGAAGGCTTG...GGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp TCTGGCCAGACATCTGTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCGGCAAATCTGGGAGATaGTCCAACATCACCACATCC +
Preference number: 5 (lower is better)
Translates to: SGQTSVERLDTGQRTHLSGKSGR*SNITTS
Trigger: GGATGTGGTGATGTTGGACAATCTCCCAGATTTGCC...GGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp GGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCAGGGCAAATCTGGGAGATaGTCCAACATCACCACATCC +
Preference number: 5 (lower is better)
Translates to: GCNGRAHCSKTAQTTCSQGKSGR*SNITTS
Trigger: GGATGTGGTGATGTTGGACAATCTCCCAGATTTGCC...CTGGGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp AGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATATCAACTATCCTAGGTTCCTGCTCAGCTTCTaGATCCCTGAGCCCCTTCCC +
Preference number: 5 (lower is better)
Translates to: RLDTGQRTHLSIYINYPRFLLSF*IPEPLP
Trigger: GGGAAGGGGCTCAGGGATCAAGAAGCTGAGCAGGAA...CCTAGGATAGTTGATATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp GGACAACGTACCCATCTTTCCATCTATATCAACTATCCTAGGTCTCTGATACCCGGCTGTCTCTCCTGTTaGCTCTTGCGTGTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: GQRTHLSIYINYPRSLIPGCLSC*LLRVAV
Trigger: CACAGCCACACGCAAGAGCAAACAGGAGAGACAGCC...GGGTATCAGAGACCTAGGATAGTTGATATAGATGGAAAGATGGGTACGTTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp ACATTTATTTTAATGCACAACTATAGCATTCATATGCCTCAGCCCAGGGCAGGGGTAGCCAGGAGCCCCTaGATGACATCATGTCGGGCC +
Preference number: 5 (lower is better)
Translates to: TFILMHNYSIHMPQPRAGVARSP*MTSCRA
Trigger: GGCCCGACATGATGTCATCAAGGGGCTCCTGGCTAC...CCCTGCCCTGGGCTGAGGCATATGAATGCTATAGTTGTGCATTAAAATAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp GTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATATCAACTATTGGCCACACAGCCCCTaGTGGATCTGGGCCAGGGTA +
Preference number: 5 (lower is better)
Translates to: VERLDTGQRTHLSIYINYWPHSP*WIWARV
Trigger: TACCCTGGCCCAGATCCACAAGGGGCTGTGTGGCCA...ATAGTTGATATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp ATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCGAGGTTTGGCAAGACTaGAGGCTGACAGAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: ISGCNGRAHCSKTAQTTCEVWQD*RLTELG
Trigger: GCCCAGCTCTGTCAGCCTCAAGTCTTGCCAAACCTC...GCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR CAA 90 bp CTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGCAAGCCTTCTGCTCCTaGGTCTCCTGCCTACCATTA +
Preference number: 5 (lower is better)
Translates to: LPLGHNVLRLARHLLKGWQAFCS*VSCLPL
Trigger: TAATGGTAGGCAGGAGACCAAGGAGCAGAAGGCTTG...CCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS TCA 90 bp CTTGTATCTCGTTCAATAATCTTAGTCAAGACAGCAGTGATGTGCTaGTCATGCCTCCTCAGCCTCTCTTCTGGGTCCTCATCCTCAGGC +
Preference number: 5 (lower is better)
Translates to: LVSRSIILVKTAVMC*SCLLSLSSGSSSSG
Trigger: GCCTGAGGATGAGGACCCAGAAGAGAGGCTGAGGAGGCATGATCAGCACATCACTGCTGTCTTGACTAAGATTATTGAACGAGATACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000566863.1
ENST00000567866.5
CDS CCA 90 bp GTATCTCGTTCCTGTAGCAACAAAGCACAAAGTTGTGAAGCACAATaGAGAAACTTCCCCAGGCTGGACCCGATCCTATTAGCCCAGTTC +
Preference number: 5 (lower is better)
Translates to: VSRSCSNKAQSCEAQ*RNFPRLDPILLAQF
Trigger: GAACTGGGCTAATAGGATCGGGTCCAGCCTGGGGAAGTTTCTCCATTGTGCTTCACAACTTTGTGCTTTGTTGCTACAGGAACGAGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563293.1
CDS-3UTR CAA 90 bp CTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGGTAGCACAGGGTACTTaGTATAGACTAGGGGTAGGC +
Preference number: 5 (lower is better)
Translates to: LPLGHNVLRLARHLLKGWVAQGT*YRLGVG
Trigger: GCCTACCCCTAGTCTATACAAAGTACCCTGTGCTAC...CCAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp TCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCGTAGCACAGGGTACTTaGTATAGACTAGGGGTAGGC +
Preference number: 5 (lower is better)
Translates to: SGCNGRAHCSKTAQTTCSVAQGT*YRLGVG
Trigger: GCCTACCCCTAGTCTATACAAAGTACCCTGTGCTAC...GGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp CCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGGTAGCACAGGGTACTTaGTATAGACTAGGGGTAGGC +
Preference number: 5 (lower is better)
Translates to: PTIRTQCSSSGQTSVERLVAQGT*YRLGVG
Trigger: GCCTACCCCTAGTCTATACAAAGTACCCTGTGCTAC...CAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp TTTATTTTAATGCACAACTATAGCATTCATATGCCTCAGCCCAGGGCAGGGGTTGAGGTTTGGCAAGACTaGAGGCTGACAGAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: FILMHNYSIHMPQPRAGVEVWQD*RLTELG
Trigger: GCCCAGCTCTGTCAGCCTCAAGTCTTGCCAAACCTC...AACCCCTGCCCTGGGCTGAGGCATATGAATGCTATAGTTGTGCATTAAAATAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000562303.5
CDS-3UTR CAA 90 bp ACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACTGGCCAGACATCTGTaGAAAGGCTGGATACAGGAC +
Preference number: 5 (lower is better)
Translates to: TFRSPRYQDVMVGLTALKLARHL*KGWIQD
Trigger: GTCCTGTATCCAGCCTTTCAACAGATGTCTGGCCAG...TTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp TCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTGCTCCCCCTCCTTCTGCCCTTaGTCATGCTCCTTTTGCTTA +
Preference number: 5 (lower is better)
Translates to: SGCNGRAHCSKTAQTTCSPSFCP*SCSFCL
Trigger: TAAGCAAAAGGAGCATGACAAAGGGCAGAAGGAGGG...GGAGCAGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CAA 90 bp CTGCTCCTTGGTCTCCTGCCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGTTAAAAAGCATGAAATaGGCCATGTGTAGTGGGCCA +
Preference number: 5 (lower is better)
Translates to: LLLGLLPTIRTQCSSSGQLKSMK*AMCSGP
Trigger: TGGCCCACTACACATGGCCAATTTCATGCTTTTTAA...CTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGGCAGGAGACCAAGGAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CAA 90 bp CTTCAGAAGCCCCAGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACATACCCACCACTGGCCTaGCTTGACACTTACCTCTTC +
Preference number: 5 (lower is better)
Translates to: LQKPQISGCNGRAHCSKTYPPLA*LDTYLF
Trigger: GAAGAGGTAAGTGTCAAGCAAGGCCAGTGGTGGGTA...TGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCTGGGGCTTCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CAA 90 bp AGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATATCAACTATCCTAGGCTCTCCTGTTTGCTCTaGCGTGTGGCTGTGAGATCT +
Preference number: 5 (lower is better)
Translates to: RLDTGQRTHLSIYINYPRLSCLL*RVAVRS
Trigger: AGATCTCACAGCCACACGCAAGAGCAAACAGGAGAG...CCTAGGATAGTTGATATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp CCTACCATTAGGACACAATGTTCTTCGTCTGGCCAGACATCTGTTGAAAGGCTGTTCTCTTACCAGATGTaGCTGATTTCCCCTGTGTGT +
Preference number: 5 (lower is better)
Translates to: PTIRTQCSSSGQTSVERLFSYQM*LISPVC
Trigger: ACACACAGGGGAAATCAGCAACATCTGGTAAGAGAA...CAGCCTTTCAACAGATGTCTGGCCAGACGAAGAACATTGTGTCCTAATGGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp ACATTTATTTTAATGCACAACTATAGCATTCATATGCCTCAGCCCAGGGCAGGGCTTCAGCTATCCTCCTaGCCGCAATTTCCTGGGCAA +
Preference number: 5 (lower is better)
Translates to: TFILMHNYSIHMPQPRAGLQLSS*PQFPGQ
Trigger: TTGCCCAGGAAATTGCGGCAAGGAGGATAGCTGAAG...CCCTGCCCTGGGCTGAGGCATATGAATGCTATAGTTGTGCATTAAAATAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp AACATCTGTCCTTCTAGCACAAGGATCAGGGTTAAAGACTACAGAGCAGATGTTATGAGGGGTTCCTCCTaGGTGACATTAGCAGAGGGT +
Preference number: 5 (lower is better)
Translates to: NICPSSTRIRVKDYRADVMRGSS*VTLAEG
Trigger: ACCCTCTGCTAATGTCACCAAGGAGGAACCCCTCAT...AACATCTGCTCTGTAGTCTTTAACCCTGATCCTTGTGCTAGAAGGACAGATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS-3UTR CAA 90 bp TCTTCACTCCCAGTACAGACCTTCAGAAGCCCCAGATATCAGGATGTAATGGTATTCTCTTACCAGATGTaGCTGATTTCCCCTGTGTGT +
Preference number: 5 (lower is better)
Translates to: SSLPVQTFRSPRYQDVMVFSYQM*LISPVC
Trigger: ACACACAGGGGAAATCAGCAACATCTGGTAAGAGAA...TACCATTACATCCTGATATCTGGGGCTTCTGAAGGTCTGTACTGGGAGTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp GTTGAAAGGCTGGATACAGGACAACGTACCCATCTTTCCATCTATATCAACTATCAAGCCTTCTGCTCCTaGGTCTCCTGCCTACCATTA +
Preference number: 5 (lower is better)
Translates to: VERLDTGQRTHLSIYINYQAFCS*VSCLPL
Trigger: TAATGGTAGGCAGGAGACCAAGGAGCAGAAGGCTTG...ATAGTTGATATAGATGGAAAGATGGGTACGTTGTCCTGTATCCAGCCTTTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp AGATATCAGGATGTAATGGTAGGGCTCACTGCTCTAAAACAGCTCAAACAACCTTTCTCTTACCAGATGTaGCTGATTTCCCCTGTGTGT +
Preference number: 5 (lower is better)
Translates to: RYQDVMVGLTALKQLKQPFSYQM*LISPVC
Trigger: ACACACAGGGGAAATCAGCAACATCTGGTAAGAGAA...AGGTTGTTTGAGCTGTTTTAGAGCAGTGAGCCCTACCATTACATCCTGATATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS-3UTR CAA 90 bp CTTTCCATCTATATCAACTATCCTAGGTCTCTGATACCCCATTTTGGAGCACTGGTTAAGCCCTTTTCATaGATTCTCTTAATCCCCTCA +
Preference number: 5 (lower is better)
Translates to: LSIYINYPRSLIPHFGALVKPFS*ILLIPS
Trigger: TGAGGGGATTAAGAGAATCAATGAAAAGGGCTTAAC...CAGTGCTCCAAAATGGGGTATCAGAGACCTAGGATAGTTGATATAGATGGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS GCA 72 bp TCCCTGAAATCCGTCCCTCCAGCCCCGCCACCTACGTaGTCCAGGCCTGTCTGGGCGCCGCCATCTTGCCCC +
Preference number: 6 (lower is better)
Translates to: SLKSVPPAPPPT*SRPVWAPPSCP
Trigger: GGGGCAAGATGGCGGCGCCCAGACAGGCCTGGAGCACGTAGGTGGCGGGGCTGGAGGGACGGATTTCAGGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566863.1
CDS CCA 72 bp GTTGGGACTCGCTGTAGCTCCCCTCGGTGCAGAGCCTaGGAGGCCAGCAGACTGGCTCGGGCTGGCGAGCAA +
Preference number: 6 (lower is better)
Translates to: VGTRCSSPRCRA*EASRLARAGEQ
Trigger: TTGCTCGCCAGCCCGAGCCAGTCTGCTGGCCTCCCAGGCTCTGCACCGAGGGGAGCTACAGCGAGTCCCAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS GCA 72 bp AGTAGCAGGGTTGGGACTCGCTGTAGCTCCCCTCGGTaGAGAGCCTGGGAGGCCAGCAGACTGGCTCGGGCT +
Preference number: 6 (lower is better)
Translates to: SSRVGTRCSSPR*RAWEASRLARA
Trigger: AGCCCGAGCCAGTCTGCTGGCCTCCCAGGCTCTGCACCGAGGGGAGCTACAGCGAGTCCCAACCCTGCTACT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS CCA 72 bp CTCCCGCGGCACCACCTGCAAGGCCCGCATCAGCACTaGGTAGAGCTCCCTGTAAAGGTAACCGCCCTGGCC +
Preference number: 6 (lower is better)
Translates to: LPRHHLQGPHQH*VELPVKVTALA
Trigger: GGCCAGGGCGGTTACCTTTACAGGGAGCTCTACCCAGTGCTGATGCGGGCCTTGCAGGTGGTGCCGCGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000561631.1
ENST00000562303.5
ENST00000565035.1
CDS GCA 72 bp GCTGCCGCTTTCTGGGCCAGAGCGAGTGCCAGGTACTaGAGGTGGTACTCATGGCGCAGGGCCCATGCAGAG +
Preference number: 6 (lower is better)
Translates to: AAAFWARASARY*RWYSWRRAHAE
Trigger: CTCTGCATGGGCCCTGCGCCATGAGTACCACCTGCAGTACCTGGCACTCGCTCTGGCCCAGAAAGCGGCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS GCA 72 bp GGGCTGGCGAGCAATGAGTCAGGTAGCAGTTGCGGATaGTGGGGAGGTCCTGGCAGGCCTGAGCCAGCAGAG +
Preference number: 6 (lower is better)
Translates to: GLASNESGSSCG*WGGPGRPEPAE
Trigger: CTCTGCTGGCTCAGGCCTGCCAGGACCTCCCCAGCATCCGCAACTGCTACCTGACTCATTGCTCGCCAGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS GCA 72 bp TGGCTCGGGCTGGCGAGCAATGAGTCAGGTAGCAGTTaGGGATGCTGGGGAGGTCCTGGCAGGCCTGAGCCA +
Preference number: 6 (lower is better)
Translates to: WLGLASNESGSS*GCWGGPGRPEP
Trigger: TGGCTCAGGCCTGCCAGGACCTCCCCAGCATCCGCAACTGCTACCTGACTCATTGCTCGCCAGCCCGAGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS CCA 72 bp CTGCCTCCTCTCCATGGTGGTGCAGACCCAGGTGGGTaGGCAGGTCCACGTCAGGGGCCAGTAGTTCTCCCT +
Preference number: 6 (lower is better)
Translates to: LPPLHGGADPGG*AGPRQGPVVLP
Trigger: AGGGAGAACTACTGGCCCCTGACGTGGACCTGCCCACCCACCTGGGTCTGCACCACCATGGAGAGGAGGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000568413.1
CDS CCA 72 bp ACTGCAGGACCCGCATGGCTGTGCCCATGGTGTCTGTaGGAGAGAGTCCCGAGGGGGTGTCTGAAGCCCGGT +
Preference number: 6 (lower is better)
Translates to: TAGPAWLCPWCL*ERVPRGCLKPG
Trigger: ACCGGGCTTCAGACACCCCCTCGGGACTCTCTCCCACAGACACCATGGGCACAGCCATGCGGGTCCTGCAGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS TCA 72 bp CTGGGGGCAAGGCCAGTTCTTGGGGAGCCTCAGCTATaGTGCGGCACAGGCGGCTCCGGAGATCAAAGCTGC +
Preference number: 6 (lower is better)
Translates to: LGARPVLGEPQL*CGTGGSGDQSC
Trigger: GCAGCTTTGATCTCCGGAGCCGCCTGTGCCGCATCATAGCTGAGGCTCCCCAAGAACTGGCCTTGCCCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000561631.1
ENST00000562303.5
ENST00000565035.1
CDS TCA 72 bp GGTACTCATGGCGCAGGGCCCATGCAGAGAAAGGTGTaGGGTGTGGGGCAGCCCCAGGAGCCACACACTGGA +
Preference number: 6 (lower is better)
Translates to: GTHGAGPMQRKV*GVGQPQEPHTG
Trigger: TCCAGTGTGTGGCTCCTGGGGCTGCCCCACACCTCACACCTTTCTCTGCATGGGCCCTGCGCCATGAGTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS GCA 72 bp CGGACTCCCCTGGCTTCGGTCTCGACAGCATCTTGCTaGTCCAGCTGCCTCCCCAGTACGACTCTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: RTPLASVSTASC*SSCLPSTTLSS
Trigger: GCTGGAGAGAGTCGTACTGGGGAGGCAGCTGGAGCAGCAAGATGCTGTCGAGACCGAAGCCAGGGGAGTCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000566863.1
ENST00000567866.5
ENST00000569829.1
CDS GCA 72 bp CCTCGGACTCCCCTGGCTTCGGTCTCGACAGCATCTTaGTGCTCCAGCTGCCTCCCCAGTACGACTCTCTCC +
Preference number: 6 (lower is better)
Translates to: PRTPLASVSTAS*CSSCLPSTTLS
Trigger: GGAGAGAGTCGTACTGGGGAGGCAGCTGGAGCAGCAAGATGCTGTCGAGACCGAAGCCAGGGGAGTCCGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000566863.1
ENST00000567866.5
ENST00000569829.1
CDS GCA 72 bp GCAACCAAGCTGGGGTCAAGCTGGGCCAGCAACCGCTaGTGTTCCTGCAGGATCTCCTCAGGAGCCATGGCC +
Preference number: 6 (lower is better)
Translates to: ATKLGSSWASNR*CSCRISSGAMA
Trigger: GGCCATGGCTCCTGAGGAGATCCTGCAGGAACAGCAGCGGTTGCTGGCCCAGCTTGACCCCAGCTTGGTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS GCA 72 bp TCAGGACTGCCCCCGAGGCCCAGTGCAGGGTACCCTTaGAGGTCCTGCTGGGCTGAGAAAGTACCTGGGTCA +
Preference number: 6 (lower is better)
Translates to: SGLPPRPSAGYP*RSCWAEKVPGS
Trigger: TGACCCAGGTACTTTCTCAGCCCAGCAGGACCTGCAAGGGTACCCTGCACTGGGCCTCGGGGGCAGTCCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000562303.5
CDS CCA 72 bp GAGCACAGCCAGGATGTCAAGGACCACCGCAGGTCCTaGGTATGTCACCTCCAGCACGTAGCGCAGCCGAGG +
Preference number: 6 (lower is better)
Translates to: EHSQDVKDHRRS*VCHLQHVAQPR
Trigger: CCTCGGCTGCGCTACGTGCTGGAGGTGACATACCCAGGACCTGCGGTGGTCCTTGACATCCTGGCTGTGCTC
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS CCA 72 bp GTAGGCTCCCAGGAACAACAGGCAGGCAACGGGCACTaGGCCCACGGCTCTCCACATCTCAGGTCTGGACAG +
Preference number: 6 (lower is better)
Translates to: VGSQEQQAGNGH*AHGSPHLRSGQ
Trigger: CTGTCCAGACCTGAGATGTGGAGAGCCGTGGGCCCAGTGCCCGTTGCCTGCCTGTTGTTCCTGGGAGCCTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000565035.1
CDS CCA 72 bp GGCAGCAGCAGCTCCTCTGACAGGCGCTGCATGTCCTaGAGCCAATCCTCCGGGCATGAGCTTGGTTGCTGG +
Preference number: 6 (lower is better)
Translates to: GSSSSSDRRCMS*SQSSGHELGCW
Trigger: CCAGCAACCAAGCTCATGCCCGGAGGATTGGCTCCAGGACATGCAGCGCCTGTCAGAGGAGCTGCTGCTGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000564934.1
CDS CCA 72 bp CATACCATGATAGAGGGCAGCATGGGTGGCTGGCAGTaGCTGCAGCGCTGCCGCTTTCTGGGCCAGAGCGAG +
Preference number: 6 (lower is better)
Translates to: HTMIEGSMGGWQ*LQRCRFLGQSE
Trigger: CTCGCTCTGGCCCAGAAAGCGGCAGCGCTGCAGCCACTGCCAGCCACCCATGCTGCCCTCTATCATGGTATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS CCA 72 bp CTGGCGAGCAATGAGTCAGGTAGCAGTTGCGGATGCTaGGGAGGTCCTGGCAGGCCTGAGCCAGCAGAGTCC +
Preference number: 6 (lower is better)
Translates to: LASNESGSSCGC*GGPGRPEPAES
Trigger: GGACTCTGCTGGCTCAGGCCTGCCAGGACCTCCCCAGCATCCGCAACTGCTACCTGACTCATTGCTCGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS CCA 72 bp GTGCAGAGCCTGGGAGGCCAGCAGACTGGCTCGGGCTaGCGAGCAATGAGTCAGGTAGCAGTTGCGGATGCT +
Preference number: 6 (lower is better)
Translates to: VQSLGGQQTGSG*RAMSQVAVADA
Trigger: AGCATCCGCAACTGCTACCTGACTCATTGCTCGCCAGCCCGAGCCAGTCTGCTGGCCTCCCAGGCTCTGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS CAA 90 bp CTCGGTGCTCAGCATCTCAGCTTCCTCTGGGGGCAAGGCCAGTTCTaGGGGAGCCTCAGCTATGATGCGGCACAGGCGGCTCCGGAGATC +
Preference number: 6 (lower is better)
Translates to: LGAQHLSFLWGQGQF*GSLSYDAAQAAPEI
Trigger: GATCTCCGGAGCCGCCTGTGCCGCATCATAGCTGAGGCTCCCCAAGAACTGGCCTTGCCCCCAGAGGAAGCTGAGATGCTGAGCACCGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000561631.1
ENST00000562303.5
ENST00000565035.1
CDS CAA 90 bp CGTCAGGCCAGGGAGTCGGCAGTCCAGGTTGAGGTTTGGCAAGACTaGAGGCTGACAGAGCTGGGCGAGGAGGGCTGCCACCAGATGCTG +
Preference number: 6 (lower is better)
Translates to: RQARESAVQVEVWQD*RLTELGEEGCHQML
Trigger: CAGCATCTGGTGGCAGCCCTCCTCGCCCAGCTCTGTCAGCCTCAAGTCTTGCCAAACCTCAACCTGGACTGCCGACTCCCTGGCCTGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS CAA 90 bp AGCAGGTCCACCTCGGACTCCCCTGGCTTCGGTCTCGACAGCATCTaGCTGCTCCAGCTGCCTCCCCAGTACGACTCTCTCCAGCAGTGT +
Preference number: 6 (lower is better)
Translates to: SRSTSDSPGFGLDSI*LLQLPPQYDSLQQC
Trigger: ACACTGCTGGAGAGAGTCGTACTGGGGAGGCAGCTGGAGCAGCAAGATGCTGTCGAGACCGAAGCCAGGGGAGTCCGAGGTGGACCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000566863.1
ENST00000567866.5
ENST00000569829.1
CDS TCA 72 bp CCAGCCGGAATACACAGCTCAGCAGCAGCTCATGGGTaGGGTACTCACTTCCGGGCAGCAGCCGGCTCAGCA +
Preference number: 6 (lower is better)
Translates to: PAGIHSSAAAHG*GTHFRAAAGSA
Trigger: TGCTGAGCCGGCTGCTGCCCGGAAGTGAGTACCTCACCCATGAGCTGCTGCTGAGCTGTGTATTCCGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS TCA 72 bp CTCCAGAGCCAGGATCCAATCCCGAGTCGGGACGCGTaGCTGCCCTTACCGCTCAGGTCAAGGGCTCCAGTT +
Preference number: 6 (lower is better)
Translates to: LQSQDPIPSRDA*LPLPLRSRAPV
Trigger: AACTGGAGCCCTTGACCTGAGCGGTAAGGGCAGTCACGCGTCCCGACTCGGGATTGGATCCTGGCTCTGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567866.5
CDS GCA 72 bp CCAGCAGAGTCCCTTGCCCACACCGAGGGACCCTGCTaGTTCCTAACGACAGCTGGTCAGAGAAGTCGGCTG +
Preference number: 6 (lower is better)
Translates to: PAESLAHTEGPC*FLTTAGQRSRL
Trigger: CAGCCGACTTCTCTGACCAGCTGTCGTTAGGAAGCAGCAGGGTCCCTCGGTGTGGGCAAGGGACTCTGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS GCA 72 bp GAGCCAGCAGAGTCCCTTGCCCACACCGAGGGACCCTaGTGCTTCCTAACGACAGCTGGTCAGAGAAGTCGG +
Preference number: 6 (lower is better)
Translates to: EPAESLAHTEGP*CFLTTAGQRSR
Trigger: CCGACTTCTCTGACCAGCTGTCGTTAGGAAGCAGCAGGGTCCCTCGGTGTGGGCAAGGGACTCTGCTGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS GCA 72 bp CAAGACTTGAGGCTGACAGAGCTGGGCGAGGAGGGCTaGCACCAGATGCTGTACTGGGGACTCCCGGAACAG +
Preference number: 6 (lower is better)
Translates to: QDLRLTELGEEG*HQMLYWGLPEQ
Trigger: CTGTTCCGGGAGTCCCCAGTACAGCATCTGGTGGCAGCCCTCCTCGCCCAGCTCTGTCAGCCTCAAGTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS GCA 72 bp ATCGAGTCGCAGCTTTCGCCGCCCGTTGAAGGGCCGTaGCCGAGATCTATGCACAGAGGAGGCCACAGTTGC +
Preference number: 6 (lower is better)
Translates to: IESQLSPPVEGP*PRSMHRGGHSC
Trigger: GCAACTGTGGCCTCCTCTGTGCATAGATCTCGGGCACGGCCCTTCAACGGGCGGCGAAAGCTGCGACTCGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567866.5
CDS CCA 72 bp GTTTCAGCAGGGGTACTGCCGGCTGCCAGGGTTAGCTaGGTGAGGAGAGTGAGCAGTGAGGCTATCCGCTGC +
Preference number: 6 (lower is better)
Translates to: VSAGVLPAARVS*VRRVSSEAIRC
Trigger: GCAGCGGATAGCCTCACTGCTCACTCTCCTCACCCAGCTAACCCTGGCAGCCGGCAGTACCCCTGCTGAAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000561631.1
ENST00000562303.5
ENST00000565035.1
CDS CCA 72 bp CCACACCGAGGGACCCTGCTGCTTCCTAACGACAGCTaGTCAGAGAAGTCGGCTGCCTCTGGACCCCCTGAT +
Preference number: 6 (lower is better)
Translates to: PHRGTLLLPNDS*SEKSAASGPPD
Trigger: ATCAGGGGGTCCAGAGGCAGCCGACTTCTCTGACCAGCTGTCGTTAGGAAGCAGCAGGGTCCCTCGGTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS CCA 72 bp CGTCAGGCCAGGGAGTCGGCAGTCCAGGTTGAGGTTTaGCAAGACTTGAGGCTGACAGAGCTGGGCGAGGAG +
Preference number: 6 (lower is better)
Translates to: RQARESAVQVEV*QDLRLTELGEE
Trigger: CTCCTCGCCCAGCTCTGTCAGCCTCAAGTCTTGCCAAACCTCAACCTGGACTGCCGACTCCCTGGCCTGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS CAA 72 bp ACCTCGGACTCCCCTGGCTTCGGTCTCGACAGCATCTaGCTGCTCCAGCTGCCTCCCCAGTACGACTCTCTC +
Preference number: 6 (lower is better)
Translates to: TSDSPGFGLDSI*LLQLPPQYDSL
Trigger: GAGAGAGTCGTACTGGGGAGGCAGCTGGAGCAGCAAGATGCTGTCGAGACCGAAGCCAGGGGAGTCCGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000566863.1
ENST00000567866.5
ENST00000569829.1
CDS CAA 72 bp CAGCATCTCAGCTTCCTCTGGGGGCAAGGCCAGTTCTaGGGGAGCCTCAGCTATGATGCGGCACAGGCGGCT +
Preference number: 6 (lower is better)
Translates to: QHLSFLWGQGQF*GSLSYDAAQAA
Trigger: AGCCGCCTGTGCCGCATCATAGCTGAGGCTCCCCAAGAACTGGCCTTGCCCCCAGAGGAAGCTGAGATGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000561631.1
ENST00000562303.5
ENST00000565035.1
CDS CAA 72 bp AGGGAGTCGGCAGTCCAGGTTGAGGTTTGGCAAGACTaGAGGCTGACAGAGCTGGGCGAGGAGGGCTGCCAC +
Preference number: 6 (lower is better)
Translates to: RESAVQVEVWQD*RLTELGEEGCH
Trigger: GTGGCAGCCCTCCTCGCCCAGCTCTGTCAGCCTCAAGTCTTGCCAAACCTCAACCTGGACTGCCGACTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS TCA 72 bp AACTGCACTGCTGGGGCTGCACCAGCTGCGAGAAACTaGCTCTGGAAGTGCAGCAGGTCCACCTCGGACTCC +
Preference number: 6 (lower is better)
Translates to: NCTAGAAPAARN*LWKCSRSTSDS
Trigger: GGAGTCCGAGGTGGACCTGCTGCACTTCCAGAGTCAGTTTCTCGCAGCTGGTGCAGCCCCAGCAGTGCAGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000566863.1
ENST00000567866.5
ENST00000569829.1
CDS TCA 72 bp CATGGTGTCTGTGGGAGAGAGTCCCGAGGGGGTGTCTaGAGCCCGGTGGTAGAGGCGAATCAGTGGCAGGAA +
Preference number: 6 (lower is better)
Translates to: HGVCGRESRGGV*SPVVEANQWQE
Trigger: TTCCTGCCACTGATTCGCCTCTACCACCGGGCTTCAGACACCCCCTCGGGACTCTCTCCCACAGACACCATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000562303.5
ENST00000565167.1
CDS GCA 72 bp CCGTGCCCGAGATCTATGCACAGAGGAGGCCACAGTTaGTCCCTTACAGACCAAAGGCCCGCAGGCAGGTTC +
Preference number: 6 (lower is better)
Translates to: PCPRSMHRGGHS*SLTDQRPAGRF
Trigger: GAACCTGCCTGCGGGCCTTTGGTCTGTAAGGGAGCAACTGTGGCCTCCTCTGTGCATAGATCTCGGGCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567866.5
CDS GCA 72 bp TTTCGCCGCCCGTTGAAGGGCCGTGCCCGAGATCTATaGACAGAGGAGGCCACAGTTGCTCCCTTACAGACC +
Preference number: 6 (lower is better)
Translates to: FRRPLKGRARDL*TEEATVAPLQT
Trigger: GGTCTGTAAGGGAGCAACTGTGGCCTCCTCTGTGCATAGATCTCGGGCACGGCCCTTCAACGGGCGGCGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567866.5
CDS GCA 72 bp AGAGCCAGGATCCAATCCCGAGTCGGGACGCGTGACTaGCCTTACCGCTCAGGTCAAGGGCTCCAGTTAAGC +
Preference number: 6 (lower is better)
Translates to: RARIQSRVGTRD*PYRSGQGLQLS
Trigger: GCTTAACTGGAGCCCTTGACCTGAGCGGTAAGGGCAGTCACGCGTCCCGACTCGGGATTGGATCCTGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567866.5
CDS CCA 72 bp ACTCTGGAAGTGCAGCAGGTCCACCTCGGACTCCCCTaGCTTCGGTCTCGACAGCATCTTGCTGCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: TLEVQQVHLGLP*LRSRQHLAAPA
Trigger: AGCTGGAGCAGCAAGATGCTGTCGAGACCGAAGCCAGGGGAGTCCGAGGTGGACCTGCTGCACTTCCAGAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000566863.1
ENST00000567866.5
ENST00000569829.1
CDS CCA 72 bp GGGAGATTGTCCAACATCACCACATCCCGATGGTCCTaGAGCGGAGGCCGGTCTGAGTTGGCATCACCACCG +
Preference number: 6 (lower is better)
Translates to: GRLSNITTSRWS*SGGRSELASPP
Trigger: CGGTGGTGATGCCAACTCAGACCGGCCTCCGCTCCAGGACCATCGGGATGTGGTGATGTTGGACAATCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000566863.1
ENST00000567866.5
CDS CCA 72 bp ACCTGGGCTAACACATGCAGTGCCAGTGCTCTCTGCTaGGAAACCTGGCTGCGGGTCAGGTGGAACAGCTCC +
Preference number: 6 (lower is better)
Translates to: TWANTCSASALC*ETWLRVRWNSS
Trigger: GGAGCTGTTCCACCTGACCCGCAGCCAGGTTTCCCAGCAGAGAGCACTGGCACTGCATGTGTTAGCCCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000568413.1
CDS CCA 72 bp TCCCCAAACTCACCAGCCTGGGCCCTGCTGATGACCTaGGCTAACACATGCAGTGCCAGTGCTCTCTGCTGG +
Preference number: 6 (lower is better)
Translates to: SPNSPAWALLMT*ANTCSASALCW
Trigger: CCAGCAGAGAGCACTGGCACTGCATGTGTTAGCCCAGGTCATCAGCAGGGCCCAGGCTGGTGAGTTTGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000568413.1
CDS CCA 72 bp GCCAGAGCGAGTGCCAGGTACTGCAGGTGGTACTCATaGCGCAGGGCCCATGCAGAGAAAGGTGTGAGGTGT +
Preference number: 6 (lower is better)
Translates to: ARASARYCRWYS*RRAHAEKGVRC
Trigger: ACACCTCACACCTTTCTCTGCATGGGCCCTGCGCCATGAGTACCACCTGCAGTACCTGGCACTCGCTCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS CCA 72 bp AACTCCAGCCGGAATACACAGCTCAGCAGCAGCTCATaGGTGAGGTACTCACTTCCGGGCAGCAGCCGGCTC +
Preference number: 6 (lower is better)
Translates to: NSSRNTQLSSSS*VRYSLPGSSRL
Trigger: GAGCCGGCTGCTGCCCGGAAGTGAGTACCTCACCCATGAGCTGCTGCTGAGCTGTGTATTCCGGCTGGAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS CAA 72 bp GCCGTGCCCGAGATCTATGCACAGAGGAGGCCACAGTaGCTCCCTTACAGACCAAAGGCCCGCAGGCAGGTT +
Preference number: 6 (lower is better)
Translates to: AVPEIYAQRRPQ*LPYRPKARRQV
Trigger: AACCTGCCTGCGGGCCTTTGGTCTGTAAGGGAGCAACTGTGGCCTCCTCTGTGCATAGATCTCGGGCACGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567866.5
CDS TCA 72 bp GTGGGCAGGTCCACGTCAGGGGCCAGTAGTTCTCCCTaGAGACTGAATCGAGCCTGCATCCTCTCCTGTGTC +
Preference number: 6 (lower is better)
Translates to: VGRSTSGASSSP*RLNRACILSCV
Trigger: GACACAGGAGAGGATGCAGGCTCGATTCAGTCTTCAGGGAGAACTACTGGCCCCTGACGTGGACCTGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000568413.1
CDS TCA 72 bp CCAGCAGAGCCCGAAGAGCACGGATGGCGGTTGCAATaGCCCCATCCACTCTGTCATCCAAGGAGAAGCGCA +
Preference number: 6 (lower is better)
Translates to: PAEPEEHGWRLQ*PHPLCHPRRSA
Trigger: TGCGCTTCTCCTTGGATGACAGAGTGGATGGGGTCATTGCAACCGCCATCCGTGCTCTTCGGGCTCTGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS TCA 72 bp ATGAGGAATCATCGAGTCGCAGCTTTCGCCGCCCGTTaGAGGGCCGTGCCCGAGATCTATGCACAGAGGAGG +
Preference number: 6 (lower is better)
Translates to: MRNHRVAAFAAR*RAVPEIYAQRR
Trigger: CCTCCTCTGTGCATAGATCTCGGGCACGGCCCTTCAACGGGCGGCGAAAGCTGCGACTCGATGATTCCTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567866.5
CDS GCA 72 bp CATGCAGTGCCAGTGCTCTCTGCTGGGAAACCTGGCTaGGGGTCAGGTGGAACAGCTCCTGTAGGGAATACC +
Preference number: 6 (lower is better)
Translates to: HAVPVLSAGKPG*GSGGTAPVGNT
Trigger: GGTATTCCCTACAGGAGCTGTTCCACCTGACCCGCAGCCAGGTTTCCCAGCAGAGAGCACTGGCACTGCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000568413.1
CDS GCA 72 bp ATGACCTGGGCTAACACATGCAGTGCCAGTGCTCTCTaGTGGGAAACCTGGCTGCGGGTCAGGTGGAACAGC +
Preference number: 6 (lower is better)
Translates to: MTWANTCSASAL*WETWLRVRWNS
Trigger: GCTGTTCCACCTGACCCGCAGCCAGGTTTCCCAGCAGAGAGCACTGGCACTGCATGTGTTAGCCCAGGTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000568413.1
CDS CCA 72 bp CTCCCCAGTACGACTCTCTCCAGCAGTGTCTCCGTGTaGGGGTTCCCTCTTATTCATCCGTGCTCCAGGCCT +
Preference number: 6 (lower is better)
Translates to: LPSTTLSSSVSV*GFPLIHPCSRP
Trigger: AGGCCTGGAGCACGGATGAATAAGAGGGAACCCCCACACGGAGACACTGCTGGAGAGAGTCGTACTGGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000569829.1
CDS CCA 72 bp AGTGCTCTCTGCTGGGAAACCTGGCTGCGGGTCAGGTaGAACAGCTCCTGTAGGGAATACCCCGCTCTCTCT +
Preference number: 6 (lower is better)
Translates to: SALCWETWLRVR*NSSCREYPALS
Trigger: AGAGAGAGCGGGGTATTCCCTACAGGAGCTGTTCCACCTGACCCGCAGCCAGGTTTCCCAGCAGAGAGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000568413.1
CDS CCA 72 bp AACTCACTGTCCAACATCACCACATCCCGATGGTCCTaGAGCGGAGGCCGGTCTGAGTTGGCATCACCACCG +
Preference number: 6 (lower is better)
Translates to: NSLSNITTSRWS*SGGRSELASPP
Trigger: CGGTGGTGATGCCAACTCAGACCGGCCTCCGCTCCAGGACCATCGGGATGTGGTGATGTTGGACAGTGAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569829.1
CDS CAA 90 bp TCTGGTGGGCCCACGTTGGGCACAACTTCCCCAACTGATGGGCCCTaGGCTTCAGCTATCCTCCTTGCCGCAATTTCCTGGGCAAAGATG +
Preference number: 6 (lower is better)
Translates to: SGGPTLGTTSPTDGP*ASAILLAAISWAKM
Trigger: CATCTTTGCCCAGGAAATTGCGGCAAGGAGGATAGCTGAAGCCAAGGGCCCATCAGTTGGGGAAGTTGTGCCCAACGTGGGCCCACCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000563293.1
ENST00000567866.5
CDS CAA 90 bp CTCTTCCTGGGCTCACTGGCAAAAGCTGACATGAGGGGTTCCTCCTaGGTGACATTAGCAGAGGGTCCTCCTGGCCTCTGCTCCTCAGAG +
Preference number: 6 (lower is better)
Translates to: LFLGSLAKADMRGSS*VTLAEGPPGLCSSE
Trigger: CTCTGAGGAGCAGAGGCCAGGAGGACCCTCTGCTAATGTCACCAAGGAGGAACCCCTCATGTCAGCTTTTGCCAGTGAGCCCAGGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000568413.1
CDS CCA 72 bp CCACGTTGGGCACAACTTCCCCAACTGATGGGCCCTTaGCTTCAGCTATCCTCCTTGCCGCAATTTCCTGGG +
Preference number: 6 (lower is better)
Translates to: PRWAQLPQLMGP*LQLSSLPQFPG
Trigger: CCCAGGAAATTGCGGCAAGGAGGATAGCTGAAGCCAAGGGCCCATCAGTTGGGGAAGTTGTGCCCAACGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000563293.1
ENST00000567866.5
CDS CCA 72 bp AACACATGCAGTGCCAGTGCTCTCTGCTGGGAAACCTaGCTGCGGGTCAGGTGGAACAGCTCCTGTAGGGAA +
Preference number: 6 (lower is better)
Translates to: NTCSASALCWET*LRVRWNSSCRE
Trigger: TTCCCTACAGGAGCTGTTCCACCTGACCCGCAGCCAGGTTTCCCAGCAGAGAGCACTGGCACTGCATGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000568413.1
CDS CCA 72 bp AGGCACCCCACACTTACCTGGCCACACAGCCCCTTGTaGATCTGGGCCAGGGTATTAAGAAGAGAGAGGAGG +
Preference number: 6 (lower is better)
Translates to: RHPTLTWPHSPL*IWARVLRRERR
Trigger: CCTCCTCTCTCTTCTTAATACCCTGGCCCAGATCCACAAGGGGCTGTGTGGCCAGGTAAGTGTGGGGTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000564934.1
CDS CCA 72 bp CATGGGAACTCACTGTCCAACATCACCACATCCCGATaGTCCTGGAGCGGAGGCCGGTCTGAGTTGGCATCA +
Preference number: 6 (lower is better)
Translates to: HGNSLSNITTSR*SWSGGRSELAS
Trigger: TGATGCCAACTCAGACCGGCCTCCGCTCCAGGACCATCGGGATGTGGTGATGTTGGACAGTGAGTTCCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569829.1
CDS CAA 72 bp CCCACGTTGGGCACAACTTCCCCAACTGATGGGCCCTaGGCTTCAGCTATCCTCCTTGCCGCAATTTCCTGG +
Preference number: 6 (lower is better)
Translates to: PTLGTTSPTDGP*ASAILLAAISW
Trigger: CCAGGAAATTGCGGCAAGGAGGATAGCTGAAGCCAAGGGCCCATCAGTTGGGGAAGTTGTGCCCAACGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000563293.1
ENST00000567866.5
CDS CAA 72 bp GGCTCACTGGCAAAAGCTGACATGAGGGGTTCCTCCTaGGTGACATTAGCAGAGGGTCCTCCTGGCCTCTGC +
Preference number: 6 (lower is better)
Translates to: GSLAKADMRGSS*VTLAEGPPGLC
Trigger: GCAGAGGCCAGGAGGACCCTCTGCTAATGTCACCAAGGAGGAACCCCTCATGTCAGCTTTTGCCAGTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000568413.1
CDS CAA 72 bp AATGAGGAATCATCGAGTCGCAGCTTTCGCCGCCCGTaGAAGGGCCGTGCCCGAGATCTATGCACAGAGGAG +
Preference number: 6 (lower is better)
Translates to: NEESSSRSFRRP*KGRARDLCTEE
Trigger: CTCCTCTGTGCATAGATCTCGGGCACGGCCCTTCAACGGGCGGCGAAAGCTGCGACTCGATGATTCCTCATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567866.5
CDS CAA 90 bp AACATCACCACATCCCGATGGTCCTGGAGCGGAGGCCGGTCTGAGTaGGCATCACCACCGCCCCTATTTCCTTTCTTCACCAACTGCACT +
Preference number: 6 (lower is better)
Translates to: NITTSRWSWSGGRSE*ASPPPLFPFFTNCT
Trigger: AGTGCAGTTGGTGAAGAAAGGAAATAGGGGCGGTGGTGATGCCAACTCAGACCGGCCTCCGCTCCAGGACCATCGGGATGTGGTGATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000566863.1
ENST00000567866.5
ENST00000569829.1
CDS CAA 90 bp CAACTCTACAATGAGGAATCATCGAGTCGCAGCTTTCGCCGCCCGTaGAAGGGCCGTGCCCGAGATCTATGCACAGAGGAGGCCACAGTT +
Preference number: 6 (lower is better)
Translates to: QLYNEESSSRSFRRP*KGRARDLCTEEATV
Trigger: AACTGTGGCCTCCTCTGTGCATAGATCTCGGGCACGGCCCTTCAACGGGCGGCGAAAGCTGCGACTCGATGATTCCTCATTGTAGAGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567866.5
CDS GCA 72 bp ACCACCGCCCCTATTTCCTTTCTTCACCAACTGCACTaGTGGGGCTGCACCAGCTGCGAGAAACTGACTCTG +
Preference number: 6 (lower is better)
Translates to: TTAPISFLHQLH*WGCTSCEKLTL
Trigger: CAGAGTCAGTTTCTCGCAGCTGGTGCAGCCCCAGCAGTGCAGTTGGTGAAGAAAGGAAATAGGGGCGGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000566863.1
ENST00000567866.5
ENST00000569829.1
CDS GCA 72 bp AGAGGAAACCAGCATCCAAAAGGAGGCTTAAGACACTaGCTGCTAGCCGGTCCCCAAACTCACCAGCCTGGG +
Preference number: 6 (lower is better)
Translates to: RGNQHPKGGLRH*LLAGPQTHQPG
Trigger: CCCAGGCTGGTGAGTTTGGGGACCGGCTAGCAGGCAGTGTCTTAAGCCTCCTTTTGGATGCTGGTTTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS GCA 72 bp TGCCGGAGACCCTCATCTGCCAGCAGCCATGTTTTCTaGAGCATACTCCTGCGGGCAGCTTTGACCTCATCT +
Preference number: 6 (lower is better)
Translates to: CRRPSSASSHVF*SILLRAALTSS
Trigger: AGATGAGGTCAAAGCTGCCCGCAGGAGTATGCTGCAGAAAACATGGCTGCTGGCAGATGAGGGTCTCCGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304330.9
ENST00000561603.5
CDS CCA 72 bp GGGCCTGGCTCTCTTTGGAGGAGAAGGGACCAAAGCTaGGGGCAAATCTGGGAGATTGTCCAACATCACCAC +
Preference number: 6 (lower is better)
Translates to: GPGSLWRRRDQS*GQIWEIVQHHH
Trigger: GTGGTGATGTTGGACAATCTCCCAGATTTGCCCCCAGCTTTGGTCCCTTCTCCTCCAAAGAGAGCCAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000566863.1
ENST00000567866.5
CDS CCA 72 bp TCCTGGCTGGGCATCAGAGGGAACGTCAAAGCTCCATaGTACCAAGAGAAGGTGCTGTCGAGGAGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: SWLGIRGNVKAP*YQEKVLSRSSS
Trigger: TGAGGAGCTCCTCGACAGCACCTTCTCTTGGTACCATGGAGCTTTGACGTTCCCTCTGATGCCCAGCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS CAA 90 bp GAGGCCAGGACACGAAGTAGTTTCATGGCAGTAGCACAGGGTACTTaGTATAGACTAGGGGTAGGCCCTGCCCCCACAGGAGACCAACTG +
Preference number: 6 (lower is better)
Translates to: EARTRSSFMAVAQGT*YRLGVGPAPTGDQL
Trigger: CAGTTGGTCTCCTGTGGGGGCAGGGCCTACCCCTAGTCTATACAAAGTACCCTGTGCTACTGCCATGAAACTACTTCGTGTCCTGGCCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS CCA 72 bp AAATCTGGGAGATTGTCCAACATCACCACATCCCGATaGTCCTGGAGCGGAGGCCGGTCTGAGTTGGCATCA +
Preference number: 6 (lower is better)
Translates to: KSGRLSNITTSR*SWSGGRSELAS
Trigger: TGATGCCAACTCAGACCGGCCTCCGCTCCAGGACCATCGGGATGTGGTGATGTTGGACAATCTCCCAGATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000566863.1
ENST00000567866.5
CDS CCA 72 bp GCGAGCGAAGGAACACAGCAGGGAAAGCAACACCACTaGGCACAGGCAGATTCACGGCCACTGAACTTGTAT +
Preference number: 6 (lower is better)
Translates to: ASEGTQQGKQHH*AQADSRPLNLY
Trigger: ATACAAGTTCAGTGGCCGTGAATCTGCCTGTGCCCAGTGGTGTTGCTTTCCCTGCTGTGTTCCTTCGCTCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000563293.1
ENST00000567866.5
CDS CCA 72 bp GAGCCCCTTGATGACATCATGTCGGGCCAGGTCAGGTaGAGGCCGGCTTTCTTCTTCAGGGCTTTTCCTTTT +
Preference number: 6 (lower is better)
Translates to: EPLDDIMSGQVR*RPAFFFRAFPF
Trigger: AAAAGGAAAAGCCCTGAAGAAGAAAGCCGGCCTCCACCTGACCTGGCCCGACATGATGTCATCAAGGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS CCA 72 bp CTCCCCAGTACGACTCTCTCCAGCAGTGTCTCCGTGTaGGGGTTCCCTCTTATTCATCCATTGCAGCCTATC +
Preference number: 6 (lower is better)
Translates to: LPSTTLSSSVSV*GFPLIHPLQPI
Trigger: GATAGGCTGCAATGGATGAATAAGAGGGAACCCCCACACGGAGACACTGCTGGAGAGAGTCGTACTGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567866.5
CDS TCA 72 bp GAGGCTGTCTCTCCTGTTTGCTCTTGCGTGTGGCTGTaGGATCTCAAGAAAGCAACCAAGCTGGGGTCAAGC +
Preference number: 6 (lower is better)
Translates to: EAVSPVCSCVWL*DLKKATKLGSS
Trigger: GCTTGACCCCAGCTTGGTTGCTTTCTTGAGATCTCACAGCCACACGCAAGAGCAAACAGGAGAGACAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS CAA 72 bp CCCCAACTGATGGGCCCTTGGCTTCAGCTATCCTCCTaGCCGCAATTTCCTGGGCAAAGATGCTTCTCTTAC +
Preference number: 6 (lower is better)
Translates to: PQLMGPWLQLSS*PQFPGQRCFSY
Trigger: GTAAGAGAAGCATCTTTGCCCAGGAAATTGCGGCAAGGAGGATAGCTGAAGCCAAGGGCCCATCAGTTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000563293.1
ENST00000567866.5
CDS TCA 72 bp GAGATCAAAGCTGCTCAACTGGAAATGGGCACAGTCTaGGGATCAGGGTCAGCTGTGAGTCTCAAGTCCAGC +
Preference number: 6 (lower is better)
Translates to: EIKAAQLEMGTV*GSGSAVSLKSS
Trigger: GCTGGACTTGAGACTCACAGCTGACCCTGATCCTCAGACTGTGCCCATTTCCAGTTGAGCAGCTTTGATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000561631.1
CDS TCA 72 bp GAGGCTGTCTCTCCTGTTTGCTCTTGCGTGTGGCTGTaGGATCTCAAGAAAGCAACCAAGCTGGGGTCTCTA +
Preference number: 6 (lower is better)
Translates to: EAVSPVCSCVWL*DLKKATKLGSL
Trigger: TAGAGACCCCAGCTTGGTTGCTTTCTTGAGATCTCACAGCCACACGCAAGAGCAAACAGGAGAGACAGCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568413.1
CDS GCA 72 bp TGCTGTTCCTGCAGGATCTCCTCAGGAGCCATGGCCTaGAGTCTTGCTATGTTCTCTTCATGGATAGTCTGG +
Preference number: 6 (lower is better)
Translates to: CCSCRISSGAMA*SLAMFSSWIVW
Trigger: CCAGACTATCCATGAAGAGAACATAGCAAGACTGCAGGCCATGGCTCCTGAGGAGATCCTGCAGGAACAGCA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS CAA 72 bp ACACGAAGTAGTTTCATGGCAGTAGCACAGGGTACTTaGTATAGACTAGGGGTAGGCCCTGCCCCCACAGGA +
Preference number: 6 (lower is better)
Translates to: TRSSFMAVAQGT*YRLGVGPAPTG
Trigger: TCCTGTGGGGGCAGGGCCTACCCCTAGTCTATACAAAGTACCCTGTGCTACTGCCATGAAACTACTTCGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS CAA 90 bp GCACAACTTCCCCAACTGATGGGCCCTTGGCTTCAGCTATCCTCCTaGCCGCAATTTCCTGGGCAAAGATGCTTCTCTTACCAGATGTTG +
Preference number: 6 (lower is better)
Translates to: AQLPQLMGPWLQLSS*PQFPGQRCFSYQML
Trigger: CAACATCTGGTAAGAGAAGCATCTTTGCCCAGGAAATTGCGGCAAGGAGGATAGCTGAAGCCAAGGGCCCATCAGTTGGGGAAGTTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000563293.1
ENST00000567866.5
CDS CAA 90 bp TGCTATGTTCTCTTCATGGATAGTCTGGGCTTCCTGCTCAGCTTCTaGATCCCTGAGCCCCTTCCCTGTGACCAGATTGGGTCCCTGAAA +
Preference number: 6 (lower is better)
Translates to: CYVLFMDSLGFLLSF*IPEPLPCDQIGSLK
Trigger: TTTCAGGGACCCAATCTGGTCACAGGGAAGGGGCTCAGGGATCAAGAAGCTGAGCAGGAAGCCCAGACTATCCATGAAGAGAACATAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
CDS CAA 72 bp CAATTTCCTGGGCAAAGATGCTTCTCTTACCAGATGTaGCTGATTTCCCCTGTGTGTCCCGCGAGCGAAGGA +
Preference number: 6 (lower is better)
Translates to: QFPGQRCFSYQM*LISPVCPASEG
Trigger: TCCTTCGCTCGCGGGACACACAGGGGAAATCAGCAACATCTGGTAAGAGAAGCATCTTTGCCCAGGAAATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000563293.1
ENST00000567866.5
CDS GCA 72 bp CAGCTATCCTCCTTGCCGCAATTTCCTGGGCAAAGATaGTTCTCTTACCAGATGTTGCTGATTTCCCCTGTG +
Preference number: 6 (lower is better)
Translates to: QLSSLPQFPGQR*FSYQMLLISPV
Trigger: CACAGGGGAAATCAGCAACATCTGGTAAGAGAAGCATCTTTGCCCAGGAAATTGCGGCAAGGAGGATAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000563293.1
ENST00000567866.5
CDS CCA 72 bp CCCTTGGCTTCAGCTATCCTCCTTGCCGCAATTTCCTaGGCAAAGATGCTTCTCTTACCAGATGTTGCTGAT +
Preference number: 6 (lower is better)
Translates to: PLASAILLAAIS*AKMLLLPDVAD
Trigger: ATCAGCAACATCTGGTAAGAGAAGCATCTTTGCCCAGGAAATTGCGGCAAGGAGGATAGCTGAAGCCAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000304330.9
ENST00000561603.5
ENST00000562303.5
ENST00000563293.1
ENST00000567866.5
CDS CAA 90 bp GAAGAAAGACAGCTGCCATGGGGCCCTGGCTCAAGCTGTGTCATCTaGGGTAAGATATTTAACCTCTTTGAGCCTCATTTTCTTCCTCTG +
Preference number: 6 (lower is better)
Translates to: EERQLPWGPGSSCVI*GKIFNLFEPHFLPL
Trigger: CAGAGGAAGAAAATGAGGCTCAAAGAGGTTAAATATCTTACCCAAGATGACACAGCTTGAGCCAGGGCCCCATGGCAGCTGTCTTTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569829.1
CDS CCA 72 bp TCCTGTAGCAACAAAGCACAAAGTTGTGAAGCACAATaGAGAAACTTCCCCAGGCTGGACCCGATCCTATTA +
Preference number: 6 (lower is better)
Translates to: SCSNKAQSCEAQ*RNFPRLDPILL
Trigger: TAATAGGATCGGGTCCAGCCTGGGGAAGTTTCTCCATTGTGCTTCACAACTTTGTGCTTTGTTGCTACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563293.1
CDS TCA 72 bp AAAATGGGGCTGCAGAAACACAGGCTATGCAGTGTCTaGAATAATAATGATGTGTCTGAATCCAACCACAAC +
Preference number: 6 (lower is better)
Translates to: KMGLQKHRLCSV*NNNDVSESNHN
Trigger: GTTGTGGTTGGATTCAGACACATCATTATTATTTCAGACACTGCATAGCCTGTGTTTCTGCAGCCCCATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569829.1