RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RPAIN (Homo sapiens)

Ensembl gene IDs: ENSG00000129197

Ensembl transcript IDs: ENST00000327154.10, ENST00000381208.9, ENST00000381209.8, ENST00000405578.8, ENST00000536255.6, ENST00000539417.6, ENST00000570883.5, ENST00000571043.5, ENST00000571558.5, ENST00000571613.5, ENST00000572174.5, ENST00000573126.1, ENST00000573577.5, ENST00000574003.1, ENST00000575112.5, ENST00000575599.5, ENST00000575711.1

Found 413 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCCTCCTCCAGGAAGGTGTCACCATAAAGGAGATCACCCTCCTCTaGACTCCCATAAGCCCTCCTTGTACAGCTCTCCAGGGTACTGCC +
Preference number: 1 (lower is better)
Translates to: CLLQEGVTIKEITLL*TPISPPCTALQGTA
Trigger: GGCAGTACCCTGGAGAGCTGTACAAGGAGGGCTTATGGGAGTTCAGAGGAGGGTGATCTCCTTTATGGTGACACCTTCCTGGAGGAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
3UTR TCA 90 bp CAGGTAACTACAACACTGTTACAGGTGACATGGCATGAGGTACGGTaGAAGCCCAAGGAGAGACTGGCCAGTTCCCCTCTGCCAGCCCTC +
Preference number: 1 (lower is better)
Translates to: QVTTTLLQVTWHEVR*KPKERLASSPLPAL
Trigger: GAGGGCTGGCAGAGGGGAACTGGCCAGTCTCTCCTTGGGCTTTCACCGTACCTCATGCCATGTCACCTGTAACAGTGTTGTAGTTACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
3UTR GCA 90 bp TGCTGCCCTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTaGCAGCATGGCCTATCTGGGTCTTATGACTATGAAATGACCAGC +
Preference number: 1 (lower is better)
Translates to: CCPAMLLPCFLPQKW*QHGLSGSYDYEMTS
Trigger: GCTGGTCATTTCATAGTCATAAGACCCAGATAGGCCATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAGGGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
3UTR GCA 90 bp CCCCCACAACTCACCAGATCTCCATGTCTGTCCAGATCGATTCCATaGTTCAAGGCCAAGTTAAATGCCTCCTCCAGGAAGGTGTCACCA +
Preference number: 1 (lower is better)
Translates to: PPQLTRSPCLSRSIP*FKAKLNASSRKVSP
Trigger: TGGTGACACCTTCCTGGAGGAGGCATTTAACTTGGCCTTGAAGCATGGAATCGATCTGGACAGACATGGAGATCTGGTGAGTTGTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575112.5
3UTR TCA 90 bp GGCTCCTCAGAGGGAATGAGTTGTCTTCAACCCCATAGAATGATGTaGGTCCAAGCTGGCTCTAGAGGATCACAGCCCAAGTATCACAGG +
Preference number: 1 (lower is better)
Translates to: GSSEGMSCLQPHRMM*VQAGSRGSQPKYHR
Trigger: CCTGTGATACTTGGGCTGTGATCCTCTAGAGCCAGCTTGGACTCACATCATTCTATGGGGTTGAAGACAACTCATTCCCTCTGAGGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000573577.5
ENST00000575599.5
3UTR GCA 90 bp CCTCCAGTGACTGAAAATTCAGGTGTGTGGGGACAATGTGCACTGTaGTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTCT +
Preference number: 1 (lower is better)
Translates to: PPVTENSGVWGQCAL*SFILPSKQARSFCS
Trigger: AGAGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAATTTTCAGTCACTGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
3UTR TCA 90 bp TCAAAGTCATTCAGACAGAACAGCCTAAACAACAGCACAGAGGCCTaGAAGCACTGCATATTTGAGCATCTGCTACCAGTGCTGGATAGC +
Preference number: 1 (lower is better)
Translates to: SKSFRQNSLNNSTEA*KHCIFEHLLPVLDS
Trigger: GCTATCCAGCACTGGTAGCAGATGCTCAAATATGCAGTGCTTTCAGGCCTCTGTGCTGTTGTTTAGGCTGTTCTGTCTGAATGACTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
3UTR TCA 90 bp AGGAGCTGTAGACTCCAGCTCTGCTACCATTATAATCTGTGTGGATaGCTCACTGTTCACCTTACTAAGAAGACAGAAGCCAAAGCCAGC +
Preference number: 1 (lower is better)
Translates to: RSCRLQLCYHYNLCG*LTVHLTKKTEAKAS
Trigger: GCTGGCTTTGGCTTCTGTCTTCTTAGTAAGGTGAACAGTGAGTCATCCACACAGATTATAATGGTAGCAGAGCTGGAGTCTACAGCTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
3UTR GCA 90 bp CTGTTCACCTTACTAAGAAGACAGAAGCCAAAGCCAGCTGACCTGTaGCTCAACTCTCCTCCCTCCACCTTAACTCATTTGTACAAACAT +
Preference number: 1 (lower is better)
Translates to: LFTLLRRQKPKPADL*LNSPPSTLTHLYKH
Trigger: ATGTTTGTACAAATGAGTTAAGGTGGAGGGAGGAGAGTTGAGGCACAGGTCAGCTGGCTTTGGCTTCTGTCTTCTTAGTAAGGTGAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
3UTR GCA 90 bp GTAGAACAAGATGCTCTTTGTATATACTCCAGTTTCCTGCTTCTCTaGCTTGTTCTTCTATGTGGGGATCTTCCACTTAAGCTCTACCCC +
Preference number: 1 (lower is better)
Translates to: VEQDALCIYSSFLLL*LVLLCGDLPLKLYP
Trigger: GGGGTAGAGCTTAAGTGGAAGATCCCCACATAGAAGAACAAGGCAGAGAAGCAGGAAACTGGAGTATATACAAAGAGCATCTTGTTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
3UTR CCA 90 bp CTGGACTTTTCTTCTGTTCCTCCAGTGACTGAAAATTCAGGTGTGTaGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAG +
Preference number: 1 (lower is better)
Translates to: LDFSSVPPVTENSGV*GQCALCSFILPSKQ
Trigger: CTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAATTTTCAGTCACTGGAGGAACAGAAGAAAAGTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
3UTR GCA 90 bp ATCCTCTCCCTCATGAACCTAATGCTCCAGCTAAGTAGAACAAGATaGTCTTTGTATATACTCCAGTTTCCTGCTTCTCTGCCTTGTTCT +
Preference number: 1 (lower is better)
Translates to: ILSLMNLMLQLSRTR*SLYILQFPASLPCS
Trigger: AGAACAAGGCAGAGAAGCAGGAAACTGGAGTATATACAAAGAGCATCTTGTTCTACTTAGCTGGAGCATTAGGTTCATGAGGGAGAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
3UTR TCA 90 bp AAAAATGACCTCTGTAGGTTAACTGCATTTGGAATGACAGGGCCATaGAGGAATTCTAAATTCCCAGTAGAAAGCCATGGCTATGAACTT +
Preference number: 1 (lower is better)
Translates to: KNDLCRLTAFGMTGP*RNSKFPVESHGYEL
Trigger: AAGTTCATAGCCATGGCTTTCTACTGGGAATTTAGAATTCCTTCATGGCCCTGTCATTCCAAATGCAGTTAACCTACAGAGGTCATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575112.5
3UTR-3UTR TCA 90 bp CCTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGGCCTACCAATCCTCTTGCCGTaGTCCCATGCTGCCTCTTCC +
Preference number: 2 (lower is better)
Translates to: PAMLLPCFLPQKWCQHGLPILLP*SHAASS
Trigger: GGAAGAGGCAGCATGGGATCACGGCAAGAGGATTGG...TAGGCCATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
3UTR-3UTR TCA 90 bp CACTCAAGGGGACTTTCATACTCAAGGAGCTGTAGACTCCAGCTCTGCTACCATCCTTCCACCAAGGCCTaGGCCTGGAGCAGGAAACAG +
Preference number: 2 (lower is better)
Translates to: HSRGLSYSRSCRLQLCYHPSTKA*AWSRKQ
Trigger: CTGTTTCCTGCTCCAGGCTCAGGCCTTGGTGGAAGG...ATGGTAGCAGAGCTGGAGTCTACAGCTCCTTGAGTATGAAAGTCCCCTTGAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
3UTR-3UTR GCA 90 bp ACTGATCAAAGAAGAGCAGGTGTGGAGCCAGGCGTCCTAACTCCCAGACCAATCCTTGCCGTGATCCCATaGTGCCTCTTCCCTTCTTTC +
Preference number: 2 (lower is better)
Translates to: TDQRRAGVEPGVLTPRPILAVIP*CLFPSF
Trigger: GAAAGAAGGGAAGAGGCAGCATGGGATCACGGCAAG...GATTGGTCTGGGAGTTAGGACGCCTGGCTCCACACCTGCTCTTCTTTGATCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
3UTR-3UTR GCA 90 bp ACCAACCACAGGTCCCTCTTACCACAGAGTGGGTCCCAGGAGACGCTTACCAGAGGACAATGTGCACTGTaGTCATTTATACTACCCTCT +
Preference number: 2 (lower is better)
Translates to: TNHRSLLPQSGSQETLTRGQCAL*SFILPS
Trigger: AGAGGGTAGTATAAATGAGCACAGTGCACATTGTCC...TCTGGTAAGCGTCTCCTGGGACCCACTCTGTGGTAAGAGGGACCTGTGGTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574003.1
ENST00000575112.5
3UTR-3UTR CCA 90 bp GCTGCCCTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGTCCCTTCTTTCTGACTaGCCTTTGAGTCTAAATGAC +
Preference number: 2 (lower is better)
Translates to: AALLCFCPVSFRKSGASMSLLSD*PLSLND
Trigger: GTCATTTAGACTCAAAGGCCAGTCAGAAAGAAGGGA...CATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAGGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
3UTR-3UTR CCA 90 bp TCCAAGCTGGCTCTAGAGGATCACAGCCCAAGTATCACAGGCCAGACAGCTCATGAAAATTCAGGTGTGTaGGGACAATGTGCACTGTGC +
Preference number: 2 (lower is better)
Translates to: SKLALEDHSPSITGQTAHENSGV*GQCALC
Trigger: GCACAGTGCACATTGTCCCCACACACCTGAATTTTC...ATGAGCTGTCTGGCCTGTGATACTTGGGCTGTGATCCTCTAGAGCCAGCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
3UTR-3UTR CCA 90 bp CAGAGTGGGTCCCAGGAGACGCTTACCAGACAGCTCATGAGAAGACTGGACTTTAAGAATGAGATGGGATaGACAGGCCACACTGACACA +
Preference number: 2 (lower is better)
Translates to: QSGSQETLTRQLMRRLDFKNEMG*TGHTDT
Trigger: TGTGTCAGTGTGGCCTGTCCATCCCATCTCATTCTT...AAAGTCCAGTCTTCTCATGAGCTGTCTGGTAAGCGTCTCCTGGGACCCACTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
3UTR-3UTR TCA 90 bp CCTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGGCCTACAAAACCACTACTACTaGTCAAAGAAGAGCAGGTGT +
Preference number: 2 (lower is better)
Translates to: PAMLLPCFLPQKWCQHGLQNHYY*SKKSRC
Trigger: ACACCTGCTCTTCTTTGATCAGTAGTAGTGGTTTTG...TAGGCCATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
3UTR-3UTR TCA 90 bp GCTGCCCTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGTATGAAATGACCAGCTaGATCCAAAACCACTACTAC +
Preference number: 2 (lower is better)
Translates to: AALLCFCPVSFRKSGASMYEMTS*IQNHYY
Trigger: GTAGTAGTGGTTTTGGATTCAGCTGGTCATTTCATA...CATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAGGGCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
3UTR-3UTR GCA 90 bp TGGGTCCCAGGAGACGCTTACCAGACAGCTCATGAGAAGACTGGACTTTTCTTCCAGGCACGAAGCTTCTaGTCTGTCAACTCAGAAGAA +
Preference number: 2 (lower is better)
Translates to: WVPGDAYQTAHEKTGLFFQARSF*SVNSEE
Trigger: TTCTTCTGAGTTGACAGAGCAGAAGCTTCGTGCCTG...GAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGTAAGCGTCTCCTGGGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
3UTR-3UTR CCA 90 bp CCTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGGCCTATCCCTTCTTTCTGACTaGCCTTTGAGTCTAAATGAC +
Preference number: 2 (lower is better)
Translates to: PAMLLPCFLPQKWCQHGLSLLSD*PLSLND
Trigger: GTCATTTAGACTCAAAGGCCAGTCAGAAAGAAGGGA...TAGGCCATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
3UTR-3UTR TCA 90 bp GTGGGAATAAAACCAACCACAGGTCCCTCTTACCACAGAGTGGGTCCCAGGAGATTACCAGACAGCTCATaGGAAGACTGGACTTTTCTT +
Preference number: 2 (lower is better)
Translates to: VGIKPTTGPSYHRVGPRRLPDSS*EDWTFL
Trigger: AAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGTAA...TCTCCTGGGACCCACTCTGTGGTAAGAGGGACCTGTGGTTGGTTTTATTCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574003.1
ENST00000575112.5
3UTR-3UTR TCA 90 bp CAAGTATCACAGGCCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTCCTCCCCATAGAATGATGTaGGTCCAAGCTGGCTCTAGA +
Preference number: 2 (lower is better)
Translates to: QVSQARQLMRRLDFSSVPPHRMM*VQAGSR
Trigger: TCTAGAGCCAGCTTGGACTCACATCATTCTATGGGG...AGGAACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGCCTGTGATACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
3UTR-3UTR TCA 90 bp CACTCAAGGGGACTTTCATACTCAAGGAGCTGTAGACTCCAGCTCTGCTACCATCTTCTGTTCCTCCAGTaGCTGAAAATTCAGGTGTGT +
Preference number: 2 (lower is better)
Translates to: HSRGLSYSRSCRLQLCYHLLFLQ*LKIQVC
Trigger: ACACACCTGAATTTTCAGTCACTGGAGGAACAGAAG...ATGGTAGCAGAGCTGGAGTCTACAGCTCCTTGAGTATGAAAGTCCCCTTGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575112.5
3UTR-3UTR TCA 90 bp GCCTGTTTATTCTGTTCTCTTATTACCAACCCAAGGCTTGAGCTCTGTGAGAGATGTTCCTCCAGTGACTaGAAATTCAGGTGTGTGGGG +
Preference number: 2 (lower is better)
Translates to: ACLFCSLITNPRLELCERCSSSD*KFRCVG
Trigger: CCCCACACACCTGAATTTTCAGTCACTGGAGGAACA...TCTCTCACAGAGCTCAAGCCTTGGGTTGGTAATAAGAGAACAGAATAAACAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
3UTR-3UTR GCA 90 bp CCAGGAGACGCTTACCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTCCGGACAATGTGCACTGTaGTCATTTATACTACCCTCT +
Preference number: 2 (lower is better)
Translates to: PGDAYQTAHEKTGLFFCSGQCAL*SFILPS
Trigger: AGAGGGTAGTATAAATGAGCACAGTGCACATTGTCC...GGAACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGTAAGCGTCTCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574003.1
ENST00000575112.5
3UTR-3UTR TCA 90 bp GAAAATTCAGGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTTTCAACCCCATAGAATaGTGTGAGTCCAAGCTGGCT +
Preference number: 2 (lower is better)
Translates to: ENSGVWGQCALCSFILPSFNPIE*CESKLA
Trigger: AGCCAGCTTGGACTCACATCATTCTATGGGGTTGAA...AGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
3UTR-3UTR CCA 90 bp GAAAATTCAGGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTGAAAATTCAGGTGTGTaGGGACAATGTGCACTGTGC +
Preference number: 2 (lower is better)
Translates to: ENSGVWGQCALCSFILPSENSGV*GQCALC
Trigger: GCACAGTGCACATTGTCCCCACACACCTGAATTTTC...AGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
3UTR-3UTR CCA 90 bp GCCTGTTTATTCTGTTCTCTTATTACCAACCCAAGGCTTGAGCTCTGTGAGAGAAAGGCTCCCCCTGCCTaGGATCTAAAAGCAATAATA +
Preference number: 2 (lower is better)
Translates to: ACLFCSLITNPRLELCERKAPPA*DLKAII
Trigger: TATTATTGCTTTTAGATCCCAGGCAGGGGGAGCCTT...TCTCTCACAGAGCTCAAGCCTTGGGTTGGTAATAAGAGAACAGAATAAACAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575112.5
3UTR-3UTR TCA 90 bp ATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTGACTGAAAATTCAGGTGTGCTTCTGTTCCTCCAGTaGCTGAAAATTCAGGTGTGT +
Preference number: 2 (lower is better)
Translates to: MRRLDFSSVPPVTENSGVLLFLQ*LKIQVC
Trigger: ACACACCTGAATTTTCAGTCACTGGAGGAACAGAAG...CACACCTGAATTTTCAGTCACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
3UTR-3UTR TCA 90 bp TACCTGTTTATAGGTCATTATTTCTATCAAGGTGGGAATAAAACCAACCACAGGTGTTCCTCCAGTGACTaGAAATTCAGGTGTGTGGGG +
Preference number: 2 (lower is better)
Translates to: YLFIGHYFYQGGNKTNHRCSSSD*KFRCVG
Trigger: CCCCACACACCTGAATTTTCAGTCACTGGAGGAACA...CCTGTGGTTGGTTTTATTCCCACCTTGATAGAAATAATGACCTATAAACAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574003.1
ENST00000575112.5
3UTR-3UTR GCA 90 bp ATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTGACTGAAAATTCAGGTGTGGGACAATGTGCACTGTaGTCATTTATACTACCCTCT +
Preference number: 2 (lower is better)
Translates to: MRRLDFSSVPPVTENSGVGQCAL*SFILPS
Trigger: AGAGGGTAGTATAAATGAGCACAGTGCACATTGTCC...CACACCTGAATTTTCAGTCACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
3UTR CAA 90 bp AGGGTACTGCCTGTTTATTCTGTTCTCTTATTACCAACCCAAGGCTaGAGCTCTGTGAGAGATGTGTATTTCTCAATGTTAATGAGTCCT +
Preference number: 2 (lower is better)
Translates to: RVLPVYSVLLLPTQG*SSVRDVYFSMLMSP
Trigger: AGGACTCATTAACATTGAGAAATACACATCTCTCACAGAGCTCAAGCCTTGGGTTGGTAATAAGAGAACAGAATAAACAGGCAGTACCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
3UTR GCA 72 bp CCCAGAGCCGGCACTGTCAACTATGATCTCCAAGACTaGTGCACAGCACTCACCTTCCAAACCTCACCTCCT +
Preference number: 3 (lower is better)
Translates to: PRAGTVNYDLQD*CTALTFQTSPP
Trigger: AGGAGGTGAGGTTTGGAAGGTGAGTGCTGTGCAGCAGTCTTGGAGATCATAGTTGACAGTGCCGGCTCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
3UTR TCA 72 bp ACAACACTGTTACAGGTGACATGGCATGAGGTACGGTaGAAGCCCAAGGAGAGACTGGCCAGTTCCCCTCTG +
Preference number: 3 (lower is better)
Translates to: TTLLQVTWHEVR*KPKERLASSPL
Trigger: CAGAGGGGAACTGGCCAGTCTCTCCTTGGGCTTTCACCGTACCTCATGCCATGTCACCTGTAACAGTGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
3UTR GCA 72 bp GCACAGAGGCCTGAAAGCACTGCATATTTGAGCATCTaGTACCAGTGCTGGATAGCTGGAACAGAAGGGAAC +
Preference number: 3 (lower is better)
Translates to: AQRPESTAYLSI*YQCWIAGTEGN
Trigger: GTTCCCTTCTGTTCCAGCTATCCAGCACTGGTAGCAGATGCTCAAATATGCAGTGCTTTCAGGCCTCTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
3UTR CCA 72 bp CCTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTaGTGCCAGCATGGCCTATCTGGGTCTTATGACTAT +
Preference number: 3 (lower is better)
Translates to: PAMLLPCFLPQK*CQHGLSGSYDY
Trigger: ATAGTCATAAGACCCAGATAGGCCATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
3UTR TCA 72 bp GAGGGAATGAGTTGTCTTCAACCCCATAGAATGATGTaGGTCCAAGCTGGCTCTAGAGGATCACAGCCCAAG +
Preference number: 3 (lower is better)
Translates to: EGMSCLQPHRMM*VQAGSRGSQPK
Trigger: CTTGGGCTGTGATCCTCTAGAGCCAGCTTGGACTCACATCATTCTATGGGGTTGAAGACAACTCATTCCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000536255.6
ENST00000539417.6
ENST00000571558.5
ENST00000573577.5
ENST00000575599.5
3UTR GCA 72 bp GCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTaGCAGCATGGCCTATCTGGGTCTTATGACTATGAA +
Preference number: 3 (lower is better)
Translates to: AMLLPCFLPQKW*QHGLSGSYDYE
Trigger: TTCATAGTCATAAGACCCAGATAGGCCATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
3UTR GCA 72 bp CTCACCAGATCTCCATGTCTGTCCAGATCGATTCCATaGTTCAAGGCCAAGTTAAATGCCTCCTCCAGGAAG +
Preference number: 3 (lower is better)
Translates to: LTRSPCLSRSIP*FKAKLNASSRK
Trigger: CTTCCTGGAGGAGGCATTTAACTTGGCCTTGAAGCATGGAATCGATCTGGACAGACATGGAGATCTGGTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
3UTR GCA 72 bp GTCCAGATCGATTCCATGCTTCAAGGCCAAGTTAAATaGCTCCTCCAGGAAGGTGTCACCATAAAGGAGATC +
Preference number: 3 (lower is better)
Translates to: VQIDSMLQGQVK*LLQEGVTIKEI
Trigger: GATCTCCTTTATGGTGACACCTTCCTGGAGGAGGCATTTAACTTGGCCTTGAAGCATGGAATCGATCTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
3UTR-3UTR CAA 90 bp ACTGATCAAAGAAGAGCAGGTGTGGAGCCAGGCGTCCTAACTCCCAGACCAATCCTTTCTGACTGGCCTTaGAGTCTAAATGACTTGTTA +
Preference number: 3 (lower is better)
Translates to: TDQRRAGVEPGVLTPRPILSDWP*SLNDLL
Trigger: TAACAAGTCATTTAGACTCAAAGGCCAGTCAGAAAG...GATTGGTCTGGGAGTTAGGACGCCTGGCTCCACACCTGCTCTTCTTTGATCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
3UTR TCA 72 bp TTCAGACAGAACAGCCTAAACAACAGCACAGAGGCCTaGAAGCACTGCATATTTGAGCATCTGCTACCAGTG +
Preference number: 3 (lower is better)
Translates to: FRQNSLNNSTEA*KHCIFEHLLPV
Trigger: CACTGGTAGCAGATGCTCAAATATGCAGTGCTTTCAGGCCTCTGTGCTGTTGTTTAGGCTGTTCTGTCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
3UTR GCA 72 bp TCCCATAAGCCCTCCTTGTACAGCTCTCCAGGGTACTaGCTGTTTATTCTGTTCTCTTATTACCAACCCAAG +
Preference number: 3 (lower is better)
Translates to: SHKPSLYSSPGY*LFILFSYYQPK
Trigger: CTTGGGTTGGTAATAAGAGAACAGAATAAACAGGCAGTACCCTGGAGAGCTGTACAAGGAGGGCTTATGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
3UTR GCA 72 bp CCTGAAAGCACTGCATATTTGAGCATCTGCTACCAGTaGTGGATAGCTGGAACAGAAGGGAACATATGCTTG +
Preference number: 3 (lower is better)
Translates to: PESTAYLSICYQ*WIAGTEGNICL
Trigger: CAAGCATATGTTCCCTTCTGTTCCAGCTATCCAGCACTGGTAGCAGATGCTCAAATATGCAGTGCTTTCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
3UTR CCA 72 bp TGCATATTTGAGCATCTGCTACCAGTGCTGGATAGCTaGAACAGAAGGGAACATATGCTTGTAGTCAACAGG +
Preference number: 3 (lower is better)
Translates to: CIFEHLLPVLDS*NRREHMLVVNR
Trigger: CCTGTTGACTACAAGCATATGTTCCCTTCTGTTCCAGCTATCCAGCACTGGTAGCAGATGCTCAAATATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
3UTR TCA 72 bp GCCAGCATGGCCTATCTGGGTCTTATGACTATGAAATaGCCAGCTGAATCCAAAACCACTACTACTGATCAA +
Preference number: 3 (lower is better)
Translates to: ASMAYLGLMTMK*PAESKTTTTDQ
Trigger: TTGATCAGTAGTAGTGGTTTTGGATTCAGCTGGTCATTTCATAGTCATAAGACCCAGATAGGCCATGCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
3UTR TCA 72 bp CTCTGTAGGTTAACTGCATTTGGAATGACAGGGCCATaGAGGAATTCTAAATTCCCAGTAGAAAGCCATGGC +
Preference number: 3 (lower is better)
Translates to: LCRLTAFGMTGP*RNSKFPVESHG
Trigger: GCCATGGCTTTCTACTGGGAATTTAGAATTCCTTCATGGCCCTGTCATTCCAAATGCAGTTAACCTACAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
3UTR TCA 72 bp AGACTCCAGCTCTGCTACCATTATAATCTGTGTGGATaGCTCACTGTTCACCTTACTAAGAAGACAGAAGCC +
Preference number: 3 (lower is better)
Translates to: RLQLCYHYNLCG*LTVHLTKKTEA
Trigger: GGCTTCTGTCTTCTTAGTAAGGTGAACAGTGAGTCATCCACACAGATTATAATGGTAGCAGAGCTGGAGTCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
3UTR GCA 72 bp CTCATGAACCTAATGCTCCAGCTAAGTAGAACAAGATaGTCTTTGTATATACTCCAGTTTCCTGCTTCTCTG +
Preference number: 3 (lower is better)
Translates to: LMNLMLQLSRTR*SLYILQFPASL
Trigger: CAGAGAAGCAGGAAACTGGAGTATATACAAAGAGCATCTTGTTCTACTTAGCTGGAGCATTAGGTTCATGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR CCA 90 bp CACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACACTGGACGGCCGCGGATTaGCTGTGCTCAGCGGCGGGC +
Preference number: 4 (lower is better)
Translates to: HSPSITGMRWDGQATLTHWTAAD*LCSAAG
Trigger: GCCCGCCGCTGAGCACAGCCAATCCGCGGCCGTCCA...GTGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR CCA 90 bp CACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACACGACGCCCCTGCTTGGTaGGCTGGCCTCGCCTTCGCC +
Preference number: 4 (lower is better)
Translates to: HSPSITGMRWDGQATLTHDAPAW*AGLAFA
Trigger: GGCGAAGGCGAGGCCAGCCCACCAAGCAGGGGCGTC...GTGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR CCA 90 bp TCCAAGCTGGCTCTAGAGGATCACAGCCCAAGTATCACAGGCCAGACAGCTCATTGGACGGCCGCGGATTaGCTGTGCTCAGCGGCGGGC +
Preference number: 4 (lower is better)
Translates to: SKLALEDHSPSITGQTAHWTAAD*LCSAAG
Trigger: GCCCGCCGCTGAGCACAGCCAATCCGCGGCCGTCCA...ATGAGCTGTCTGGCCTGTGATACTTGGGCTGTGATCCTCTAGAGCCAGCTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CCA 90 bp TCCAAGCTGGCTCTAGAGGATCACAGCCCAAGTATCACAGGCCAGACAGCTCATGACGCCCCTGCTTGGTaGGCTGGCCTCGCCTTCGCC +
Preference number: 4 (lower is better)
Translates to: SKLALEDHSPSITGQTAHDAPAW*AGLAFA
Trigger: GGCGAAGGCGAGGCCAGCCCACCAAGCAGGGGCGTC...ATGAGCTGTCTGGCCTGTGATACTTGGGCTGTGATCCTCTAGAGCCAGCTTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CCA 90 bp CACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACACGGTGACGCCCCTGCTTaGTGGGCTGGCCTCGCCTTC +
Preference number: 4 (lower is better)
Translates to: HSPSITGMRWDGQATLTHGDAPA*WAGLAF
Trigger: GAAGGCGAGGCCAGCCCACCAAGCAGGGGCGTCACC...GTGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR TCA 90 bp CACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACACTGCTCAGCGGCGGGCTaGGCAACTGGAGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: HSPSITGMRWDGQATLTHCSAAG*ATGVRG
Trigger: TCCCCTCACTCCAGTTGCTCAGCCCGCCGCTGAGCA...GTGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR CCA 90 bp TGTCAACTCAGAAGAATGAGATGGGATGGACAGGCCACACTGACACACCACCACTGGACGGCCGCGGATTaGCTGTGCTCAGCGGCGGGC +
Preference number: 4 (lower is better)
Translates to: CQLRRMRWDGQATLTHHHWTAAD*LCSAAG
Trigger: GCCCGCCGCTGAGCACAGCCAATCCGCGGCCGTCCA...GTGGTGGTGTGTCAGTGTGGCCTGTCCATCCCATCTCATTCTTCTGAGTTGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571558.5
CDS-3UTR CCA 90 bp CCAACCACAGGTCCCTCTTACCACAGAGTGGGTCCCAGGAGACGCTTACCAGACAGCCCAAGGAGAGACTaGCCAGTTCCCCTCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PTTGPSYHRVGPRRRLPDSPRRD*PVPLCQ
Trigger: CTGGCAGAGGGGAACTGGCCAGTCTCTCCTTGGGCT...GTCTGGTAAGCGTCTCCTGGGACCCACTCTGTGGTAAGAGGGACCTGTGGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR TCA 90 bp CACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACACTTGGCTTTCCCTTGGTaGCGCCCCTGCTTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: HSPSITGMRWDGQATLTHLAFPW*RPCLVG
Trigger: GCCCACCAAGCAGGGGCGTCACCAAGGGAAAGCCAA...GTGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR CCA 90 bp CACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACACGGCGGGCTGAGCAACTaGAGTGAGGGGAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: HSPSITGMRWDGQATLTHGGLSN*SEGSSW
Trigger: CCAACTGCTCCCCTCACTCCAGTTGCTCAGCCCGCC...GTGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR CCA 90 bp CACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACACGGCCGAAACAGTGAGTaGACGGCCGCGGATTGGCTG +
Preference number: 4 (lower is better)
Translates to: HSPSITGMRWDGQATLTHGRNSE*TAADWL
Trigger: CAGCCAATCCGCGGCCGTCCACTCACTGTTTCGGCC...GTGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR CCA 90 bp TCTGCTCTGTCAACTCAGAAGAATGAGATGGGATGGACAGGCCACACTGACACAGACGCCCCTGCTTGGTaGGCTGGCCTCGCCTTCGCC +
Preference number: 4 (lower is better)
Translates to: SALSTQKNEMGWTGHTDTDAPAW*AGLAFA
Trigger: GGCGAAGGCGAGGCCAGCCCACCAAGCAGGGGCGTC...TGTGTCAGTGTGGCCTGTCCATCCCATCTCATTCTTCTGAGTTGACAGAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571558.5
CDS-3UTR CCA 90 bp TGTCAACTCAGAAGAATGAGATGGGATGGACAGGCCACACTGACACACCACCACGGTGACGCCCCTGCTTaGTGGGCTGGCCTCGCCTTC +
Preference number: 4 (lower is better)
Translates to: CQLRRMRWDGQATLTHHHGDAPA*WAGLAF
Trigger: GAAGGCGAGGCCAGCCCACCAAGCAGGGGCGTCACC...GTGGTGGTGTGTCAGTGTGGCCTGTCCATCCCATCTCATTCTTCTGAGTTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571558.5
CDS-3UTR TCA 90 bp CACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACACGCTGAGCAACTGGAGTaGGGGGAGCAGTTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: HSPSITGMRWDGQATLTHAEQLE*GEQLGQ
Trigger: TTGGCCCAACTGCTCCCCTCACTCCAGTTGCTCAGC...GTGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR TCA 90 bp CACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACACGGGCCGTCTGCTCGGTaGTTGGCCGAAACAGTGAGT +
Preference number: 4 (lower is better)
Translates to: HSPSITGMRWDGQATLTHGPSAR*LAETVS
Trigger: ACTCACTGTTTCGGCCAATCACCGAGCAGACGGCCC...GTGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR GCA 90 bp CACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACACGGCATCCAAGCGAAATaGGTGAGGCCAGCCCGACCT +
Preference number: 4 (lower is better)
Translates to: HSPSITGMRWDGQATLTHGIQAK*VRPARP
Trigger: AGGTCGGGCTGGCCTCACGCATTTCGCTTGGATGCC...GTGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR GCA 90 bp CACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACACAATTCCCTGGCCCACTaGTTCCAGCCTGGCGGTACC +
Preference number: 4 (lower is better)
Translates to: HSPSITGMRWDGQATLTHNSLAH*FQPGGT
Trigger: GGTACCGCCAGGCTGGAAGCAGTGGGCCAGGGAATT...GTGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR CCA 90 bp TCACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACAACAAGACCCGTTCCCTaGAGGCGCGCACAGACCCCT +
Preference number: 4 (lower is better)
Translates to: SQPKYHRHEMGWTGHTDTTRPVP*RRAQTP
Trigger: AGGGGTCTGTGCGCGCCTCCAGGGAACGGGTCTTGT...TGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR CCA 90 bp GCTGCCCTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGCCACTGCTTCCAGCCTaGCGGTACCTGTTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: AALLCFCPVSFRKSGASMPLLPA*RYLFRS
Trigger: GCTCCTAAACAGGTACCGCCAGGCTGGAAGCAGTGG...CATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAGGGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS-3UTR CCA 90 bp TCCAAGCTGGCTCTAGAGGATCACAGCCCAAGTATCACAGGCCAGACAGCTCATGGCGGGCTGAGCAACTaGAGTGAGGGGAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: SKLALEDHSPSITGQTAHGGLSN*SEGSSW
Trigger: CCAACTGCTCCCCTCACTCCAGTTGCTCAGCCCGCC...ATGAGCTGTCTGGCCTGTGATACTTGGGCTGTGATCCTCTAGAGCCAGCTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CCA 90 bp GCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTCTGTCTGGACGGCCGCGGATTaGCTGTGCTCAGCGGCGGGC +
Preference number: 4 (lower is better)
Translates to: ALCSFILPSKQARSFCSVWTAAD*LCSAAG
Trigger: GCCCGCCGCTGAGCACAGCCAATCCGCGGCCGTCCA...GACAGAGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp TCACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACAGATTGGCCGAAACAGTaGGTGGACGGCCGCGGATTG +
Preference number: 4 (lower is better)
Translates to: SQPKYHRHEMGWTGHTDTDWPKQ*VDGRGL
Trigger: CAATCCGCGGCCGTCCACTCACTGTTTCGGCCAATC...TGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR TCA 90 bp CACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACACGCACCACCATTATGTTaGCTTCTCGTCCCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: HSPSITGMRWDGQATLTHAPPLC*LLVPPP
Trigger: AGGGGGCGGGACGAGAAGTCAACATAATGGTGGTGC...GTGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR TCA 90 bp GTGGGAATAAAACCAACCACAGGTCCCTCTTACCACAGAGTGGGTCCCAGGAGAGCAACCTCTGCCTCCTaGGCTCAAGCCATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: VGIKPTTGPSYHRVGPRRATSAS*AQAILP
Trigger: TGGGAGGATGGCTTGAGCTCAGGAGGCAGAGGTTGC...TCTCCTGGGACCCACTCTGTGGTAAGAGGGACCTGTGGTTGGTTTTATTCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR GCA 90 bp ACTGATCAAAGAAGAGCAGGTGTGGAGCCAGGCGTCCTAACTCCCAGACCAATCAATTCCCTGGCCCACTaGTTCCAGCCTGGCGGTACC +
Preference number: 4 (lower is better)
Translates to: TDQRRAGVEPGVLTPRPINSLAH*FQPGGT
Trigger: GGTACCGCCAGGCTGGAAGCAGTGGGCCAGGGAATT...GATTGGTCTGGGAGTTAGGACGCCTGGCTCCACACCTGCTCTTCTTTGATCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS-3UTR GCA 90 bp ACAGAGTGGGTCCCAGGAGACGCTTACCAGACAGCTCATGAGAAGACTGGACTTAATTCCCTGGCCCACTaGTTCCAGCCTGGCGGTACC +
Preference number: 4 (lower is better)
Translates to: TEWVPGDAYQTAHEKTGLNSLAH*FQPGGT
Trigger: GGTACCGCCAGGCTGGAAGCAGTGGGCCAGGGAATT...AAGTCCAGTCTTCTCATGAGCTGTCTGGTAAGCGTCTCCTGGGACCCACTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574003.1
ENST00000575112.5
CDS-3UTR GCA 90 bp TCACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACAAGCTTCCGGGCCGTCTaGTCGGTGATTGGCCGAAAC +
Preference number: 4 (lower is better)
Translates to: SQPKYHRHEMGWTGHTDTSFRAV*SVIGRN
Trigger: GTTTCGGCCAATCACCGAGCAGACGGCCCGGAAGCT...TGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR GCA 90 bp GCTGCCCTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGCCAGACCAATCCTCTTaGCGTGATCCCATGCTGCCT +
Preference number: 4 (lower is better)
Translates to: AALLCFCPVSFRKSGASMPDQSS*RDPMLP
Trigger: AGGCAGCATGGGATCACGGCAAGAGGATTGGTCTGG...CATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAGGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS-3UTR CCA 90 bp CACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACACGGTGCAGACCGCGAATaGATCGCAGCGTATTCTGGG +
Preference number: 4 (lower is better)
Translates to: HSPSITGMRWDGQATLTHGADRE*IAAYSG
Trigger: CCCAGAATACGCTGCGATCCATTCGCGGTCTGCACC...GTGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR CCA 90 bp CACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACACCCACTGCTTCCAGCCTaGCGGTACCTGTTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: HSPSITGMRWDGQATLTHPLLPA*RYLFRS
Trigger: GCTCCTAAACAGGTACCGCCAGGCTGGAAGCAGTGG...GTGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR CCA 90 bp CAAGTATCACAGGCCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTCCTGACGCCCCTGCTTGGTaGGCTGGCCTCGCCTTCGCC +
Preference number: 4 (lower is better)
Translates to: QVSQARQLMRRLDFSSVPDAPAW*AGLAFA
Trigger: GGCGAAGGCGAGGCCAGCCCACCAAGCAGGGGCGTC...AGGAACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGCCTGTGATACTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp ACTGATCAAAGAAGAGCAGGTGTGGAGCCAGGCGTCCTAACTCCCAGACCAATCATGGACAGGCCACACTaGCACACCACCACACCGCTT +
Preference number: 4 (lower is better)
Translates to: TDQRRAGVEPGVLTPRPIMDRPH*HTTTPL
Trigger: AAGCGGTGTGGTGGTGTGTCAGTGTGGCCTGTCCAT...GATTGGTCTGGGAGTTAGGACGCCTGGCTCCACACCTGCTCTTCTTTGATCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS-3UTR TCA 90 bp TCACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACAATGGACAGGCCACACTaGCACACCACCACACCGCTT +
Preference number: 4 (lower is better)
Translates to: SQPKYHRHEMGWTGHTDTMDRPH*HTTTPL
Trigger: AAGCGGTGTGGTGGTGTGTCAGTGTGGCCTGTCCAT...TGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR TCA 90 bp GTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGATGCTCAGCGGCGGGCTaGGCAACTGGAGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: VWGQCALCSFILPSKQARCSAAG*ATGVRG
Trigger: TCCCCTCACTCCAGTTGCTCAGCCCGCCGCTGAGCA...TCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp CCTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGGCCTAGCACTGACGGTTAGGTaGGTGGATAACTGGGGTCCA +
Preference number: 4 (lower is better)
Translates to: PAMLLPCFLPQKWCQHGLALTVR*VDNWGP
Trigger: TGGACCCCAGTTATCCACTCACCTAACCGTCAGTGC...TAGGCCATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR GCA 90 bp TCACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACAGGTGTACTTTCCGGGTaGAGACCGCGAATGGATCGC +
Preference number: 4 (lower is better)
Translates to: SQPKYHRHEMGWTGHTDTGVLSG*RPRMDR
Trigger: GCGATCCATTCGCGGTCTGCACCCGGAAAGTACACC...TGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR GCA 90 bp TGGGTCCCAGGAGACGCTTACCAGACAGCTCATGAGAAGACTGGACTTTTCTTCAATTCCCTGGCCCACTaGTTCCAGCCTGGCGGTACC +
Preference number: 4 (lower is better)
Translates to: WVPGDAYQTAHEKTGLFFNSLAH*FQPGGT
Trigger: GGTACCGCCAGGCTGGAAGCAGTGGGCCAGGGAATT...GAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGTAAGCGTCTCCTGGGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574003.1
ENST00000575112.5
CDS-3UTR GCA 90 bp GCTGCCCTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGCTTGCCGTGATCCCATaGTGCCTCTTCCCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: AALLCFCPVSFRKSGASMLAVIP*CLFPSF
Trigger: GAAAGAAGGGAAGAGGCAGCATGGGATCACGGCAAG...CATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAGGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS-3UTR GCA 90 bp CCTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGGCCTACTTCCGCAAAAGTGGTaGCAGCATGGCCTATCTGGG +
Preference number: 4 (lower is better)
Translates to: PAMLLPCFLPQKWCQHGLLPQKW*QHGLSG
Trigger: CCCAGATAGGCCATGCTGGCACCACTTTTGCGGAAG...TAGGCCATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS-3UTR GCA 90 bp GCTGCCCTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGGCCCTGCTATGCTTCTaGCCTGTTTCCTTCCGCAAA +
Preference number: 4 (lower is better)
Translates to: AALLCFCPVSFRKSGASMALLCF*PVSFRK
Trigger: TTTGCGGAAGGAAACAGGGCAGAAGCATAGCAGGGC...CATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAGGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS-3UTR GCA 90 bp ACAGAGTGGGTCCCAGGAGACGCTTACCAGACAGCTCATGAGAAGACTGGACTTAAGCCAGCTGACCTGTaGCTCAACTCTCCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: TEWVPGDAYQTAHEKTGLKPADL*LNSPPS
Trigger: GGAGGGAGGAGAGTTGAGGCACAGGTCAGCTGGCTT...AAGTCCAGTCTTCTCATGAGCTGTCTGGTAAGCGTCTCCTGGGACCCACTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR CCA 90 bp CACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACACGTTCTGAGAATTCCCTaGCCCACTGCTTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: HSPSITGMRWDGQATLTHVLRIP*PTASSL
Trigger: CAGGCTGGAAGCAGTGGGCCAGGGAATTCTCAGAAC...GTGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR CCA 90 bp GCTGCCCTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGTACAGGACAGATGAGTaGGTTTGCCTCCCACTCAGC +
Preference number: 4 (lower is better)
Translates to: AALLCFCPVSFRKSGASMYRTDE*VCLPLS
Trigger: GCTGAGTGGGAGGCAAACCCACTCATCTGTCCTGTA...CATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAGGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405578.8
CDS-3UTR CCA 90 bp TGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGGTGACGCCCCTGCTTaGTGGGCTGGCCTCGCCTTC +
Preference number: 4 (lower is better)
Translates to: CGDNVHCAHLYYPLNRHEGDAPA*WAGLAF
Trigger: GAAGGCGAGGCCAGCCCACCAAGCAGGGGCGTCACC...TTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CCA 90 bp CACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACACCTCGTCCCGCCCCCTTaGGCTTCAGAAATAATGGTG +
Preference number: 4 (lower is better)
Translates to: HSPSITGMRWDGQATLTHLVPPP*ASEIMV
Trigger: CACCATTATTTCTGAAGCCCAAGGGGGCGGGACGAG...GTGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR CCA 90 bp CCTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGGCCTACCTCTTACCACAGAGTaGGTCCCAGGAGACGCTTAC +
Preference number: 4 (lower is better)
Translates to: PAMLLPCFLPQKWCQHGLPLTTE*VPGDAY
Trigger: GTAAGCGTCTCCTGGGACCCACTCTGTGGTAAGAGG...TAGGCCATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS-3UTR CCA 90 bp GCTGCCCTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGACCCACTTGTGTTCCTaGCCCTCACACCTCAGTTGT +
Preference number: 4 (lower is better)
Translates to: AALLCFCPVSFRKSGASMTHLCS*PSHLSC
Trigger: ACAACTGAGGTGTGAGGGCCAGGAACACAAGTGGGT...CATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAGGGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR TCA 90 bp AACCAACCACAGGTCCCTCTTACCACAGAGTGGGTCCCAGGAGACGCTTACCAGTTGATCAGCTCCTGTTaGATTTCCTCCAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: NQPQVPLTTEWVPGDAYQLISSC*ISSSTA
Trigger: GGCTGTGCTGGAGGAAATTCAACAGGAGCTGATCAA...CTGGTAAGCGTCTCCTGGGACCCACTCTGTGGTAAGAGGGACCTGTGGTTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574003.1
ENST00000575112.5
CDS-3UTR TCA 90 bp ACCAACCACAGGTCCCTCTTACCACAGAGTGGGTCCCAGGAGACGCTTACCAGATGTTCCTCCAGTGACTaGAAATTCAGGTGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: TNHRSLLPQSGSQETLTRCSSSD*KFRCVG
Trigger: CCCCACACACCTGAATTTTCAGTCACTGGAGGAACA...TCTGGTAAGCGTCTCCTGGGACCCACTCTGTGGTAAGAGGGACCTGTGGTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574003.1
ENST00000575112.5
CDS-3UTR TCA 90 bp GCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTCTGTCTTGGCTTTCCCTTGGTaGCGCCCCTGCTTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: ALCSFILPSKQARSFCSVLAFPW*RPCLVG
Trigger: GCCCACCAAGCAGGGGCGTCACCAAGGGAAAGCCAA...GACAGAGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CCA 90 bp GCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTCTGTCACAAGACCCGTTCCCTaGAGGCGCGCACAGACCCCT +
Preference number: 4 (lower is better)
Translates to: ALCSFILPSKQARSFCSVTRPVP*RRAQTP
Trigger: AGGGGTCTGTGCGCGCCTCCAGGGAACGGGTCTTGT...GACAGAGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CCA 90 bp GCCCAAGTATCACAGGCCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTACAAGACCCGTTCCCTaGAGGCGCGCACAGACCCCT +
Preference number: 4 (lower is better)
Translates to: AQVSQARQLMRRLDFSSVTRPVP*RRAQTP
Trigger: AGGGGTCTGTGCGCGCCTCCAGGGAACGGGTCTTGT...AACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGCCTGTGATACTTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CCA 90 bp AGTGGGTCCCAGGAGACGCTTACCAGACAGCTCATGAGAAGACTGGACTTTTCTCCACTGCTTCCAGCCTaGCGGTACCTGTTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: SGSQETLTRQLMRRLDFSPLLPA*RYLFRS
Trigger: GCTCCTAAACAGGTACCGCCAGGCTGGAAGCAGTGG...AGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGTAAGCGTCTCCTGGGACCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574003.1
ENST00000575112.5
CDS-3UTR CCA 90 bp CTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGGCCTATGTTCTGAGAATTCCCTaGCCCACTGCTTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LLCFCPVSFRKSGASMAYVLRIP*PTASSL
Trigger: CAGGCTGGAAGCAGTGGGCCAGGGAATTCTCAGAAC...ATAGGCCATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS-3UTR CCA 90 bp TCCAAGCTGGCTCTAGAGGATCACAGCCCAAGTATCACAGGCCAGACAGCTCATGTTCTGAGAATTCCCTaGCCCACTGCTTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: SKLALEDHSPSITGQTAHVLRIP*PTASSL
Trigger: CAGGCTGGAAGCAGTGGGCCAGGGAATTCTCAGAAC...ATGAGCTGTCTGGCCTGTGATACTTGGGCTGTGATCCTCTAGAGCCAGCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CCA 90 bp GAGTGGGTCCCAGGAGACGCTTACCAGACAGCTCATGAGAAGACTGGACTTTTCGTTCTGAGAATTCCCTaGCCCACTGCTTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: EWVPGDAYQTAHEKTGLFVLRIP*PTASSL
Trigger: CAGGCTGGAAGCAGTGGGCCAGGGAATTCTCAGAAC...GAAAAGTCCAGTCTTCTCATGAGCTGTCTGGTAAGCGTCTCCTGGGACCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574003.1
ENST00000575112.5
CDS-3UTR CCA 90 bp GGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTGGCGGGCTGAGCAACTaGAGTGAGGGGAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: GDNVHCAHLYYPLNRHEAGGLSN*SEGSSW
Trigger: CCAACTGCTCCCCTCACTCCAGTTGCTCAGCCCGCC...AGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CCA 90 bp GTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGGCCGAAACAGTGAGTaGACGGCCGCGGATTGGCTG +
Preference number: 4 (lower is better)
Translates to: VCGDNVHCAHLYYPLNRHGRNSE*TAADWL
Trigger: CAGCCAATCCGCGGCCGTCCACTCACTGTTTCGGCC...GTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CCA 90 bp GGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCAGGCCGAAACAGTGAGTaGACGGCCGCGGATTGGCTG +
Preference number: 4 (lower is better)
Translates to: GVWGQCALCSFILPSKQAGRNSE*TAADWL
Trigger: CAGCCAATCCGCGGCCGTCCACTCACTGTTTCGGCC...TGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CCA 90 bp AATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTGGTGACGCCCCTGCTTaGTGGGCTGGCCTCGCCTTC +
Preference number: 4 (lower is better)
Translates to: NVHCAHLYYPLNRHEASAGDAPA*WAGLAF
Trigger: GAAGGCGAGGCCAGCCCACCAAGCAGGGGCGTCACC...AGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CCA 90 bp ACAGAGTGGGTCCCAGGAGACGCTTACCAGACAGCTCATGAGAAGACTGGACTTCCTCTTACCACAGAGTaGGTCCCAGGAGACGCTTAC +
Preference number: 4 (lower is better)
Translates to: TEWVPGDAYQTAHEKTGLPLTTE*VPGDAY
Trigger: GTAAGCGTCTCCTGGGACCCACTCTGTGGTAAGAGG...AAGTCCAGTCTTCTCATGAGCTGTCTGGTAAGCGTCTCCTGGGACCCACTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000574003.1
ENST00000575112.5
CDS-3UTR CCA 90 bp GCTGCCCTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGTTCCTTCCGCAAAAGTaGTGCCAGCATGGCCTATCT +
Preference number: 4 (lower is better)
Translates to: AALLCFCPVSFRKSGASMFLPQK*CQHGLS
Trigger: AGATAGGCCATGCTGGCACCACTTTTGCGGAAGGAA...CATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAGGGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
3UTR CAA 72 bp CCTTACCCACTTGTGTTCCTGGCCCTCACACCTCAGTaGTCACTCAGGTTAGCGAATAGCCCTTGGACCTCT +
Preference number: 4 (lower is better)
Translates to: PYPLVFLALTPQ*SLRLANSPWTS
Trigger: AGAGGTCCAAGGGCTATTCGCTAACCTGAGTGACAACTGAGGTGTGAGGGCCAGGAACACAAGTGGGTAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR TCA 90 bp TCACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACAGAGGGAGGTAAGTCTTaGGGGAAAGTTCTGGATGCC +
Preference number: 4 (lower is better)
Translates to: SQPKYHRHEMGWTGHTDTEGGKS*GKVLDA
Trigger: GGCATCCAGAACTTTCCCTCAAGACTTACCTCCCTC...TGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR TCA 90 bp GAAAATTCAGGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTTGCTCAGCGGCGGGCTaGGCAACTGGAGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: ENSGVWGQCALCSFILPSCSAAG*ATGVRG
Trigger: TCCCCTCACTCCAGTTGCTCAGCCCGCCGCTGAGCA...AGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAATTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp TCACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACACAAGTATCACAGGCATaGGATGGGATGGACAGGCCA +
Preference number: 4 (lower is better)
Translates to: SQPKYHRHEMGWTGHTDTQVSQA*DGMDRP
Trigger: TGGCCTGTCCATCCCATCTCATGCCTGTGATACTTG...TGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR TCA 90 bp TCACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACACCACCACACCGCTTGTaGTTCTCAGGTTGTACCTTG +
Preference number: 4 (lower is better)
Translates to: SQPKYHRHEMGWTGHTDTPPHRL*FSGCTL
Trigger: CAAGGTACAACCTGAGAATCACAAGCGGTGTGGTGG...TGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR GCA 90 bp CACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACACAGGGAAAGTTCTGGATaGCTGGGTTTACCCAGATGG +
Preference number: 4 (lower is better)
Translates to: HSPSITGMRWDGQATLTHRESSG*LGLPRW
Trigger: CCATCTGGGTAAACCCAGGCATCCAGAACTTTCCCT...GTGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR GCA 90 bp GCCCAAGTATCACAGGCCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTGGCATCCAAGCGAAATaGGTGAGGCCAGCCCGACCT +
Preference number: 4 (lower is better)
Translates to: AQVSQARQLMRRLDFSSVGIQAK*VRPARP
Trigger: AGGTCGGGCTGGCCTCACGCATTTCGCTTGGATGCC...AACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGCCTGTGATACTTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR GCA 90 bp GGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCAGGCATCCAAGCGAAATaGGTGAGGCCAGCCCGACCT +
Preference number: 4 (lower is better)
Translates to: GVWGQCALCSFILPSKQAGIQAK*VRPARP
Trigger: AGGTCGGGCTGGCCTCACGCATTTCGCTTGGATGCC...TGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR GCA 90 bp GCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTCTGTCAATTCCCTGGCCCACTaGTTCCAGCCTGGCGGTACC +
Preference number: 4 (lower is better)
Translates to: ALCSFILPSKQARSFCSVNSLAH*FQPGGT
Trigger: GGTACCGCCAGGCTGGAAGCAGTGGGCCAGGGAATT...GACAGAGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
CDS-3UTR GCA 90 bp GTGGGAATAAAACCAACCACAGGTCCCTCTTACCACAGAGTGGGTCCCAGGAGACTTGCCGTGATCCCATaGTGCCTCTTCCCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: VGIKPTTGPSYHRVGPRRLAVIP*CLFPSF
Trigger: GAAAGAAGGGAAGAGGCAGCATGGGATCACGGCAAG...TCTCCTGGGACCCACTCTGTGGTAAGAGGGACCTGTGGTTGGTTTTATTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR GCA 90 bp GTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACCAACAATGGTCTTCCTaGCCACCCCAGAGCCGGCAC +
Preference number: 4 (lower is better)
Translates to: VCGDNVHCAHLYYPLNRHQQWSS*PPQSRH
Trigger: GTGCCGGCTCTGGGGTGGGCAGGAAGACCATTGTTG...GTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR CCA 90 bp TGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAACAAGACCCGTTCCCTaGAGGCGCGCACAGACCCCT +
Preference number: 4 (lower is better)
Translates to: CGDNVHCAHLYYPLNRHETRPVP*RRAQTP
Trigger: AGGGGTCTGTGCGCGCCTCCAGGGAACGGGTCTTGT...TTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CCA 90 bp CCAGGAGACGCTTACCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTCCCCACTGCTTCCAGCCTaGCGGTACCTGTTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: PGDAYQTAHEKTGLFFCSPLLPA*RYLFRS
Trigger: GCTCCTAAACAGGTACCGCCAGGCTGGAAGCAGTGG...GGAACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGTAAGCGTCTCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574003.1
ENST00000575112.5
CDS-3UTR CCA 90 bp TGGGTCCCAGGAGACGCTTACCAGACAGCTCATGAGAAGACTGGACTTTTCTTCGTTCTGAGAATTCCCTaGCCCACTGCTTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: WVPGDAYQTAHEKTGLFFVLRIP*PTASSL
Trigger: CAGGCTGGAAGCAGTGGGCCAGGGAATTCTCAGAAC...GAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGTAAGCGTCTCCTGGGACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574003.1
ENST00000575112.5
CDS-3UTR CCA 90 bp GCTGCCCTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGGAAAATTCAGGTGTGTaGGGACAATGTGCACTGTGC +
Preference number: 4 (lower is better)
Translates to: AALLCFCPVSFRKSGASMENSGV*GQCALC
Trigger: GCACAGTGCACATTGTCCCCACACACCTGAATTTTC...CATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAGGGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS-3UTR CCA 90 bp CAGGTCCCTCTTACCACAGAGTGGGTCCCAGGAGACGCTTACCAGACAGCTCATGAAAATTCAGGTGTGTaGGGACAATGTGCACTGTGC +
Preference number: 4 (lower is better)
Translates to: QVPLTTEWVPGDAYQTAHENSGV*GQCALC
Trigger: GCACAGTGCACATTGTCCCCACACACCTGAATTTTC...ATGAGCTGTCTGGTAAGCGTCTCCTGGGACCCACTCTGTGGTAAGAGGGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574003.1
ENST00000575112.5
CDS-3UTR CCA 90 bp TCACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACAAGGCATGAGATGGGATaGACAGGCCACACTGACACA +
Preference number: 4 (lower is better)
Translates to: SQPKYHRHEMGWTGHTDTRHEMG*TGHTDT
Trigger: TGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCT...TGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR CCA 90 bp TCACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACAATCACAGGCATGAGATaGGATGGACAGGCCACACTG +
Preference number: 4 (lower is better)
Translates to: SQPKYHRHEMGWTGHTDTITGMR*DGQATL
Trigger: CAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGAT...TGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR CCA 90 bp CCTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGGCCTACAAGCTGATGGAAAATaGCATCCTTCCACCAAGGCC +
Preference number: 4 (lower is better)
Translates to: PAMLLPCFLPQKWCQHGLQADGK*HPSTKA
Trigger: GGCCTTGGTGGAAGGATGCCATTTTCCATCAGCTTG...TAGGCCATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR TCA 90 bp ACTGATCAAAGAAGAGCAGGTGTGGAGCCAGGCGTCCTAACTCCCAGACCAATCACTAGAAAGCTGTTCTaGGAATTCCCTGGCCCACTG +
Preference number: 4 (lower is better)
Translates to: TDQRRAGVEPGVLTPRPITRKLF*EFPGPL
Trigger: CAGTGGGCCAGGGAATTCTCAGAACAGCTTTCTAGT...GATTGGTCTGGGAGTTAGGACGCCTGGCTCCACACCTGCTCTTCTTTGATCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS-3UTR TCA 90 bp TCACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACAACTAGAAAGCTGTTCTaGGAATTCCCTGGCCCACTG +
Preference number: 4 (lower is better)
Translates to: SQPKYHRHEMGWTGHTDTTRKLF*EFPGPL
Trigger: CAGTGGGCCAGGGAATTCTCAGAACAGCTTTCTAGT...TGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR TCA 90 bp GTGGGAATAAAACCAACCACAGGTCCCTCTTACCACAGAGTGGGTCCCAGGAGAACTAGAAAGCTGTTCTaGGAATTCCCTGGCCCACTG +
Preference number: 4 (lower is better)
Translates to: VGIKPTTGPSYHRVGPRRTRKLF*EFPGPL
Trigger: CAGTGGGCCAGGGAATTCTCAGAACAGCTTTCTAGT...TCTCCTGGGACCCACTCTGTGGTAAGAGGGACCTGTGGTTGGTTTTATTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574003.1
ENST00000575112.5
CDS-3UTR TCA 90 bp TCCAAGCTGGCTCTAGAGGATCACAGCCCAAGTATCACAGGCCAGACAGCTCATACTAGAAAGCTGTTCTaGGAATTCCCTGGCCCACTG +
Preference number: 4 (lower is better)
Translates to: SKLALEDHSPSITGQTAHTRKLF*EFPGPL
Trigger: CAGTGGGCCAGGGAATTCTCAGAACAGCTTTCTAGT...ATGAGCTGTCTGGCCTGTGATACTTGGGCTGTGATCCTCTAGAGCCAGCTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp CCTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGGCCTATGGACAATTCTCCACTaGCTGCAAAGCATTCCACTC +
Preference number: 4 (lower is better)
Translates to: PAMLLPCFLPQKWCQHGLWTILH*LQSIPL
Trigger: GAGTGGAATGCTTTGCAGTCAGTGGAGAATTGTCCA...TAGGCCATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS-3UTR TCA 90 bp CACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACACTGGACAATTCTCCACTaGCTGCAAAGCATTCCACTC +
Preference number: 4 (lower is better)
Translates to: HSPSITGMRWDGQATLTHWTILH*LQSIPL
Trigger: GAGTGGAATGCTTTGCAGTCAGTGGAGAATTGTCCA...GTGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR TCA 90 bp ACTGATCAAAGAAGAGCAGGTGTGGAGCCAGGCGTCCTAACTCCCAGACCAATCTTGATCAGCTCCTGTTaGATTTCCTCCAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: TDQRRAGVEPGVLTPRPILISSC*ISSSTA
Trigger: GGCTGTGCTGGAGGAAATTCAACAGGAGCTGATCAA...GATTGGTCTGGGAGTTAGGACGCCTGGCTCCACACCTGCTCTTCTTTGATCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS-3UTR TCA 90 bp TCACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACATTGATCAGCTCCTGTTaGATTTCCTCCAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: SQPKYHRHEMGWTGHTDTLISSC*ISSSTA
Trigger: GGCTGTGCTGGAGGAAATTCAACAGGAGCTGATCAA...TGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR TCA 90 bp GCTGCCCTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGTGGACTGCTCTTGGTTaGTCAGCTCCTGTTGAATTT +
Preference number: 4 (lower is better)
Translates to: AALLCFCPVSFRKSGASMWTALG*SAPVEF
Trigger: AAATTCAACAGGAGCTGATCAACCAAGAGCAGTCCA...CATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAGGGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405578.8
CDS-3UTR TCA 90 bp TCACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACACCCCATAGAATGATGTaGGTCCAAGCTGGCTCTAGA +
Preference number: 4 (lower is better)
Translates to: SQPKYHRHEMGWTGHTDTPHRMM*VQAGSR
Trigger: TCTAGAGCCAGCTTGGACTCACATCATTCTATGGGG...TGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR TCA 90 bp ACTGATCAAAGAAGAGCAGGTGTGGAGCCAGGCGTCCTAACTCCCAGACCAATCCCACCACACCGCTTGTaGTTCTCAGGTTGTACTTTG +
Preference number: 4 (lower is better)
Translates to: TDQRRAGVEPGVLTPRPIPPHRL*FSGCTL
Trigger: CAAAGTACAACCTGAGAATCACAAGCGGTGTGGTGG...GATTGGTCTGGGAGTTAGGACGCCTGGCTCCACACCTGCTCTTCTTTGATCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405578.8
CDS-3UTR TCA 90 bp GCCCAAGTATCACAGGCCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTATGGACAGGCCACACTaGCACACCACCACACCGCTT +
Preference number: 4 (lower is better)
Translates to: AQVSQARQLMRRLDFSSVMDRPH*HTTTPL
Trigger: AAGCGGTGTGGTGGTGTGTCAGTGTGGCCTGTCCAT...AACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGCCTGTGATACTTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000571558.5
CDS-3UTR TCA 90 bp CTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGGCCTATTGTTCCTCCAGTGACTaGAAATTCAGGTGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: LLCFCPVSFRKSGASMAYCSSSD*KFRCVG
Trigger: CCCCACACACCTGAATTTTCAGTCACTGGAGGAACA...ATAGGCCATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS-3UTR TCA 90 bp TCCAAGCTGGCTCTAGAGGATCACAGCCCAAGTATCACAGGCCAGACAGCTCATTGTTCCTCCAGTGACTaGAAATTCAGGTGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: SKLALEDHSPSITGQTAHCSSSD*KFRCVG
Trigger: CCCCACACACCTGAATTTTCAGTCACTGGAGGAACA...ATGAGCTGTCTGGCCTGTGATACTTGGGCTGTGATCCTCTAGAGCCAGCTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp TGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTCTGCTGAGCAACTGGAGTaGGGGGAGCAGTTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: CALCSFILPSKQARSFCSAEQLE*GEQLGQ
Trigger: TTGGCCCAACTGCTCCCCTCACTCCAGTTGCTCAGC...AGAGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp CTCATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTGACTGAAAATTCAGGTTGCTCAGCGGCGGGCTaGGCAACTGGAGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: LMRRLDFSSVPPVTENSGCSAAG*ATGVRG
Trigger: TCCCCTCACTCCAGTTGCTCAGCCCGCCGCTGAGCA...ACCTGAATTTTCAGTCACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp TGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGGGCCGTCTGCTCGGTaGTTGGCCGAAACAGTGAGT +
Preference number: 4 (lower is better)
Translates to: CGDNVHCAHLYYPLNRHEGPSAR*LAETVS
Trigger: ACTCACTGTTTCGGCCAATCACCGAGCAGACGGCCC...TTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp ATTCAGGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACTTGGCTTTCCCTTGGTaGCGCCCCTGCTTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: IQVCGDNVHCAHLYYPLNLAFPW*RPCLVG
Trigger: GCCCACCAAGCAGGGGCGTCACCAAGGGAAAGCCAA...GTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp GGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTCCAATCCTCTTGCCGTaGTCCCATGCTGCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: GDNVHCAHLYYPLNRHEAPILLP*SHAASS
Trigger: GGAAGAGGCAGCATGGGATCACGGCAAGAGGATTGG...AGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR GCA 90 bp TGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTCTGAGGCCAGCCCGACCTaGACTGAGGGAGGTAAGTCT +
Preference number: 4 (lower is better)
Translates to: CALCSFILPSKQARSFCSEASPT*TEGGKS
Trigger: AGACTTACCTCCCTCAGTGCAGGTCGGGCTGGCCTC...AGAGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR GCA 90 bp TGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTCTGGCATCCAAGCGAAATaGGTGAGGCCAGCCCGACCT +
Preference number: 4 (lower is better)
Translates to: CALCSFILPSKQARSFCSGIQAK*VRPARP
Trigger: AGGTCGGGCTGGCCTCACGCATTTCGCTTGGATGCC...AGAGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR GCA 90 bp AGTATCACAGGCCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTCCTCCGGTGTACTTTCCGGGTaGAGACCGCGAATGGATCGC +
Preference number: 4 (lower is better)
Translates to: SITGQTAHEKTGLFFCSSGVLSG*RPRMDR
Trigger: GCGATCCATTCGCGGTCTGCACCCGGAAAGTACACC...GGAGGAACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGCCTGTGATACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR GCA 90 bp TGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAAGCTTCCGGGCCGTCTaGTCGGTGATTGGCCGAAAC +
Preference number: 4 (lower is better)
Translates to: CGDNVHCAHLYYPLNRHESFRAV*SVIGRN
Trigger: GTTTCGGCCAATCACCGAGCAGACGGCCCGGAAGCT...TTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR GCA 90 bp CAAGTATCACAGGCCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTCCTAGCTTCCGGGCCGTCTaGTCGGTGATTGGCCGAAAC +
Preference number: 4 (lower is better)
Translates to: QVSQARQLMRRLDFSSVPSFRAV*SVIGRN
Trigger: GTTTCGGCCAATCACCGAGCAGACGGCCCGGAAGCT...AGGAACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGCCTGTGATACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR GCA 90 bp TCTACCCCCACAACTCACCAGATCTCCATGTCTGTCCAGATCGATTCCATGCTTCTTCCGCAAAAGTGGTaGCAGCATGGCCTATCTGGG +
Preference number: 4 (lower is better)
Translates to: STPTTHQISMSVQIDSMLLPQKW*QHGLSG
Trigger: CCCAGATAGGCCATGCTGGCACCACTTTTGCGGAAG...AAGCATGGAATCGATCTGGACAGACATGGAGATCTGGTGAGTTGTGGGGGTAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR GCA 90 bp ACTGATCAAAGAAGAGCAGGTGTGGAGCCAGGCGTCCTAACTCCCAGACCAATCAATGCTGCCCTGCTATaGTTCTGCCCTGTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: TDQRRAGVEPGVLTPRPINAALL*FCPVSF
Trigger: GAAGGAAACAGGGCAGAAGCATAGCAGGGCAGCATT...GATTGGTCTGGGAGTTAGGACGCCTGGCTCCACACCTGCTCTTCTTTGATCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS-3UTR GCA 90 bp ACAGAGTGGGTCCCAGGAGACGCTTACCAGACAGCTCATGAGAAGACTGGACTTCAGGCACGAAGCTTCTaGTCTGTCAACTCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: TEWVPGDAYQTAHEKTGLQARSF*SVNSED
Trigger: GTCTTCTGAGTTGACAGAGCAGAAGCTTCGTGCCTG...AAGTCCAGTCTTCTCATGAGCTGTCTGGTAAGCGTCTCCTGGGACCCACTCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574003.1
CDS-3UTR CCA 90 bp GTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGGTGCAGACCGCGAATaGATCGCAGCGTATTCTGGG +
Preference number: 4 (lower is better)
Translates to: VCGDNVHCAHLYYPLNRHGADRE*IAAYSG
Trigger: CCCAGAATACGCTGCGATCCATTCGCGGTCTGCACC...GTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CCA 90 bp GCCCAAGTATCACAGGCCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTCCACTGCTTCCAGCCTaGCGGTACCTGTTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: AQVSQARQLMRRLDFSSVPLLPA*RYLFRS
Trigger: GCTCCTAAACAGGTACCGCCAGGCTGGAAGCAGTGG...AACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGCCTGTGATACTTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CCA 90 bp CCTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGGCCTAAAGAATGAGATGGGATaGACAGGCCACACTGACACA +
Preference number: 4 (lower is better)
Translates to: PAMLLPCFLPQKWCQHGLKNEMG*TGHTDT
Trigger: TGTGTCAGTGTGGCCTGTCCATCCCATCTCATTCTT...TAGGCCATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS-3UTR CCA 90 bp AATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTGGCCGAAACAGTGAGTaGACGGCCGCGGATTGGCTG +
Preference number: 4 (lower is better)
Translates to: NVHCAHLYYPLNRHEASAGRNSE*TAADWL
Trigger: CAGCCAATCCGCGGCCGTCCACTCACTGTTTCGGCC...AGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CCA 90 bp GAAAATTCAGGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAGGCGTGAGCCACCGTaGCCAGCTGAGACTGGCCAA +
Preference number: 4 (lower is better)
Translates to: ENSGVWGQCALCSFILPSRREPP*PAETGQ
Trigger: TTGGCCAGTCTCAGCTGGCCACGGTGGCTCACGCCT...AGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAATTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR CCA 90 bp GTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGACCCTGTTGCCCAGGCTaGAATCCAGCAGCACGATCT +
Preference number: 4 (lower is better)
Translates to: VWGQCALCSFILPSKQARPCCPG*NPAARS
Trigger: AGATCGTGCTGCTGGATTCCAGCCTGGGCAACAGGG...TCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR CCA 90 bp GACGCTTACCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTCAGGCTGGAGAGCAGTaGCGTAATCTCTGCTCACCG +
Preference number: 4 (lower is better)
Translates to: DAYQTAHEKTGLFFCSSSQAGEQ*RNLCSP
Trigger: CGGTGAGCAGAGATTACGCCACTGCTCTCCAGCCTG...ACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGTAAGCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR CCA 90 bp GTGGGAATAAAACCAACCACAGGTCCCTCTTACCACAGAGTGGGTCCCAGGAGACTGGTCTTGAATTCCTaGCCTCAAGTGATCCTCCCA +
Preference number: 4 (lower is better)
Translates to: VGIKPTTGPSYHRVGPRRLVLNS*PQVILP
Trigger: TGGGAGGATCACTTGAGGCCAGGAATTCAAGACCAG...TCTCCTGGGACCCACTCTGTGGTAAGAGGGACCTGTGGTTGGTTTTATTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR CCA 90 bp ACAGGAACTATCCTCTCCCTCATGAACCTAATGCTCCAGCTAAGTAGAACAAGACAGCCTGGAGCGCAATaGCGCCCTCTCAGCTCACTG +
Preference number: 4 (lower is better)
Translates to: TGTILSLMNLMLQLSRTRQPGAQ*RPLSSL
Trigger: CAGTGAGCTGAGAGGGCGCCATTGCGCTCCAGGCTG...TCTTGTTCTACTTAGCTGGAGCATTAGGTTCATGAGGGAGAGGATAGTTCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR TCA 90 bp ATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTGACTGAAAATTCAGGTGTGTCCAAGCGAAATGCGTaGGGCCAGCCCGACCTGCAC +
Preference number: 4 (lower is better)
Translates to: MRRLDFSSVPPVTENSGVSKRNA*GQPDLH
Trigger: GTGCAGGTCGGGCTGGCCTCACGCATTTCGCTTGGA...CACACCTGAATTTTCAGTCACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp TCACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACATTCAACCCCATAGAATaGTGTGAGTCCAAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: SQPKYHRHEMGWTGHTDTFNPIE*CESKLA
Trigger: AGCCAGCTTGGACTCACATCATTCTATGGGGTTGAA...TGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR TCA 90 bp CCTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGGCCTACTTCTGTTCCTCCAGTaGCTGAAAATTCAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: PAMLLPCFLPQKWCQHGLLLFLQ*LKIQVC
Trigger: ACACACCTGAATTTTCAGTCACTGGAGGAACAGAAG...TAGGCCATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS-3UTR TCA 90 bp ATTCAGGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACGCTGAGCAACTGGAGTaGGGGGAGCAGTTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: IQVCGDNVHCAHLYYPLNAEQLE*GEQLGQ
Trigger: TTGGCCCAACTGCTCCCCTCACTCCAGTTGCTCAGC...GTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp ATTCAGGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACGATTGGCCGAAACAGTaGGTGGACGGCCGCGGATTG +
Preference number: 4 (lower is better)
Translates to: IQVCGDNVHCAHLYYPLNDWPKQ*VDGRGL
Trigger: CAATCCGCGGCCGTCCACTCACTGTTTCGGCCAATC...GTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp AATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTGATTGGCCGAAACAGTaGGTGGACGGCCGCGGATTG +
Preference number: 4 (lower is better)
Translates to: NVHCAHLYYPLNRHEASADWPKQ*VDGRGL
Trigger: CAATCCGCGGCCGTCCACTCACTGTTTCGGCCAATC...AGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp GAAAATTCAGGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTGGGCCGTCTGCTCGGTaGTTGGCCGAAACAGTGAGT +
Preference number: 4 (lower is better)
Translates to: ENSGVWGQCALCSFILPSGPSAR*LAETVS
Trigger: ACTCACTGTTTCGGCCAATCACCGAGCAGACGGCCC...AGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp CTCATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTGACTGAAAATTCAGGTTTGGCTTTCCCTTGGTaGCGCCCCTGCTTGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LMRRLDFSSVPPVTENSGLAFPW*RPCLVG
Trigger: GCCCACCAAGCAGGGGCGTCACCAAGGGAAAGCCAA...ACCTGAATTTTCAGTCACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp GCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTCTGTCGAGATCACCCTCCTCTaGACTCCCATAAGCCCTCCT +
Preference number: 4 (lower is better)
Translates to: ALCSFILPSKQARSFCSVEITLL*TPISPP
Trigger: AGGAGGGCTTATGGGAGTTCAGAGGAGGGTGATCTC...GACAGAGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR TCA 90 bp GCCTGTTTATTCTGTTCTCTTATTACCAACCCAAGGCTTGAGCTCTGTGAGAGACCTTCCACCAAGGCCTaGGCCTGGAGCAGGAAACAG +
Preference number: 4 (lower is better)
Translates to: ACLFCSLITNPRLELCERPSTKA*AWSRKQ
Trigger: CTGTTTCCTGCTCCAGGCTCAGGCCTTGGTGGAAGG...TCTCTCACAGAGCTCAAGCCTTGGGTTGGTAATAAGAGAACAGAATAAACAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR TCA 90 bp ACAGAGTGGGTCCCAGGAGACGCTTACCAGACAGCTCATGAGAAGACTGGACTTAACAGCACAGAGGCCTaGAAGCACTGCATATTTGAG +
Preference number: 4 (lower is better)
Translates to: TEWVPGDAYQTAHEKTGLNSTEA*KHCIFE
Trigger: CTCAAATATGCAGTGCTTTCAGGCCTCTGTGCTGTT...AAGTCCAGTCTTCTCATGAGCTGTCTGGTAAGCGTCTCCTGGGACCCACTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR TCA 90 bp CCTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGGCCTATGTGAGGAATCAGGCTaGATGAAGTACACGGCATAT +
Preference number: 4 (lower is better)
Translates to: PAMLLPCFLPQKWCQHGLCEESG*MKYTAY
Trigger: ATATGCCGTGTACTTCATTCAGCCTGATTCCTCACA...TAGGCCATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR TCA 90 bp GTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACCTGGTCTTGAACTCCTaGCCTCAGATGATCCGACCG +
Preference number: 4 (lower is better)
Translates to: VCGDNVHCAHLYYPLNRHLVLNS*PQMIRP
Trigger: CGGTCGGATCATCTGAGGTCAGGAGTTCAAGACCAG...GTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR GCA 90 bp TGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTCTGGTGTACTTTCCGGGTaGAGACCGCGAATGGATCGC +
Preference number: 4 (lower is better)
Translates to: CALCSFILPSKQARSFCSGVLSG*RPRMDR
Trigger: GCGATCCATTCGCGGTCTGCACCCGGAAAGTACACC...AGAGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR GCA 90 bp GAAAATTCAGGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAATTCCCTGGCCCACTaGTTCCAGCCTGGCGGTACC +
Preference number: 4 (lower is better)
Translates to: ENSGVWGQCALCSFILPSNSLAH*FQPGGT
Trigger: GGTACCGCCAGGCTGGAAGCAGTGGGCCAGGGAATT...AGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
CDS-3UTR GCA 90 bp TGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTCTGTCAACTCAAATTCCCTGGCCCACTaGTTCCAGCCTGGCGGTACC +
Preference number: 4 (lower is better)
Translates to: CSFILPSKQARSFCSVNSNSLAH*FQPGGT
Trigger: GGTACCGCCAGGCTGGAAGCAGTGGGCCAGGGAATT...TGAGTTGACAGAGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571558.5
ENST00000575112.5
CDS-3UTR GCA 90 bp ACTGATCAAAGAAGAGCAGGTGTGGAGCCAGGCGTCCTAACTCCCAGACCAATCCAGGCACGAAGCTTCTaGTCTGTCAACTCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: TDQRRAGVEPGVLTPRPIQARSF*SVNSEE
Trigger: TTCTTCTGAGTTGACAGAGCAGAAGCTTCGTGCCTG...GATTGGTCTGGGAGTTAGGACGCCTGGCTCCACACCTGCTCTTCTTTGATCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS-3UTR GCA 90 bp GCTGCCCTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGGGACAATGTGCACTGTaGTCATTTATACTACCCTCT +
Preference number: 4 (lower is better)
Translates to: AALLCFCPVSFRKSGASMGQCAL*SFILPS
Trigger: AGAGGGTAGTATAAATGAGCACAGTGCACATTGTCC...CATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAGGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS-3UTR GCA 90 bp GGGTCCCAGGAGACGCTTACCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTCAAGGCCAAGTTAAATaGCTCCTCCAGGAAGGTGTC +
Preference number: 4 (lower is better)
Translates to: GSQETLTRQLMRRLDFSSQGQVK*LLQEGV
Trigger: GACACCTTCCTGGAGGAGGCATTTAACTTGGCCTTG...AGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGTAAGCGTCTCCTGGGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR GCA 90 bp CCAGGAGACGCTTACCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTCCTGGCCAGTTCCCCTCTaGCAGCCCTCATTAGGTTTA +
Preference number: 4 (lower is better)
Translates to: PGDAYQTAHEKTGLFFCSWPVPL*QPSLGL
Trigger: TAAACCTAATGAGGGCTGGCAGAGGGGAACTGGCCA...GGAACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGTAAGCGTCTCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR GCA 90 bp GTGGGAATAAAACCAACCACAGGTCCCTCTTACCACAGAGTGGGTCCCAGGAGACTCAGCCTTCCTAAATaGTGGGGTTACAGGTGTGAA +
Preference number: 4 (lower is better)
Translates to: VGIKPTTGPSYHRVGPRRLSLPK*WGYRCE
Trigger: TTCACACCTGTAACCCCAGCATTTAGGAAGGCTGAG...TCTCCTGGGACCCACTCTGTGGTAAGAGGGACCTGTGGTTGGTTTTATTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR CCA 90 bp TCACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACACTGGGTTTACCCAGATaGAGGTGTCCAATAGGCAAT +
Preference number: 4 (lower is better)
Translates to: SQPKYHRHEMGWTGHTDTLGLPR*RCPIGN
Trigger: ATTGCCTATTGGACACCTCCATCTGGGTAAACCCAG...TGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR CCA 90 bp ATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTGACTGAAAATTCAGGTGTGGGCGGGCTGAGCAACTaGAGTGAGGGGAGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: MRRLDFSSVPPVTENSGVGGLSN*SEGSSW
Trigger: CCAACTGCTCCCCTCACTCCAGTTGCTCAGCCCGCC...CACACCTGAATTTTCAGTCACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CCA 90 bp GTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGACTCGTCCCGCCCCCTTaGGCTTCAGAAATAATGGTG +
Preference number: 4 (lower is better)
Translates to: VWGQCALCSFILPSKQARLVPPP*ASEIMV
Trigger: CACCATTATTTCTGAAGCCCAAGGGGGCGGGACGAG...TCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CCA 90 bp GTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACCCTCTTACCACAGAGTaGGTCCCAGGAGACGCTTAC +
Preference number: 4 (lower is better)
Translates to: VCGDNVHCAHLYYPLNRHPLTTE*VPGDAY
Trigger: GTAAGCGTCTCCTGGGACCCACTCTGTGGTAAGAGG...GTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574003.1
ENST00000575112.5
CDS-3UTR CCA 90 bp ACCAACCACAGGTCCCTCTTACCACAGAGTGGGTCCCAGGAGACGCTTACCAGATTAGCGAATAGCCCTTaGACCTCTGTAAAAACTCCA +
Preference number: 4 (lower is better)
Translates to: TNHRSLLPQSGSQETLTRLANSP*TSVKTP
Trigger: TGGAGTTTTTACAGAGGTCCAAGGGCTATTCGCTAA...TCTGGTAAGCGTCTCCTGGGACCCACTCTGTGGTAAGAGGGACCTGTGGTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR TCA 90 bp AGTATCACAGGCCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTCCTCCGAGGGAGGTAAGTCTTaGGGGAAAGTTCTGGATGCC +
Preference number: 4 (lower is better)
Translates to: SITGQTAHEKTGLFFCSSEGGKS*GKVLDA
Trigger: GGCATCCAGAACTTTCCCTCAAGACTTACCTCCCTC...GGAGGAACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGCCTGTGATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp GAAAATTCAGGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTATGGACAGGCCACACTaGCACACCACCACACCGCTT +
Preference number: 4 (lower is better)
Translates to: ENSGVWGQCALCSFILPSMDRPH*HTTTPL
Trigger: AAGCGGTGTGGTGGTGTGTCAGTGTGGCCTGTCCAT...AGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571558.5
ENST00000575112.5
CDS-3UTR TCA 90 bp CTCATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTGACTGAAAATTCAGGTGCTGAGCAACTGGAGTaGGGGGAGCAGTTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: LMRRLDFSSVPPVTENSGAEQLE*GEQLGQ
Trigger: TTGGCCCAACTGCTCCCCTCACTCCAGTTGCTCAGC...ACCTGAATTTTCAGTCACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp ATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTGACTGAAAATTCAGGTGTGGGGCCGTCTGCTCGGTaGTTGGCCGAAACAGTGAGT +
Preference number: 4 (lower is better)
Translates to: MRRLDFSSVPPVTENSGVGPSAR*LAETVS
Trigger: ACTCACTGTTTCGGCCAATCACCGAGCAGACGGCCC...CACACCTGAATTTTCAGTCACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp AATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTGCACCACCATTATGTTaGCTTCTCGTCCCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: NVHCAHLYYPLNRHEASAAPPLC*LLVPPP
Trigger: AGGGGGCGGGACGAGAAGTCAACATAATGGTGGTGC...AGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp GAAAATTCAGGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTGCACCACCATTATGTTaGCTTCTCGTCCCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: ENSGVWGQCALCSFILPSAPPLC*LLVPPP
Trigger: AGGGGGCGGGACGAGAAGTCAACATAATGGTGGTGC...AGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAATTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp CACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACACAGGTTGTACCTTGGTTaGTCAGCTCCTGTTGAATTT +
Preference number: 4 (lower is better)
Translates to: HSPSITGMRWDGQATLTHRLYLG*SAPVEF
Trigger: AAATTCAACAGGAGCTGATCAACCAAGGTACAACCT...GTGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR TCA 90 bp CAGAGTGGGTCCCAGGAGACGCTTACCAGACAGCTCATGAGAAGACTGGACTTTGGAATGACAGGGCCATaGAGGAATTCTAAATTCCCA +
Preference number: 4 (lower is better)
Translates to: QSGSQETLTRQLMRRLDFGMTGP*RNSKFP
Trigger: TGGGAATTTAGAATTCCTTCATGGCCCTGTCATTCC...AAAGTCCAGTCTTCTCATGAGCTGTCTGGTAAGCGTCTCCTGGGACCCACTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR TCA 90 bp GTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAACAGGTGACATGGCATaGGGTACGGTGAAAGCCCAA +
Preference number: 4 (lower is better)
Translates to: VWGQCALCSFILPSKQARTGDMA*GTVKAQ
Trigger: TTGGGCTTTCACCGTACCTCATGCCATGTCACCTGT...TCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR TCA 90 bp TCTACCCCCACAACTCACCAGATCTCCATGTCTGTCCAGATCGATTCCATGCTTCAACACTGTTACAGGTaGCATGGCATGAGGTACGGT +
Preference number: 4 (lower is better)
Translates to: STPTTHQISMSVQIDSMLQHCYR*HGMRYG
Trigger: ACCGTACCTCATGCCATGTCACCTGTAACAGTGTTG...AAGCATGGAATCGATCTGGACAGACATGGAGATCTGGTGAGTTGTGGGGGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR TCA 90 bp AATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTGAAGCCAAAGCCAGCTaGCCTGTGCCTCAACTCTCC +
Preference number: 4 (lower is better)
Translates to: NVHCAHLYYPLNRHEASAEAKAS*PVPQLS
Trigger: GGAGAGTTGAGGCACAGGTCAGCTGGCTTTGGCTTC...AGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR GCA 90 bp CCTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGGCCTACAATTCTCCACTGACTaGAAAGCATTCCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: PAMLLPCFLPQKWCQHGLQFSTD*KAFHSS
Trigger: AGAAGAGTGGAATGCTTTGCAGTCAGTGGAGAATTG...TAGGCCATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS-3UTR GCA 90 bp CTCATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTGACTGAAAATTCAGGTAGCTTCCGGGCCGTCTaGTCGGTGATTGGCCGAAAC +
Preference number: 4 (lower is better)
Translates to: LMRRLDFSSVPPVTENSGSFRAV*SVIGRN
Trigger: GTTTCGGCCAATCACCGAGCAGACGGCCCGGAAGCT...ACCTGAATTTTCAGTCACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR GCA 90 bp TCTATCAAGGTGGGAATAAAACCAACCACAGGTCCCTCTTACCACAGAGTGGGTAGAATCTCACCCTGTTaGCCAGGCTGGAATCCAGCA +
Preference number: 4 (lower is better)
Translates to: SIKVGIKPTTGPSYHRVGRISPC*PGWNPA
Trigger: TGCTGGATTCCAGCCTGGGCAACAGGGTGAGATTCT...ACCCACTCTGTGGTAAGAGGGACCTGTGGTTGGTTTTATTCCCACCTTGATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR GCA 90 bp TCTACCCCCACAACTCACCAGATCTCCATGTCTGTCCAGATCGATTCCATGCTTGATCTCCAAGACTGCTaGACAGCACTCACCTTCCAA +
Preference number: 4 (lower is better)
Translates to: STPTTHQISMSVQIDSMLDLQDC*TALTFQ
Trigger: TTGGAAGGTGAGTGCTGTGCAGCAGTCTTGGAGATC...AAGCATGGAATCGATCTGGACAGACATGGAGATCTGGTGAGTTGTGGGGGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR CCA 90 bp ATTCAGGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACGGTGCAGACCGCGAATaGATCGCAGCGTATTCTGGG +
Preference number: 4 (lower is better)
Translates to: IQVCGDNVHCAHLYYPLNGADRE*IAAYSG
Trigger: CCCAGAATACGCTGCGATCCATTCGCGGTCTGCACC...GTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CCA 90 bp AATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTGGTGCAGACCGCGAATaGATCGCAGCGTATTCTGGG +
Preference number: 4 (lower is better)
Translates to: NVHCAHLYYPLNRHEASAGADRE*IAAYSG
Trigger: CCCAGAATACGCTGCGATCCATTCGCGGTCTGCACC...AGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CCA 90 bp AGTATCACAGGCCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTCCTCCTACAGGACAGATGAGTaGGTTTGCCTCCCACTCAGC +
Preference number: 4 (lower is better)
Translates to: SITGQTAHEKTGLFFCSSYRTDE*VCLPLS
Trigger: GCTGAGTGGGAGGCAAACCCACTCATCTGTCCTGTA...GGAGGAACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGCCTGTGATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539417.6
CDS-3UTR CCA 90 bp TGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAACTCGTCCCGCCCCCTTaGGCTTCAGAAATAATGGTG +
Preference number: 4 (lower is better)
Translates to: CGDNVHCAHLYYPLNRHELVPPP*ASEIMV
Trigger: CACCATTATTTCTGAAGCCCAAGGGGGCGGGACGAG...TTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp GTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAACTAGAAAGCTGTTCTaGGAATTCCCTGGCCCACTG +
Preference number: 4 (lower is better)
Translates to: VWGQCALCSFILPSKQARTRKLF*EFPGPL
Trigger: CAGTGGGCCAGGGAATTCTCAGAACAGCTTTCTAGT...TCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
CDS-3UTR TCA 90 bp AGTATCACAGGCCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTCCTCCTTGATCAGCTCCTGTTaGATTTCCTCCAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: SITGQTAHEKTGLFFCSSLISSC*ISSSTA
Trigger: GGCTGTGCTGGAGGAAATTCAACAGGAGCTGATCAA...GGAGGAACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGCCTGTGATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp GGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTGTTCCTCCAGTGACTaGAAATTCAGGTGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: GDNVHCAHLYYPLNRHEACSSSD*KFRCVG
Trigger: CCCCACACACCTGAATTTTCAGTCACTGGAGGAACA...AGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
CDS-3UTR TCA 90 bp GGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCATGTTCCTCCAGTGACTaGAAATTCAGGTGTGTGGGG +
Preference number: 4 (lower is better)
Translates to: GVWGQCALCSFILPSKQACSSSD*KFRCVG
Trigger: CCCCACACACCTGAATTTTCAGTCACTGGAGGAACA...TGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
CDS-3UTR TCA 90 bp ATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTGACTGAAAATTCAGGTGTGGCACCACCATTATGTTaGCTTCTCGTCCCGCCCCCT +
Preference number: 4 (lower is better)
Translates to: MRRLDFSSVPPVTENSGVAPPLC*LLVPPP
Trigger: AGGGGGCGGGACGAGAAGTCAACATAATGGTGGTGC...CACACCTGAATTTTCAGTCACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp ACTGATCAAAGAAGAGCAGGTGTGGAGCCAGGCGTCCTAACTCCCAGACCAATCTTACCAGACAGCTCATaGGAAGACTGGACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: TDQRRAGVEPGVLTPRPILPDSS*EDWTFL
Trigger: AAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGTAA...GATTGGTCTGGGAGTTAGGACGCCTGGCTCCACACCTGCTCTTCTTTGATCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS-3UTR TCA 90 bp CTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGGCCTATTTACCAGACAGCTCATaGGAAGACTGGACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LLCFCPVSFRKSGASMAYLPDSS*EDWTFL
Trigger: AAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGTAA...ATAGGCCATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS-3UTR TCA 90 bp ACTGATCAAAGAAGAGCAGGTGTGGAGCCAGGCGTCCTAACTCCCAGACCAATCCAAAACCACTACTACTaGTCAAAGAAGAGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: TDQRRAGVEPGVLTPRPIQNHYY*SKKSRC
Trigger: ACACCTGCTCTTCTTTGATCAGTAGTAGTGGTTTTG...GATTGGTCTGGGAGTTAGGACGCCTGGCTCCACACCTGCTCTTCTTTGATCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS-3UTR TCA 90 bp ACAGAGTGGGTCCCAGGAGACGCTTACCAGACAGCTCATGAGAAGACTGGACTTAGGTTGTACCTTGGTTaGTCAGCTCCTGTTGAATTT +
Preference number: 4 (lower is better)
Translates to: TEWVPGDAYQTAHEKTGLRLYLG*SAPVEF
Trigger: AAATTCAACAGGAGCTGATCAACCAAGGTACAACCT...AAGTCCAGTCTTCTCATGAGCTGTCTGGTAAGCGTCTCCTGGGACCCACTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR TCA 90 bp TCTACCCCCACAACTCACCAGATCTCCATGTCTGTCCAGATCGATTCCATGCTTCTGGCCAATTCCTTGTaGGGAATCAGGCTGAATGAA +
Preference number: 4 (lower is better)
Translates to: STPTTHQISMSVQIDSMLLANSL*GIRLNE
Trigger: TTCATTCAGCCTGATTCCTCACAAGGAATTGGCCAG...AAGCATGGAATCGATCTGGACAGACATGGAGATCTGGTGAGTTGTGGGGGTAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR TCA 90 bp AATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTTGGCATGAGGTACGGTaGAAGCCCAAGGAGAGACTG +
Preference number: 4 (lower is better)
Translates to: NVHCAHLYYPLNRHEASAWHEVR*KPKERL
Trigger: CAGTCTCTCCTTGGGCTTTCACCGTACCTCATGCCA...AGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR GCA 90 bp GTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGGGAAAGTTCTGGATaGCTGGGTTTACCCAGATGG +
Preference number: 4 (lower is better)
Translates to: VWGQCALCSFILPSKQARRESSG*LGLPRW
Trigger: CCATCTGGGTAAACCCAGGCATCCAGAACTTTCCCT...TCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR GCA 90 bp TCACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACACAATTCTCCACTGACTaGAAAGCATTCCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: SQPKYHRHEMGWTGHTDTQFSTD*KAFHSS
Trigger: AGAAGAGTGGAATGCTTTGCAGTCAGTGGAGAATTG...TGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR GCA 90 bp GAGTGGGTCCCAGGAGACGCTTACCAGACAGCTCATGAGAAGACTGGACTTTTCGGACAATGTGCACTGTaGTCATTTATACTACCCTCT +
Preference number: 4 (lower is better)
Translates to: EWVPGDAYQTAHEKTGLFGQCAL*SFILPS
Trigger: AGAGGGTAGTATAAATGAGCACAGTGCACATTGTCC...GAAAAGTCCAGTCTTCTCATGAGCTGTCTGGTAAGCGTCTCCTGGGACCCACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574003.1
ENST00000575112.5
CDS-3UTR GCA 90 bp GAAAATTCAGGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTCCAGACCAATCCTCTTaGCGTGATCCCATGCTGCCT +
Preference number: 4 (lower is better)
Translates to: ENSGVWGQCALCSFILPSPDQSS*RDPMLP
Trigger: AGGCAGCATGGGATCACGGCAAGAGGATTGGTCTGG...AGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR GCA 90 bp GTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACCAGGCACGAAGCTTCTaGTCTGTCAACTCAGAAGAC +
Preference number: 4 (lower is better)
Translates to: VCGDNVHCAHLYYPLNRHQARSF*SVNSED
Trigger: GTCTTCTGAGTTGACAGAGCAGAAGCTTCGTGCCTG...GTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574003.1
ENST00000575599.5
CDS-3UTR GCA 90 bp TGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTCTTCCCAAGGCTCCCCCTaGCTGGGATCTAAAAGCAAT +
Preference number: 4 (lower is better)
Translates to: CALCSFILPSKQARSFCSSQGSP*LGSKSN
Trigger: ATTGCTTTTAGATCCCAGGCAGGGGGAGCCTTGGGA...AGAGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR GCA 90 bp GGGTCCCAGGAGACGCTTACCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTAGCTCTCCAGGGTACTaGCTGTTTATTCTGTTCTCT +
Preference number: 4 (lower is better)
Translates to: GSQETLTRQLMRRLDFSSSSPGY*LFILFS
Trigger: AGAGAACAGAATAAACAGGCAGTACCCTGGAGAGCT...AGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGTAAGCGTCTCCTGGGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR GCA 90 bp ATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTGACTGAAAATTCAGGTGTGTTCAAGCGATTCTCCTaGCCCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: MRRLDFSSVPPVTENSGVFKRFS*PSLPSS
Trigger: GCTACTCGGGAGGCTGGGGCAGGAGAATCGCTTGAA...CACACCTGAATTTTCAGTCACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR GCA 90 bp CACTCAAGGGGACTTTCATACTCAAGGAGCTGTAGACTCCAGCTCTGCTACCATTATGATCTCCAAGACTaGTGCACAGCACTCACCTTC +
Preference number: 4 (lower is better)
Translates to: HSRGLSYSRSCRLQLCYHYDLQD*CTALTF
Trigger: GAAGGTGAGTGCTGTGCAGCAGTCTTGGAGATCATA...ATGGTAGCAGAGCTGGAGTCTACAGCTCCTTGAGTATGAAAGTCCCCTTGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR GCA 90 bp GCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTCTGTCTGTGTTTCTCATATTTaGTGTGACCCCCACCTCCCC +
Preference number: 4 (lower is better)
Translates to: ALCSFILPSKQARSFCSVCVSHI*CDPHLP
Trigger: GGGGAGGTGGGGGTCACAGCAAATATGAGAAACACA...GACAGAGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR GCA 90 bp TGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTCTGTCAACTCAGCTCACTGCAACCTCTaGCTCCTGAGCTCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: CSFILPSKQARSFCSVNSAHCNL*LLSSSH
Trigger: ATGGCTTGAGCTCAGGAGGCAGAGGTTGCAGTGAGC...TGAGTTGACAGAGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR CCA 90 bp ACAGGCCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTGACCTGGGTTTACCCAGATaGAGGTGTCCAATAGGCAAT +
Preference number: 4 (lower is better)
Translates to: TGQTAHEKTGLFFCSSSDLGLPR*RCPIGN
Trigger: ATTGCCTATTGGACACCTCCATCTGGGTAAACCCAG...GTCACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CCA 90 bp GTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACCTTGAGGGAAAGTTCTaGATGCCTGGGTTTACCCAG +
Preference number: 4 (lower is better)
Translates to: VCGDNVHCAHLYYPLNRHLEGKF*MPGFTQ
Trigger: CTGGGTAAACCCAGGCATCCAGAACTTTCCCTCAAG...GTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CCA 90 bp TCACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACAGATCGCAGCGTATTCTaGGAAGTGTTGTTTTATCGA +
Preference number: 4 (lower is better)
Translates to: SQPKYHRHEMGWTGHTDTDRSVF*EVLFYR
Trigger: TCGATAAAACAACACTTCCCAGAATACGCTGCGATC...TGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR CCA 90 bp ATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTGACTGAAAATTCAGGTGTGCCACTGCTTCCAGCCTaGCGGTACCTGTTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: MRRLDFSSVPPVTENSGVPLLPA*RYLFRS
Trigger: GCTCCTAAACAGGTACCGCCAGGCTGGAAGCAGTGG...CACACCTGAATTTTCAGTCACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
CDS-3UTR CCA 90 bp CTCATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTGACTGAAAATTCAGGTCCACTGCTTCCAGCCTaGCGGTACCTGTTTAGGAGC +
Preference number: 4 (lower is better)
Translates to: LMRRLDFSSVPPVTENSGPLLPA*RYLFRS
Trigger: GCTCCTAAACAGGTACCGCCAGGCTGGAAGCAGTGG...ACCTGAATTTTCAGTCACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
CDS-3UTR CCA 90 bp AATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTGTTCTGAGAATTCCCTaGCCCACTGCTTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: NVHCAHLYYPLNRHEASAVLRIP*PTASSL
Trigger: CAGGCTGGAAGCAGTGGGCCAGGGAATTCTCAGAAC...AGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
CDS-3UTR CCA 90 bp ACTGATCAAAGAAGAGCAGGTGTGGAGCCAGGCGTCCTAACTCCCAGACCAATCTCCCTTCTTTCTGACTaGCCTTTGAGTCTAAATGAC +
Preference number: 4 (lower is better)
Translates to: TDQRRAGVEPGVLTPRPISLLSD*PLSLND
Trigger: GTCATTTAGACTCAAAGGCCAGTCAGAAAGAAGGGA...GATTGGTCTGGGAGTTAGGACGCCTGGCTCCACACCTGCTCTTCTTTGATCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS-3UTR CCA 90 bp GACGCTTACCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTTTCCTTCCGCAAAAGTaGTGCCAGCATGGCCTATCT +
Preference number: 4 (lower is better)
Translates to: DAYQTAHEKTGLFFCSSSFLPQK*CQHGLS
Trigger: AGATAGGCCATGCTGGCACCACTTTTGCGGAAGGAA...ACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGTAAGCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR CCA 90 bp CTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGGCCTATTTAGCGAATAGCCCTTaGACCTCTGTAAAAACTCCA +
Preference number: 4 (lower is better)
Translates to: LLCFCPVSFRKSGASMAYLANSP*TSVKTP
Trigger: TGGAGTTTTTACAGAGGTCCAAGGGCTATTCGCTAA...ATAGGCCATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS-3UTR CCA 90 bp GGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTGGAACCACAAAGACCTaGGGTCTAACACCAGCTCTA +
Preference number: 4 (lower is better)
Translates to: GDNVHCAHLYYPLNRHEAGTTKT*GLTPAL
Trigger: TAGAGCTGGTGTTAGACCCCAGGTCTTTGTGGTTCC...AGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR CCA 90 bp TGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAATCACTTACCCAACAATaGTCTTCCTGCCCACCCCAG +
Preference number: 4 (lower is better)
Translates to: CGDNVHCAHLYYPLNRHESLTQQ*SSCPPQ
Trigger: CTGGGGTGGGCAGGAAGACCATTGTTGGGTAAGTGA...TTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR TCA 90 bp AATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTGAGGGAGGTAAGTCTTaGGGGAAAGTTCTGGATGCC +
Preference number: 4 (lower is better)
Translates to: NVHCAHLYYPLNRHEASAEGGKS*GKVLDA
Trigger: GGCATCCAGAACTTTCCCTCAAGACTTACCTCCCTC...AGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp ATTCAGGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACGAGGGAGGTAAGTCTTaGGGGAAAGTTCTGGATGCC +
Preference number: 4 (lower is better)
Translates to: IQVCGDNVHCAHLYYPLNEGGKS*GKVLDA
Trigger: GGCATCCAGAACTTTCCCTCAAGACTTACCTCCCTC...GTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp TGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAACTAGAAAGCTGTTCTaGGAATTCCCTGGCCCACTG +
Preference number: 4 (lower is better)
Translates to: CGDNVHCAHLYYPLNRHETRKLF*EFPGPL
Trigger: CAGTGGGCCAGGGAATTCTCAGAACAGCTTTCTAGT...TTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
CDS-3UTR TCA 90 bp TCTATCAAGGTGGGAATAAAACCAACCACAGGTCCCTCTTACCACAGAGTGGGTTGGACAATTCTCCACTaGCTGCAAAGCATTCCACTC +
Preference number: 4 (lower is better)
Translates to: SIKVGIKPTTGPSYHRVGWTILH*LQSIPL
Trigger: GAGTGGAATGCTTTGCAGTCAGTGGAGAATTGTCCA...ACCCACTCTGTGGTAAGAGGGACCTGTGGTTGGTTTTATTCCCACCTTGATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574003.1
ENST00000575112.5
CDS-3UTR TCA 90 bp GGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCATTCAACCCCATAGAATaGTGTGAGTCCAAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GVWGQCALCSFILPSKQAFNPIE*CESKLA
Trigger: AGCCAGCTTGGACTCACATCATTCTATGGGGTTGAA...TGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp AGTGGGTCCCAGGAGACGCTTACCAGACAGCTCATGAGAAGACTGGACTTTTCTTTACCAGACAGCTCATaGGAAGACTGGACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SGSQETLTRQLMRRLDFSLPDSS*EDWTFL
Trigger: AAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGTAA...AGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGTAAGCGTCTCCTGGGACCCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574003.1
ENST00000575112.5
CDS-3UTR TCA 90 bp CTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGGCCTATTATGAAATGACCAGCTaGATCCAAAACCACTACTAC +
Preference number: 4 (lower is better)
Translates to: LLCFCPVSFRKSGASMAYYEMTS*IQNHYY
Trigger: GTAGTAGTGGTTTTGGATTCAGCTGGTCATTTCATA...ATAGGCCATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS-3UTR GCA 90 bp CAAGTATCACAGGCCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTCCTAGGGAAAGTTCTGGATaGCTGGGTTTACCCAGATGG +
Preference number: 4 (lower is better)
Translates to: QVSQARQLMRRLDFSSVPRESSG*LGLPRW
Trigger: CCATCTGGGTAAACCCAGGCATCCAGAACTTTCCCT...AGGAACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGCCTGTGATACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR GCA 90 bp TGTCAACTCAGAAGAATGAGATGGGATGGACAGGCCACACTGACACACCACCACCAATTCTCCACTGACTaGAAAGCATTCCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: CQLRRMRWDGQATLTHHHQFSTD*KAFHSS
Trigger: AGAAGAGTGGAATGCTTTGCAGTCAGTGGAGAATTG...GTGGTGGTGTGTCAGTGTGGCCTGTCCATCCCATCTCATTCTTCTGAGTTGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571558.5
ENST00000575112.5
CDS-3UTR GCA 90 bp GCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTCTGTCCAGGCACGAAGCTTCTaGTCTGTCAACTCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: ALCSFILPSKQARSFCSVQARSF*SVNSEE
Trigger: TTCTTCTGAGTTGACAGAGCAGAAGCTTCGTGCCTG...GACAGAGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571558.5
ENST00000575112.5
CDS-3UTR GCA 90 bp ATTCAGGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACGCCCTGCTATGCTTCTaGCCTGTTTCCTTCCGCAAA +
Preference number: 4 (lower is better)
Translates to: IQVCGDNVHCAHLYYPLNALLCF*PVSFRK
Trigger: TTTGCGGAAGGAAACAGGGCAGAAGCATAGCAGGGC...GTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR GCA 90 bp GTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGACAGGCACGAAGCTTCTaGTCTGTCAACTCAGAAGAT +
Preference number: 4 (lower is better)
Translates to: VWGQCALCSFILPSKQARQARSF*SVNSED
Trigger: ATCTTCTGAGTTGACAGAGCAGAAGCTTCGTGCCTG...TCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539417.6
CDS-3UTR CCA 90 bp GCCCAAGTATCACAGGCCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTCTGGGTTTACCCAGATaGAGGTGTCCAATAGGCAAT +
Preference number: 4 (lower is better)
Translates to: AQVSQARQLMRRLDFSSVLGLPR*RCPIGN
Trigger: ATTGCCTATTGGACACCTCCATCTGGGTAAACCCAG...AACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGCCTGTGATACTTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CCA 90 bp CTCATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTGACTGAAAATTCAGGTGTTCTGAGAATTCCCTaGCCCACTGCTTCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: LMRRLDFSSVPPVTENSGVLRIP*PTASSL
Trigger: CAGGCTGGAAGCAGTGGGCCAGGGAATTCTCAGAAC...ACCTGAATTTTCAGTCACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
CDS-3UTR CCA 90 bp TCTATCAAGGTGGGAATAAAACCAACCACAGGTCCCTCTTACCACAGAGTGGGTAAGAATGAGATGGGATaGACAGGCCACACTGACACA +
Preference number: 4 (lower is better)
Translates to: SIKVGIKPTTGPSYHRVGKNEMG*TGHTDT
Trigger: TGTGTCAGTGTGGCCTGTCCATCCCATCTCATTCTT...ACCCACTCTGTGGTAAGAGGGACCTGTGGTTGGTTTTATTCCCACCTTGATAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR CCA 90 bp GTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAAATTCAGGTGTGTaGGGACAATGTGCACTGTGC +
Preference number: 4 (lower is better)
Translates to: VCGDNVHCAHLYYPLNRHENSGV*GQCALC
Trigger: GCACAGTGCACATTGTCCCCACACACCTGAATTTTC...GTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
CDS-3UTR CCA 90 bp ATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTGACTGAAAATTCAGGTGTGCTCGTCCCGCCCCCTTaGGCTTCAGAAATAATGGTG +
Preference number: 4 (lower is better)
Translates to: MRRLDFSSVPPVTENSGVLVPPP*ASEIMV
Trigger: CACCATTATTTCTGAAGCCCAAGGGGGCGGGACGAG...CACACCTGAATTTTCAGTCACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CCA 90 bp GGAGACGCTTACCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAAGGCTCCCCCTGCCTaGGATCTAAAAGCAATAATA +
Preference number: 4 (lower is better)
Translates to: GDAYQTAHEKTGLFFCSSKAPPA*DLKAII
Trigger: TATTATTGCTTTTAGATCCCAGGCAGGGGGAGCCTT...GGAGGAACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGTAAGCGTCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR TCA 90 bp TGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTCTTGGACAATTCTCCACTaGCTGCAAAGCATTCCACTC +
Preference number: 4 (lower is better)
Translates to: CALCSFILPSKQARSFCSWTILH*LQSIPL
Trigger: GAGTGGAATGCTTTGCAGTCAGTGGAGAATTGTCCA...AGAGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
CDS-3UTR TCA 90 bp CAAGTATCACAGGCCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTCCTTGGACAATTCTCCACTaGCTGCAAAGCATTCCACTC +
Preference number: 4 (lower is better)
Translates to: QVSQARQLMRRLDFSSVPWTILH*LQSIPL
Trigger: GAGTGGAATGCTTTGCAGTCAGTGGAGAATTGTCCA...AGGAACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGCCTGTGATACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp ATTCAGGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACTTGATCAGCTCCTGTTaGATTTCCTCCAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: IQVCGDNVHCAHLYYPLNLISSC*ISSSTA
Trigger: GGCTGTGCTGGAGGAAATTCAACAGGAGCTGATCAA...GTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
CDS-3UTR TCA 90 bp GGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCATGGACTGCTCTTGGTTaGTCAGCTCCTGTTGAATTT +
Preference number: 4 (lower is better)
Translates to: GVWGQCALCSFILPSKQAWTALG*SAPVEF
Trigger: AAATTCAACAGGAGCTGATCAACCAAGAGCAGTCCA...TGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539417.6
CDS-3UTR TCA 90 bp GAAAATTCAGGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTCCCCATAGAATGATGTaGGTCCAAGCTGGCTCTAGA +
Preference number: 4 (lower is better)
Translates to: ENSGVWGQCALCSFILPSPHRMM*VQAGSR
Trigger: TCTAGAGCCAGCTTGGACTCACATCATTCTATGGGG...AGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp ATTCAGGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACCCCCATAGAATGATGTaGGTCCAAGCTGGCTCTAGA +
Preference number: 4 (lower is better)
Translates to: IQVCGDNVHCAHLYYPLNPHRMM*VQAGSR
Trigger: TCTAGAGCCAGCTTGGACTCACATCATTCTATGGGG...GTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp CAAGTATCACAGGCCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTCCTTTCAACCCCATAGAATaGTGTGAGTCCAAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: QVSQARQLMRRLDFSSVPFNPIE*CESKLA
Trigger: AGCCAGCTTGGACTCACATCATTCTATGGGGTTGAA...AGGAACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGCCTGTGATACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp GTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACCTTCTGTTCCTCCAGTaGCTGAAAATTCAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: VCGDNVHCAHLYYPLNRHLLFLQ*LKIQVC
Trigger: ACACACCTGAATTTTCAGTCACTGGAGGAACAGAAG...GTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
CDS-3UTR TCA 90 bp AGTATCACAGGCCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTCCTCCCTTCTGTTCCTCCAGTaGCTGAAAATTCAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: SITGQTAHEKTGLFFCSSLLFLQ*LKIQVC
Trigger: ACACACCTGAATTTTCAGTCACTGGAGGAACAGAAG...GGAGGAACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGCCTGTGATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp TCTACCCCCACAACTCACCAGATCTCCATGTCTGTCCAGATCGATTCCATGCTTCAAAACCACTACTACTaGTCAAAGAAGAGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: STPTTHQISMSVQIDSMLQNHYY*SKKSRC
Trigger: ACACCTGCTCTTCTTTGATCAGTAGTAGTGGTTTTG...AAGCATGGAATCGATCTGGACAGACATGGAGATCTGGTGAGTTGTGGGGGTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR TCA 90 bp ACAGGCCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTGACCTCAGAAGACTTGGTTaGTCAGCTCCTGTTGAATTT +
Preference number: 4 (lower is better)
Translates to: TGQTAHEKTGLFFCSSSDLRRLG*SAPVEF
Trigger: AAATTCAACAGGAGCTGATCAACCAAGTCTTCTGAG...GTCACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575599.5
CDS-3UTR TCA 90 bp ATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTGACTGAAAATTCAGGTGTGCCACCACACCGCTTGTaGTTCTCAGGTTGTACCTTG +
Preference number: 4 (lower is better)
Translates to: MRRLDFSSVPPVTENSGVPPHRL*FSGCTL
Trigger: CAAGGTACAACCTGAGAATCACAAGCGGTGTGGTGG...CACACCTGAATTTTCAGTCACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571558.5
ENST00000575112.5
CDS-3UTR GCA 90 bp GAAAATTCAGGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAGGGAAAGTTCTGGATaGCTGGGTTTACCCAGATGG +
Preference number: 4 (lower is better)
Translates to: ENSGVWGQCALCSFILPSRESSG*LGLPRW
Trigger: CCATCTGGGTAAACCCAGGCATCCAGAACTTTCCCT...AGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR GCA 90 bp ATAAAACCAACCACAGGTCCCTCTTACCACAGAGTGGGTCCCAGGAGACGCTTATGTAGACTCCAGCTCTaGTACCATTATAATCTGTGT +
Preference number: 4 (lower is better)
Translates to: IKPTTGPSYHRVGPRRRLCRLQL*YHYNLC
Trigger: ACACAGATTATAATGGTAGCAGAGCTGGAGTCTACA...TAAGCGTCTCCTGGGACCCACTCTGTGGTAAGAGGGACCTGTGGTTGGTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR CCA 90 bp TGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAAAGAATGAGATGGGATaGACAGGCCACACTGACACA +
Preference number: 4 (lower is better)
Translates to: CGDNVHCAHLYYPLNRHEKNEMG*TGHTDT
Trigger: TGTGTCAGTGTGGCCTGTCCATCCCATCTCATTCTT...TTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571558.5
ENST00000575112.5
CDS-3UTR TCA 90 bp AATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTTGGACAATTCTCCACTaGCTGCAAAGCATTCCACTC +
Preference number: 4 (lower is better)
Translates to: NVHCAHLYYPLNRHEASAWTILH*LQSIPL
Trigger: GAGTGGAATGCTTTGCAGTCAGTGGAGAATTGTCCA...AGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
CDS-3UTR TCA 90 bp CTCATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTGACTGAAAATTCAGGTTTGATCAGCTCCTGTTaGATTTCCTCCAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: LMRRLDFSSVPPVTENSGLISSC*ISSSTA
Trigger: GGCTGTGCTGGAGGAAATTCAACAGGAGCTGATCAA...ACCTGAATTTTCAGTCACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
CDS-3UTR TCA 90 bp ATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTGACTGAAAATTCAGGTGTGTTGATCAGCTCCTGTTaGATTTCCTCCAGCACAGCC +
Preference number: 4 (lower is better)
Translates to: MRRLDFSSVPPVTENSGVLISSC*ISSSTA
Trigger: GGCTGTGCTGGAGGAAATTCAACAGGAGCTGATCAA...CACACCTGAATTTTCAGTCACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
CDS-3UTR TCA 90 bp ATTCAGGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACTTCAACCCCATAGAATaGTGTGAGTCCAAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: IQVCGDNVHCAHLYYPLNFNPIE*CESKLA
Trigger: AGCCAGCTTGGACTCACATCATTCTATGGGGTTGAA...GTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR TCA 90 bp GCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTCTGTCAGGTTGTACCTTGGTTaGTCAGCTCCTGTTGAATTT +
Preference number: 4 (lower is better)
Translates to: ALCSFILPSKQARSFCSVRLYLG*SAPVEF
Trigger: AAATTCAACAGGAGCTGATCAACCAAGGTACAACCT...GACAGAGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571558.5
ENST00000575112.5
CDS-3UTR GCA 90 bp GGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACAATTCTCCACTGACTaGAAAGCATTCCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: GVWGQCALCSFILPSKQAQFSTD*KAFHSS
Trigger: AGAAGAGTGGAATGCTTTGCAGTCAGTGGAGAATTG...TGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
CDS-3UTR GCA 90 bp GCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTCTGTCCAATTCTCCACTGACTaGAAAGCATTCCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: ALCSFILPSKQARSFCSVQFSTD*KAFHSS
Trigger: AGAAGAGTGGAATGCTTTGCAGTCAGTGGAGAATTG...GACAGAGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
CDS-3UTR GCA 90 bp AGTATCACAGGCCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTCCTCCCAATTCTCCACTGACTaGAAAGCATTCCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: SITGQTAHEKTGLFFCSSQFSTD*KAFHSS
Trigger: AGAAGAGTGGAATGCTTTGCAGTCAGTGGAGAATTG...GGAGGAACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGCCTGTGATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR GCA 90 bp ATTCAGGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACCAGGCACGAAGCTTCTaGTCTGTCAACTCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: IQVCGDNVHCAHLYYPLNQARSF*SVNSEE
Trigger: TTCTTCTGAGTTGACAGAGCAGAAGCTTCGTGCCTG...GTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000571558.5
ENST00000575112.5
CDS-3UTR GCA 90 bp GCCCAAGTATCACAGGCCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTGGACAATGTGCACTGTaGTCATTTATACTACCCTCT +
Preference number: 4 (lower is better)
Translates to: AQVSQARQLMRRLDFSSVGQCAL*SFILPS
Trigger: AGAGGGTAGTATAAATGAGCACAGTGCACATTGTCC...AACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGCCTGTGATACTTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR GCA 90 bp CTCATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTGACTGAAAATTCAGGTAATGCTGCCCTGCTATaGTTCTGCCCTGTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: LMRRLDFSSVPPVTENSGNAALL*FCPVSF
Trigger: GAAGGAAACAGGGCAGAAGCATAGCAGGGCAGCATT...ACCTGAATTTTCAGTCACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR CCA 90 bp AATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTCTGGGTTTACCCAGATaGAGGTGTCCAATAGGCAAT +
Preference number: 4 (lower is better)
Translates to: NVHCAHLYYPLNRHEASALGLPR*RCPIGN
Trigger: ATTGCCTATTGGACACCTCCATCTGGGTAAACCCAG...AGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CCA 90 bp GTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGATCGCAGCGTATTCTaGGAAGTGTTGTTTTATCGA +
Preference number: 4 (lower is better)
Translates to: VCGDNVHCAHLYYPLNRHDRSVF*EVLFYR
Trigger: TCGATAAAACAACACTTCCCAGAATACGCTGCGATC...GTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CCA 90 bp GCCCAAGTATCACAGGCCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTGATCGCAGCGTATTCTaGGAAGTGTTGTTTTATCGA +
Preference number: 4 (lower is better)
Translates to: AQVSQARQLMRRLDFSSVDRSVF*EVLFYR
Trigger: TCGATAAAACAACACTTCCCAGAATACGCTGCGATC...AACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGCCTGTGATACTTGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CCA 90 bp GGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCAGATCGCAGCGTATTCTaGGAAGTGTTGTTTTATCGA +
Preference number: 4 (lower is better)
Translates to: GVWGQCALCSFILPSKQADRSVF*EVLFYR
Trigger: TCGATAAAACAACACTTCCCAGAATACGCTGCGATC...TGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CCA 90 bp AATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTGAAAATTCAGGTGTGTaGGGACAATGTGCACTGTGC +
Preference number: 4 (lower is better)
Translates to: NVHCAHLYYPLNRHEASAENSGV*GQCALC
Trigger: GCACAGTGCACATTGTCCCCACACACCTGAATTTTC...AGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
CDS-3UTR CCA 90 bp ACAGGAACTATCCTCTCCCTCATGAACCTAATGCTCCAGCTAAGTAGAACAAGAGAAAATTCAGGTGTGTaGGGACAATGTGCACTGTGC +
Preference number: 4 (lower is better)
Translates to: TGTILSLMNLMLQLSRTRENSGV*GQCALC
Trigger: GCACAGTGCACATTGTCCCCACACACCTGAATTTTC...TCTTGTTCTACTTAGCTGGAGCATTAGGTTCATGAGGGAGAGGATAGTTCCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR CCA 90 bp TGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTCTGTGAACCACAGTGCCTaGCTGTGTTTCTCATATTTG +
Preference number: 4 (lower is better)
Translates to: CALCSFILPSKQARSFCSVNHSA*LCFSYL
Trigger: CAAATATGAGAAACACAGCCAGGCACTGTGGTTCAC...AGAGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR TCA 90 bp GAAAATTCAGGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTCTTCTGTTCCTCCAGTaGCTGAAAATTCAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: ENSGVWGQCALCSFILPSLLFLQ*LKIQVC
Trigger: ACACACCTGAATTTTCAGTCACTGGAGGAACAGAAG...AGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
CDS-3UTR TCA 90 bp TGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAACTCAGAAGACTTGGTTaGTCAGCTCCTGTTGAATTT +
Preference number: 4 (lower is better)
Translates to: CGDNVHCAHLYYPLNRHELRRLG*SAPVEF
Trigger: AAATTCAACAGGAGCTGATCAACCAAGTCTTCTGAG...TTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574003.1
ENST00000575599.5
CDS-3UTR TCA 90 bp GTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGATATAATCTGTGTGGATaGCTCACTGTTCACCTTACT +
Preference number: 4 (lower is better)
Translates to: VWGQCALCSFILPSKQARYNLCG*LTVHLT
Trigger: AGTAAGGTGAACAGTGAGTCATCCACACAGATTATA...TCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR GCA 90 bp GGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCCAGATCGATTCCATaGTTCAAGGCCAAGTTAAAT +
Preference number: 4 (lower is better)
Translates to: GDNVHCAHLYYPLNRHEASRSIP*FKAKLN
Trigger: ATTTAACTTGGCCTTGAAGCATGGAATCGATCTGGA...AGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR CCA 90 bp CTCATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTGACTGAAAATTCAGGTGAAAATTCAGGTGTGTaGGGACAATGTGCACTGTGC +
Preference number: 4 (lower is better)
Translates to: LMRRLDFSSVPPVTENSGENSGV*GQCALC
Trigger: GCACAGTGCACATTGTCCCCACACACCTGAATTTTC...ACCTGAATTTTCAGTCACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
CDS-3UTR CCA 90 bp GTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGATTGATAAAGGTGAAATaGCTGTTACCAGGCAATGCT +
Preference number: 4 (lower is better)
Translates to: VWGQCALCSFILPSKQARLIKVK*LLPGNA
Trigger: AGCATTGCCTGGTAACAGCCATTTCACCTTTATCAA...TCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR TCA 90 bp TACCTGTTTATAGGTCATTATTTCTATCAAGGTGGGAATAAAACCAACCACAGGCCACCACACCGCTTGTaGTTCTCAGGTTGTACCTTG +
Preference number: 4 (lower is better)
Translates to: YLFIGHYFYQGGNKTNHRPPHRL*FSGCTL
Trigger: CAAGGTACAACCTGAGAATCACAAGCGGTGTGGTGG...CCTGTGGTTGGTTTTATTCCCACCTTGATAGAAATAATGACCTATAAACAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR TCA 90 bp ATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTGACTGAAAATTCAGGTGTGAAAGCACTGCATATTTaGGCATCTGCTACCAGTGCT +
Preference number: 4 (lower is better)
Translates to: MRRLDFSSVPPVTENSGVKALHI*ASATSA
Trigger: AGCACTGGTAGCAGATGCTCAAATATGCAGTGCTTT...CACACCTGAATTTTCAGTCACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR GCA 90 bp ATTCAGGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACGGACAATGTGCACTGTaGTCATTTATACTACCCTCT +
Preference number: 4 (lower is better)
Translates to: IQVCGDNVHCAHLYYPLNGQCAL*SFILPS
Trigger: AGAGGGTAGTATAAATGAGCACAGTGCACATTGTCC...GTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
CDS-3UTR GCA 90 bp GAAAATTCAGGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTGGACAATGTGCACTGTaGTCATTTATACTACCCTCT +
Preference number: 4 (lower is better)
Translates to: ENSGVWGQCALCSFILPSGQCAL*SFILPS
Trigger: AGAGGGTAGTATAAATGAGCACAGTGCACATTGTCC...AGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
CDS-3UTR GCA 90 bp AATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTGGACAATGTGCACTGTaGTCATTTATACTACCCTCT +
Preference number: 4 (lower is better)
Translates to: NVHCAHLYYPLNRHEASAGQCAL*SFILPS
Trigger: AGAGGGTAGTATAAATGAGCACAGTGCACATTGTCC...AGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
CDS-3UTR TCA 90 bp ACAGGAACTATCCTCTCCCTCATGAACCTAATGCTCCAGCTAAGTAGAACAAGATATGAAATGACCAGCTaGATCCAAAACCACTACTAC +
Preference number: 4 (lower is better)
Translates to: TGTILSLMNLMLQLSRTRYEMTS*IQNHYY
Trigger: GTAGTAGTGGTTTTGGATTCAGCTGGTCATTTCATA...TCTTGTTCTACTTAGCTGGAGCATTAGGTTCATGAGGGAGAGGATAGTTCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR TCA 90 bp CTCATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTGACTGAAAATTCAGGTCACCAATTCTGTTTTTaGGACAGAATCTCACCCTGT +
Preference number: 4 (lower is better)
Translates to: LMRRLDFSSVPPVTENSGHQFCF*DRISPC
Trigger: ACAGGGTGAGATTCTGTCTCAAAAACAGAATTGGTG...ACCTGAATTTTCAGTCACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCATGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR TCA 90 bp GCCTGTTTATTCTGTTCTCTTATTACCAACCCAAGGCTTGAGCTCTGTGAGAGAAATTATATGCTGAGCTaGAGCTGTACACTTGGCAAT +
Preference number: 4 (lower is better)
Translates to: ACLFCSLITNPRLELCERNYMLS*SCTLGN
Trigger: ATTGCCAAGTGTACAGCTTCAGCTCAGCATATAATT...TCTCTCACAGAGCTCAAGCCTTGGGTTGGTAATAAGAGAACAGAATAAACAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR GCA 90 bp GACGCTTACCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTCTAAGTAGAACAAGATaGTCTTTGTATATACTCCAG +
Preference number: 4 (lower is better)
Translates to: DAYQTAHEKTGLFFCSSSLSRTR*SLYILQ
Trigger: CTGGAGTATATACAAAGAGCATCTTGTTCTACTTAG...ACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGTAAGCGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR CCA 90 bp ATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTGACTGAAAATTCAGGTGTGTCCCTTCTTTCTGACTaGCCTTTGAGTCTAAATGAC +
Preference number: 4 (lower is better)
Translates to: MRRLDFSSVPPVTENSGVSLLSD*PLSLND
Trigger: GTCATTTAGACTCAAAGGCCAGTCAGAAAGAAGGGA...CACACCTGAATTTTCAGTCACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR TCA 90 bp TACCTGTTTATAGGTCATTATTTCTATCAAGGTGGGAATAAAACCAACCACAGGCTTCTGTTCCTCCAGTaGCTGAAAATTCAGGTGTGT +
Preference number: 4 (lower is better)
Translates to: YLFIGHYFYQGGNKTNHRLLFLQ*LKIQVC
Trigger: ACACACCTGAATTTTCAGTCACTGGAGGAACAGAAG...CCTGTGGTTGGTTTTATTCCCACCTTGATAGAAATAATGACCTATAAACAGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574003.1
ENST00000575112.5
CDS-3UTR GCA 90 bp TACCTGTTTATAGGTCATTATTTCTATCAAGGTGGGAATAAAACCAACCACAGGCAATTCTCCACTGACTaGAAAGCATTCCACTCTTCT +
Preference number: 4 (lower is better)
Translates to: YLFIGHYFYQGGNKTNHRQFSTD*KAFHSS
Trigger: AGAAGAGTGGAATGCTTTGCAGTCAGTGGAGAATTG...CCTGTGGTTGGTTTTATTCCCACCTTGATAGAAATAATGACCTATAAACAGGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000574003.1
ENST00000575112.5
3UTR CAA 72 bp CCTGTTTATTCTGTTCTCTTATTACCAACCCAAGGCTaGAGCTCTGTGAGAGATGTGTATTTCTCAATGTTA +
Preference number: 4 (lower is better)
Translates to: PVYSVLLLPTQG*SSVRDVYFSML
Trigger: TAACATTGAGAAATACACATCTCTCACAGAGCTCAAGCCTTGGGTTGGTAATAAGAGAACAGAATAAACAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
3UTR CAA 72 bp CTAACACCAGCTCTATCGCTTATTAGTAGTAAAATTTaGGCCAGATTACATCACTTCTCTGAATCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: LTPALSLISSKI*ARLHHFSESVS
Trigger: GGAAACAGATTCAGAGAAGTGATGTAATCTGGCCAAAATTTTACTACTAATAAGCGATAGAGCTGGTGTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS TCA 90 bp CCTCTCGAGCTTCCGGGCCGTCTGCTCGGTGATTGGCCGAAACAGTaGGTGGACGGCCGCGGATTGGCTGTGCTCAGCGGCGGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: PLELPGRLLGDWPKQ*VDGRGLAVLSGGLS
Trigger: GCTCAGCCCGCCGCTGAGCACAGCCAATCCGCGGCCGTCCACTCACTGTTTCGGCCAATCACCGAGCAGACGGCCCGGAAGCTCGAGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000381208.9
ENST00000536255.6
ENST00000539417.6
ENST00000571043.5
ENST00000571558.5
ENST00000571613.5
ENST00000573577.5
ENST00000575599.5
CDS TCA 90 bp AACAGTGAGTGGACGGCCGCGGATTGGCTGTGCTCAGCGGCGGGCTaGGCAACTGGAGTGAGGGGAGCAGTTGGGCCAAGATGGCGGCCG +
Preference number: 5 (lower is better)
Translates to: NSEWTAADWLCSAAG*ATGVRGAVGPRWRP
Trigger: CGGCCGCCATCTTGGCCCAACTGCTCCCCTCACTCCAGTTGCTCAGCCCGCCGCTGAGCACAGCCAATCCGCGGCCGTCCACTCACTGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000381208.9
ENST00000536255.6
ENST00000539417.6
ENST00000571043.5
ENST00000571558.5
ENST00000571613.5
ENST00000573577.5
ENST00000575599.5
CDS TCA 90 bp CCCGACCTGGCACGAGCCTCTCGAGCTTCCGGGCCGTCTGCTCGGTaGTTGGCCGAAACAGTGAGTGGACGGCCGCGGATTGGCTGTGCT +
Preference number: 5 (lower is better)
Translates to: PDLARASRASGPSAR*LAETVSGRPRIGCA
Trigger: AGCACAGCCAATCCGCGGCCGTCCACTCACTGTTTCGGCCAATCACCGAGCAGACGGCCCGGAAGCTCGAGAGGCTCGTGCCAGGTCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000381208.9
ENST00000536255.6
ENST00000539417.6
ENST00000571043.5
ENST00000571558.5
ENST00000571613.5
ENST00000573577.5
ENST00000575599.5
CDS-3UTR CAA 90 bp TCACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACAGTGGACGGCCGCGGATaGGCTGTGCTCAGCGGCGGG +
Preference number: 5 (lower is better)
Translates to: SQPKYHRHEMGWTGHTDTVDGRG*AVLSGG
Trigger: CCCGCCGCTGAGCACAGCCAATCCGCGGCCGTCCAC...TGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR CAA 90 bp TGTCAACTCAGAAGAATGAGATGGGATGGACAGGCCACACTGACACACCACCACGTGGACGGCCGCGGATaGGCTGTGCTCAGCGGCGGG +
Preference number: 5 (lower is better)
Translates to: CQLRRMRWDGQATLTHHHVDGRG*AVLSGG
Trigger: CCCGCCGCTGAGCACAGCCAATCCGCGGCCGTCCAC...GTGGTGGTGTGTCAGTGTGGCCTGTCCATCCCATCTCATTCTTCTGAGTTGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571558.5
CDS-3UTR CAA 90 bp CTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGGCCTATGGCGAGCCCACCAGTTaGTACAGGGAGCGGCGCGGA +
Preference number: 5 (lower is better)
Translates to: LLCFCPVSFRKSGASMAYGEPTS*YRERRG
Trigger: TCCGCGCCGCTCCCTGTACAAACTGGTGGGCTCGCC...ATAGGCCATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS GCA 90 bp ATCGACCGGCCCCACGTGGAGACAGATTTAGGCATCCAAGCGAAATaGGTGAGGCCAGCCCGACCTGCACTGAGGGAGGTAAGTCTTGAG +
Preference number: 5 (lower is better)
Translates to: IDRPHVETDLGIQAK*VRPARPALREVSLE
Trigger: CTCAAGACTTACCTCCCTCAGTGCAGGTCGGGCTGGCCTCACGCATTTCGCTTGGATGCCTAAATCTGTCTCCACGTGGGGCCGGTCGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000327154.10
ENST00000381208.9
ENST00000536255.6
ENST00000539417.6
ENST00000571043.5
ENST00000571558.5
ENST00000571613.5
ENST00000573577.5
ENST00000575599.5
CDS-3UTR CAA 90 bp GGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTGTGGACGGCCGCGGATaGGCTGTGCTCAGCGGCGGG +
Preference number: 5 (lower is better)
Translates to: GDNVHCAHLYYPLNRHEAVDGRG*AVLSGG
Trigger: CCCGCCGCTGAGCACAGCCAATCCGCGGCCGTCCAC...AGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CAA 90 bp CAAGTATCACAGGCCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTCCTGTGGACGGCCGCGGATaGGCTGTGCTCAGCGGCGGG +
Preference number: 5 (lower is better)
Translates to: QVSQARQLMRRLDFSSVPVDGRG*AVLSGG
Trigger: CCCGCCGCTGAGCACAGCCAATCCGCGGCCGTCCAC...AGGAACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGCCTGTGATACTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS TCA 90 bp GAAATGCGTGAGGCCAGCCCGACCTGCACTGAGGGAGGTAAGTCTTaGGGGAAAGTTCTGGATGCCTGGGTTTACCCAGATGGAGGTGTC +
Preference number: 5 (lower is better)
Translates to: EMREASPTCTEGGKS*GKVLDAWVYPDGGV
Trigger: GACACCTCCATCTGGGTAAACCCAGGCATCCAGAACTTTCCCTCAAGACTTACCTCCCTCAGTGCAGGTCGGGCTGGCCTCACGCATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000327154.10
ENST00000381208.9
ENST00000536255.6
ENST00000539417.6
ENST00000571043.5
ENST00000571558.5
ENST00000571613.5
ENST00000573577.5
ENST00000575599.5
CDS-3UTR CAA 90 bp CACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACACGTGATTGGCTTTCCCTaGGTGACGCCCCTGCTTGGT +
Preference number: 5 (lower is better)
Translates to: HSPSITGMRWDGQATLTHVIGFP*VTPLLG
Trigger: ACCAAGCAGGGGCGTCACCAAGGGAAAGCCAATCAC...GTGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR CAA 90 bp CACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACACAGCACCACCATTATGTaGACTTCTCGTCCCGCCCCC +
Preference number: 5 (lower is better)
Translates to: HSPSITGMRWDGQATLTHSTTIM*TSRPAP
Trigger: GGGGGCGGGACGAGAAGTCAACATAATGGTGGTGCT...GTGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS GCA 90 bp TCACCTCTTGAACTAGAAAGCTGTTCTGAGAATTCCCTGGCCCACTaGTTCCAGCCTGGCGGTACCTGTTTAGGAGCCTGTCCCGGCTGT +
Preference number: 5 (lower is better)
Translates to: SPLELESCSENSLAH*FQPGGTCLGACPGC
Trigger: ACAGCCGGGACAGGCTCCTAAACAGGTACCGCCAGGCTGGAAGCAGTGGGCCAGGGAATTCTCAGAACAGCTTTCTAGTTCAAGAGGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000327154.10
ENST00000381208.9
ENST00000381209.8
ENST00000405578.8
ENST00000536255.6
ENST00000539417.6
ENST00000570883.5
ENST00000571043.5
ENST00000571558.5
ENST00000571613.5
ENST00000572174.5
ENST00000573126.1
ENST00000573577.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
ENST00000575711.1
CDS-3UTR CAA 90 bp CACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACACTCTCGTCCCGCCCCCTaGGGCTTCAGAAATAATGGT +
Preference number: 5 (lower is better)
Translates to: HSPSITGMRWDGQATLTHSRPAP*GFRNNG
Trigger: ACCATTATTTCTGAAGCCCAAGGGGGCGGGACGAGA...GTGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS CCA 90 bp GGTGTACTTTCCGGGTGCAGACCGCGAATGGATCGCAGCGTATTCTaGGAAGTGTTGTTTTATCGACCGGCCCCACGTGGAGACAGATTT +
Preference number: 5 (lower is better)
Translates to: GVLSGCRPRMDRSVF*EVLFYRPAPRGDRF
Trigger: AAATCTGTCTCCACGTGGGGCCGGTCGATAAAACAACACTTCCCAGAATACGCTGCGATCCATTCGCGGTCTGCACCCGGAAAGTACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000327154.10
ENST00000381208.9
ENST00000536255.6
ENST00000539417.6
ENST00000571043.5
ENST00000571558.5
ENST00000571613.5
ENST00000573577.5
ENST00000575599.5
CDS-3UTR CAA 90 bp TCCAAGCTGGCTCTAGAGGATCACAGCCCAAGTATCACAGGCCAGACAGCTCATTCTCGTCCCGCCCCCTaGGGCTTCAGAAATAATGGT +
Preference number: 5 (lower is better)
Translates to: SKLALEDHSPSITGQTAHSRPAP*GFRNNG
Trigger: ACCATTATTTCTGAAGCCCAAGGGGGCGGGACGAGA...ATGAGCTGTCTGGCCTGTGATACTTGGGCTGTGATCCTCTAGAGCCAGCTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CAA 90 bp CACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACACGTTGATCAGCTCCTGTaGAATTTCCTCCAGCACAGC +
Preference number: 5 (lower is better)
Translates to: HSPSITGMRWDGQATLTHVDQLL*NFLQHS
Trigger: GCTGTGCTGGAGGAAATTCAACAGGAGCTGATCAAC...GTGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR CAA 90 bp ACCAACCACAGGTCCCTCTTACCACAGAGTGGGTCCCAGGAGACGCTTACCAGATTCTCAGGTTGTACCTaGGTTGATCAGCTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: TNHRSLLPQSGSQETLTRFSGCT*VDQLLL
Trigger: CAACAGGAGCTGATCAACCAAGGTACAACCTGAGAA...TCTGGTAAGCGTCTCCTGGGACCCACTCTGTGGTAAGAGGGACCTGTGGTTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS TCA 90 bp AGGCTCTCCCCAGGTGCTAGATTTCCAGCAGCACCACCATTATGTTaGCTTCTCGTCCCGCCCCCTTGGGCTTCAGAAATAATGGTGATT +
Preference number: 5 (lower is better)
Translates to: RLSPGARFPAAPPLC*LLVPPPWASEIMVI
Trigger: AATCACCATTATTTCTGAAGCCCAAGGGGGCGGGACGAGAAGTCAACATAATGGTGGTGCTGCTGGAAATCTAGCACCTGGGGAGAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000381208.9
ENST00000536255.6
ENST00000539417.6
ENST00000571043.5
ENST00000571558.5
ENST00000571613.5
ENST00000573577.5
ENST00000575599.5
CDS-3UTR CAA 90 bp TCACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACAGTATTCTGGGAAGTGTaGTTTTATCGACCGGCCCCA +
Preference number: 5 (lower is better)
Translates to: SQPKYHRHEMGWTGHTDTVFWEV*FYRPAP
Trigger: TGGGGCCGGTCGATAAAACAACACTTCCCAGAATAC...TGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS-3UTR CAA 90 bp CTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGGCCTATGTTGATCAGCTCCTGTaGAATTTCCTCCAGCACAGC +
Preference number: 5 (lower is better)
Translates to: LLCFCPVSFRKSGASMAYVDQLL*NFLQHS
Trigger: GCTGTGCTGGAGGAAATTCAACAGGAGCTGATCAAC...ATAGGCCATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS-3UTR CAA 90 bp ACTGATCAAAGAAGAGCAGGTGTGGAGCCAGGCGTCCTAACTCCCAGACCAATCGATGATGGACTGCTCTaGGTTGATCAGCTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: TDQRRAGVEPGVLTPRPIDDGLL*VDQLLL
Trigger: CAACAGGAGCTGATCAACCAAGAGCAGTCCATCATC...GATTGGTCTGGGAGTTAGGACGCCTGGCTCCACACCTGCTCTTCTTTGATCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405578.8
CDS-3UTR CAA 90 bp TCCAAGCTGGCTCTAGAGGATCACAGCCCAAGTATCACAGGCCAGACAGCTCATGATGATGGACTGCTCTaGGTTGATCAGCTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: SKLALEDHSPSITGQTAHDDGLL*VDQLLL
Trigger: CAACAGGAGCTGATCAACCAAGAGCAGTCCATCATC...ATGAGCTGTCTGGCCTGTGATACTTGGGCTGTGATCCTCTAGAGCCAGCTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539417.6
CDS-3UTR CAA 90 bp GTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGTGATTGGCTTTCCCTaGGTGACGCCCCTGCTTGGT +
Preference number: 5 (lower is better)
Translates to: VCGDNVHCAHLYYPLNRHVIGFP*VTPLLG
Trigger: ACCAAGCAGGGGCGTCACCAAGGGAAAGCCAATCAC...GTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CAA 90 bp GGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCAGTGATTGGCTTTCCCTaGGTGACGCCCCTGCTTGGT +
Preference number: 5 (lower is better)
Translates to: GVWGQCALCSFILPSKQAVIGFP*VTPLLG
Trigger: ACCAAGCAGGGGCGTCACCAAGGGAAAGCCAATCAC...TGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CAA 90 bp GTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAGTGATTGGCTTTCCCTaGGTGACGCCCCTGCTTGGT +
Preference number: 5 (lower is better)
Translates to: VWGQCALCSFILPSKQARVIGFP*VTPLLG
Trigger: ACCAAGCAGGGGCGTCACCAAGGGAAAGCCAATCAC...TCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CAA 90 bp GCCCAAGTATCACAGGCCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTAGCACCACCATTATGTaGACTTCTCGTCCCGCCCCC +
Preference number: 5 (lower is better)
Translates to: AQVSQARQLMRRLDFSSVSTTIM*TSRPAP
Trigger: GGGGGCGGGACGAGAAGTCAACATAATGGTGGTGCT...AACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGCCTGTGATACTTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CAA 90 bp GGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCAAGCACCACCATTATGTaGACTTCTCGTCCCGCCCCC +
Preference number: 5 (lower is better)
Translates to: GVWGQCALCSFILPSKQASTTIM*TSRPAP
Trigger: GGGGGCGGGACGAGAAGTCAACATAATGGTGGTGCT...TGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS TCA 90 bp CTCTCCAGATTAACCAACGCCCTCTACTCCTGCTGTCAAACACACTaGTGGCCACTCATGGCAGGAAGAACGCTCAGAGATTGTAGGCTA +
Preference number: 5 (lower is better)
Translates to: LSRLTNALYSCCQTH*WPLMAGRTLRDCRL
Trigger: TAGCCTACAATCTCTGAGCGTTCTTCCTGCCATGAGTGGCCATCAGTGTGTTTGACAGCAGGAGTAGAGGGCGTTGGTTAATCTGGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573126.1
CDS CCA 90 bp CCACCAGACCTGGATCTCCAAACCTTGAATTTCAGGCAACAAATCTaGGGGGAGATTCCACTCACCTTGGAGTGGGGAATGGGAACGAAT +
Preference number: 5 (lower is better)
Translates to: PPDLDLQTLNFRQQI*GEIPLTLEWGMGTN
Trigger: ATTCGTTCCCATTCCCCACTCCAAGGTGAGTGGAATCTCCCCCCAGATTTGTTGCCTGAAATTCAAGGTTTGGAGATCCAGGTCTGGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000570883.5
ENST00000571043.5
ENST00000571613.5
ENST00000573126.1
CDS-3UTR CAA 90 bp GCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTCTGTCTCTCGTCCCGCCCCCTaGGGCTTCAGAAATAATGGT +
Preference number: 5 (lower is better)
Translates to: ALCSFILPSKQARSFCSVSRPAP*GFRNNG
Trigger: ACCATTATTTCTGAAGCCCAAGGGGGCGGGACGAGA...GACAGAGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CAA 90 bp TCACAGCCCAAGTATCACAGGCATGAGATGGGATGGACAGGCCACACTGACACATTCTCAGGTTGTACCTaGGTTGATCAGCTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: SQPKYHRHEMGWTGHTDTFSGCT*VDQLLL
Trigger: CAACAGGAGCTGATCAACCAAGGTACAACCTGAGAA...TGTGTCAGTGTGGCCTGTCCATCCCATCTCATGCCTGTGATACTTGGGCTGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573577.5
CDS GCA 90 bp GCCTCCCACTCAGCCAGCATGATGCTGAGACACTTTTCATCAAACTaGAAGCTCTTCTCATACTCGCTGATGATGGACTGCTCTTGGTTG +
Preference number: 5 (lower is better)
Translates to: ASHSASMMLRHFSSN*KLFSYSLMMDCSWL
Trigger: CAACCAAGAGCAGTCCATCATCAGCGAGTATGAGAAGAGCTTGCAGTTTGATGAAAAGTGTCTCAGCATCATGCTGGCTGAGTGGGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000327154.10
ENST00000381208.9
ENST00000381209.8
ENST00000405578.8
ENST00000539417.6
ENST00000570883.5
ENST00000571043.5
ENST00000571613.5
ENST00000573126.1
CDS CCA 90 bp ATGCCAACCAATATAACCGTGGCTCACTGTGATGGCTTGACTCCTTaGAGCCTTAAAGACACTCGGGCCCATGACTGTACCAAGATCTCT +
Preference number: 5 (lower is better)
Translates to: MPTNITVAHCDGLTP*SLKDTRAHDCTKIS
Trigger: AGAGATCTTGGTACAGTCATGGGCCCGAGTGTCTTTAAGGCTCCAAGGAGTCAAGCCATCACAGTGAGCCACGGTTATATTGGTTGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573126.1
CDS-3UTR CAA 90 bp CAAGTATCACAGGCCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTCCTTCTCGTCCCGCCCCCTaGGGCTTCAGAAATAATGGT +
Preference number: 5 (lower is better)
Translates to: QVSQARQLMRRLDFSSVPSRPAP*GFRNNG
Trigger: ACCATTATTTCTGAAGCCCAAGGGGGCGGGACGAGA...AGGAACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGCCTGTGATACTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CAA 90 bp GAAAATTCAGGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAGCACCACCATTATGTaGACTTCTCGTCCCGCCCCC +
Preference number: 5 (lower is better)
Translates to: ENSGVWGQCALCSFILPSSTTIM*TSRPAP
Trigger: GGGGGCGGGACGAGAAGTCAACATAATGGTGGTGCT...AGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAATTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CAA 90 bp CCAGGAGACGCTTACCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTCCCAGGGTTTCATCATATaGGCCAGGCTGGTCTTGAAC +
Preference number: 5 (lower is better)
Translates to: PGDAYQTAHEKTGLFFCSQGFII*ARLVLN
Trigger: GTTCAAGACCAGCCTGGCCAATATGATGAAACCCTG...GGAACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGTAAGCGTCTCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR CAA 90 bp TCTACCCCCACAACTCACCAGATCTCCATGTCTGTCCAGATCGATTCCATGCTTGCTGAAGCTGTACACTaGGCAATTAGGCCATCTTCC +
Preference number: 5 (lower is better)
Translates to: STPTTHQISMSVQIDSMLAEAVH*AIRPSS
Trigger: GGAAGATGGCCTAATTGCCAAGTGTACAGCTTCAGC...AAGCATGGAATCGATCTGGACAGACATGGAGATCTGGTGAGTTGTGGGGGTAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS GCA 90 bp GGGCCCATGACTGTACCAAGATCTCTTAACCCATCTCCATTTAACTaGCTCTCCAGATTAACCAACGCCCTCTACTCCTGCTGTCAAACA +
Preference number: 5 (lower is better)
Translates to: GPMTVPRSLNPSPFN*LSRLTNALYSCCQT
Trigger: TGTTTGACAGCAGGAGTAGAGGGCGTTGGTTAATCTGGAGAGGCAGTTAAATGGAGATGGGTTAAGAGATCTTGGTACAGTCATGGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573126.1
CDS-3UTR CAA 90 bp AGTATCACAGGCCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTCCTCCGTATTCTGGGAAGTGTaGTTTTATCGACCGGCCCCA +
Preference number: 5 (lower is better)
Translates to: SITGQTAHEKTGLFFCSSVFWEV*FYRPAP
Trigger: TGGGGCCGGTCGATAAAACAACACTTCCCAGAATAC...GGAGGAACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGCCTGTGATACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CAA 90 bp GGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCAGTTGATCAGCTCCTGTaGAATTTCCTCCAGCACAGC +
Preference number: 5 (lower is better)
Translates to: GVWGQCALCSFILPSKQAVDQLL*NFLQHS
Trigger: GCTGTGCTGGAGGAAATTCAACAGGAGCTGATCAAC...TGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
CDS-3UTR CAA 90 bp ATTCAGGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACCCCCCGACCAGCATTTaGTCTTTCACACTCAAGGGG +
Preference number: 5 (lower is better)
Translates to: IQVCGDNVHCAHLYYPLNPPTSI*SFTLKG
Trigger: CCCCTTGAGTGTGAAAGACAAAATGCTGGTCGGGGG...GTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAAT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS GCA 90 bp CCCAAGTATCACAGGCTTTGTACATACAGGACAGATGAGTGGGTTTaGCTCCCACTCAGCCAGCATGATGCTGAGACACTTTTCATCAAA +
Preference number: 5 (lower is better)
Translates to: PKYHRLCTYRTDEWV*LPLSQHDAETLFIK
Trigger: TTTGATGAAAAGTGTCTCAGCATCATGCTGGCTGAGTGGGAGGCAAACCCACTCATCTGTCCTGTATGTACAAAGCCTGTGATACTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327154.10
CDS CCA 90 bp GCTTGTGATTCTCAGGTTGTACTTTGTACATACAGGACAGATGAGTaGGTTTGCCTCCCACTCAGCCAGCATGATGCTGAGACACTTTTC +
Preference number: 5 (lower is better)
Translates to: ACDSQVVLCTYRTDE*VCLPLSQHDAETLF
Trigger: GAAAAGTGTCTCAGCATCATGCTGGCTGAGTGGGAGGCAAACCCACTCATCTGTCCTGTATGTACAAAGTACAACCTGAGAATCACAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381208.9
ENST00000381209.8
ENST00000405578.8
CDS CCA 90 bp TCTGCTCTGTCAACTCAGAAGATTTGTACATACAGGACAGATGAGTaGGTTTGCCTCCCACTCAGCCAGCATGATGCTGAGACACTTTTC +
Preference number: 5 (lower is better)
Translates to: SALSTQKICTYRTDE*VCLPLSQHDAETLF
Trigger: GAAAAGTGTCTCAGCATCATGCTGGCTGAGTGGGAGGCAAACCCACTCATCTGTCCTGTATGTACAAATCTTCTGAGTTGACAGAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539417.6
CDS-3UTR CAA 90 bp TGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGTTGATCAGCTCCTGTaGAATTTCCTCCAGCACAGC +
Preference number: 5 (lower is better)
Translates to: CGDNVHCAHLYYPLNRHEVDQLL*NFLQHS
Trigger: GCTGTGCTGGAGGAAATTCAACAGGAGCTGATCAAC...TTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
CDS-3UTR CAA 90 bp CTGCTATGCTTCTGCCCTGTTTCCTTCCGCAAAAGTGGTGCCAGCATGGCCTATCTTTCTGACTGGCCTTaGAGTCTAAATGACTTGTTA +
Preference number: 5 (lower is better)
Translates to: LLCFCPVSFRKSGASMAYLSDWP*SLNDLL
Trigger: TAACAAGTCATTTAGACTCAAAGGCCAGTCAGAAAG...ATAGGCCATGCTGGCACCACTTTTGCGGAAGGAAACAGGGCAGAAGCATAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405578.8
ENST00000575112.5
CDS-3UTR CAA 90 bp ACGCTTACCAGACAGCTCATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTGGTCAACTCAGAAGACTaGGTTGATCAGCTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: TLTRQLMRRLDFSSVPPVVNSED*VDQLLL
Trigger: CAACAGGAGCTGATCAACCAAGTCTTCTGAGTTGAC...CACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCATGAGCTGTCTGGTAAGCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574003.1
CDS-3UTR CAA 90 bp GGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTGAAAGCACTGCATATTaGAGCATCTGCTACCAGTGC +
Preference number: 5 (lower is better)
Translates to: GDNVHCAHLYYPLNRHEAESTAY*SICYQC
Trigger: GCACTGGTAGCAGATGCTCAAATATGCAGTGCTTTC...AGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR CAA 90 bp ATTCAGGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACGTATTCTGGGAAGTGTaGTTTTATCGACCGGCCCCA +
Preference number: 5 (lower is better)
Translates to: IQVCGDNVHCAHLYYPLNVFWEV*FYRPAP
Trigger: TGGGGCCGGTCGATAAAACAACACTTCCCAGAATAC...GTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CAA 90 bp AATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTGTATTCTGGGAAGTGTaGTTTTATCGACCGGCCCCA +
Preference number: 5 (lower is better)
Translates to: NVHCAHLYYPLNRHEASAVFWEV*FYRPAP
Trigger: TGGGGCCGGTCGATAAAACAACACTTCCCAGAATAC...AGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000575599.5
CDS-3UTR CAA 90 bp ATTCAGGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACGTTGATCAGCTCCTGTaGAATTTCCTCCAGCACAGC +
Preference number: 5 (lower is better)
Translates to: IQVCGDNVHCAHLYYPLNVDQLL*NFLQHS
Trigger: GCTGTGCTGGAGGAAATTCAACAGGAGCTGATCAAC...GTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACCTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000539417.6
ENST00000571558.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
CDS-3UTR CAA 90 bp TGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTCTGTCAACTCATCCTGCTTCTCTGCCTaGTTCTTCTATGTGGGGATC +
Preference number: 5 (lower is better)
Translates to: CSFILPSKQARSFCSVNSSCFSA*FFYVGI
Trigger: GATCCCCACATAGAAGAACAAGGCAGAGAAGCAGGA...TGAGTTGACAGAGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS TCA 90 bp CTGGAGGATCTTCAAGAAAGTAGATCCATGTGGGAAGAAGTATCATaGAATCTGTGTGTGGAACACTCACATGAGATGGGATGGACAGGC +
Preference number: 5 (lower is better)
Translates to: LEDLQESRSMWEEVS*NLCVEHSHEMGWTG
Trigger: GCCTGTCCATCCCATCTCATGTGAGTGTTCCACACACAGATTTCATGATACTTCTTCCCACATGGATCTACTTTCTTGAAGATCCTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573126.1
CDS GCA 90 bp GATTCTCAGGTTGTACTTTGTACATACAGGACAGATGAGTGGGTTTaGCTCCCACTCAGCCAGCATGATGCTGAGACACTTTTCATCAAA +
Preference number: 5 (lower is better)
Translates to: DSQVVLCTYRTDEWV*LPLSQHDAETLFIK
Trigger: TTTGATGAAAAGTGTCTCAGCATCATGCTGGCTGAGTGGGAGGCAAACCCACTCATCTGTCCTGTATGTACAAAGTACAACCTGAGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000381208.9
ENST00000381209.8
ENST00000405578.8
CDS GCA 90 bp CTGTCAACTCAGAAGATTTGTACATACAGGACAGATGAGTGGGTTTaGCTCCCACTCAGCCAGCATGATGCTGAGACACTTTTCATCAAA +
Preference number: 5 (lower is better)
Translates to: LSTQKICTYRTDEWV*LPLSQHDAETLFIK
Trigger: TTTGATGAAAAGTGTCTCAGCATCATGCTGGCTGAGTGGGAGGCAAACCCACTCATCTGTCCTGTATGTACAAATCTTCTGAGTTGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539417.6
CDS CCA 90 bp AAGAAAGTAGATCCATGTGGGAAGAAGTATCATGAAATCTGTGTGTaGAACACTCACATGAGATGGGATGGACAGGCCACACTGACACAC +
Preference number: 5 (lower is better)
Translates to: KKVDPCGKKYHEICV*NTHMRWDGQATLTH
Trigger: GTGTGTCAGTGTGGCCTGTCCATCCCATCTCATGTGAGTGTTCCACACACAGATTTCATGATACTTCTTCCCACATGGATCTACTTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573126.1
CDS-3UTR CAA 90 bp TGCTCATTTATACTACCCTCTAAACAGGCACGAAGCTTCTGCTCTGTCAACTCATTCTCAGGTTGTACCTaGGTTGATCAGCTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: CSFILPSKQARSFCSVNSFSGCT*VDQLLL
Trigger: CAACAGGAGCTGATCAACCAAGGTACAACCTGAGAA...TGAGTTGACAGAGCAGAAGCTTCGTGCCTGTTTAGAGGGTAGTATAAATGAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000571558.5
ENST00000575112.5
CDS-3UTR CAA 90 bp CTGCTCTGTCAACTCAGAAGAATGAGATGGGATGGACAGGCCACACTGACACACAGAACAAGATGCTCTTaGTATATACTCCAGTTTCCT +
Preference number: 5 (lower is better)
Translates to: LLCQLRRMRWDGQATLTHRTRCS*YILQFP
Trigger: AGGAAACTGGAGTATATACAAAGAGCATCTTGTTCT...GTGTGTCAGTGTGGCCTGTCCATCCCATCTCATTCTTCTGAGTTGACAGAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR CAA 90 bp GGTGTGTGGGGACAATGTGCACTGTGCTCATTTATACTACCCTCTAAACAGGCACTTTCTGACTGGCCTTaGAGTCTAAATGACTTGTTA +
Preference number: 5 (lower is better)
Translates to: GVWGQCALCSFILPSKQALSDWP*SLNDLL
Trigger: TAACAAGTCATTTAGACTCAAAGGCCAGTCAGAAAG...TGCCTGTTTAGAGGGTAGTATAAATGAGCACAGTGCACATTGTCCCCACACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS-3UTR CAA 90 bp CTCATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTGACTGAAAATTCAGGTGTCAACTCAGAAGACTaGGTTGATCAGCTCCTGTTG +
Preference number: 5 (lower is better)
Translates to: LMRRLDFSSVPPVTENSGVNSED*VDQLLL
Trigger: CAACAGGAGCTGATCAACCAAGTCTTCTGAGTTGAC...ACCTGAATTTTCAGTCACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000574003.1
ENST00000575599.5
CDS CCA 90 bp CATAAAACTGGGAAGAAATATGCACAATGGGCTCCAAGTCAGCACTaGAGGATCTTCAAGAAAGTAGATCCATGTGGGAAGAAGTATCAT +
Preference number: 5 (lower is better)
Translates to: HKTGKKYAQWAPSQH*RIFKKVDPCGKKYH
Trigger: ATGATACTTCTTCCCACATGGATCTACTTTCTTGAAGATCCTCCAGTGCTGACTTGGAGCCCATTGTGCATATTTCTTCCCAGTTTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573126.1
CDS TCA 90 bp TGTACTGTTTGCCAATTTTCATGCCATAGATATTCTCACCATGGCTaGTTTGAAGCTACCAATGTGACACCACTGAACATAAAACTGGGA +
Preference number: 5 (lower is better)
Translates to: CTVCQFSCHRYSHHG*FEATNVTPLNIKLG
Trigger: TCCCAGTTTTATGTTCAGTGGTGTCACATTGGTAGCTTCAAATCAGCCATGGTGAGAATATCTATGGCATGAAAATTGGCAAACAGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000573126.1
CDS-3UTR CAA 90 bp CTCATGAGAAGACTGGACTTTTCTTCTGTTCCTCCAGTGACTGAAAATTCAGGTTCCACCTTAACTCATTaGTACAAACATCTTAAGCAC +
Preference number: 5 (lower is better)
Translates to: LMRRLDFSSVPPVTENSGSTLTH*YKHLKH
Trigger: GTGCTTAAGATGTTTGTACAAATGAGTTAAGGTGGA...ACCTGAATTTTCAGTCACTGGAGGAACAGAAGAAAAGTCCAGTCTTCTCATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575112.5
CDS CCA 72 bp CGGGCCGTCTGCTCGGTGATTGGCCGAAACAGTGAGTaGACGGCCGCGGATTGGCTGTGCTCAGCGGCGGGC +
Preference number: 6 (lower is better)
Translates to: RAVCSVIGRNSE*TAADWLCSAAG
Trigger: GCCCGCCGCTGAGCACAGCCAATCCGCGGCCGTCCACTCACTGTTTCGGCCAATCACCGAGCAGACGGCCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000381208.9
ENST00000536255.6
ENST00000539417.6
ENST00000571043.5
ENST00000571558.5
ENST00000571613.5
ENST00000573577.5
ENST00000575599.5
CDS CCA 72 bp CGCGGATTGGCTGTGCTCAGCGGCGGGCTGAGCAACTaGAGTGAGGGGAGCAGTTGGGCCAAGATGGCGGCC +
Preference number: 6 (lower is better)
Translates to: RGLAVLSGGLSN*SEGSSWAKMAA
Trigger: GGCCGCCATCTTGGCCCAACTGCTCCCCTCACTCCAGTTGCTCAGCCCGCCGCTGAGCACAGCCAATCCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000381208.9
ENST00000536255.6
ENST00000539417.6
ENST00000571043.5
ENST00000571558.5
ENST00000571613.5
ENST00000573577.5
ENST00000575599.5
CDS TCA 72 bp CTTCCGGGCCGTCTGCTCGGTGATTGGCCGAAACAGTaGGTGGACGGCCGCGGATTGGCTGTGCTCAGCGGC +
Preference number: 6 (lower is better)
Translates to: LPGRLLGDWPKQ*VDGRGLAVLSG
Trigger: GCCGCTGAGCACAGCCAATCCGCGGCCGTCCACTCACTGTTTCGGCCAATCACCGAGCAGACGGCCCGGAAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000381208.9
ENST00000536255.6
ENST00000539417.6
ENST00000571043.5
ENST00000571558.5
ENST00000571613.5
ENST00000573577.5
ENST00000575599.5
CDS GCA 72 bp CGACCTGGCACGAGCCTCTCGAGCTTCCGGGCCGTCTaGTCGGTGATTGGCCGAAACAGTGAGTGGACGGCC +
Preference number: 6 (lower is better)
Translates to: RPGTSLSSFRAV*SVIGRNSEWTA
Trigger: GGCCGTCCACTCACTGTTTCGGCCAATCACCGAGCAGACGGCCCGGAAGCTCGAGAGGCTCGTGCCAGGTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000381208.9
ENST00000536255.6
ENST00000539417.6
ENST00000571043.5
ENST00000571558.5
ENST00000571613.5
ENST00000573577.5
ENST00000575599.5
CDS TCA 72 bp GCACGAGCCTCTCGAGCTTCCGGGCCGTCTGCTCGGTaGTTGGCCGAAACAGTGAGTGGACGGCCGCGGATT +
Preference number: 6 (lower is better)
Translates to: ARASRASGPSAR*LAETVSGRPRI
Trigger: AATCCGCGGCCGTCCACTCACTGTTTCGGCCAATCACCGAGCAGACGGCCCGGAAGCTCGAGAGGCTCGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000381208.9
ENST00000536255.6
ENST00000539417.6
ENST00000571043.5
ENST00000571558.5
ENST00000571613.5
ENST00000573577.5
ENST00000575599.5
CDS CAA 72 bp CGGAAAGCCTCTTTCCAAGGCGGCGAGCCCACCAGTTaGTACAGGGAGCGGCGCGGAGACCTCAACGACTCC +
Preference number: 6 (lower is better)
Translates to: RKASFQGGEPTS*YRERRGDLNDS
Trigger: GGAGTCGTTGAGGTCTCCGCGCCGCTCCCTGTACAAACTGGTGGGCTCGCCGCCTTGGAAAGAGGCTTTCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000327154.10
ENST00000381208.9
ENST00000381209.8
ENST00000405578.8
ENST00000536255.6
ENST00000539417.6
ENST00000570883.5
ENST00000571043.5
ENST00000571558.5
ENST00000571613.5
ENST00000572174.5
ENST00000573126.1
ENST00000573577.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
ENST00000575711.1
CDS CAA 90 bp CATCTCTGCCGGAAAGCCTCTTTCCAAGGCGGCGAGCCCACCAGTTaGTACAGGGAGCGGCGCGGAGACCTCAACGACTCCGCCATCTCC +
Preference number: 6 (lower is better)
Translates to: HLCRKASFQGGEPTS*YRERRGDLNDSAIS
Trigger: GGAGATGGCGGAGTCGTTGAGGTCTCCGCGCCGCTCCCTGTACAAACTGGTGGGCTCGCCGCCTTGGAAAGAGGCTTTCCGGCAGAGATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000327154.10
ENST00000381208.9
ENST00000381209.8
ENST00000405578.8
ENST00000536255.6
ENST00000539417.6
ENST00000570883.5
ENST00000571043.5
ENST00000571558.5
ENST00000571613.5
ENST00000572174.5
ENST00000573126.1
ENST00000573577.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
ENST00000575711.1
CDS GCA 72 bp CCCCACGTGGAGACAGATTTAGGCATCCAAGCGAAATaGGTGAGGCCAGCCCGACCTGCACTGAGGGAGGTA +
Preference number: 6 (lower is better)
Translates to: PHVETDLGIQAK*VRPARPALREV
Trigger: TACCTCCCTCAGTGCAGGTCGGGCTGGCCTCACGCATTTCGCTTGGATGCCTAAATCTGTCTCCACGTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000327154.10
ENST00000381208.9
ENST00000536255.6
ENST00000539417.6
ENST00000571043.5
ENST00000571558.5
ENST00000571613.5
ENST00000573577.5
ENST00000575599.5
CDS CCA 72 bp TCCGGGTGCAGACCGCGAATGGATCGCAGCGTATTCTaGGAAGTGTTGTTTTATCGACCGGCCCCACGTGGA +
Preference number: 6 (lower is better)
Translates to: SGCRPRMDRSVF*EVLFYRPAPRG
Trigger: TCCACGTGGGGCCGGTCGATAAAACAACACTTCCCAGAATACGCTGCGATCCATTCGCGGTCTGCACCCGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000327154.10
ENST00000381208.9
ENST00000536255.6
ENST00000539417.6
ENST00000571043.5
ENST00000571558.5
ENST00000571613.5
ENST00000573577.5
ENST00000575599.5
CDS CAA 72 bp CCTTGGGCTTCAGAAATAATGGTGATTGGCTTTCCCTaGGTGACGCCCCTGCTTGGTGGGCTGGCCTCGCCT +
Preference number: 6 (lower is better)
Translates to: PWASEIMVIGFP*VTPLLGGLASP
Trigger: AGGCGAGGCCAGCCCACCAAGCAGGGGCGTCACCAAGGGAAAGCCAATCACCATTATTTCTGAAGCCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000381208.9
ENST00000536255.6
ENST00000539417.6
ENST00000571043.5
ENST00000571558.5
ENST00000571613.5
ENST00000573577.5
ENST00000575599.5
CDS TCA 72 bp GAGGCCAGCCCGACCTGCACTGAGGGAGGTAAGTCTTaGGGGAAAGTTCTGGATGCCTGGGTTTACCCAGAT +
Preference number: 6 (lower is better)
Translates to: EASPTCTEGGKS*GKVLDAWVYPD
Trigger: ATCTGGGTAAACCCAGGCATCCAGAACTTTCCCTCAAGACTTACCTCCCTCAGTGCAGGTCGGGCTGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000327154.10
ENST00000381208.9
ENST00000536255.6
ENST00000539417.6
ENST00000571043.5
ENST00000571558.5
ENST00000571613.5
ENST00000573577.5
ENST00000575599.5
CDS TCA 72 bp TGGACAGGCCACACTGACACACCACCACACCGCTTGTaGTTCTCAGGTTGTACCTTGGTTGATCAGCTCCTG +
Preference number: 6 (lower is better)
Translates to: WTGHTDTPPHRL*FSGCTLVDQLL
Trigger: CAGGAGCTGATCAACCAAGGTACAACCTGAGAATCACAAGCGGTGTGGTGGTGTGTCAGTGTGGCCTGTCCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571558.5
ENST00000573577.5
ENST00000575112.5
CDS GCA 72 bp GAACTAGAAAGCTGTTCTGAGAATTCCCTGGCCCACTaGTTCCAGCCTGGCGGTACCTGTTTAGGAGCCTGT +
Preference number: 6 (lower is better)
Translates to: ELESCSENSLAH*FQPGGTCLGAC
Trigger: ACAGGCTCCTAAACAGGTACCGCCAGGCTGGAAGCAGTGGGCCAGGGAATTCTCAGAACAGCTTTCTAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000327154.10
ENST00000381208.9
ENST00000381209.8
ENST00000405578.8
ENST00000536255.6
ENST00000539417.6
ENST00000570883.5
ENST00000571043.5
ENST00000571558.5
ENST00000571613.5
ENST00000572174.5
ENST00000573126.1
ENST00000573577.5
ENST00000574003.1
ENST00000575112.5
ENST00000575599.5
ENST00000575711.1
CDS CCA 72 bp CCCTGGGAGGTGTACTTTCCGGGTGCAGACCGCGAATaGATCGCAGCGTATTCTGGGAAGTGTTGTTTTATC +
Preference number: 6 (lower is better)
Translates to: PWEVYFPGADRE*IAAYSGKCCFI
Trigger: GATAAAACAACACTTCCCAGAATACGCTGCGATCCATTCGCGGTCTGCACCCGGAAAGTACACCTCCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000327154.10
ENST00000381208.9
ENST00000536255.6
ENST00000539417.6
ENST00000571043.5
ENST00000571558.5
ENST00000571613.5
ENST00000573577.5
ENST00000575599.5
CDS TCA 72 bp CCAGGTGCTAGATTTCCAGCAGCACCACCATTATGTTaGCTTCTCGTCCCGCCCCCTTGGGCTTCAGAAATA +
Preference number: 6 (lower is better)
Translates to: PGARFPAAPPLC*LLVPPPWASEI
Trigger: TATTTCTGAAGCCCAAGGGGGCGGGACGAGAAGTCAACATAATGGTGGTGCTGCTGGAAATCTAGCACCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000381208.9
ENST00000536255.6
ENST00000539417.6
ENST00000571043.5
ENST00000571558.5
ENST00000571613.5
ENST00000573577.5
ENST00000575599.5
CDS CAA 90 bp ATTTCCAGCAGCACCACCATTATGTTGACTTCTCGTCCCGCCCCCTaGGGCTTCAGAAATAATGGTGATTGGCTTTCCCTTGGTGACGCC +
Preference number: 6 (lower is better)
Translates to: ISSSTTIMLTSRPAP*GFRNNGDWLSLGDA
Trigger: GGCGTCACCAAGGGAAAGCCAATCACCATTATTTCTGAAGCCCAAGGGGGCGGGACGAGAAGTCAACATAATGGTGGTGCTGCTGGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000381208.9
ENST00000536255.6
ENST00000539417.6
ENST00000571043.5
ENST00000571558.5
ENST00000571613.5
ENST00000573577.5
ENST00000575599.5
CDS CAA 90 bp AAGGAAGGACTACCACTAGGGGTTACCTTGGTTGATCAGCTCCTGTaGAATTTCCTCCAGCACAGCCATGTCTATCAGCTCCTCCAGCTG +
Preference number: 6 (lower is better)
Translates to: KEGLPLGVTLVDQLL*NFLQHSHVYQLLQL
Trigger: CAGCTGGAGGAGCTGATAGACATGGCTGTGCTGGAGGAAATTCAACAGGAGCTGATCAACCAAGGTAACCCCTAGTGGTAGTCCTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572174.5
CDS CAA 90 bp TCATTCCTCATGCCAACCAATATAACCGTGGCTCACTGTGATGGCTaGACTCCTTGGAGCCTTAAAGACACTCGGGCCCATGACTGTACC +
Preference number: 6 (lower is better)
Translates to: SFLMPTNITVAHCDG*TPWSLKDTRAHDCT
Trigger: GGTACAGTCATGGGCCCGAGTGTCTTTAAGGCTCCAAGGAGTCAAGCCATCACAGTGAGCCACGGTTATATTGGTTGGCATGAGGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573126.1
CDS TCA 72 bp TTAACCAACGCCCTCTACTCCTGCTGTCAAACACACTaGTGGCCACTCATGGCAGGAAGAACGCTCAGAGAT +
Preference number: 6 (lower is better)
Translates to: LTNALYSCCQTH*WPLMAGRTLRD
Trigger: ATCTCTGAGCGTTCTTCCTGCCATGAGTGGCCATCAGTGTGTTTGACAGCAGGAGTAGAGGGCGTTGGTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573126.1
CDS CAA 72 bp GCCCAAGTATCACAGGCCTTGGTTGATCAGCTCCTGTaGAATTTCCTCCAGCACAGCCATGTCTATCAGCTC +
Preference number: 6 (lower is better)
Translates to: AQVSQALVDQLL*NFLQHSHVYQL
Trigger: GAGCTGATAGACATGGCTGTGCTGGAGGAAATTCAACAGGAGCTGATCAACCAAGGCCTGTGATACTTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536255.6
CDS TCA 72 bp TGGACAGGCCACACTGACACACCACCACACCGCTTGTaGTTCTCAGGTTGTACTTTGTACATACAGGACAGA +
Preference number: 6 (lower is better)
Translates to: WTGHTDTPPHRL*FSGCTLYIQDR
Trigger: TCTGTCCTGTATGTACAAAGTACAACCTGAGAATCACAAGCGGTGTGGTGGTGTGTCAGTGTGGCCTGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000381208.9
ENST00000381209.8
ENST00000405578.8
CDS CCA 72 bp CTGGATCTCCAAACCTTGAATTTCAGGCAACAAATCTaGGGGGAGATTCCACTCACCTTGGAGTGGGGAATG +
Preference number: 6 (lower is better)
Translates to: LDLQTLNFRQQI*GEIPLTLEWGM
Trigger: CATTCCCCACTCCAAGGTGAGTGGAATCTCCCCCCAGATTTGTTGCCTGAAATTCAAGGTTTGGAGATCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000570883.5
ENST00000571043.5
ENST00000571613.5
ENST00000573126.1
CDS CAA 72 bp GCTGATGATGGACTGCTCTTGGTTGATCAGCTCCTGTaGAATTTCCTCCAGCACAGCCATGTCTATCAGCTC +
Preference number: 6 (lower is better)
Translates to: ADDGLLLVDQLL*NFLQHSHVYQL
Trigger: GAGCTGATAGACATGGCTGTGCTGGAGGAAATTCAACAGGAGCTGATCAACCAAGAGCAGTCCATCATCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000327154.10
ENST00000381208.9
ENST00000381209.8
ENST00000405578.8
ENST00000539417.6
ENST00000570883.5
ENST00000571043.5
ENST00000571613.5
ENST00000573126.1
CDS CAA 72 bp CTACCACTAGGGGTTACCTTGGTTGATCAGCTCCTGTaGAATTTCCTCCAGCACAGCCATGTCTATCAGCTC +
Preference number: 6 (lower is better)
Translates to: LPLGVTLVDQLL*NFLQHSHVYQL
Trigger: GAGCTGATAGACATGGCTGTGCTGGAGGAAATTCAACAGGAGCTGATCAACCAAGGTAACCCCTAGTGGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572174.5
CDS CCA 72 bp TCTACTCCTGCTGTCAAACACACTGATGGCCACTCATaGCAGGAAGAACGCTCAGAGATTGTAGGCTACTTT +
Preference number: 6 (lower is better)
Translates to: STPAVKHTDGHS*QEERSEIVGYF
Trigger: AAAGTAGCCTACAATCTCTGAGCGTTCTTCCTGCCATGAGTGGCCATCAGTGTGTTTGACAGCAGGAGTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573126.1
CDS GCA 72 bp ACTGTACCAAGATCTCTTAACCCATCTCCATTTAACTaGCTCTCCAGATTAACCAACGCCCTCTACTCCTGC +
Preference number: 6 (lower is better)
Translates to: TVPRSLNPSPFN*LSRLTNALYSC
Trigger: GCAGGAGTAGAGGGCGTTGGTTAATCTGGAGAGGCAGTTAAATGGAGATGGGTTAAGAGATCTTGGTACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573126.1
CDS CCA 72 bp GGGAAGAAATATGCACAATGGGCTCCAAGTCAGCACTaGAGGATCTTCAAGAAAGTAGATCCATGTGGGAAG +
Preference number: 6 (lower is better)
Translates to: GKKYAQWAPSQH*RIFKKVDPCGK
Trigger: CTTCCCACATGGATCTACTTTCTTGAAGATCCTCCAGTGCTGACTTGGAGCCCATTGTGCATATTTCTTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573126.1
CDS CAA 72 bp AATACAGGTAAGGAAGGACTACCACTAGGGGTTACCTaGGTTGATCAGCTCCTGTTGAATTTCCTCCAGCAC +
Preference number: 6 (lower is better)
Translates to: NTGKEGLPLGVT*VDQLLLNFLQH
Trigger: GTGCTGGAGGAAATTCAACAGGAGCTGATCAACCAAGGTAACCCCTAGTGGTAGTCCTTCCTTACCTGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000572174.5
CDS CCA 72 bp AATGATGATGTTGCAGTGATGAGCAGGTCTACGGTCTaGTATTTCAGACCATTTCATCTAGACAAGTCTAAC +
Preference number: 6 (lower is better)
Translates to: NDDVAVMSRSTV*YFRPFHLDKSN
Trigger: GTTAGACTTGTCTAGATGAAATGGTCTGAAATACCAGACCGTAGACCTGCTCATCACTGCAACATCATCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000575711.1
CDS TCA 72 bp TGCCAATTTTCATGCCATAGATATTCTCACCATGGCTaGTTTGAAGCTACCAATGTGACACCACTGAACATA +
Preference number: 6 (lower is better)
Translates to: CQFSCHRYSHHG*FEATNVTPLNI
Trigger: TATGTTCAGTGGTGTCACATTGGTAGCTTCAAATCAGCCATGGTGAGAATATCTATGGCATGAAAATTGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573126.1