Pregenerated sensors for RPA4 (Homo sapiens)
Ensembl gene IDs: ENSG00000204086Ensembl transcript IDs: ENST00000373040.4
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTAAATCCTACAGAGTTGTCAATTTATCCATCACCGTCTCTCTCTaGGCTTCAAATACAGAAAATCCGAAAAGTTCAAAGCAGTTAGAA | + |
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Preference number: 1 (lower is better) Translates to: SKSYRVVNLSITVSL*ASNTENPKSSKQLE Trigger: TTCTAACTGCTTTGAACTTTTCGGATTTTCTGTATTTGAAGCTCAGAGAGAGACGGTGATGGATAAATTGACAACTCTGTAGGATTTACT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| 3UTR CAA 90 bp | CCCGAAAATCATGTTTCCATTAGCTTGCTAGTAAATCCTACAGAGTaGTCAATTTATCCATCACCGTCTCTCTCTGAGCTTCAAATACAG | + |
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Preference number: 2 (lower is better) Translates to: PENHVSISLLVNPTE*SIYPSPSLSELQIQ Trigger: CTGTATTTGAAGCTCAGAGAGAGACGGTGATGGATAAATTGACAACTCTGTAGGATTTACTAGCAAGCTAATGGAAACATGATTTTCGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| 3UTR-3UTR GCA 90 bp | AAAAGTTCAAAGCAGTTAGAAAAGCAGCGAGTTGACAAAGAATGCCACTTGAGATTACTCACAGCTGGATaGAAGGGTCTTCGAAAAATG | + |
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Preference number: 2 (lower is better) Translates to: KSSKQLEKQRVDKECHLRLLTAG*KGLRKM Trigger: CATTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAA...TCTCAAGTGGCATTCTTTGTCAACTCGCTGCTTTTCTAACTGCTTTGAACTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| 3UTR-3UTR CCA 90 bp | AATCCGAAAAGTTCAAAGCAGTTAGAAAAGCAGCGAGTTGACAAAGAATGCCACAAAATTACTCACAGCTaGATGCAAGGGTCTTCGAAA | + |
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Preference number: 2 (lower is better) Translates to: NPKSSKQLEKQRVDKECHKITHS*MQGSSK Trigger: TTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTT...GTGGCATTCTTTGTCAACTCGCTGCTTTTCTAACTGCTTTGAACTTTTCGGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| 3UTR TCA 72 bp | TACAGAGTTGTCAATTTATCCATCACCGTCTCTCTCTaGGCTTCAAATACAGAAAATCCGAAAAGTTCAAAG | + |
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Preference number: 3 (lower is better) Translates to: YRVVNLSITVSL*ASNTENPKSSK Trigger: CTTTGAACTTTTCGGATTTTCTGTATTTGAAGCTCAGAGAGAGACGGTGATGGATAAATTGACAACTCTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR CCA 90 bp | GTCAAAATTACTCACAGCTGGATGCAAGGGTCTTCGAAAAATGAAAGGATGTTTGGGCTTTGGCTCGTCTaGGGCTCCACGGACGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: VKITHSWMQGSSKNERMFGLWLV*GSTDGF Trigger: AAAGCCGTCCGTGGAGCCCCAGACGAGCCAAAGCCC...AAACATCCTTTCATTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR CCA 90 bp | AAAAAGTCAACAGGTCAAAATTACTCACAGCTGGATGCAAGGGTCTTCGAAAAAGGAGAAGGTGGGCTTTaGCTCGTCTGGGGCTCCACG | + |
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Preference number: 4 (lower is better) Translates to: KKSTGQNYSQLDARVFEKGEGGL*LVWGST Trigger: CGTGGAGCCCCAGACGAGCCAAAGCCCACCTTCTCC...TTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTTGACCTGTTGACTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR TCA 90 bp | AATCCGAAAAGTTCAAAGCAGTTAGAAAAGCAGCGAGTTGACAAAGAATGCCACGGCCACCTTCTCACCTaGTCGCATAATCCTTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: NPKSSKQLEKQRVDKECHGHLLT*SHNPSL Trigger: CAGGGAAGGATTATGCGATCAGGTGAGAAGGTGGCC...GTGGCATTCTTTGTCAACTCGCTGCTTTTCTAACTGCTTTGAACTTTTCGGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR TCA 90 bp | CATGTTTCCATTAGCTTGCTAGTAAATCCTACAGAGTTGTCAATTTATCCATCAGGGAGGCTGAGGACGTaGCAAGCGTCACGCTACCTG | + |
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Preference number: 4 (lower is better) Translates to: HVSISLLVNPTELSIYPSGRLRT*QASRYL Trigger: CAGGTAGCGTGACGCTTGTCACGTCCTCAGCCTCCC...TGATGGATAAATTGACAACTCTGTAGGATTTACTAGCAAGCTAATGGAAACATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR GCA 90 bp | CTACAGAGTTGTCAATTTATCCATCACCGTCTCTCTCTGAGCTTCAAATACAGACCCGGAGCTCATGGATaGTCTTCCCTTCCTGATGAG | + |
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Preference number: 4 (lower is better) Translates to: LQSCQFIHHRLSLSFKYRPGAHG*SSLPDE Trigger: CTCATCAGGAAGGGAAGAGCATCCATGAGCTCCGGG...TCTGTATTTGAAGCTCAGAGAGAGACGGTGATGGATAAATTGACAACTCTGTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR TCA 90 bp | CAACAGGTCAAAATTACTCACAGCTGGATGCAAGGGTCTTCGAAAAATGAAAGGCACGGTACAACGTCCTaGATTCGGACCTTAGGTCTT | + |
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Preference number: 4 (lower is better) Translates to: QQVKITHSWMQGSSKNERHGTTS*IRTLGL Trigger: AAGACCTAAGGTCCGAATTCAGGACGTTGTACCGTG...CCTTTCATTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTTGACCTGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR GCA 90 bp | AAAAAGTCAACAGGTCAAAATTACTCACAGCTGGATGCAAGGGTCTTCGAAAAACACACAGTTGGTCACTaGCTCCACTCGCTCCATCAG | + |
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Preference number: 4 (lower is better) Translates to: KKSTGQNYSQLDARVFEKHTVGH*LHSLHQ Trigger: CTGATGGAGCGAGTGGAGGCAGTGACCAACTGTGTG...TTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTTGACCTGTTGACTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR CCA 90 bp | AACAGGTCAAAATTACTCACAGCTGGATGCAAGGGTCTTCGAAAAATGAAAGGATCTCTCTCACACAGTTaGTCACTGCCTCCACTCGCT | + |
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Preference number: 4 (lower is better) Translates to: NRSKLLTAGCKGLRKMKGSLSHS*SLPPLA Trigger: AGCGAGTGGAGGCAGTGACCAACTGTGTGAGAGAGA...TCCTTTCATTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTTGACCTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR CCA 90 bp | AACAGGTCAAAATTACTCACAGCTGGATGCAAGGGTCTTCGAAAAATGAAAGGACTGTCGGGCCTCGATTaGTTTCGCGGTCATATCATC | + |
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Preference number: 4 (lower is better) Translates to: NRSKLLTAGCKGLRKMKGLSGLD*FRGHII Trigger: GATGATATGACCGCGAAACCAATCGAGGCCCGACAG...TCCTTTCATTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTTGACCTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR TCA 90 bp | CATGTTTCCATTAGCTTGCTAGTAAATCCTACAGAGTTGTCAATTTATCCATCACCTTCTCTGCCCCTCTaGTTACCCCCACGATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: HVSISLLVNPTELSIYPSPSLPL*LPPRWR Trigger: TCTCCATCGTGGGGGTAATCAGAGGGGCAGAGAAGG...TGATGGATAAATTGACAACTCTGTAGGATTTACTAGCAAGCTAATGGAAACATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR TCA 90 bp | CAACAGGTCAAAATTACTCACAGCTGGATGCAAGGGTCTTCGAAAAATGAAAGGAGCATCATTCACTTCTaGTGGAGACACAGGCACACT | + |
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Preference number: 4 (lower is better) Translates to: QQVKITHSWMQGSSKNERSIIHF*WRHRHT Trigger: AGTGTGCCTGTGTCTCCATCAGAAGTGAATGATGCT...CCTTTCATTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTTGACCTGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR GCA 90 bp | AAAAAGTCAACAGGTCAAAATTACTCACAGCTGGATGCAAGGGTCTTCGAAAAACTACCAGAATGCATCTaGTTCCAGCCAGTCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: KKSTGQNYSQLDARVFEKLPECI*FQPVRV Trigger: GACCCTGACTGGCTGGAAGCAGATGCATTCTGGTAG...TTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTTGACCTGTTGACTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR GCA 90 bp | AAAAGTTCAAAGCAGTTAGAAAAGCAGCGAGTTGACAAAGAATGCCACTTGAGAAAGGCTACGATTGAATaGTGGGAGGCTGAGGACGTG | + |
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Preference number: 4 (lower is better) Translates to: KSSKQLEKQRVDKECHLRKATIE*WEAEDV Trigger: CACGTCCTCAGCCTCCCAGCATTCAATCGTAGCCTT...TCTCAAGTGGCATTCTTTGTCAACTCGCTGCTTTTCTAACTGCTTTGAACTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR GCA 90 bp | AAAAAGTCAACAGGTCAAAATTACTCACAGCTGGATGCAAGGGTCTTCGAAAAACAGCAGCAGAAATGCTaGCATAGCTCCCAAACCCAC | + |
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Preference number: 4 (lower is better) Translates to: KKSTGQNYSQLDARVFEKQQQKC*HSSQTH Trigger: GTGGGTTTGGGAGCTATGGCAGCATTTCTGCTGCTG...TTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTTGACCTGTTGACTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR CCA 90 bp | AAAAGTTCAAAGCAGTTAGAAAAGCAGCGAGTTGACAAAGAATGCCACTTGAGAGCTACGATTGAATGCTaGGAGGCTGAGGACGTGACA | + |
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Preference number: 4 (lower is better) Translates to: KSSKQLEKQRVDKECHLRATIEC*EAEDVT Trigger: TGTCACGTCCTCAGCCTCCCAGCATTCAATCGTAGC...TCTCAAGTGGCATTCTTTGTCAACTCGCTGCTTTTCTAACTGCTTTGAACTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR CCA 90 bp | CAACAGGTCAAAATTACTCACAGCTGGATGCAAGGGTCTTCGAAAAATGAAAGGCCCACGATGGAGACCTaGGAAACTATAATTCCCCTA | + |
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Preference number: 4 (lower is better) Translates to: QQVKITHSWMQGSSKNERPTMET*ETIIPL Trigger: TAGGGGAATTATAGTTTCCCAGGTCTCCATCGTGGG...CCTTTCATTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTTGACCTGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR TCA 90 bp | AATCCGAAAAGTTCAAAGCAGTTAGAAAAGCAGCGAGTTGACAAAGAATGCCACCCAGAATATGCACGGTaGACTCGTTCATGTCCTCTA | + |
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Preference number: 4 (lower is better) Translates to: NPKSSKQLEKQRVDKECHPEYAR*TRSCPL Trigger: TAGAGGACATGAACGAGTTCACCGTGCATATTCTGG...GTGGCATTCTTTGTCAACTCGCTGCTTTTCTAACTGCTTTGAACTTTTCGGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR TCA 90 bp | CTACAGAGTTGTCAATTTATCCATCACCGTCTCTCTCTGAGCTTCAAATACAGATGGATGAAATTGCGGTaGCTCTCATCGTTATCCCCA | + |
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Preference number: 4 (lower is better) Translates to: LQSCQFIHHRLSLSFKYRWMKLR*LSSLSP Trigger: TGGGGATAACGATGAGAGTCACCGCAATTTCATCCA...TCTGTATTTGAAGCTCAGAGAGAGACGGTGATGGATAAATTGACAACTCTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR TCA 90 bp | AAAAGTTCAAAGCAGTTAGAAAAGCAGCGAGTTGACAAAGAATGCCACTTGAGAGCACTTCGTCCTGGATaGAATTGCGGTGACTCTCAT | + |
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Preference number: 4 (lower is better) Translates to: KSSKQLEKQRVDKECHLRALRPG*NCGDSH Trigger: ATGAGAGTCACCGCAATTTCATCCAGGACGAAGTGC...TCTCAAGTGGCATTCTTTGTCAACTCGCTGCTTTTCTAACTGCTTTGAACTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR TCA 90 bp | CCGAAAAGTTCAAAGCAGTTAGAAAAGCAGCGAGTTGACAAAGAATGCCACTTGAGAAAAGCAGCGAGTTaGCAAAGAATGCCACTTGAG | + |
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Preference number: 4 (lower is better) Translates to: PKSSKQLEKQRVDKECHLRKAAS*QRMPLE Trigger: CTCAAGTGGCATTCTTTGTCAACTCGCTGCTTTTCT...CAAGTGGCATTCTTTGTCAACTCGCTGCTTTTCTAACTGCTTTGAACTTTTCGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR GCA 90 bp | AAAAAGTCAACAGGTCAAAATTACTCACAGCTGGATGCAAGGGTCTTCGAAAAACATCAGCAGCAGAAATaGTGCCATAGCTCCCAAACC | + |
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Preference number: 4 (lower is better) Translates to: KKSTGQNYSQLDARVFEKHQQQK*CHSSQT Trigger: GGTTTGGGAGCTATGGCAGCATTTCTGCTGCTGATG...TTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTTGACCTGTTGACTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR GCA 90 bp | CTACAGAGTTGTCAATTTATCCATCACCGTCTCTCTCTGAGCTTCAAATACAGATCAGCAGACTTAAAATaGTCCCGATCCACAGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: LQSCQFIHHRLSLSFKYRSADLK*SRSTVG Trigger: TCCCACTGTGGATCGGGAGCATTTTAAGTCTGCTGA...TCTGTATTTGAAGCTCAGAGAGAGACGGTGATGGATAAATTGACAACTCTGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR CCA 90 bp | AAAAAGTCAACAGGTCAAAATTACTCACAGCTGGATGCAAGGGTCTTCGAAAAAGCGTCACGCTACCTGTaGACCAATCAACTACCAGAA | + |
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Preference number: 4 (lower is better) Translates to: KKSTGQNYSQLDARVFEKASRYL*TNQLPE Trigger: TTCTGGTAGTTGATTGGTCCACAGGTAGCGTGACGC...TTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTTGACCTGTTGACTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR TCA 90 bp | GTCAAAATTACTCACAGCTGGATGCAAGGGTCTTCGAAAAATGAAAGGATGTTTGACATATACTCCGACTaGCAATGGAGTCACCTGCTT | + |
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Preference number: 4 (lower is better) Translates to: VKITHSWMQGSSKNERMFDIYSD*QWSHLL Trigger: AAGCAGGTGACTCCATTGTCAGTCGGAGTATATGTC...AAACATCCTTTCATTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTTGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR TCA 90 bp | AACAGGTCAAAATTACTCACAGCTGGATGCAAGGGTCTTCGAAAAATGAAAGGATTTTCGCTGGCTCCCTaGCTGCAACTAGTTTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: NRSKLLTAGCKGLRKMKGFSLAP*LQLVFL Trigger: AAGAAAAACTAGTTGCAGTCAGGGAGCCAGCGAAAA...TCCTTTCATTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTTGACCTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR GCA 90 bp | AATCCGAAAAGTTCAAAGCAGTTAGAAAAGCAGCGAGTTGACAAAGAATGCCACAATCAACTACCAGAATaGATCTGCTTCCAGCCAGTC | + |
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Preference number: 4 (lower is better) Translates to: NPKSSKQLEKQRVDKECHNQLPE*ICFQPV Trigger: GACTGGCTGGAAGCAGATGCATTCTGGTAGTTGATT...GTGGCATTCTTTGTCAACTCGCTGCTTTTCTAACTGCTTTGAACTTTTCGGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR GCA 90 bp | CAACAGGTCAAAATTACTCACAGCTGGATGCAAGGGTCTTCGAAAAATGAAAGGCTTAATAGCAGGAGTTaGATCTCTCTCACACAGTTG | + |
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Preference number: 4 (lower is better) Translates to: QQVKITHSWMQGSSKNERLNSRS*ISLTQL Trigger: CAACTGTGTGAGAGAGATGCAACTCCTGCTATTAAG...CCTTTCATTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTTGACCTGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR GCA 90 bp | CTACAGAGTTGTCAATTTATCCATCACCGTCTCTCTCTGAGCTTCAAATACAGAGACAATGGAGTCACCTaGTTGACTTTCTCTCTACCA | + |
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Preference number: 4 (lower is better) Translates to: LQSCQFIHHRLSLSFKYRDNGVT*LTFSLP Trigger: TGGTAGAGAGAAAGTCAAGCAGGTGACTCCATTGTC...TCTGTATTTGAAGCTCAGAGAGAGACGGTGATGGATAAATTGACAACTCTGTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR CCA 90 bp | AACAGGTCAAAATTACTCACAGCTGGATGCAAGGGTCTTCGAAAAATGAAAGGACGGACCTTAGGTCTTTaGGTCTTAATAGCAGGAGTT | + |
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Preference number: 4 (lower is better) Translates to: NRSKLLTAGCKGLRKMKGRTLGL*VLIAGV Trigger: AACTCCTGCTATTAAGACCCAAAGACCTAAGGTCCG...TCCTTTCATTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTTGACCTGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR TCA 90 bp | AACAGGTCAAAATTACTCACAGCTGGATGCAAGGGTCTTCGAAAAATGAAAGGAGGATACCAAACACTTTaGCATATACTCCGACTGACA | + |
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Preference number: 4 (lower is better) Translates to: NRSKLLTAGCKGLRKMKGGYQTL*HILRLT Trigger: TGTCAGTCGGAGTATATGTCAAAGTGTTTGGTATCC...TCCTTTCATTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTTGACCTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR TCA 90 bp | GTCAAAATTACTCACAGCTGGATGCAAGGGTCTTCGAAAAATGAAAGGATGTTTGCATCATGTGTGCATTaGCCGTTTCCAGAATATGCA | + |
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Preference number: 4 (lower is better) Translates to: VKITHSWMQGSSKNERMFASCVH*PFPEYA Trigger: TGCATATTCTGGAAACGGTCAATGCACACATGATGC...AAACATCCTTTCATTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR GCA 90 bp | CTACAGAGTTGTCAATTTATCCATCACCGTCTCTCTCTGAGCTTCAAATACAGATTACTCACAGCTGGATaGAAGGGTCTTCGAAAAATG | + |
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Preference number: 4 (lower is better) Translates to: LQSCQFIHHRLSLSFKYRLLTAG*KGLRKM Trigger: CATTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAA...TCTGTATTTGAAGCTCAGAGAGAGACGGTGATGGATAAATTGACAACTCTGTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR CCA 90 bp | GTCAAAATTACTCACAGCTGGATGCAAGGGTCTTCGAAAAATGAAAGGATGTTTGCACACTTTCTACAGTaGTATCACGACGGGCTTTAT | + |
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Preference number: 4 (lower is better) Translates to: VKITHSWMQGSSKNERMFAHFLQ*YHDGLY Trigger: ATAAAGCCCGTCGTGATACCACTGTAGAAAGTGTGC...AAACATCCTTTCATTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR CCA 90 bp | CCTACAGAGTTGTCAATTTATCCATCACCGTCTCTCTCTGAGCTTCAAATACAGAAAATTACTCACAGCTaGATGCAAGGGTCTTCGAAA | + |
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Preference number: 4 (lower is better) Translates to: PTELSIYPSPSLSELQIQKITHS*MQGSSK Trigger: TTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTT...CTGTATTTGAAGCTCAGAGAGAGACGGTGATGGATAAATTGACAACTCTGTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR TCA 90 bp | AACAGGTCAAAATTACTCACAGCTGGATGCAAGGGTCTTCGAAAAATGAAAGGAATGTCCTCTAGGACATaGATTTTCAATACCTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: NRSKLLTAGCKGLRKMKGMSSRT*IFNTSR Trigger: CCTTGAGGTATTGAAAATTCATGTCCTAGAGGACAT...TCCTTTCATTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTTGACCTGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR GCA 90 bp | AAAAGTTCAAAGCAGTTAGAAAAGCAGCGAGTTGACAAAGAATGCCACTTGAGAATCCAGCATCATGTGTaGATTGACCGTTTCCAGAAT | + |
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Preference number: 4 (lower is better) Translates to: KSSKQLEKQRVDKECHLRIQHHV*IDRFQN Trigger: ATTCTGGAAACGGTCAATGCACACATGATGCTGGAT...TCTCAAGTGGCATTCTTTGTCAACTCGCTGCTTTTCTAACTGCTTTGAACTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| 3UTR CAA 72 bp | CATGTTTCCATTAGCTTGCTAGTAAATCCTACAGAGTaGTCAATTTATCCATCACCGTCTCTCTCTGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: HVSISLLVNPTE*SIYPSPSLSEL Trigger: AAGCTCAGAGAGAGACGGTGATGGATAAATTGACAACTCTGTAGGATTTACTAGCAAGCTAATGGAAACATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR CCA 90 bp | CATGTTTCCATTAGCTTGCTAGTAAATCCTACAGAGTTGTCAATTTATCCATCAGTAGAGCTGAGAAGCTaGTTCACATTACACGGTACA | + |
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Preference number: 4 (lower is better) Translates to: HVSISLLVNPTELSIYPSVELRS*FTLHGT Trigger: TGTACCGTGTAATGTGAACCAGCTTCTCAGCTCTAC...TGATGGATAAATTGACAACTCTGTAGGATTTACTAGCAAGCTAATGGAAACATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR GCA 90 bp | CATGTTTCCATTAGCTTGCTAGTAAATCCTACAGAGTTGTCAATTTATCCATCACTGTGTGTCAGTGGTTaGTACATTCTAAAAGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: HVSISLLVNPTELSIYPSLCVSG*YILKVP Trigger: TGGGACTTTTAGAATGTAGCAACCACTGACACACAG...TGATGGATAAATTGACAACTCTGTAGGATTTACTAGCAAGCTAATGGAAACATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS TCA 90 bp | AGGAGAAGGTGGGCTTTGGCTCGTCTGGGGCTCCACGGACGGCTTTaGGTTCTCCACAGAAGGCTTCGAGCTCTCCACAGAAGGCTTCGA | + |
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Preference number: 5 (lower is better) Translates to: RRRWALARLGLHGRL*VLHRRLRALHRRLR Trigger: TCGAAGCCTTCTGTGGAGAGCTCGAAGCCTTCTGTGGAGAACTCAAAGCCGTCCGTGGAGCCCCAGACGAGCCAAAGCCCACCTTCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS GCA 90 bp | GCTCTCCACAGAAGGCTTCGAGCTGTCCGAAAGGCTACGATTGAATaGTGGGAGGCTGAGGACGTGACAAGCGTCACGCTACCTGTGGAC | + |
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Preference number: 5 (lower is better) Translates to: ALHRRLRAVRKATIE*WEAEDVTSVTLPVD Trigger: GTCCACAGGTAGCGTGACGCTTGTCACGTCCTCAGCCTCCCAGCATTCAATCGTAGCCTTTCGGACAGCTCGAAGCCTTCTGTGGAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS CCA 90 bp | CTCCACAGAAGGCTTCGAGCTGTCCGAAAGGCTACGATTGAATGCTaGGAGGCTGAGGACGTGACAAGCGTCACGCTACCTGTGGACCAA | + |
|
Preference number: 5 (lower is better) Translates to: LHRRLRAVRKATIEC*EAEDVTSVTLPVDQ Trigger: TTGGTCCACAGGTAGCGTGACGCTTGTCACGTCCTCAGCCTCCCAGCATTCAATCGTAGCCTTTCGGACAGCTCGAAGCCTTCTGTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS TCA 90 bp | GAGCTGTCCGAAAGGCTACGATTGAATGCTGGGAGGCTGAGGACGTaGCAAGCGTCACGCTACCTGTGGACCAATCAACTACCAGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: ELSERLRLNAGRLRT*QASRYLWTNQLPEC Trigger: GCATTCTGGTAGTTGATTGGTCCACAGGTAGCGTGACGCTTGTCACGTCCTCAGCCTCCCAGCATTCAATCGTAGCCTTTCGGACAGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS GCA 90 bp | ACAGTTGGTCACTGCCTCCACTCGCTCCATCAGCAGCAGAAATGCTaGCATAGCTCCCAAACCCACTCTTACTCATCTTCAAGACAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TVGHCLHSLHQQQKC*HSSQTHSYSSSRQL Trigger: GAGCTGTCTTGAAGATGAGTAAGAGTGGGTTTGGGAGCTATGGCAGCATTTCTGCTGCTGATGGAGCGAGTGGAGGCAGTGACCAACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS GCA 90 bp | CACACAGTTGGTCACTGCCTCCACTCGCTCCATCAGCAGCAGAAATaGTGCCATAGCTCCCAAACCCACTCTTACTCATCTTCAAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: HTVGHCLHSLHQQQK*CHSSQTHSYSSSRQ Trigger: CTGTCTTGAAGATGAGTAAGAGTGGGTTTGGGAGCTATGGCAGCATTTCTGCTGCTGATGGAGCGAGTGGAGGCAGTGACCAACTGTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS CCA 90 bp | GGTCTTTGGGTCTTAATAGCAGGAGTTGCATCTCTCTCACACAGTTaGTCACTGCCTCCACTCGCTCCATCAGCAGCAGAAATGCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GLWVLIAGVASLSHS*SLPPLAPSAAEMLP Trigger: TGGCAGCATTTCTGCTGCTGATGGAGCGAGTGGAGGCAGTGACCAACTGTGTGAGAGAGATGCAACTCCTGCTATTAAGACCCAAAGACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS GCA 90 bp | GTCCTGAATTCGGACCTTAGGTCTTTGGGTCTTAATAGCAGGAGTTaGATCTCTCTCACACAGTTGGTCACTGCCTCCACTCGCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: VLNSDLRSLGLNSRS*ISLTQLVTASTRSI Trigger: GATGGAGCGAGTGGAGGCAGTGACCAACTGTGTGAGAGAGATGCAACTCCTGCTATTAAGACCCAAAGACCTAAGGTCCGAATTCAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS TCA 90 bp | GAAATTGCGGTGACTCTCATCGTTATCCCCAGCATCATTCACTTCTaGTGGAGACACAGGCACACTTTCTACAGTGGTATCACGACGGGC | + |
|
Preference number: 5 (lower is better) Translates to: EIAVTLIVIPSIIHF*WRHRHTFYSGITTG Trigger: GCCCGTCGTGATACCACTGTAGAAAGTGTGCCTGTGTCTCCATCAGAAGTGAATGATGCTGGGGATAACGATGAGAGTCACCGCAATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR CAA 90 bp | AAAAAGTCAACAGGTCAAAATTACTCACAGCTGGATGCAAGGGTCTTCGAAAAAAGGAGAAGGTGGGCTTaGGCTCGTCTGGGGCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: KKSTGQNYSQLDARVFEKRRRWA*ARLGLH Trigger: GTGGAGCCCCAGACGAGCCAAAGCCCACCTTCTCCT...TTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTTGACCTGTTGACTTTTT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR CAA 90 bp | CAACAGGTCAAAATTACTCACAGCTGGATGCAAGGGTCTTCGAAAAATGAAAGGGCTTCCTTGATGGCCTaGACGCTAAGGTCGCAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QQVKITHSWMQGSSKNERASLMA*TLRSQS Trigger: GCTCTGCGACCTTAGCGTCAAGGCCATCAAGGAAGC...CCTTTCATTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTTGACCTGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS TCA 90 bp | CCTGATGAGGACACTCATGAATCAAACGCAGCACTTCGTCCTGGATaGAATTGCGGTGACTCTCATCGTTATCCCCAGCATCATTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: PDEDTHESNAALRPG*NCGDSHRYPQHHSL Trigger: AAGTGAATGATGCTGGGGATAACGATGAGAGTCACCGCAATTTCATCCAGGACGAAGTGCTGCGTTTGATTCATGAGTGTCCTCATCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS TCA 90 bp | ACAGTAGAGCTGAGAAGCTGGTTCACATTACACGGTACAACGTCCTaGATTCGGACCTTAGGTCTTTGGGTCTTAATAGCAGGAGTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: TVELRSWFTLHGTTS*IRTLGLWVLIAGVA Trigger: TGCAACTCCTGCTATTAAGACCCAAAGACCTAAGGTCCGAATTCAGGACGTTGTACCGTGTAATGTGAACCAGCTTCTCAGCTCTACTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS GCA 90 bp | ATACCAAACACTTTGACATATACTCCGACTGACAATGGAGTCACCTaGTTGACTTTCTCTCTACCAAACCACTGTCGGGCCTCGATTGGT | + |
|
Preference number: 5 (lower is better) Translates to: IPNTLTYTPTDNGVT*LTFSLPNHCRASIG Trigger: ACCAATCGAGGCCCGACAGTGGTTTGGTAGAGAGAAAGTCAAGCAGGTGACTCCATTGTCAGTCGGAGTATATGTCAAAGTGTTTGGTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS TCA 90 bp | CGTGGGACATTTGAGGATACCAAACACTTTGACATATACTCCGACTaGCAATGGAGTCACCTGCTTGACTTTCTCTCTACCAAACCACTG | + |
|
Preference number: 5 (lower is better) Translates to: RGTFEDTKHFDIYSD*QWSHLLDFLSTKPL Trigger: CAGTGGTTTGGTAGAGAGAAAGTCAAGCAGGTGACTCCATTGTCAGTCGGAGTATATGTCAAAGTGTTTGGTATCCTCAAATGTCCCACG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR CAA 90 bp | AAAAGTTCAAAGCAGTTAGAAAAGCAGCGAGTTGACAAAGAATGCCACTTGAGATCCGAAAGGCTACGATaGAATGCTGGGAGGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KSSKQLEKQRVDKECHLRSERLR*NAGRLR Trigger: CCTCAGCCTCCCAGCATTCAATCGTAGCCTTTCGGA...TCTCAAGTGGCATTCTTTGTCAACTCGCTGCTTTTCTAACTGCTTTGAACTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR CAA 90 bp | CCTACAGAGTTGTCAATTTATCCATCACCGTCTCTCTCTGAGCTTCAAATACAGCCTGTGTGTCAGTGGTaGCTACATTCTAAAAGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PTELSIYPSPSLSELQIQPVCQW*LHSKSP Trigger: GGGACTTTTAGAATGTAGCAACCACTGACACACAGG...CTGTATTTGAAGCTCAGAGAGAGACGGTGATGGATAAATTGACAACTCTGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR CAA 90 bp | GTCAAAATTACTCACAGCTGGATGCAAGGGTCTTCGAAAAATGAAAGGATGTTTACTGTCGGGCCTCGATaGGTTTCGCGGTCATATCAT | + |
|
Preference number: 5 (lower is better) Translates to: VKITHSWMQGSSKNERMFTVGPR*VSRSYH Trigger: ATGATATGACCGCGAAACCAATCGAGGCCCGACAGT...AAACATCCTTTCATTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR CAA 90 bp | CAACAGGTCAAAATTACTCACAGCTGGATGCAAGGGTCTTCGAAAAATGAAAGGGTTCCCGTGGGACATTaGAGGATACCAAACACTTTG | + |
|
Preference number: 5 (lower is better) Translates to: QQVKITHSWMQGSSKNERVPVGH*RIPNTL Trigger: CAAAGTGTTTGGTATCCTCAAATGTCCCACGGGAAC...CCTTTCATTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTTGACCTGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR CAA 90 bp | CATGTTTCCATTAGCTTGCTAGTAAATCCTACAGAGTTGTCAATTTATCCATCAATCTCTCTCACACAGTaGGTCACTGCCTCCACTCGC | + |
|
Preference number: 5 (lower is better) Translates to: HVSISLLVNPTELSIYPSISLTQ*VTASTR Trigger: GCGAGTGGAGGCAGTGACCAACTGTGTGAGAGAGAT...TGATGGATAAATTGACAACTCTGTAGGATTTACTAGCAAGCTAATGGAAACATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
||
| CDS-3UTR CAA 90 bp | CTACAGAGTTGTCAATTTATCCATCACCGTCTCTCTCTGAGCTTCAAATACAGATCGGACCTTAGGTCTTaGGGTCTTAATAGCAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LQSCQFIHHRLSLSFKYRSDLRS*GLNSRS Trigger: ACTCCTGCTATTAAGACCCAAAGACCTAAGGTCCGA...TCTGTATTTGAAGCTCAGAGAGAGACGGTGATGGATAAATTGACAACTCTGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR CAA 90 bp | AAAAAGTCAACAGGTCAAAATTACTCACAGCTGGATGCAAGGGTCTTCGAAAAAAATGGAGTCACCTGCTaGACTTTCTCTCTACCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: KKSTGQNYSQLDARVFEKNGVTC*TFSLPN Trigger: GTTTGGTAGAGAGAAAGTCAAGCAGGTGACTCCATT...TTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTTGACCTGTTGACTTTTT 41% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR CAA 90 bp | AAAAGTTCAAAGCAGTTAGAAAAGCAGCGAGTTGACAAAGAATGCCACTTGAGAATAATTCCCCTAACCTaGAACACAGGGTCAAACACA | + |
|
Preference number: 5 (lower is better) Translates to: KSSKQLEKQRVDKECHLRIIPLT*NTGSNT Trigger: TGTGTTTGACCCTGTGTTCAAGGTTAGGGGAATTAT...TCTCAAGTGGCATTCTTTGTCAACTCGCTGCTTTTCTAACTGCTTTGAACTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR CAA 90 bp | GTCAAAATTACTCACAGCTGGATGCAAGGGTCTTCGAAAAATGAAAGGATGTTTAGGATACCAAACACTTaGACATATACTCCGACTGAC | + |
|
Preference number: 5 (lower is better) Translates to: VKITHSWMQGSSKNERMFRIPNT*TYTPTD Trigger: GTCAGTCGGAGTATATGTCAAAGTGTTTGGTATCCT...AAACATCCTTTCATTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTTGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS-3UTR CAA 90 bp | GTCAAAATTACTCACAGCTGGATGCAAGGGTCTTCGAAAAATGAAAGGATGTTTGTAAATCCTACAGAGTaGTCAATTTATCCATCACCG | + |
|
Preference number: 5 (lower is better) Translates to: VKITHSWMQGSSKNERMFVNPTE*SIYPSP Trigger: CGGTGATGGATAAATTGACAACTCTGTAGGATTTAC...AAACATCCTTTCATTTTTCGAAGACCCTTGCATCCAGCTGTGAGTAATTTTGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS CAA 72 bp | GTGGGCTTTGGCTCGTCTGGGGCTCCACGGACGGCTTaGAGTTCTCCACAGAAGGCTTCGAGCTCTCCACAG | + |
|
Preference number: 6 (lower is better) Translates to: VGFGSSGAPRTA*SSPQKASSSPQ Trigger: CTGTGGAGAGCTCGAAGCCTTCTGTGGAGAACTCAAAGCCGTCCGTGGAGCCCCAGACGAGCCAAAGCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS CAA 90 bp | GAGGAGAAGGTGGGCTTTGGCTCGTCTGGGGCTCCACGGACGGCTTaGAGTTCTCCACAGAAGGCTTCGAGCTCTCCACAGAAGGCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: EEKVGFGSSGAPRTA*SSPQKASSSPQKAS Trigger: CGAAGCCTTCTGTGGAGAGCTCGAAGCCTTCTGTGGAGAACTCAAAGCCGTCCGTGGAGCCCCAGACGAGCCAAAGCCCACCTTCTCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS TCA 72 bp | TGGGCTTTGGCTCGTCTGGGGCTCCACGGACGGCTTTaGGTTCTCCACAGAAGGCTTCGAGCTCTCCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: WALARLGLHGRL*VLHRRLRALHR Trigger: TCTGTGGAGAGCTCGAAGCCTTCTGTGGAGAACTCAAAGCCGTCCGTGGAGCCCCAGACGAGCCAAAGCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS TCA 72 bp | TGCTTCCAGCCAGTCAGGGTCGGCCACCTTCTCACCTaGTCGCATAATCCTTCCCTGTGTGTCAGTGGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: CFQPVRVGHLLT*SHNPSLCVSGC Trigger: GCAACCACTGACACACAGGGAAGGATTATGCGATCAGGTGAGAAGGTGGCCGACCCTGACTGGCTGGAAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS GCA 72 bp | CGCTACCTGTGGACCAATCAACTACCAGAATGCATCTaGTTCCAGCCAGTCAGGGTCGGCCACCTTCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: RYLWTNQLPECI*FQPVRVGHLLT Trigger: GGTGAGAAGGTGGCCGACCCTGACTGGCTGGAAGCAGATGCATTCTGGTAGTTGATTGGTCCACAGGTAGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS GCA 72 bp | GCGTCACGCTACCTGTGGACCAATCAACTACCAGAATaGATCTGCTTCCAGCCAGTCAGGGTCGGCCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: ASRYLWTNQLPE*ICFQPVRVGHL Trigger: AAGGTGGCCGACCCTGACTGGCTGGAAGCAGATGCATTCTGGTAGTTGATTGGTCCACAGGTAGCGTGACGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS CCA 72 bp | AGGCTTCGAGCTGTCCGAAAGGCTACGATTGAATGCTaGGAGGCTGAGGACGTGACAAGCGTCACGCTACCT | + |
|
Preference number: 6 (lower is better) Translates to: RLRAVRKATIEC*EAEDVTSVTLP Trigger: AGGTAGCGTGACGCTTGTCACGTCCTCAGCCTCCCAGCATTCAATCGTAGCCTTTCGGACAGCTCGAAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS GCA 72 bp | AGAAGGCTTCGAGCTGTCCGAAAGGCTACGATTGAATaGTGGGAGGCTGAGGACGTGACAAGCGTCACGCTA | + |
|
Preference number: 6 (lower is better) Translates to: RRLRAVRKATIE*WEAEDVTSVTL Trigger: TAGCGTGACGCTTGTCACGTCCTCAGCCTCCCAGCATTCAATCGTAGCCTTTCGGACAGCTCGAAGCCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS GCA 72 bp | GGTCACTGCCTCCACTCGCTCCATCAGCAGCAGAAATaGTGCCATAGCTCCCAAACCCACTCTTACTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: GHCLHSLHQQQK*CHSSQTHSYSS Trigger: AGATGAGTAAGAGTGGGTTTGGGAGCTATGGCAGCATTTCTGCTGCTGATGGAGCGAGTGGAGGCAGTGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS TCA 72 bp | GAAAGGCTACGATTGAATGCTGGGAGGCTGAGGACGTaGCAAGCGTCACGCTACCTGTGGACCAATCAACTA | + |
|
Preference number: 6 (lower is better) Translates to: ERLRLNAGRLRT*QASRYLWTNQL Trigger: TAGTTGATTGGTCCACAGGTAGCGTGACGCTTGTCACGTCCTCAGCCTCCCAGCATTCAATCGTAGCCTTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS GCA 72 bp | CACTGCCTCCACTCGCTCCATCAGCAGCAGAAATGCTaGCATAGCTCCCAAACCCACTCTTACTCATCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: HCLHSLHQQQKC*HSSQTHSYSSS Trigger: TGAAGATGAGTAAGAGTGGGTTTGGGAGCTATGGCAGCATTTCTGCTGCTGATGGAGCGAGTGGAGGCAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS CAA 90 bp | AGGTCTTTGGGTCTTAATAGCAGGAGTTGCATCTCTCTCACACAGTaGGTCACTGCCTCCACTCGCTCCATCAGCAGCAGAAATGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: RSLGLNSRSCISLTQ*VTASTRSISSRNAA Trigger: GGCAGCATTTCTGCTGCTGATGGAGCGAGTGGAGGCAGTGACCAACTGTGTGAGAGAGATGCAACTCCTGCTATTAAGACCCAAAGACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS CCA 72 bp | GTCTTAATAGCAGGAGTTGCATCTCTCTCACACAGTTaGTCACTGCCTCCACTCGCTCCATCAGCAGCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: VLIAGVASLSHS*SLPPLAPSAAE Trigger: TTCTGCTGCTGATGGAGCGAGTGGAGGCAGTGACCAACTGTGTGAGAGAGATGCAACTCCTGCTATTAAGAC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS GCA 72 bp | TCGGACCTTAGGTCTTTGGGTCTTAATAGCAGGAGTTaGATCTCTCTCACACAGTTGGTCACTGCCTCCACT | + |
|
Preference number: 6 (lower is better) Translates to: SDLRSLGLNSRS*ISLTQLVTAST Trigger: AGTGGAGGCAGTGACCAACTGTGTGAGAGAGATGCAACTCCTGCTATTAAGACCCAAAGACCTAAGGTCCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS CAA 72 bp | TTGACATATACTCCGACTGACAATGGAGTCACCTGCTaGACTTTCTCTCTACCAAACCACTGTCGGGCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: LTYTPTDNGVTC*TFSLPNHCRAS Trigger: CGAGGCCCGACAGTGGTTTGGTAGAGAGAAAGTCAAGCAGGTGACTCCATTGTCAGTCGGAGTATATGTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS TCA 72 bp | GACACTCATGAATCAAACGCAGCACTTCGTCCTGGATaGAATTGCGGTGACTCTCATCGTTATCCCCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: DTHESNAALRPG*NCGDSHRYPQH Trigger: ATGCTGGGGATAACGATGAGAGTCACCGCAATTTCATCCAGGACGAAGTGCTGCGTTTGATTCATGAGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS GCA 72 bp | ACTTTGACATATACTCCGACTGACAATGGAGTCACCTaGTTGACTTTCTCTCTACCAAACCACTGTCGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TLTYTPTDNGVT*LTFSLPNHCRA Trigger: GGCCCGACAGTGGTTTGGTAGAGAGAAAGTCAAGCAGGTGACTCCATTGTCAGTCGGAGTATATGTCAAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS CCA 72 bp | TCACTTCTGATGGAGACACAGGCACACTTTCTACAGTaGTATCACGACGGGCTTTATCCAGCATCATGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: SLLMETQAHFLQ*YHDGLYPASCV Trigger: CACACATGATGCTGGATAAAGCCCGTCGTGATACCACTGTAGAAAGTGTGCCTGTGTCTCCATCAGAAGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS CAA 90 bp | ATTACCCCCACGATGGAGACCTGGGAAACTATAATTCCCCTAACCTaGAACACAGGGTCAAACACAGTAGAGCTGAGAAGCTGGTTCACA | + |
|
Preference number: 6 (lower is better) Translates to: ITPTMETWETIIPLT*NTGSNTVELRSWFT Trigger: TGTGAACCAGCTTCTCAGCTCTACTGTGTTTGACCCTGTGTTCAAGGTTAGGGGAATTATAGTTTCCCAGGTCTCCATCGTGGGGGTAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS CAA 90 bp | CCAAACACTTTGACATATACTCCGACTGACAATGGAGTCACCTGCTaGACTTTCTCTCTACCAAACCACTGTCGGGCCTCGATTGGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PNTLTYTPTDNGVTC*TFSLPNHCRASIGF Trigger: GAAACCAATCGAGGCCCGACAGTGGTTTGGTAGAGAGAAAGTCAAGCAGGTGACTCCATTGTCAGTCGGAGTATATGTCAAAGTGTTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS CAA 90 bp | GTTCACATTACACGGTACAACGTCCTGAATTCGGACCTTAGGTCTTaGGGTCTTAATAGCAGGAGTTGCATCTCTCTCACACAGTTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: VHITRYNVLNSDLRS*GLNSRSCISLTQLV Trigger: GACCAACTGTGTGAGAGAGATGCAACTCCTGCTATTAAGACCCAAAGACCTAAGGTCCGAATTCAGGACGTTGTACCGTGTAATGTGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS TCA 72 bp | GTGACTCTCATCGTTATCCCCAGCATCATTCACTTCTaGTGGAGACACAGGCACACTTTCTACAGTGGTATC | + |
|
Preference number: 6 (lower is better) Translates to: VTLIVIPSIIHF*WRHRHTFYSGI Trigger: GATACCACTGTAGAAAGTGTGCCTGTGTCTCCATCAGAAGTGAATGATGCTGGGGATAACGATGAGAGTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373040.4 |
||
| CDS CAA 72 bp | ACACGGTACAACGTCCTGAATTCGGACCTTAGGTCTTaGGGTCTTAATAGCAGGAGTTGCATCTCTCTCACA | + |
|
Preference number: 6 (lower is better) Translates to: TRYNVLNSDLRS*GLNSRSCISLT Trigger: TGTGAGAGAGATGCAACTCCTGCTATTAAGACCCAAAGACCTAAGGTCCGAATTCAGGACGTTGTACCGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
||
| CDS CAA 72 bp | ACGATGGAGACCTGGGAAACTATAATTCCCCTAACCTaGAACACAGGGTCAAACACAGTAGAGCTGAGAAGC | + |
|
Preference number: 6 (lower is better) Translates to: TMETWETIIPLT*NTGSNTVELRS Trigger: GCTTCTCAGCTCTACTGTGTTTGACCCTGTGTTCAAGGTTAGGGGAATTATAGTTTCCCAGGTCTCCATCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS CAA 90 bp | TCAAGGCTCTTTGTTCCCGTGGGACATTTGAGGATACCAAACACTTaGACATATACTCCGACTGACAATGGAGTCACCTGCTTGACTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SRLFVPVGHLRIPNT*TYTPTDNGVTCLTF Trigger: GAAAGTCAAGCAGGTGACTCCATTGTCAGTCGGAGTATATGTCAAAGTGTTTGGTATCCTCAAATGTCCCACGGGAACAAAGAGCCTTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS TCA 72 bp | CTGAGAAGCTGGTTCACATTACACGGTACAACGTCCTaGATTCGGACCTTAGGTCTTTGGGTCTTAATAGCA | + |
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Preference number: 6 (lower is better) Translates to: LRSWFTLHGTTS*IRTLGLWVLIA Trigger: TGCTATTAAGACCCAAAGACCTAAGGTCCGAATTCAGGACGTTGTACCGTGTAATGTGAACCAGCTTCTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS CAA 72 bp | TTTGTTCCCGTGGGACATTTGAGGATACCAAACACTTaGACATATACTCCGACTGACAATGGAGTCACCTGC | + |
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Preference number: 6 (lower is better) Translates to: FVPVGHLRIPNT*TYTPTDNGVTC Trigger: GCAGGTGACTCCATTGTCAGTCGGAGTATATGTCAAAGTGTTTGGTATCCTCAAATGTCCCACGGGAACAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS TCA 72 bp | TTTGAGGATACCAAACACTTTGACATATACTCCGACTaGCAATGGAGTCACCTGCTTGACTTTCTCTCTACC | + |
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Preference number: 6 (lower is better) Translates to: FEDTKHFDIYSD*QWSHLLDFLST Trigger: GGTAGAGAGAAAGTCAAGCAGGTGACTCCATTGTCAGTCGGAGTATATGTCAAAGTGTTTGGTATCCTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS CCA 72 bp | GACTTTCTCTCTACCAAACCACTGTCGGGCCTCGATTaGTTTCGCGGTCATATCATCAATTTTGTAACAAAT | + |
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Preference number: 6 (lower is better) Translates to: DFLSTKPLSGLD*FRGHIINFVTN Trigger: ATTTGTTACAAAATTGATGATATGACCGCGAAACCAATCGAGGCCCGACAGTGGTTTGGTAGAGAGAAAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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| CDS CAA 72 bp | TTCAATACCTCAAGGCTCTTTGTTCCCGTGGGACATTaGAGGATACCAAACACTTTGACATATACTCCGACT | + |
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Preference number: 6 (lower is better) Translates to: FNTSRLFVPVGH*RIPNTLTYTPT Trigger: AGTCGGAGTATATGTCAAAGTGTTTGGTATCCTCAAATGTCCCACGGGAACAAAGAGCCTTGAGGTATTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000373040.4 |
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