RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RPA1 (Homo sapiens)

Ensembl gene IDs: ENSG00000132383

Ensembl transcript IDs: ENST00000254719.10, ENST00000570451.5, ENST00000571058.5, ENST00000571725.1, ENST00000573924.1, ENST00000573994.1, ENST00000574049.1

Found 346 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTCCGCAGGCGGCATGTGCAGTGATGAACAGCAGGTCCTCTGGCTaGAGAGTGACCGCCGCACTGCCGGGGTACGACGGCGAGATGTGC +
Preference number: 1 (lower is better)
Translates to: PPQAACAVMNSRSSG*RVTAALPGYDGEMC
Trigger: GCACATCTCGCCGTCGTACCCCGGCAGTGCGGCGGTCACTCTGCAGCCAGAGGACCTGCTGTTCATCACTGCACATGCCGCCTGCGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR GCA 90 bp GGCTGCAGAGTGACCGCCGCACTGCCGGGGTACGACGGCGAGATGTaGGGCCAATGGCAGGCGGTGTGTTGCAGCCACCGGATAGATAAT +
Preference number: 1 (lower is better)
Translates to: GCRVTAALPGYDGEM*GQWQAVCCSHRIDN
Trigger: ATTATCTATCCGGTGGCTGCAACACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCGGCGGTCACTCTGCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR CCA 90 bp AAGGCGCGAGGACAGGTGTCAGCGTTCCCTGGACACGTCCTGTCCTaGTACCACGGCTGGTCAGGCCTCTTCACTGTGTGGACAGACACG +
Preference number: 1 (lower is better)
Translates to: KARGQVSAFPGHVLS*YHGWSGLFTVWTDT
Trigger: CGTGTCTGTCCACACAGTGAAGAGGCCTGACCAGCCGTGGTACCAGGACAGGACGTGTCCAGGGAACGCTGACACCTGTCCTCGCGCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR GCA 90 bp GGACACCATCACTCCCCATATCCAAAAGCCTCCGCAGGCGGCATGTaGAGTGATGAACAGCAGGTCCTCTGGCTGCAGAGTGACCGCCGC +
Preference number: 1 (lower is better)
Translates to: GHHHSPYPKASAGGM*SDEQQVLWLQSDRR
Trigger: GCGGCGGTCACTCTGCAGCCAGAGGACCTGCTGTTCATCACTGCACATGCCGCCTGCGGAGGCTTTTGGATATGGGGAGTGATGGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR CCA 90 bp TTAGAAACAGCCTCCTCGAGGGAGCCCTCCCCCTGGCACTGCCCCTaGGTTCCCAATCACATCCACGGAGACGTGCTGGTTTCATCACGC +
Preference number: 1 (lower is better)
Translates to: LETASSREPSPWHCP*VPNHIHGDVLVSSR
Trigger: GCGTGATGAAACCAGCACGTCTCCGTGGATGTGATTGGGAACCCAGGGGCAGTGCCAGGGGGAGGGCTCCCTCGAGGAGGCTGTTTCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR TCA 90 bp CCAATCACATCCACGGAGACGTGCTGGTTTCATCACGCTGGCCACTaGGAAGGCGCGAGGACAGGTGTCAGCGTTCCCTGGACACGTCCT +
Preference number: 1 (lower is better)
Translates to: PITSTETCWFHHAGH*EGARTGVSVPWTRP
Trigger: AGGACGTGTCCAGGGAACGCTGACACCTGTCCTCGCGCCTTCTCAGTGGCCAGCGTGATGAAACCAGCACGTCTCCGTGGATGTGATTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR CCA 90 bp TGGGTTCCCAATCACATCCACGGAGACGTGCTGGTTTCATCACGCTaGCCACTGAGAAGGCGCGAGGACAGGTGTCAGCGTTCCCTGGAC +
Preference number: 1 (lower is better)
Translates to: WVPNHIHGDVLVSSR*PLRRREDRCQRSLD
Trigger: GTCCAGGGAACGCTGACACCTGTCCTCGCGCCTTCTCAGTGGCCAGCGTGATGAAACCAGCACGTCTCCGTGGATGTGATTGGGAACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR TCA 90 bp GAGGGAATGCTGGGAGTAGTAGGCATGAAAGACTGGTTACTGGGCTaGAAGCTAGATCGCCACTTCCCAGCCACAATTTGTCAATCCAGA +
Preference number: 1 (lower is better)
Translates to: EGMLGVVGMKDWLLG*KLDRHFPATICQSR
Trigger: TCTGGATTGACAAATTGTGGCTGGGAAGTGGCGATCTAGCTTTCAGCCCAGTAACCAGTCTTTCATGCCTACTACTCCCAGCATTCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR CCA 90 bp AAGAGGAGAAACAGAACAACATCAACAGCCTTTCGAGGTAAACTGTaGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTG +
Preference number: 1 (lower is better)
Translates to: KRRNRTTSTAFRGKL*ARIYLGNPQGPKSL
Trigger: CAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCACAGTTTACCTCGAAAGGCTGTTGATGTTGTTCTGTTTCTCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR TCA 90 bp CTTTATAAGCAAGGTCAGACAGAAAAGAACTTCCGTAAAAATGGCTaGGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCC +
Preference number: 1 (lower is better)
Translates to: LYKQGQTEKNFRKNG*GLSQRLKCDPVTIS
Trigger: GGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAGCCATTTTTACGGAAGTTCTTTTCTGTCTGACCTTGCTTATAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR TCA 90 bp CCTAATTGCCTAACGCTGATGTCATGGTGTACGCAAAATCAACATTaGTCTCTAAGTGAAAGAGGAGAAACAGAACAACATCAACAGCCT +
Preference number: 1 (lower is better)
Translates to: PNCLTLMSWCTQNQH*SLSERGETEQHQQP
Trigger: AGGCTGTTGATGTTGTTCTGTTTCTCCTCTTTCACTTAGAGATCAATGTTGATTTTGCGTACACCATGACATCAGCGTTAGGCAATTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR TCA 90 bp CAGCGGTCCTCAGAAGAGACAATTTTGATTAATATCAGACCCATCTaGCTCAGTCTATTAAACCCTGAAGGAAGGATACTCTTCAGATAT +
Preference number: 1 (lower is better)
Translates to: QRSSEETILINIRPI*LSLLNPEGRILFRY
Trigger: ATATCTGAAGAGTATCCTTCCTTCAGGGTTTAATAGACTGAGTCAGATGGGTCTGATATTAATCAAAATTGTCTCTTCTGAGGACCGCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR TCA 90 bp AACGCTGATGTCATGGTGTACGCAAAATCAACATTGATCTCTAAGTaGAAGAGGAGAAACAGAACAACATCAACAGCCTTTCGAGGTAAA +
Preference number: 1 (lower is better)
Translates to: NADVMVYAKSTLISK*KRRNRTTSTAFRGK
Trigger: TTTACCTCGAAAGGCTGTTGATGTTGTTCTGTTTCTCCTCTTTCACTTAGAGATCAATGTTGATTTTGCGTACACCATGACATCAGCGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR CCA 90 bp TTACTGTTTTCTTACCAGCTCACTGTCTGTACACATTTCAAAGCGTaGTTGGTGTTAGACTGCTGCGTAAACATCAATAAAATCCCAAGT +
Preference number: 1 (lower is better)
Translates to: LLFSYQLTVCTHFKA*LVLDCCVNINKIPS
Trigger: ACTTGGGATTTTATTGATGTTTACGCAGCAGTCTAACACCAACCACGCTTTGAAATGTGTACAGACAGTGAGCTGGTAAGAAAACAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR CCA 90 bp CGCCGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGGGCAGAGGGAGTGACTaGTCTTGCGCTAGCCACTGG +
Preference number: 2 (lower is better)
Translates to: RRTAGVRRRDVRPMAGGVGRGSD*SCASHW
Trigger: CCAGTGGCTAGCGCAAGACCAGTCACTCCCTCTGCC...CACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR CCA 90 bp GGAAATCTGTTAGAAACAGCCTCCTCGAGGGAGCCCTCCCCCTGGCACTGCCCCGAACAGCAGGTCCTCTaGCTGCAGAGTGACCGCCGC +
Preference number: 2 (lower is better)
Translates to: GNLLETASSREPSPWHCPEQQVL*LQSDRR
Trigger: GCGGCGGTCACTCTGCAGCCAGAGGACCTGCTGTTC...GGGGCAGTGCCAGGGGGAGGGCTCCCTCGAGGAGGCTGTTTCTAACAGATTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR TCA 90 bp CTGTCCTGGTACCACGGCTGGTCAGGCCTCTTCACTGTGTGGACAGACACGTGGATCCCCAGGTGCTCATaGCCGCTTCTCAGCTCGCCC +
Preference number: 2 (lower is better)
Translates to: LSWYHGWSGLFTVWTDTWIPRCS*PLLSSP
Trigger: GGGCGAGCTGAGAAGCGGTCATGAGCACCTGGGGAT...CCACGTGTCTGTCCACACAGTGAAGAGGCCTGACCAGCCGTGGTACCAGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR GCA 90 bp CGCCGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGGAGCGTATTTTCCTTTaGCTACCGATGGGTTCTGAG +
Preference number: 2 (lower is better)
Translates to: RRTAGVRRRDVRPMAGGVERIFL*LPMGSE
Trigger: CTCAGAACCCATCGGTAGGCAAAGGAAAATACGCTC...CACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR GCA 90 bp CGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGGGGACGGCAAGTCAATaGTTATCAGCGGTCCTCAGA +
Preference number: 2 (lower is better)
Translates to: RTAGVRRRDVRPMAGGVLGTASQ*LSAVLR
Trigger: TCTGAGGACCGCTGATAAGCATTGACTTGCCGTCCC...CAACACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR GCA 90 bp GGAAATCTGTTAGAAACAGCCTCCTCGAGGGAGCCCTCCCCCTGGCACTGCCCCTCCGCAGGCGGCATGTaGAGTGATGAACAGCAGGTC +
Preference number: 2 (lower is better)
Translates to: GNLLETASSREPSPWHCPSAGGM*SDEQQV
Trigger: GACCTGCTGTTCATCACTGCACATGCCGCCTGCGGA...GGGGCAGTGCCAGGGGGAGGGCTCCCTCGAGGAGGCTGTTTCTAACAGATTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR CCA 90 bp GGAAATCTGTTAGAAACAGCCTCCTCGAGGGAGCCCTCCCCCTGGCACTGCCCCGGTGTCAGCGTTCCCTaGACACGTCCTGTCCTGGTA +
Preference number: 2 (lower is better)
Translates to: GNLLETASSREPSPWHCPGVSVP*TRPVLV
Trigger: TACCAGGACAGGACGTGTCCAGGGAACGCTGACACC...GGGGCAGTGCCAGGGGGAGGGCTCCCTCGAGGAGGCTGTTTCTAACAGATTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR TCA 90 bp AAATGGCTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGCCTCTGGCTGCAGAGTaGCCGCCGCACTGCCGGGGT +
Preference number: 2 (lower is better)
Translates to: KWLRPQSETEMRPSYHLLPLAAE*PPHCRG
Trigger: ACCCCGGCAGTGCGGCGGTCACTCTGCAGCCAGAGG...CAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAGCCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR GCA 90 bp CGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGGAAGAAGGATCTCCATaGCTTGGACTAATCTTCGGG +
Preference number: 2 (lower is better)
Translates to: RTAGVRRRDVRPMAGGVLEEGSP*LGLIFG
Trigger: CCCGAAGATTAGTCCAAGGCATGGAGATCCTTCTTC...CAACACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR TCA 90 bp CGCCGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGAATATCAGACCCATCTaGCTCAGTCTATTAAACCCT +
Preference number: 2 (lower is better)
Translates to: RRTAGVRRRDVRPMAGGVNIRPI*LSLLNP
Trigger: AGGGTTTAATAGACTGAGTCAGATGGGTCTGATATT...CACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR GCA 90 bp GGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGCAGCCACCGGATAGATAATGGGAGTGACTGGTCTTaGGCTAGCCACTGGCTGACT +
Preference number: 2 (lower is better)
Translates to: GEMCGQWQAVCCSHRIDNGSDWS*ASHWLT
Trigger: AGTCAGCCAGTGGCTAGCGCAAGACCAGTCACTCCC...ATTATCTATCCGGTGGCTGCAACACACCGCCTGCCATTGGCCGCACATCTCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR GCA 90 bp GGAAATCTGTTAGAAACAGCCTCCTCGAGGGAGCCCTCCCCCTGGCACTGCCCCGGGACGGCAAGTCAATaGTTATCAGCGGTCCTCAGA +
Preference number: 2 (lower is better)
Translates to: GNLLETASSREPSPWHCPGTASQ*LSAVLR
Trigger: TCTGAGGACCGCTGATAAGCATTGACTTGCCGTCCC...GGGGCAGTGCCAGGGGGAGGGCTCCCTCGAGGAGGCTGTTTCTAACAGATTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR CCA 90 bp CTGTCCTGGTACCACGGCTGGTCAGGCCTCTTCACTGTGTGGACAGACACGTGGTCCTTTGCCTACCGATaGGTTCTGAGATGCGCACGA +
Preference number: 2 (lower is better)
Translates to: LSWYHGWSGLFTVWTDTWSFAYR*VLRCAR
Trigger: TCGTGCGCATCTCAGAACCCATCGGTAGGCAAAGGA...CCACGTGTCTGTCCACACAGTGAAGAGGCCTGACCAGCCGTGGTACCAGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR TCA 90 bp CGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGAGTGTTTTCATGCTTTaGAAGATGCATTTCAGGGCT +
Preference number: 2 (lower is better)
Translates to: RTAGVRRRDVRPMAGGVLSVFML*KMHFRA
Trigger: AGCCCTGAAATGCATCTTTCAAAGCATGAAAACACT...CAACACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR GCA 90 bp AAATGGCTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGTACGACGGCGAGATGTaGGGCCAATGGCAGGCGGTG +
Preference number: 2 (lower is better)
Translates to: KWLRPQSETEMRPSYHLLYDGEM*GQWQAV
Trigger: CACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTA...CAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAGCCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR GCA 90 bp AAATGGCTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGAGCAGGTCCTCTGGCTaGAGAGTGACCGCCGCACTG +
Preference number: 2 (lower is better)
Translates to: KWLRPQSETEMRPSYHLLSRSSG*RVTAAL
Trigger: CAGTGCGGCGGTCACTCTGCAGCCAGAGGACCTGCT...CAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAGCCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR TCA 90 bp TGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAAGCCCAATCCCCAGGTGCTCATaGCCGCTTCTCAGCTCGCCC +
Preference number: 2 (lower is better)
Translates to: WARIYLGNPQGPKSLKSPIPRCS*PLLSSP
Trigger: GGGCGAGCTGAGAAGCGGTCATGAGCACCTGGGGAT...TGGGCTTTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR GCA 90 bp CGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGAAATCGATTCCATTCTaGCTATTTGCAAACTTCTGC +
Preference number: 2 (lower is better)
Translates to: RTAGVRRRDVRPMAGGVLKSIPF*LFANFC
Trigger: GCAGAAGTTTGCAAATAGGCAGAATGGAATCGATTT...CAACACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR CCA 90 bp AAATGGCTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGGGCAGAGGGAGTGACTaGTCTTGCGCTAGCCACTGG +
Preference number: 2 (lower is better)
Translates to: KWLRPQSETEMRPSYHLLGRGSD*SCASHW
Trigger: CCAGTGGCTAGCGCAAGACCAGTCACTCCCTCTGCC...CAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAGCCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR CCA 90 bp TGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAAGCCCAGAACAGCAGGTCCTCTaGCTGCAGAGTGACCGCCGC +
Preference number: 2 (lower is better)
Translates to: WARIYLGNPQGPKSLKSPEQQVL*LQSDRR
Trigger: GCGGCGGTCACTCTGCAGCCAGAGGACCTGCTGTTC...TGGGCTTTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR GCA 90 bp CTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGAGACTAGGGAGTGACTGGTCTTaGGCTAGCCACTGGCTGACT +
Preference number: 2 (lower is better)
Translates to: LRPQSETEMRPSYHLLRLGSDWS*ASHWLT
Trigger: AGTCAGCCAGTGGCTAGCGCAAGACCAGTCACTCCC...TAGTCTCAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR CCA 90 bp AGCCGCTCGGATTTCCTTAGGGGACGGCAAGTCAATGCTTATCAGCGGTCCTCATCCTTTGCCTACCGATaGGTTCTGAGATGCGCACGA +
Preference number: 2 (lower is better)
Translates to: SRSDFLRGRQVNAYQRSSSFAYR*VLRCAR
Trigger: TCGTGCGCATCTCAGAACCCATCGGTAGGCAAAGGA...TGAGGACCGCTGATAAGCATTGACTTGCCGTCCCCTAAGGAAATCCGAGCGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR CCA 90 bp GGTTCCCAATCACATCCACGGAGACGTGCTGGTTTCATCACGCTGGCCACTGAGGGGGGTGGTCACCACTaGAGAAGCAAAAACCTAGTT +
Preference number: 2 (lower is better)
Translates to: GSQSHPRRRAGFITLATEGGGHH*RSKNLV
Trigger: AACTAGGTTTTTGCTTCTCCAGTGGTGACCACCCCC...CTCAGTGGCCAGCGTGATGAAACCAGCACGTCTCCGTGGATGTGATTGGGAACC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR CCA 90 bp AGACAGACAGGACACCATCACTCCCCATATCCAAAAGCCTCCGCAGGCGGCATGGGGGGTGGTCACCACTaGAGAAGCAAAAACCTAGTT +
Preference number: 2 (lower is better)
Translates to: RQTGHHHSPYPKASAGGMGGGHH*RSKNLV
Trigger: AACTAGGTTTTTGCTTCTCCAGTGGTGACCACCCCC...CATGCCGCCTGCGGAGGCTTTTGGATATGGGGAGTGATGGTGTCCTGTCTGTCT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR TCA 90 bp AAACTGTGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAGCGCTAGCCACTGGCTaGCTCCGTAGGCCTGACACA +
Preference number: 2 (lower is better)
Translates to: KLWARIYLGNPQGPKSLKALATG*LRRPDT
Trigger: TGTGTCAGGCCTACGGAGTCAGCCAGTGGCTAGCGC...TTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCACAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR GCA 90 bp AGACAGACAGGACACCATCACTCCCCATATCCAAAAGCCTCCGCAGGCGGCATGCTATTTGCAAACTTCTaGCCGATTGGCACTGCTCCT +
Preference number: 2 (lower is better)
Translates to: RQTGHHHSPYPKASAGGMLFANF*PIGTAP
Trigger: AGGAGCAGTGCCAATCGGGCAGAAGTTTGCAAATAG...CATGCCGCCTGCGGAGGCTTTTGGATATGGGGAGTGATGGTGTCCTGTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR TCA 90 bp CTGTCCTGGTACCACGGCTGGTCAGGCCTCTTCACTGTGTGGACAGACACGTGGAGTGTTTTCATGCTTTaGAAGATGCATTTCAGGGCT +
Preference number: 2 (lower is better)
Translates to: LSWYHGWSGLFTVWTDTWSVFML*KMHFRA
Trigger: AGCCCTGAAATGCATCTTTCAAAGCATGAAAACACT...CCACGTGTCTGTCCACACAGTGAAGAGGCCTGACCAGCCGTGGTACCAGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR GCA 90 bp GGTTCCCAATCACATCCACGGAGACGTGCTGGTTTCATCACGCTGGCCACTGAGTCCATTCTGCCTATTTaGAAACTTCTGCCCGATTGG +
Preference number: 2 (lower is better)
Translates to: GSQSHPRRRAGFITLATESILPI*KLLPDW
Trigger: CCAATCGGGCAGAAGTTTGCAAATAGGCAGAATGGA...CTCAGTGGCCAGCGTGATGAAACCAGCACGTCTCCGTGGATGTGATTGGGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR GCA 90 bp CTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGAGACTATGGCAGGCGGTGTGTTaGAGCCACCGGATAGATAAT +
Preference number: 2 (lower is better)
Translates to: LRPQSETEMRPSYHLLRLWQAVC*SHRIDN
Trigger: ATTATCTATCCGGTGGCTGCAACACACCGCCTGCCA...TAGTCTCAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR CCA 90 bp GGTTCCCAATCACATCCACGGAGACGTGCTGGTTTCATCACGCTGGCCACTGAGACACATTTCAAAGCGTaGTTGGTGTTAGACTGCTGC +
Preference number: 2 (lower is better)
Translates to: GSQSHPRRRAGFITLATETHFKA*LVLDCC
Trigger: GCAGCAGTCTAACACCAACCACGCTTTGAAATGTGT...CTCAGTGGCCAGCGTGATGAAACCAGCACGTCTCCGTGGATGTGATTGGGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR TCA 90 bp AGACAGACAGGACACCATCACTCCCCATATCCAAAAGCCTCCGCAGGCGGCATGCAGTCTATTAAACCCTaGAGGAAGGATACTCTTCAG +
Preference number: 2 (lower is better)
Translates to: RQTGHHHSPYPKASAGGMQSIKP*RKDTLQ
Trigger: CTGAAGAGTATCCTTCCTTCAGGGTTTAATAGACTG...CATGCCGCCTGCGGAGGCTTTTGGATATGGGGAGTGATGGTGTCCTGTCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR TCA 90 bp TGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAAGCCCACGAGCATGCTTTTGCTaGCTGAAAGGCCCACTAGCA +
Preference number: 2 (lower is better)
Translates to: WARIYLGNPQGPKSLKSPRACFC*LKGPLA
Trigger: TGCTAGTGGGCCTTTCAGTCAGCAAAAGCATGCTCG...TGGGCTTTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR GCA 90 bp AGCCGCTCGGATTTCCTTAGGGGACGGCAAGTCAATGCTTATCAGCGGTCCTCATCCATTCTGCCTATTTaGAAACTTCTGCCCGATTGG +
Preference number: 2 (lower is better)
Translates to: SRSDFLRGRQVNAYQRSSSILPI*KLLPDW
Trigger: CCAATCGGGCAGAAGTTTGCAAATAGGCAGAATGGA...TGAGGACCGCTGATAAGCATTGACTTGCCGTCCCCTAAGGAAATCCGAGCGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR GCA 90 bp TGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAAGCCCATGGCAGGCGGTGTGTTaGAGCCACCGGATAGATAAT +
Preference number: 2 (lower is better)
Translates to: WARIYLGNPQGPKSLKSPWQAVC*SHRIDN
Trigger: ATTATCTATCCGGTGGCTGCAACACACCGCCTGCCA...TGGGCTTTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR CCA 90 bp AAACTGTGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAATCCACGGAGACGTGCTaGTTTCATCACGCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: KLWARIYLGNPQGPKSLKSTETC*FHHAGH
Trigger: GTGGCCAGCGTGATGAAACCAGCACGTCTCCGTGGA...TTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCACAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR TCA 90 bp CTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGAGACTATACACCACAACCACCTaGGCGTATTTTCCTTTGCCT +
Preference number: 2 (lower is better)
Translates to: LRPQSETEMRPSYHLLRLYTTTT*AYFPLP
Trigger: AGGCAAAGGAAAATACGCTCAGGTGGTTGTGGTGTA...TAGTCTCAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR TCA 90 bp TGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAAGCCCATTCCGTAAAAATGGCTaGGGCCTCAGTCAGAGACTG +
Preference number: 2 (lower is better)
Translates to: WARIYLGNPQGPKSLKSPFRKNG*GLSQRL
Trigger: CAGTCTCTGACTGAGGCCTCAGCCATTTTTACGGAA...TGGGCTTTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR TCA 90 bp AAACTGTGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAGCCTCAGTCAGAGACTaGAATGCGACCCAGTTACCA +
Preference number: 2 (lower is better)
Translates to: KLWARIYLGNPQGPKSLKASVRD*NATQLP
Trigger: TGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGC...TTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCACAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR TCA 90 bp AAACTGTGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAGACTGGTTACTGGGCTaGAAGCTAGATCGCCACTTC +
Preference number: 2 (lower is better)
Translates to: KLWARIYLGNPQGPKSLKDWLLG*KLDRHF
Trigger: GAAGTGGCGATCTAGCTTTCAGCCCAGTAACCAGTC...TTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCACAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR GCA 90 bp TGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAAGCCCAGAGCGTATTTTCCTTTaGCTACCGATGGGTTCTGAG +
Preference number: 2 (lower is better)
Translates to: WARIYLGNPQGPKSLKSPERIFL*LPMGSE
Trigger: CTCAGAACCCATCGGTAGGCAAAGGAAAATACGCTC...TGGGCTTTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR GCA 90 bp GGTTCCCAATCACATCCACGGAGACGTGCTGGTTTCATCACGCTGGCCACTGAGTTGGTGTTAGACTGCTaGGTAAACATCAATAAAATC +
Preference number: 2 (lower is better)
Translates to: GSQSHPRRRAGFITLATELVLDC*VNINKI
Trigger: GATTTTATTGATGTTTACGCAGCAGTCTAACACCAA...CTCAGTGGCCAGCGTGATGAAACCAGCACGTCTCCGTGGATGTGATTGGGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR GCA 90 bp AAATGGCTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGTGGTTGGTGTTAGACTaGTGCGTAAACATCAATAAA +
Preference number: 2 (lower is better)
Translates to: KWLRPQSETEMRPSYHLLWLVLD*CVNINK
Trigger: TTTATTGATGTTTACGCAGCAGTCTAACACCAACCA...CAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAGCCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR CAA 90 bp CTAGATCGCCACTTCCCAGCCACAATTTGTCAATCCAGAAGAGGGTaGAAGACTGTAATTTTCTCGTCGATGCTTTATAAGCAAGGTCAG +
Preference number: 2 (lower is better)
Translates to: LDRHFPATICQSRRG*KTVIFSSMLYKQGQ
Trigger: CTGACCTTGCTTATAAAGCATCGACGAGAAAATTACAGTCTTCAACCCTCTTCTGGATTGACAAATTGTGGCTGGGAAGTGGCGATCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR GCA 90 bp TGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAAGCCCAAAATCGATTCCATTCTaGCTATTTGCAAACTTCTGC +
Preference number: 2 (lower is better)
Translates to: WARIYLGNPQGPKSLKSPKSIPF*LFANFC
Trigger: GCAGAAGTTTGCAAATAGGCAGAATGGAATCGATTT...TGGGCTTTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR GCA 90 bp TGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAAGCCCAATCATTCTACCCTATTaGCATTCCAAGCATTACCAA +
Preference number: 2 (lower is better)
Translates to: WARIYLGNPQGPKSLKSPIILPY*HSKHYQ
Trigger: TTGGTAATGCTTGGAATGGCAATAGGGTAGAATGAT...TGGGCTTTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR GCA 90 bp ACTGAAAGGCCCACTAGCATAATTACTGTTTTCTTACCAGCTCACTGTCTGTACGAAGAAGGATCTCCATaGCTTGGACTAATCTTCGGG +
Preference number: 2 (lower is better)
Translates to: TERPTSIITVFLPAHCLYEEGSP*LGLIFG
Trigger: CCCGAAGATTAGTCCAAGGCATGGAGATCCTTCTTC...GTACAGACAGTGAGCTGGTAAGAAAACAGTAATTATGCTAGTGGGCCTTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR CCA 90 bp ACTGAAAGGCCCACTAGCATAATTACTGTTTTCTTACCAGCTCACTGTCTGTACATCGTCACACGGAGGTaGGAGGAAATCGATTCCATT +
Preference number: 2 (lower is better)
Translates to: TERPTSIITVFLPAHCLYIVTRR*EEIDSI
Trigger: AATGGAATCGATTTCCTCCCACCTCCGTGTGACGAT...GTACAGACAGTGAGCTGGTAAGAAAACAGTAATTATGCTAGTGGGCCTTTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR TCA 90 bp AAACTGTGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAAATATCAGACCCATCTaGCTCAGTCTATTAAACCCT +
Preference number: 2 (lower is better)
Translates to: KLWARIYLGNPQGPKSLKNIRPI*LSLLNP
Trigger: AGGGTTTAATAGACTGAGTCAGATGGGTCTGATATT...TTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCACAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR CCA 90 bp ACTGAAAGGCCCACTAGCATAATTACTGTTTTCTTACCAGCTCACTGTCTGTACAGGATCTCCATGCCTTaGACTAATCTTCGGGTTTAT +
Preference number: 2 (lower is better)
Translates to: TERPTSIITVFLPAHCLYRISMP*TNLRVY
Trigger: ATAAACCCGAAGATTAGTCCAAGGCATGGAGATCCT...GTACAGACAGTGAGCTGGTAAGAAAACAGTAATTATGCTAGTGGGCCTTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR GCA 72 bp GTGACCGCCGCACTGCCGGGGTACGACGGCGAGATGTaGGGCCAATGGCAGGCGGTGTGTTGCAGCCACCGG +
Preference number: 3 (lower is better)
Translates to: VTAALPGYDGEM*GQWQAVCCSHR
Trigger: CCGGTGGCTGCAACACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCGGCGGTCAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR CCA 72 bp GCCTCCTCGAGGGAGCCCTCCCCCTGGCACTGCCCCTaGGTTCCCAATCACATCCACGGAGACGTGCTGGTT +
Preference number: 3 (lower is better)
Translates to: ASSREPSPWHCP*VPNHIHGDVLV
Trigger: AACCAGCACGTCTCCGTGGATGTGATTGGGAACCCAGGGGCAGTGCCAGGGGGAGGGCTCCCTCGAGGAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR CAA 90 bp CGCCGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGCATTTCAAAGCGTGGTaGGTGTTAGACTGCTGCGTA +
Preference number: 3 (lower is better)
Translates to: RRTAGVRRRDVRPMAGGVHFKAW*VLDCCV
Trigger: TACGCAGCAGTCTAACACCAACCACGCTTTGAAATG...CACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR TCA 72 bp TCCACGGAGACGTGCTGGTTTCATCACGCTGGCCACTaGGAAGGCGCGAGGACAGGTGTCAGCGTTCCCTGG +
Preference number: 3 (lower is better)
Translates to: STETCWFHHAGH*EGARTGVSVPW
Trigger: CCAGGGAACGCTGACACCTGTCCTCGCGCCTTCTCAGTGGCCAGCGTGATGAAACCAGCACGTCTCCGTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR CCA 72 bp GCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATaGCAGGCGGTGTGTTGCAGCCACCGGATAGATAAT +
Preference number: 3 (lower is better)
Translates to: ALPGYDGEMCGQ*QAVCCSHRIDN
Trigger: ATTATCTATCCGGTGGCTGCAACACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR CCA 72 bp GCGTTCCCTGGACACGTCCTGTCCTGGTACCACGGCTaGTCAGGCCTCTTCACTGTGTGGACAGACACGTGG +
Preference number: 3 (lower is better)
Translates to: AFPGHVLSWYHG*SGLFTVWTDTW
Trigger: CCACGTGTCTGTCCACACAGTGAAGAGGCCTGACCAGCCGTGGTACCAGGACAGGACGTGTCCAGGGAACGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR TCA 72 bp GCAGAGGGAGTGACTGGTCTTGCGCTAGCCACTGGCTaGCTCCGTAGGCCTGACACAGTCTACACCACAACC +
Preference number: 3 (lower is better)
Translates to: AEGVTGLALATG*LRRPDTVYTTT
Trigger: GGTTGTGGTGTAGACTGTGTCAGGCCTACGGAGTCAGCCAGTGGCTAGCGCAAGACCAGTCACTCCCTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR CCA 72 bp AATCACATCCACGGAGACGTGCTGGTTTCATCACGCTaGCCACTGAGAAGGCGCGAGGACAGGTGTCAGCGT +
Preference number: 3 (lower is better)
Translates to: NHIHGDVLVSSR*PLRRREDRCQR
Trigger: ACGCTGACACCTGTCCTCGCGCCTTCTCAGTGGCCAGCGTGATGAAACCAGCACGTCTCCGTGGATGTGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR GCA 72 bp CAGTCTACACCACAACCACCTGAGCGTATTTTCCTTTaGCTACCGATGGGTTCTGAGATGCGCACGAGGGGG +
Preference number: 3 (lower is better)
Translates to: QSTPQPPERIFL*LPMGSEMRTRG
Trigger: CCCCCTCGTGCGCATCTCAGAACCCATCGGTAGGCAAAGGAAAATACGCTCAGGTGGTTGTGGTGTAGACTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR CAA 90 bp GGTTCCCAATCACATCCACGGAGACGTGCTGGTTTCATCACGCTGGCCACTGAGTTCCATTCTGCCTATTaGCAAACTTCTGCCCGATTG +
Preference number: 3 (lower is better)
Translates to: GSQSHPRRRAGFITLATEFHSAY*QTSARL
Trigger: CAATCGGGCAGAAGTTTGCAAATAGGCAGAATGGAA...CTCAGTGGCCAGCGTGATGAAACCAGCACGTCTCCGTGGATGTGATTGGGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR GCA 72 bp TCGTCACACGGAGGTGGGAGGAAATCGATTCCATTCTaGCTATTTGCAAACTTCTGCCCGATTGGCACTGCT +
Preference number: 3 (lower is better)
Translates to: SSHGGGRKSIPF*LFANFCPIGTA
Trigger: AGCAGTGCCAATCGGGCAGAAGTTTGCAAATAGGCAGAATGGAATCGATTTCCTCCCACCTCCGTGTGACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR TCA 72 bp CTGGGAGTAGTAGGCATGAAAGACTGGTTACTGGGCTaGAAGCTAGATCGCCACTTCCCAGCCACAATTTGT +
Preference number: 3 (lower is better)
Translates to: LGVVGMKDWLLG*KLDRHFPATIC
Trigger: ACAAATTGTGGCTGGGAAGTGGCGATCTAGCTTTCAGCCCAGTAACCAGTCTTTCATGCCTACTACTCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR CAA 90 bp AAATGGCTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGTTCCATTCTGCCTATTaGCAAACTTCTGCCCGATTG +
Preference number: 3 (lower is better)
Translates to: KWLRPQSETEMRPSYHLLFHSAY*QTSARL
Trigger: CAATCGGGCAGAAGTTTGCAAATAGGCAGAATGGAA...CAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAGCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR TCA 72 bp ACTTCCGTAAAAATGGCTGAGGCCTCAGTCAGAGACTaGAATGCGACCCAGTTACCATCTCCTGAGACTAGA +
Preference number: 3 (lower is better)
Translates to: TSVKMAEASVRD*NATQLPSPETR
Trigger: TCTAGTCTCAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAGCCATTTTTACGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR CCA 72 bp AACAGAACAACATCAACAGCCTTTCGAGGTAAACTGTaGGCCAGAATCTATTTAGGCAACCCGCAGGGACCA +
Preference number: 3 (lower is better)
Translates to: NRTTSTAFRGKL*ARIYLGNPQGP
Trigger: TGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCACAGTTTACCTCGAAAGGCTGTTGATGTTGTTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR CAA 90 bp CTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGAGACTAAATCATTCTACCCTATaGCCATTCCAAGCATTACCA +
Preference number: 3 (lower is better)
Translates to: LRPQSETEMRPSYHLLRLNHSTL*PFQALP
Trigger: TGGTAATGCTTGGAATGGCAATAGGGTAGAATGATT...TAGTCTCAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR-3UTR CAA 90 bp AAATGGCTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGAATCATTCTACCCTATaGCCATTCCAAGCATTACCA +
Preference number: 3 (lower is better)
Translates to: KWLRPQSETEMRPSYHLLNHSTL*PFQALP
Trigger: TGGTAATGCTTGGAATGGCAATAGGGTAGAATGATT...CAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAGCCATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR CCA 72 bp GGGCTGCAAACACTAGGAAGAAGGATCTCCATGCCTTaGACTAATCTTCGGGTTTATAATGAGTTAACATCC +
Preference number: 3 (lower is better)
Translates to: GLQTLGRRISMP*TNLRVYNELTS
Trigger: GGATGTTAACTCATTATAAACCCGAAGATTAGTCCAAGGCATGGAGATCCTTCTTCCTAGTGTTTGCAGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR CCA 72 bp TCTTACCAGCTCACTGTCTGTACACATTTCAAAGCGTaGTTGGTGTTAGACTGCTGCGTAAACATCAATAAA +
Preference number: 3 (lower is better)
Translates to: SYQLTVCTHFKA*LVLDCCVNINK
Trigger: TTTATTGATGTTTACGCAGCAGTCTAACACCAACCACGCTTTGAAATGTGTACAGACAGTGAGCTGGTAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR TCA 72 bp GTCATGGTGTACGCAAAATCAACATTGATCTCTAAGTaGAAGAGGAGAAACAGAACAACATCAACAGCCTTT +
Preference number: 3 (lower is better)
Translates to: VMVYAKSTLISK*KRRNRTTSTAF
Trigger: AAAGGCTGTTGATGTTGTTCTGTTTCTCCTCTTTCACTTAGAGATCAATGTTGATTTTGCGTACACCATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR TCA 72 bp CTAACGCTGATGTCATGGTGTACGCAAAATCAACATTaGTCTCTAAGTGAAAGAGGAGAAACAGAACAACAT +
Preference number: 3 (lower is better)
Translates to: LTLMSWCTQNQH*SLSERGETEQH
Trigger: ATGTTGTTCTGTTTCTCCTCTTTCACTTAGAGATCAATGTTGATTTTGCGTACACCATGACATCAGCGTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp CGCCGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGCCTCTGGCTGCAGAGTaGCCGCCGCACTGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: RRTAGVRRRDVRPMAGGVPLAAE*PPHCRG
Trigger: ACCCCGGCAGTGCGGCGGTCACTCTGCAGCCAGAGG...CACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp CGCCGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTCCCCCAGAAGTGTGTaGCAGGCTGGGACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RRTAGVRRRDVRPMAGGVSPRSV*QAGTCS
Trigger: GCTGCAGGTCCCAGCCTGTCACACACTTCTGGGGGA...CACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR CCA 90 bp CGCCGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGCCCTGGCACTGCCCCTaGGTTCCCAATCACATCCAC +
Preference number: 4 (lower is better)
Translates to: RRTAGVRRRDVRPMAGGVPWHCP*VPNHIH
Trigger: GTGGATGTGATTGGGAACCCAGGGGCAGTGCCAGGG...CACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCGGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp CTGTCCTGGTACCACGGCTGGTCAGGCCTCTTCACTGTGTGGACAGACACGTGGGGGCCTGCTGCTTGCTaGTGGGCTGGCTGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: LSWYHGWSGLFTVWTDTWGPAAC*WAGCWR
Trigger: GCGCCAGCAGCCAGCCCAGCAGCAAGCAGCAGGCCC...CCACGTGTCTGTCCACACAGTGAAGAGGCCTGACCAGCCGTGGTACCAGGACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR CCA 90 bp CGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGGGCAGAGGGAGTGACTaGTCTTGCGCTAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: RTAGVRRRDVRPMAGGVLGRGSD*SCASHW
Trigger: CCAGTGGCTAGCGCAAGACCAGTCACTCCCTCTGCC...CAACACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp CGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGCCCTGGCACTGCCCCTaGGTTCCCAATCACATCCAC +
Preference number: 4 (lower is better)
Translates to: RTAGVRRRDVRPMAGGVLPWHCP*VPNHIH
Trigger: GTGGATGTGATTGGGAACCCAGGGGCAGTGCCAGGG...CAACACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp CGCCGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGGACTGGTTACTGGGCTaGAAGCTAGATCGCCACTTC +
Preference number: 4 (lower is better)
Translates to: RRTAGVRRRDVRPMAGGVDWLLG*KLDRHF
Trigger: GAAGTGGCGATCTAGCTTTCAGCCCAGTAACCAGTC...CACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp CGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGCTGGTTTCATCACGCTaGCCACTGAGAAGGCGCGAG +
Preference number: 4 (lower is better)
Translates to: RTAGVRRRDVRPMAGGVLLVSSR*PLRRRE
Trigger: CTCGCGCCTTCTCAGTGGCCAGCGTGATGAAACCAG...CAACACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp CGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGTCCACGGAGACGTGCTaGTTTCATCACGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: RTAGVRRRDVRPMAGGVLSTETC*FHHAGH
Trigger: GTGGCCAGCGTGATGAAACCAGCACGTCTCCGTGGA...CAACACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp GGAAATCTGTTAGAAACAGCCTCCTCGAGGGAGCCCTCCCCCTGGCACTGCCCCATCCCCAGGTGCTCATaGCCGCTTCTCAGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: GNLLETASSREPSPWHCPIPRCS*PLLSSP
Trigger: GGGCGAGCTGAGAAGCGGTCATGAGCACCTGGGGAT...GGGGCAGTGCCAGGGGGAGGGCTCCCTCGAGGAGGCTGTTTCTAACAGATTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp CGCCGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTCCGTAAAAATGGCTaGGGCCTCAGTCAGAGACTG +
Preference number: 4 (lower is better)
Translates to: RRTAGVRRRDVRPMAGGVFRKNG*GLSQRL
Trigger: CAGTCTCTGACTGAGGCCTCAGCCATTTTTACGGAA...CACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp GGAAATCTGTTAGAAACAGCCTCCTCGAGGGAGCCCTCCCCCTGGCACTGCCCCGGACACGTCCTGTCCTaGTACCACGGCTGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: GNLLETASSREPSPWHCPGHVLS*YHGWSG
Trigger: GCCTGACCAGCCGTGGTACCAGGACAGGACGTGTCC...GGGGCAGTGCCAGGGGGAGGGCTCCCTCGAGGAGGCTGTTTCTAACAGATTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp CGCCGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTTACCTTGTCGCCTTaGCCCAGGTTCTCGGATTTG +
Preference number: 4 (lower is better)
Translates to: RRTAGVRRRDVRPMAGGVFTLSP*PRFSDL
Trigger: CAAATCCGAGAACCTGGGCCAAGGCGACAAGGTAAA...CACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574049.1
CDS-3UTR TCA 90 bp CGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGCGCAATGATAGTGCTTaGAGACAGCACGGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: RTAGVRRRDVRPMAGGVLRNDSA*RQHGEA
Trigger: AGCCTCTCCGTGCTGTCTTCAAGCACTATCATTGCG...CAACACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp CGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGTTCTTATTGCAGTCCTaGGTCGGGCAGGCTTGGTAC +
Preference number: 4 (lower is better)
Translates to: RTAGVRRRDVRPMAGGVLFLLQS*VGQAWY
Trigger: GTACCAAGCCTGCCCGACTCAGGACTGCAATAAGAA...CAACACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR GCA 90 bp GGTTCCCAATCACATCCACGGAGACGTGCTGGTTTCATCACGCTGGCCACTGAGCTGGGGCCTGCTGCTTaGTGCTGGGCTGGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GSQSHPRRRAGFITLATELGPAA*CWAGCW
Trigger: CCAGCAGCCAGCCCAGCAGCAAGCAGCAGGCCCCAG...CTCAGTGGCCAGCGTGATGAAACCAGCACGTCTCCGTGGATGTGATTGGGAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR GCA 90 bp CTGTCCTGGTACCACGGCTGGTCAGGCCTCTTCACTGTGTGGACAGACACGTGGAGCAGGTCCTCTGGCTaGAGAGTGACCGCCGCACTG +
Preference number: 4 (lower is better)
Translates to: LSWYHGWSGLFTVWTDTWSRSSG*RVTAAL
Trigger: CAGTGCGGCGGTCACTCTGCAGCCAGAGGACCTGCT...CCACGTGTCTGTCCACACAGTGAAGAGGCCTGACCAGCCGTGGTACCAGGACAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp GGTTCCCAATCACATCCACGGAGACGTGCTGGTTTCATCACGCTGGCCACTGAGGCCCCCTCGCTCAGTTaGCCGACCATGGCTCCACCG +
Preference number: 4 (lower is better)
Translates to: GSQSHPRRRAGFITLATEAPSLS*PTMAPP
Trigger: CGGTGGAGCCATGGTCGGCCAACTGAGCGAGGGGGC...CTCAGTGGCCAGCGTGATGAAACCAGCACGTCTCCGTGGATGTGATTGGGAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR CCA 90 bp GGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGCAGCCACCGGATAGATAATGCTGGCTGCTGGCGCTaGAGGAGCTACTTGCGGCTG +
Preference number: 4 (lower is better)
Translates to: GEMCGQWQAVCCSHRIDNAGCWR*RSYLRL
Trigger: CAGCCGCAAGTAGCTCCTCCAGCGCCAGCAGCCAGC...ATTATCTATCCGGTGGCTGCAACACACCGCCTGCCATTGGCCGCACATCTCGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR CCA 90 bp GGAGTCCCTCTGTGTCTGTCCTCAGGAACGGAAGTCATCCCGTCTAGGGCTGGCGAACAGCAGGTCCTCTaGCTGCAGAGTGACCGCCGC +
Preference number: 4 (lower is better)
Translates to: GVPLCLSSGTEVIPSRAGEQQVL*LQSDRR
Trigger: GCGGCGGTCACTCTGCAGCCAGAGGACCTGCTGTTC...GCCAGCCCTAGACGGGATGACTTCCGTTCCTGAGGACAGACACAGAGGGACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp CGCCGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGCGGAAGTCTCGTTATTaGAGGTCATCTCGTAGTCAT +
Preference number: 4 (lower is better)
Translates to: RRTAGVRRRDVRPMAGGVRKSRY*RSSRSH
Trigger: ATGACTACGAGATGACCTTCAATAACGAGACTTCCG...CACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp GGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGCAGCCACCGGATAGATAATGCGCTAGCCACTGGCTaGCTCCGTAGGCCTGACACA +
Preference number: 4 (lower is better)
Translates to: GEMCGQWQAVCCSHRIDNALATG*LRRPDT
Trigger: TGTGTCAGGCCTACGGAGTCAGCCAGTGGCTAGCGC...ATTATCTATCCGGTGGCTGCAACACACCGCCTGCCATTGGCCGCACATCTCGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp CGCCGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTGGCCTTCTAACAGGTaGAAAGAAGAAAAGGAGACC +
Preference number: 4 (lower is better)
Translates to: RRTAGVRRRDVRPMAGGVWPSNR*KEEKET
Trigger: GGTCTCCTTTTCTTCTTTTCACCTGTTAGAAGGCCA...CACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp AGACAGACAGGACACCATCACTCCCCATATCCAAAAGCCTCCGCAGGCGGCATGTGCTGCTGGGCTGGCTaGTGGCGCTGGAGGAGCTAC +
Preference number: 4 (lower is better)
Translates to: RQTGHHHSPYPKASAGGMCCWAG*WRWRSY
Trigger: GTAGCTCCTCCAGCGCCAGCAGCCAGCCCAGCAGCA...CATGCCGCCTGCGGAGGCTTTTGGATATGGGGAGTGATGGTGTCCTGTCTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR GCA 90 bp GTCCACCATCAAGAGCCTCTGCACTGTGTAGCTAACATGGGATCGTCACACGGAGCGGCTGGGGCCTGCTaGTTGCTGCTGGGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: VHHQEPLHCVANMGSSHGAAGAC*LLLGWL
Trigger: CAGCCAGCCCAGCAGCAAGCAGCAGGCCCCAGCCGC...TCCGTGTGACGATCCCATGTTAGCTACACAGTGCAGAGGCTCTTGATGGTGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR CCA 90 bp CGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGGGGGGTGGTCACCACTaGAGAAGCAAAAACCTAGTT +
Preference number: 4 (lower is better)
Translates to: RTAGVRRRDVRPMAGGVLGGGHH*RSKNLV
Trigger: AACTAGGTTTTTGCTTCTCCAGTGGTGACCACCCCC...CAACACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp CGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGTACACCACAACCACCTaGGCGTATTTTCCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: RTAGVRRRDVRPMAGGVLYTTTT*AYFPLP
Trigger: AGGCAAAGGAAAATACGCTCAGGTGGTTGTGGTGTA...CAACACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp CTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGAGACTACCTCTGGCTGCAGAGTaGCCGCCGCACTGCCGGGGT +
Preference number: 4 (lower is better)
Translates to: LRPQSETEMRPSYHLLRLPLAAE*PPHCRG
Trigger: ACCCCGGCAGTGCGGCGGTCACTCTGCAGCCAGAGG...TAGTCTCAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp GGAGTCCCTCTGTGTCTGTCCTCAGGAACGGAAGTCATCCCGTCTAGGGCTGGCGGGAGTGACTGGTCTTaGGCTAGCCACTGGCTGACT +
Preference number: 4 (lower is better)
Translates to: GVPLCLSSGTEVIPSRAGGSDWS*ASHWLT
Trigger: AGTCAGCCAGTGGCTAGCGCAAGACCAGTCACTCCC...GCCAGCCCTAGACGGGATGACTTCCGTTCCTGAGGACAGACACAGAGGGACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp GGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGCAGCCACCGGATAGATAATGAGATGTGCGGCCAATaGCAGGCGGTGTGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: GEMCGQWQAVCCSHRIDNEMCGQ*QAVCCS
Trigger: GCTGCAACACACCGCCTGCCATTGGCCGCACATCTC...ATTATCTATCCGGTGGCTGCAACACACCGCCTGCCATTGGCCGCACATCTCGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp CGCCGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTTCGAGGTAAACTGTaGGCCAGAATCTATTTAGGC +
Preference number: 4 (lower is better)
Translates to: RRTAGVRRRDVRPMAGGVFRGKL*ARIYLG
Trigger: GCCTAAATAGATTCTGGCCCACAGTTTACCTCGAAA...CACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp AAATGGCTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGTCTGCGGCTGGGGCCTaGTGCTTGCTGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: KWLRPQSETEMRPSYHLLSAAGA*CLLLGW
Trigger: CCAGCCCAGCAGCAAGCAGCAGGCCCCAGCCGCAGA...CAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAGCCATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR GCA 90 bp AGCCGCTCGGATTTCCTTAGGGGACGGCAAGTCAATGCTTATCAGCGGTCCTCAAGCAGGTCCTCTGGCTaGAGAGTGACCGCCGCACTG +
Preference number: 4 (lower is better)
Translates to: SRSDFLRGRQVNAYQRSSSRSSG*RVTAAL
Trigger: CAGTGCGGCGGTCACTCTGCAGCCAGAGGACCTGCT...TGAGGACCGCTGATAAGCATTGACTTGCCGTCCCCTAAGGAAATCCGAGCGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp AGACAGACAGGACACCATCACTCCCCATATCCAAAAGCCTCCGCAGGCGGCATGGAGATGTGCGGCCAATaGCAGGCGGTGTGTTGCAGC +
Preference number: 4 (lower is better)
Translates to: RQTGHHHSPYPKASAGGMEMCGQ*QAVCCS
Trigger: GCTGCAACACACCGCCTGCCATTGGCCGCACATCTC...CATGCCGCCTGCGGAGGCTTTTGGATATGGGGAGTGATGGTGTCCTGTCTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp AGCCGCTCGGATTTCCTTAGGGGACGGCAAGTCAATGCTTATCAGCGGTCCTCACCGTCTAGGGCTGGCTaGCCCCTATGTCAACGGCAG +
Preference number: 4 (lower is better)
Translates to: SRSDFLRGRQVNAYQRSSPSRAG*PLCQRQ
Trigger: CTGCCGTTGACATAGGGGCCAGCCAGCCCTAGACGG...TGAGGACCGCTGATAAGCATTGACTTGCCGTCCCCTAAGGAAATCCGAGCGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp CTGTCCTGGTACCACGGCTGGTCAGGCCTCTTCACTGTGTGGACAGACACGTGGTCAATCCATCACTCATaGGCAGTCGATAACGCGGCG +
Preference number: 4 (lower is better)
Translates to: LSWYHGWSGLFTVWTDTWSIHHS*AVDNAA
Trigger: CGCCGCGTTATCGACTGCTCATGAGTGATGGATTGA...CCACGTGTCTGTCCACACAGTGAAGAGGCCTGACCAGCCGTGGTACCAGGACAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR TCA 90 bp GTCCACCATCAAGAGCCTCTGCACTGTGTAGCTAACATGGGATCGTCACACGGAATCCCCAGGTGCTCATaGCCGCTTCTCAGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: VHHQEPLHCVANMGSSHGIPRCS*PLLSSP
Trigger: GGGCGAGCTGAGAAGCGGTCATGAGCACCTGGGGAT...TCCGTGTGACGATCCCATGTTAGCTACACAGTGCAGAGGCTCTTGATGGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp GGAGTCCCTCTGTGTCTGTCCTCAGGAACGGAAGTCATCCCGTCTAGGGCTGGCGCCTCAGTCAGAGACTaGAATGCGACCCAGTTACCA +
Preference number: 4 (lower is better)
Translates to: GVPLCLSSGTEVIPSRAGASVRD*NATQLP
Trigger: TGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGC...GCCAGCCCTAGACGGGATGACTTCCGTTCCTGAGGACAGACACAGAGGGACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp GGAAATCTGTTAGAAACAGCCTCCTCGAGGGAGCCCTCCCCCTGGCACTGCCCCTTCCGTAAAAATGGCTaGGGCCTCAGTCAGAGACTG +
Preference number: 4 (lower is better)
Translates to: GNLLETASSREPSPWHCPFRKNG*GLSQRL
Trigger: CAGTCTCTGACTGAGGCCTCAGCCATTTTTACGGAA...GGGGCAGTGCCAGGGGGAGGGCTCCCTCGAGGAGGCTGTTTCTAACAGATTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp CGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGTCTGGCATACACAGTTaGTGGACAATTGTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: RTAGVRRRDVRPMAGGVLSGIHS*WTIVLP
Trigger: AGGAAGAACAATTGTCCAGCAACTGTGTATGCCAGA...CAACACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR GCA 90 bp GTCCACCATCAAGAGCCTCTGCACTGTGTAGCTAACATGGGATCGTCACACGGACCCGAGCTTCCATTCTaGGGCTGGGGCCTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: VHHQEPLHCVANMGSSHGPELPF*GWGLLL
Trigger: AAGCAGCAGGCCCCAGCCGCAGAATGGAAGCTCGGG...TCCGTGTGACGATCCCATGTTAGCTACACAGTGCAGAGGCTCTTGATGGTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR GCA 90 bp CTGTCCTGGTACCACGGCTGGTCAGGCCTCTTCACTGTGTGGACAGACACGTGGCTGCCCGATTGGCACTaGTCCTCTCACATCAATGCA +
Preference number: 4 (lower is better)
Translates to: LSWYHGWSGLFTVWTDTWLPDWH*SSHINA
Trigger: TGCATTGATGTGAGAGGAGCAGTGCCAATCGGGCAG...CCACGTGTCTGTCCACACAGTGAAGAGGCCTGACCAGCCGTGGTACCAGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp GGAGTCCCTCTGTGTCTGTCCTCAGGAACGGAAGTCATCCCGTCTAGGGCTGGCCTGCCCGATTGGCACTaGTCCTCTCACATCAATGCA +
Preference number: 4 (lower is better)
Translates to: GVPLCLSSGTEVIPSRAGLPDWH*SSHINA
Trigger: TGCATTGATGTGAGAGGAGCAGTGCCAATCGGGCAG...GCCAGCCCTAGACGGGATGACTTCCGTTCCTGAGGACAGACACAGAGGGACTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp AGACAGACAGGACACCATCACTCCCCATATCCAAAAGCCTCCGCAGGCGGCATGGGTGTCAGCGTTCCCTaGACACGTCCTGTCCTGGTA +
Preference number: 4 (lower is better)
Translates to: RQTGHHHSPYPKASAGGMGVSVP*TRPVLV
Trigger: TACCAGGACAGGACGTGTCCAGGGAACGCTGACACC...CATGCCGCCTGCGGAGGCTTTTGGATATGGGGAGTGATGGTGTCCTGTCTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp GGAAATCTGTTAGAAACAGCCTCCTCGAGGGAGCCCTCCCCCTGGCACTGCCCCCTCCAGGTACGGATCTaGCTTTTGTTGGTAACACGA +
Preference number: 4 (lower is better)
Translates to: GNLLETASSREPSPWHCPLQVRI*LLLVTR
Trigger: TCGTGTTACCAACAAAAGTCAGATCCGTACCTGGAG...GGGGCAGTGCCAGGGGGAGGGCTCCCTCGAGGAGGCTGTTTCTAACAGATTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR TCA 90 bp GCTAACATGGGATCGTCACACGGAGGTGGGAGGAAATCGATTCCATTCTGCCTAGCGCTAGCCACTGGCTaGCTCCGTAGGCCTGACACA +
Preference number: 4 (lower is better)
Translates to: ANMGSSHGGGRKSIPFCLALATG*LRRPDT
Trigger: TGTGTCAGGCCTACGGAGTCAGCCAGTGGCTAGCGC...TAGGCAGAATGGAATCGATTTCCTCCCACCTCCGTGTGACGATCCCATGTTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp GGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGCAGCCACCGGATAGATAATCGAGCATGCTTTTGCTaGCTGAAAGGCCCACTAGCA +
Preference number: 4 (lower is better)
Translates to: GEMCGQWQAVCCSHRIDNRACFC*LKGPLA
Trigger: TGCTAGTGGGCCTTTCAGTCAGCAAAAGCATGCTCG...ATTATCTATCCGGTGGCTGCAACACACCGCCTGCCATTGGCCGCACATCTCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp AAATGGCTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGCATCACGCTGGCCACTaGGAAGGCGCGAGGACAGGT +
Preference number: 4 (lower is better)
Translates to: KWLRPQSETEMRPSYHLLHHAGH*EGARTG
Trigger: ACCTGTCCTCGCGCCTTCTCAGTGGCCAGCGTGATG...CAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAGCCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp GGAAATCTGTTAGAAACAGCCTCCTCGAGGGAGCCCTCCCCCTGGCACTGCCCCGGCAGGCTTGGTACATaGAGTTCTCTTTGCGAAGAT +
Preference number: 4 (lower is better)
Translates to: GNLLETASSREPSPWHCPGRLGT*SSLCED
Trigger: ATCTTCGCAAAGAGAACTGCATGTACCAAGCCTGCC...GGGGCAGTGCCAGGGGGAGGGCTCCCTCGAGGAGGCTGTTTCTAACAGATTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR GCA 90 bp GGAAATCTGTTAGAAACAGCCTCCTCGAGGGAGCCCTCCCCCTGGCACTGCCCCCTATTTGCAAACTTCTaGCCGATTGGCACTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GNLLETASSREPSPWHCPLFANF*PIGTAP
Trigger: AGGAGCAGTGCCAATCGGGCAGAAGTTTGCAAATAG...GGGGCAGTGCCAGGGGGAGGGCTCCCTCGAGGAGGCTGTTTCTAACAGATTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp GCTAACATGGGATCGTCACACGGAGGTGGGAGGAAATCGATTCCATTCTGCCTATACGACGGCGAGATGTaGGGCCAATGGCAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: ANMGSSHGGGRKSIPFCLYDGEM*GQWQAV
Trigger: CACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTA...TAGGCAGAATGGAATCGATTTCCTCCCACCTCCGTGTGACGATCCCATGTTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp GGTTCCCAATCACATCCACGGAGACGTGCTGGTTTCATCACGCTGGCCACTGAGACATCCACGGAGACGTaGTGGTTTCATCACGCTGGC +
Preference number: 4 (lower is better)
Translates to: GSQSHPRRRAGFITLATETSTET*WFHHAG
Trigger: GCCAGCGTGATGAAACCAGCACGTCTCCGTGGATGT...CTCAGTGGCCAGCGTGATGAAACCAGCACGTCTCCGTGGATGTGATTGGGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp GGAAATCTGTTAGAAACAGCCTCCTCGAGGGAGCCCTCCCCCTGGCACTGCCCCACAAGGTTTTCCAGTTaGTGTTACTCCCTCCGACTC +
Preference number: 4 (lower is better)
Translates to: GNLLETASSREPSPWHCPTRFSS*CYSLRL
Trigger: GAGTCGGAGGGAGTAACACCAACTGGAAAACCTTGT...GGGGCAGTGCCAGGGGGAGGGCTCCCTCGAGGAGGCTGTTTCTAACAGATTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp CTGTCCTGGTACCACGGCTGGTCAGGCCTCTTCACTGTGTGGACAGACACGTGGCCAGGTTCTCGGATTTaGCCTCATACAAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: LSWYHGWSGLFTVWTDTWPGSRI*PHTRFS
Trigger: GGAAAACCTTGTATGAGGTCAAATCCGAGAACCTGG...CCACGTGTCTGTCCACACAGTGAAGAGGCCTGACCAGCCGTGGTACCAGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp AGACAGACAGGACACCATCACTCCCCATATCCAAAAGCCTCCGCAGGCGGCATGAGTGGAGCCAGTTTCTaGTGCTCCTCTGCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: RQTGHHHSPYPKASAGGMSGASF*CSSAGD
Trigger: ATCACCAGCAGAGGAGCATCAGAAACTGGCTCCACT...CATGCCGCCTGCGGAGGCTTTTGGATATGGGGAGTGATGGTGTCCTGTCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp CGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGAGTATTTATACTTTTTaGAGACAGCCCACTCAGGAA +
Preference number: 4 (lower is better)
Translates to: RTAGVRRRDVRPMAGGVLSIYTF*RQPTQE
Trigger: TTCCTGAGTGGGCTGTCTTCAAAAAGTATAAATACT...CAACACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp CGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGTTTTTGAGGAACCGATaGCTTCCAAAGGTGTTTATA +
Preference number: 4 (lower is better)
Translates to: RTAGVRRRDVRPMAGGVLFLRNR*LPKVFI
Trigger: TATAAACACCTTTGGAAGTCATCGGTTCCTCAAAAA...CAACACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp CTGTCCTGGTACCACGGCTGGTCAGGCCTCTTCACTGTGTGGACAGACACGTGGGAGCGTATTTTCCTTTaGCTACCGATGGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: LSWYHGWSGLFTVWTDTWERIFL*LPMGSE
Trigger: CTCAGAACCCATCGGTAGGCAAAGGAAAATACGCTC...CCACGTGTCTGTCCACACAGTGAAGAGGCCTGACCAGCCGTGGTACCAGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp GTCCACCATCAAGAGCCTCTGCACTGTGTAGCTAACATGGGATCGTCACACGGAGGGAGTGACTGGTCTTaGGCTAGCCACTGGCTGACT +
Preference number: 4 (lower is better)
Translates to: VHHQEPLHCVANMGSSHGGSDWS*ASHWLT
Trigger: AGTCAGCCAGTGGCTAGCGCAAGACCAGTCACTCCC...TCCGTGTGACGATCCCATGTTAGCTACACAGTGCAGAGGCTCTTGATGGTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp CGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGATCATTCTACCCTATTaGCATTCCAAGCATTACCAA +
Preference number: 4 (lower is better)
Translates to: RTAGVRRRDVRPMAGGVLIILPY*HSKHYQ
Trigger: TTGGTAATGCTTGGAATGGCAATAGGGTAGAATGAT...CAACACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp AGACAGACAGGACACCATCACTCCCCATATCCAAAAGCCTCCGCAGGCGGCATGGGGACGGCAAGTCAATaGTTATCAGCGGTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: RQTGHHHSPYPKASAGGMGTASQ*LSAVLR
Trigger: TCTGAGGACCGCTGATAAGCATTGACTTGCCGTCCC...CATGCCGCCTGCGGAGGCTTTTGGATATGGGGAGTGATGGTGTCCTGTCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp GGTTCCCAATCACATCCACGGAGACGTGCTGGTTTCATCACGCTGGCCACTGAGTGGCAGGCGGTGTGTTaGAGCCACCGGATAGATAAT +
Preference number: 4 (lower is better)
Translates to: GSQSHPRRRAGFITLATEWQAVC*SHRIDN
Trigger: ATTATCTATCCGGTGGCTGCAACACACCGCCTGCCA...CTCAGTGGCCAGCGTGATGAAACCAGCACGTCTCCGTGGATGTGATTGGGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp GGAGTCCCTCTGTGTCTGTCCTCAGGAACGGAAGTCATCCCGTCTAGGGCTGGCAGTCAGAGACTGAAATaGGACCCAGTTACCATCTCC +
Preference number: 4 (lower is better)
Translates to: GVPLCLSSGTEVIPSRAGSQRLK*DPVTIS
Trigger: GGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACT...GCCAGCCCTAGACGGGATGACTTCCGTTCCTGAGGACAGACACAGAGGGACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp AGCCGCTCGGATTTCCTTAGGGGACGGCAAGTCAATGCTTATCAGCGGTCCTCAACATCCACGGAGACGTaGTGGTTTCATCACGCTGGC +
Preference number: 4 (lower is better)
Translates to: SRSDFLRGRQVNAYQRSSTSTET*WFHHAG
Trigger: GCCAGCGTGATGAAACCAGCACGTCTCCGTGGATGT...TGAGGACCGCTGATAAGCATTGACTTGCCGTCCCCTAAGGAAATCCGAGCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp GGAAATCTGTTAGAAACAGCCTCCTCGAGGGAGCCCTCCCCCTGGCACTGCCCCGGCATACACAGTTGCTaGACAATTGTTCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GNLLETASSREPSPWHCPGIHSC*TIVLPP
Trigger: TGGAGGAAGAACAATTGTCCAGCAACTGTGTATGCC...GGGGCAGTGCCAGGGGGAGGGCTCCCTCGAGGAGGCTGTTTCTAACAGATTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR CCA 90 bp GGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGCAGCCACCGGATAGATAATAAACTTCTGCCCGATTaGCACTGCTCCTCTCACATC +
Preference number: 4 (lower is better)
Translates to: GEMCGQWQAVCCSHRIDNKLLPD*HCSSHI
Trigger: GATGTGAGAGGAGCAGTGCCAATCGGGCAGAAGTTT...ATTATCTATCCGGTGGCTGCAACACACCGCCTGCCATTGGCCGCACATCTCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp TGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAAGCCCACCGTCTAGGGCTGGCTaGCCCCTATGTCAACGGCAG +
Preference number: 4 (lower is better)
Translates to: WARIYLGNPQGPKSLKSPPSRAG*PLCQRQ
Trigger: CTGCCGTTGACATAGGGGCCAGCCAGCCCTAGACGG...TGGGCTTTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp GTCCACCATCAAGAGCCTCTGCACTGTGTAGCTAACATGGGATCGTCACACGGACTGGTTTCATCACGCTaGCCACTGAGAAGGCGCGAG +
Preference number: 4 (lower is better)
Translates to: VHHQEPLHCVANMGSSHGLVSSR*PLRRRE
Trigger: CTCGCGCCTTCTCAGTGGCCAGCGTGATGAAACCAG...TCCGTGTGACGATCCCATGTTAGCTACACAGTGCAGAGGCTCTTGATGGTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp GCTAACATGGGATCGTCACACGGAGGTGGGAGGAAATCGATTCCATTCTGCCTATGGACTGGTAAGGAGTaGGGCTGGCAATGGGCACCA +
Preference number: 4 (lower is better)
Translates to: ANMGSSHGGGRKSIPFCLWTGKE*GWQWAP
Trigger: TGGTGCCCATTGCCAGCCTCACTCCTTACCAGTCCA...TAGGCAGAATGGAATCGATTTCCTCCCACCTCCGTGTGACGATCCCATGTTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR TCA 90 bp GGTTCCCAATCACATCCACGGAGACGTGCTGGTTTCATCACGCTGGCCACTGAGCCTCTGCTGGTGATCTaGTCTTTGAGTGGGGAAATC +
Preference number: 4 (lower is better)
Translates to: GSQSHPRRRAGFITLATEPLLVI*SLSGEI
Trigger: GATTTCCCCACTCAAAGATCAGATCACCAGCAGAGG...CTCAGTGGCCAGCGTGATGAAACCAGCACGTCTCCGTGGATGTGATTGGGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp AAATGGCTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGCTTCCCCTCGGGAGTTaGTCCAGGTACGGATCTGAC +
Preference number: 4 (lower is better)
Translates to: KWLRPQSETEMRPSYHLLLPLGS*SRYGSD
Trigger: GTCAGATCCGTACCTGGAGCAACTCCCGAGGGGAAG...CAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAGCCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR GCA 90 bp AGCCGCTCGGATTTCCTTAGGGGACGGCAAGTCAATGCTTATCAGCGGTCCTCAGGGACGGCAAGTCAATaGTTATCAGCGGTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: SRSDFLRGRQVNAYQRSSGTASQ*LSAVLR
Trigger: TCTGAGGACCGCTGATAAGCATTGACTTGCCGTCCC...TGAGGACCGCTGATAAGCATTGACTTGCCGTCCCCTAAGGAAATCCGAGCGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp AGCCGCTCGGATTTCCTTAGGGGACGGCAAGTCAATGCTTATCAGCGGTCCTCATGGCAGGCGGTGTGTTaGAGCCACCGGATAGATAAT +
Preference number: 4 (lower is better)
Translates to: SRSDFLRGRQVNAYQRSSWQAVC*SHRIDN
Trigger: ATTATCTATCCGGTGGCTGCAACACACCGCCTGCCA...TGAGGACCGCTGATAAGCATTGACTTGCCGTCCCCTAAGGAAATCCGAGCGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp CTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGAGACTATCCGCAGGCGGCATGTaGAGTGATGAACAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: LRPQSETEMRPSYHLLRLSAGGM*SDEQQV
Trigger: GACCTGCTGTTCATCACTGCACATGCCGCCTGCGGA...TAGTCTCAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp GGAAATCTGTTAGAAACAGCCTCCTCGAGGGAGCCCTCCCCCTGGCACTGCCCCCGGATGTTGATGACTTaGAGGATGGGCTTTATGTTT +
Preference number: 4 (lower is better)
Translates to: GNLLETASSREPSPWHCPRMLMT*RMGFMF
Trigger: AAACATAAAGCCCATCCTCCAAGTCATCAACATCCG...GGGGCAGTGCCAGGGGGAGGGCTCCCTCGAGGAGGCTGTTTCTAACAGATTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR CCA 90 bp GGAAATCTGTTAGAAACAGCCTCCTCGAGGGAGCCCTCCCCCTGGCACTGCCCCAGGATCTCCATGCCTTaGACTAATCTTCGGGTTTAT +
Preference number: 4 (lower is better)
Translates to: GNLLETASSREPSPWHCPRISMP*TNLRVY
Trigger: ATAAACCCGAAGATTAGTCCAAGGCATGGAGATCCT...GGGGCAGTGCCAGGGGGAGGGCTCCCTCGAGGAGGCTGTTTCTAACAGATTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp GCTAACATGGGATCGTCACACGGAGGTGGGAGGAAATCGATTCCATTCTGCCTATCCACGGAGACGTGCTaGTTTCATCACGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: ANMGSSHGGGRKSIPFCLSTETC*FHHAGH
Trigger: GTGGCCAGCGTGATGAAACCAGCACGTCTCCGTGGA...TAGGCAGAATGGAATCGATTTCCTCCCACCTCCGTGTGACGATCCCATGTTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp GTCCACCATCAAGAGCCTCTGCACTGTGTAGCTAACATGGGATCGTCACACGGACGCAATGATAGTGCTTaGAGACAGCACGGAGAGGCT +
Preference number: 4 (lower is better)
Translates to: VHHQEPLHCVANMGSSHGRNDSA*RQHGEA
Trigger: AGCCTCTCCGTGCTGTCTTCAAGCACTATCATTGCG...TCCGTGTGACGATCCCATGTTAGCTACACAGTGCAGAGGCTCTTGATGGTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp GGAAATCTGTTAGAAACAGCCTCCTCGAGGGAGCCCTCCCCCTGGCACTGCCCCAGTGTTTTCATGCTTTaGAAGATGCATTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GNLLETASSREPSPWHCPSVFML*KMHFRA
Trigger: AGCCCTGAAATGCATCTTTCAAAGCATGAAAACACT...GGGGCAGTGCCAGGGGGAGGGCTCCCTCGAGGAGGCTGTTTCTAACAGATTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp AAACTGTGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAACATCACGCTGGCCACTaGGAAGGCGCGAGGACAGGT +
Preference number: 4 (lower is better)
Translates to: KLWARIYLGNPQGPKSLKHHAGH*EGARTG
Trigger: ACCTGTCCTCGCGCCTTCTCAGTGGCCAGCGTGATG...TTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCACAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp GTCCACCATCAAGAGCCTCTGCACTGTGTAGCTAACATGGGATCGTCACACGGATTTGTATCCCCCTTCTaGATGATGGCCGCAATGGCC +
Preference number: 4 (lower is better)
Translates to: VHHQEPLHCVANMGSSHGFVSPF*MMAAMA
Trigger: GGCCATTGCGGCCATCATGCAGAAGGGGGATACAAA...TCCGTGTGACGATCCCATGTTAGCTACACAGTGCAGAGGCTCTTGATGGTGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR GCA 90 bp AGACAGACAGGACACCATCACTCCCCATATCCAAAAGCCTCCGCAGGCGGCATGCAATCACTTTCTTATTaGAGTCCTGAGTCGGGCAGG +
Preference number: 4 (lower is better)
Translates to: RQTGHHHSPYPKASAGGMQSLSY*SPESGR
Trigger: CCTGCCCGACTCAGGACTGCAATAAGAAAGTGATTG...CATGCCGCCTGCGGAGGCTTTTGGATATGGGGAGTGATGGTGTCCTGTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR GCA 90 bp GGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGCAGCCACCGGATAGATAATCTCCTCTCACATCAATaGACTTCTCCTGATGCTCAT +
Preference number: 4 (lower is better)
Translates to: GEMCGQWQAVCCSHRIDNLLSHQ*TSPDAH
Trigger: ATGAGCATCAGGAGAAGTGCATTGATGTGAGAGGAG...ATTATCTATCCGGTGGCTGCAACACACCGCCTGCCATTGGCCGCACATCTCGCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp GGTTCCCAATCACATCCACGGAGACGTGCTGGTTTCATCACGCTGGCCACTGAGGAAGAAGGATCTCCATaGCTTGGACTAATCTTCGGG +
Preference number: 4 (lower is better)
Translates to: GSQSHPRRRAGFITLATEEEGSP*LGLIFG
Trigger: CCCGAAGATTAGTCCAAGGCATGGAGATCCTTCTTC...CTCAGTGGCCAGCGTGATGAAACCAGCACGTCTCCGTGGATGTGATTGGGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp AAACTGTGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAATACGACGGCGAGATGTaGGGCCAATGGCAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: KLWARIYLGNPQGPKSLKYDGEM*GQWQAV
Trigger: CACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTA...TTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCACAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp GTCCACCATCAAGAGCCTCTGCACTGTGTAGCTAACATGGGATCGTCACACGGACCTCTGCTGGTGATCTaGTCTTTGAGTGGGGAAATC +
Preference number: 4 (lower is better)
Translates to: VHHQEPLHCVANMGSSHGPLLVI*SLSGEI
Trigger: GATTTCCCCACTCAAAGATCAGATCACCAGCAGAGG...TCCGTGTGACGATCCCATGTTAGCTACACAGTGCAGAGGCTCTTGATGGTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp AGACAGACAGGACACCATCACTCCCCATATCCAAAAGCCTCCGCAGGCGGCATGTATAGGGCACTGGATTaGCAATCTTCACTCCAACTG +
Preference number: 4 (lower is better)
Translates to: RQTGHHHSPYPKASAGGMYRALD*QSSLQL
Trigger: CAGTTGGAGTGAAGATTGGCAATCCAGTGCCCTATA...CATGCCGCCTGCGGAGGCTTTTGGATATGGGGAGTGATGGTGTCCTGTCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR GCA 90 bp GGAAATCTGTTAGAAACAGCCTCCTCGAGGGAGCCCTCCCCCTGGCACTGCCCCAAATCGATTCCATTCTaGCTATTTGCAAACTTCTGC +
Preference number: 4 (lower is better)
Translates to: GNLLETASSREPSPWHCPKSIPF*LFANFC
Trigger: GCAGAAGTTTGCAAATAGGCAGAATGGAATCGATTT...GGGGCAGTGCCAGGGGGAGGGCTCCCTCGAGGAGGCTGTTTCTAACAGATTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp AGCCGCTCGGATTTCCTTAGGGGACGGCAAGTCAATGCTTATCAGCGGTCCTCAAGTCAGAGACTGAAATaGGACCCAGTTACCATCTCC +
Preference number: 4 (lower is better)
Translates to: SRSDFLRGRQVNAYQRSSSQRLK*DPVTIS
Trigger: GGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACT...TGAGGACCGCTGATAAGCATTGACTTGCCGTCCCCTAAGGAAATCCGAGCGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp GGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGCAGCCACCGGATAGATAATTTCATTATAGGGCACTaGATTGCCAATCTTCACTCC +
Preference number: 4 (lower is better)
Translates to: GEMCGQWQAVCCSHRIDNFIIGH*IANLHS
Trigger: GGAGTGAAGATTGGCAATCCAGTGCCCTATAATGAA...ATTATCTATCCGGTGGCTGCAACACACCGCCTGCCATTGGCCGCACATCTCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR CCA 90 bp AAACTGTGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAACTTCCATTCTGCGGCTaGGGCCTGCTGCTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: KLWARIYLGNPQGPKSLKLPFCG*GLLLAA
Trigger: AGCAGCAAGCAGCAGGCCCCAGCCGCAGAATGGAAG...TTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCACAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR CCA 90 bp AGACAGACAGGACACCATCACTCCCCATATCCAAAAGCCTCCGCAGGCGGCATGAAGCTTATAGGCCTCTaGGATGTCAGGATTCGCAAT +
Preference number: 4 (lower is better)
Translates to: RQTGHHHSPYPKASAGGMKLIGL*DVRIRN
Trigger: ATTGCGAATCCTGACATCCCAGAGGCCTATAAGCTT...CATGCCGCCTGCGGAGGCTTTTGGATATGGGGAGTGATGGTGTCCTGTCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp GGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGCAGCCACCGGATAGATAATCGGAAGTTGGCATTCTaGAAAACTTCTTCAAATGCC +
Preference number: 4 (lower is better)
Translates to: GEMCGQWQAVCCSHRIDNRKLAF*KTSSNA
Trigger: GGCATTTGAAGAAGTTTTCCAGAATGCCAACTTCCG...ATTATCTATCCGGTGGCTGCAACACACCGCCTGCCATTGGCCGCACATCTCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp AGCCGCTCGGATTTCCTTAGGGGACGGCAAGTCAATGCTTATCAGCGGTCCTCAATCGTCACACGGAGGTaGGAGGAAATCGATTCCATT +
Preference number: 4 (lower is better)
Translates to: SRSDFLRGRQVNAYQRSSIVTRR*EEIDSI
Trigger: AATGGAATCGATTTCCTCCCACCTCCGTGTGACGAT...TGAGGACCGCTGATAAGCATTGACTTGCCGTCCCCTAAGGAAATCCGAGCGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp AAATGGCTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGTCCTTTGCCTACCGATaGGTTCTGAGATGCGCACGA +
Preference number: 4 (lower is better)
Translates to: KWLRPQSETEMRPSYHLLSFAYR*VLRCAR
Trigger: TCGTGCGCATCTCAGAACCCATCGGTAGGCAAAGGA...CAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAGCCATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp AGACAGACAGGACACCATCACTCCCCATATCCAAAAGCCTCCGCAGGCGGCATGACACATTTCAAAGCGTaGTTGGTGTTAGACTGCTGC +
Preference number: 4 (lower is better)
Translates to: RQTGHHHSPYPKASAGGMTHFKA*LVLDCC
Trigger: GCAGCAGTCTAACACCAACCACGCTTTGAAATGTGT...CATGCCGCCTGCGGAGGCTTTTGGATATGGGGAGTGATGGTGTCCTGTCTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp GGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGCAGCCACCGGATAGATAATTTTCGAGGTAAACTGTaGGCCAGAATCTATTTAGGC +
Preference number: 4 (lower is better)
Translates to: GEMCGQWQAVCCSHRIDNFRGKL*ARIYLG
Trigger: GCCTAAATAGATTCTGGCCCACAGTTTACCTCGAAA...ATTATCTATCCGGTGGCTGCAACACACCGCCTGCCATTGGCCGCACATCTCGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp GTCCACCATCAAGAGCCTCTGCACTGTGTAGCTAACATGGGATCGTCACACGGATACACCACAACCACCTaGGCGTATTTTCCTTTGCCT +
Preference number: 4 (lower is better)
Translates to: VHHQEPLHCVANMGSSHGYTTTT*AYFPLP
Trigger: AGGCAAAGGAAAATACGCTCAGGTGGTTGTGGTGTA...TCCGTGTGACGATCCCATGTTAGCTACACAGTGCAGAGGCTCTTGATGGTGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp GGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGCAGCCACCGGATAGATAATAATATCAGACCCATCTaGCTCAGTCTATTAAACCCT +
Preference number: 4 (lower is better)
Translates to: GEMCGQWQAVCCSHRIDNNIRPI*LSLLNP
Trigger: AGGGTTTAATAGACTGAGTCAGATGGGTCTGATATT...ATTATCTATCCGGTGGCTGCAACACACCGCCTGCCATTGGCCGCACATCTCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp TGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAAGCCCAGCCTCAGTCAGAGACTaGAATGCGACCCAGTTACCA +
Preference number: 4 (lower is better)
Translates to: WARIYLGNPQGPKSLKSPASVRD*NATQLP
Trigger: TGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGC...TGGGCTTTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp GGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGCAGCCACCGGATAGATAATTTAACAGCTGTGAACTaGTTGTTAGCAATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GEMCGQWQAVCCSHRIDNLTAVN*LLAIFR
Trigger: CCTGAAGATTGCTAACAAGCAGTTCACAGCTGTTAA...ATTATCTATCCGGTGGCTGCAACACACCGCCTGCCATTGGCCGCACATCTCGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp CTGTCCTGGTACCACGGCTGGTCAGGCCTCTTCACTGTGTGGACAGACACGTGGATCATTCTACCCTATTaGCATTCCAAGCATTACCAA +
Preference number: 4 (lower is better)
Translates to: LSWYHGWSGLFTVWTDTWIILPY*HSKHYQ
Trigger: TTGGTAATGCTTGGAATGGCAATAGGGTAGAATGAT...CCACGTGTCTGTCCACACAGTGAAGAGGCCTGACCAGCCGTGGTACCAGGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp AAACTGTGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAATCCGCAGGCGGCATGTaGAGTGATGAACAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: KLWARIYLGNPQGPKSLKSAGGM*SDEQQV
Trigger: GACCTGCTGTTCATCACTGCACATGCCGCCTGCGGA...TTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCACAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp AGCCGCTCGGATTTCCTTAGGGGACGGCAAGTCAATGCTTATCAGCGGTCCTCACCTTGGGCGGCATATTaGCAAAGAAACATGAGTCAA +
Preference number: 4 (lower is better)
Translates to: SRSDFLRGRQVNAYQRSSPWAAY*QRNMSQ
Trigger: TTGACTCATGTTTCTTTGGCAATATGCCGCCCAAGG...TGAGGACCGCTGATAAGCATTGACTTGCCGTCCCCTAAGGAAATCCGAGCGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp TGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAAGCCCACAATGGGCACCACTTTaGACTGTGTTCCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: WARIYLGNPQGPKSLKSPQWAPL*TVFPQK
Trigger: CTTCTGGGGGAACACAGTCCAAAGTGGTGCCCATTG...TGGGCTTTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR CCA 90 bp GGAGTCCCTCTGTGTCTGTCCTCAGGAACGGAAGTCATCCCGTCTAGGGCTGGCTCTTTAGATCAGAGATaGAAACACCATCTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: GVPLCLSSGTEVIPSRAGSLDQR*KHHLRL
Trigger: AAGCCTTAGATGGTGTTTCCATCTCTGATCTAAAGA...GCCAGCCCTAGACGGGATGACTTCCGTTCCTGAGGACAGACACAGAGGGACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp AAACTGTGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAATCCGGCTTGTCGCCTTaGCCCAGGTTCTCGGATTTG +
Preference number: 4 (lower is better)
Translates to: KLWARIYLGNPQGPKSLKSGLSP*PRFSDL
Trigger: CAAATCCGAGAACCTGGGCCAAGGCGACAAGCCGGA...TTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCACAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR CCA 90 bp GCTAACATGGGATCGTCACACGGAGGTGGGAGGAAATCGATTCCATTCTGCCTAAAACTTCTGCCCGATTaGCACTGCTCCTCTCACATC +
Preference number: 4 (lower is better)
Translates to: ANMGSSHGGGRKSIPFCLKLLPD*HCSSHI
Trigger: GATGTGAGAGGAGCAGTGCCAATCGGGCAGAAGTTT...TAGGCAGAATGGAATCGATTTCCTCCCACCTCCGTGTGACGATCCCATGTTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp TGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAAGCCCATCCTTTGCCTACCGATaGGTTCTGAGATGCGCACGA +
Preference number: 4 (lower is better)
Translates to: WARIYLGNPQGPKSLKSPSFAYR*VLRCAR
Trigger: TCGTGCGCATCTCAGAACCCATCGGTAGGCAAAGGA...TGGGCTTTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp GCTAACATGGGATCGTCACACGGAGGTGGGAGGAAATCGATTCCATTCTGCCTAGGGGGTGGTCACCACTaGAGAAGCAAAAACCTAGTT +
Preference number: 4 (lower is better)
Translates to: ANMGSSHGGGRKSIPFCLGGGHH*RSKNLV
Trigger: AACTAGGTTTTTGCTTCTCCAGTGGTGACCACCCCC...TAGGCAGAATGGAATCGATTTCCTCCCACCTCCGTGTGACGATCCCATGTTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp ACTGAAAGGCCCACTAGCATAATTACTGTTTTCTTACCAGCTCACTGTCTGTACGGACACGTCCTGTCCTaGTACCACGGCTGGTCAGGC +
Preference number: 4 (lower is better)
Translates to: TERPTSIITVFLPAHCLYGHVLS*YHGWSG
Trigger: GCCTGACCAGCCGTGGTACCAGGACAGGACGTGTCC...GTACAGACAGTGAGCTGGTAAGAAAACAGTAATTATGCTAGTGGGCCTTTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp GTCCACCATCAAGAGCCTCTGCACTGTGTAGCTAACATGGGATCGTCACACGGATCTTGCAGATCCCGATaGTGTCTACAAGTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: VHHQEPLHCVANMGSSHGSCRSR*CLQVSL
Trigger: AAGACTCACTTGTAGACATCATCGGGATCTGCAAGA...TCCGTGTGACGATCCCATGTTAGCTACACAGTGCAGAGGCTCTTGATGGTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp GTCCACCATCAAGAGCCTCTGCACTGTGTAGCTAACATGGGATCGTCACACGGAGGATCATGCGGTACTTaGAATTGGGAAATTCGGTGT +
Preference number: 4 (lower is better)
Translates to: VHHQEPLHCVANMGSSHGGSCGT*NWEIRC
Trigger: ACACCGAATTTCCCAATTTCAAGTACCGCATGATCC...TCCGTGTGACGATCCCATGTTAGCTACACAGTGCAGAGGCTCTTGATGGTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR TCA 90 bp AGCCGCTCGGATTTCCTTAGGGGACGGCAAGTCAATGCTTATCAGCGGTCCTCACAGTCTATTAAACCCTaGAGGAAGGATACTCTTCAG +
Preference number: 4 (lower is better)
Translates to: SRSDFLRGRQVNAYQRSSQSIKP*RKDTLQ
Trigger: CTGAAGAGTATCCTTCCTTCAGGGTTTAATAGACTG...TGAGGACCGCTGATAAGCATTGACTTGCCGTCCCCTAAGGAAATCCGAGCGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp GTCCACCATCAAGAGCCTCTGCACTGTGTAGCTAACATGGGATCGTCACACGGATGGCCTTCTAACAGGTaGAAAGAAGAAAAGGAGACC +
Preference number: 4 (lower is better)
Translates to: VHHQEPLHCVANMGSSHGWPSNR*KEEKET
Trigger: GGTCTCCTTTTCTTCTTTTCACCTGTTAGAAGGCCA...TCCGTGTGACGATCCCATGTTAGCTACACAGTGCAGAGGCTCTTGATGGTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp GTCCACCATCAAGAGCCTCTGCACTGTGTAGCTAACATGGGATCGTCACACGGAACATGCAGTTCTCTTTaGGAAGATACACCACTGTGG +
Preference number: 4 (lower is better)
Translates to: VHHQEPLHCVANMGSSHGTCSSL*EDTPLW
Trigger: CCACAGTGGTGTATCTTCGCAAAGAGAACTGCATGT...TCCGTGTGACGATCCCATGTTAGCTACACAGTGCAGAGGCTCTTGATGGTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR GCA 90 bp AAATGGCTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGGAAGAAGGATCTCCATaGCTTGGACTAATCTTCGGG +
Preference number: 4 (lower is better)
Translates to: KWLRPQSETEMRPSYHLLEEGSP*LGLIFG
Trigger: CCCGAAGATTAGTCCAAGGCATGGAGATCCTTCTTC...CAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAGCCATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp AAATGGCTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGACAAGGTTTTCCAGTTaGTGTTACTCCCTCCGACTC +
Preference number: 4 (lower is better)
Translates to: KWLRPQSETEMRPSYHLLTRFSS*CYSLRL
Trigger: GAGTCGGAGGGAGTAACACCAACTGGAAAACCTTGT...CAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAGCCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp ACTGAAAGGCCCACTAGCATAATTACTGTTTTCTTACCAGCTCACTGTCTGTACGGCAGAGGGAGTGACTaGTCTTGCGCTAGCCACTGG +
Preference number: 4 (lower is better)
Translates to: TERPTSIITVFLPAHCLYGRGSD*SCASHW
Trigger: CCAGTGGCTAGCGCAAGACCAGTCACTCCCTCTGCC...GTACAGACAGTGAGCTGGTAAGAAAACAGTAATTATGCTAGTGGGCCTTTCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp CTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGAGACTAACTGTGTCGCCAACATaGAAGAGGATAGAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: LRPQSETEMRPSYHLLRLTVSPT*KRIECS
Trigger: TGAACACTCTATCCTCTTTCATGTTGGCGACACAGT...TAGTCTCAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR TCA 90 bp GGTTCCCAATCACATCCACGGAGACGTGCTGGTTTCATCACGCTGGCCACTGAGTTTTCCAAATGTCTTTaGAGCACCATAAGCCTTAGA +
Preference number: 4 (lower is better)
Translates to: GSQSHPRRRAGFITLATEFSKCL*STISLR
Trigger: TCTAAGGCTTATGGTGCTTCAAAGACATTTGGAAAA...CTCAGTGGCCAGCGTGATGAAACCAGCACGTCTCCGTGGATGTGATTGGGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR TCA 90 bp AAATGGCTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGCGGAAGTCTCGTTATTaGAGGTCATCTCGTAGTCAT +
Preference number: 4 (lower is better)
Translates to: KWLRPQSETEMRPSYHLLRKSRY*RSSRSH
Trigger: ATGACTACGAGATGACCTTCAATAACGAGACTTCCG...CAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAGCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp AGACAGACAGGACACCATCACTCCCCATATCCAAAAGCCTCCGCAGGCGGCATGAGTATTTATACTTTTTaGAGACAGCCCACTCAGGAA +
Preference number: 4 (lower is better)
Translates to: RQTGHHHSPYPKASAGGMSIYTF*RQPTQE
Trigger: TTCCTGAGTGGGCTGTCTTCAAAAAGTATAAATACT...CATGCCGCCTGCGGAGGCTTTTGGATATGGGGAGTGATGGTGTCCTGTCTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp AGACAGACAGGACACCATCACTCCCCATATCCAAAAGCCTCCGCAGGCGGCATGTTTTTGAGGAACCGATaGCTTCCAAAGGTGTTTATA +
Preference number: 4 (lower is better)
Translates to: RQTGHHHSPYPKASAGGMFLRNR*LPKVFI
Trigger: TATAAACACCTTTGGAAGTCATCGGTTCCTCAAAAA...CATGCCGCCTGCGGAGGCTTTTGGATATGGGGAGTGATGGTGTCCTGTCTGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp GCTAACATGGGATCGTCACACGGAGGTGGGAGGAAATCGATTCCATTCTGCCTACTCCTCTCACATCAATaGACTTCTCCTGATGCTCAT +
Preference number: 4 (lower is better)
Translates to: ANMGSSHGGGRKSIPFCLLLSHQ*TSPDAH
Trigger: ATGAGCATCAGGAGAAGTGCATTGATGTGAGAGGAG...TAGGCAGAATGGAATCGATTTCCTCCCACCTCCGTGTGACGATCCCATGTTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp AAATGGCTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGTCCATTCTGCCTATTTaGAAACTTCTGCCCGATTGG +
Preference number: 4 (lower is better)
Translates to: KWLRPQSETEMRPSYHLLSILPI*KLLPDW
Trigger: CCAATCGGGCAGAAGTTTGCAAATAGGCAGAATGGA...CAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAGCCATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp ACTGAAAGGCCCACTAGCATAATTACTGTTTTCTTACCAGCTCACTGTCTGTACTCAGTTGGCCGACCATaGCTCCACCGCCAAGACTTC +
Preference number: 4 (lower is better)
Translates to: TERPTSIITVFLPAHCLYSVGRP*LHRQDF
Trigger: GAAGTCTTGGCGGTGGAGCCATGGTCGGCCAACTGA...GTACAGACAGTGAGCTGGTAAGAAAACAGTAATTATGCTAGTGGGCCTTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR CCA 90 bp CTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGAGACTAACACATTTCAAAGCGTaGTTGGTGTTAGACTGCTGC +
Preference number: 4 (lower is better)
Translates to: LRPQSETEMRPSYHLLRLTHFKA*LVLDCC
Trigger: GCAGCAGTCTAACACCAACCACGCTTTGAAATGTGT...TAGTCTCAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp AAATGGCTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGGATGATGTCTACAAGTaGGTCTTTCGACTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: KWLRPQSETEMRPSYHLLDDVYK*VFRLVL
Trigger: GAGAACAAGTCGAAAGACTCACTTGTAGACATCATC...CAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAGCCATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp CTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGAGACTACAGTCTATTAAACCCTaGAGGAAGGATACTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LRPQSETEMRPSYHLLRLQSIKP*RKDTLQ
Trigger: CTGAAGAGTATCCTTCCTTCAGGGTTTAATAGACTG...TAGTCTCAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp GTCCACCATCAAGAGCCTCTGCACTGTGTAGCTAACATGGGATCGTCACACGGATTAACAGCTGTGAACTaGTTGTTAGCAATCTTCAGG +
Preference number: 4 (lower is better)
Translates to: VHHQEPLHCVANMGSSHGLTAVN*LLAIFR
Trigger: CCTGAAGATTGCTAACAAGCAGTTCACAGCTGTTAA...TCCGTGTGACGATCCCATGTTAGCTACACAGTGCAGAGGCTCTTGATGGTGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp TGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAAGCCCATCCATTCTGCCTATTTaGAAACTTCTGCCCGATTGG +
Preference number: 4 (lower is better)
Translates to: WARIYLGNPQGPKSLKSPSILPI*KLLPDW
Trigger: CCAATCGGGCAGAAGTTTGCAAATAGGCAGAATGGA...TGGGCTTTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp AGCCGCTCGGATTTCCTTAGGGGACGGCAAGTCAATGCTTATCAGCGGTCCTCAAAATCGATTCCATTCTaGCTATTTGCAAACTTCTGC +
Preference number: 4 (lower is better)
Translates to: SRSDFLRGRQVNAYQRSSKSIPF*LFANFC
Trigger: GCAGAAGTTTGCAAATAGGCAGAATGGAATCGATTT...TGAGGACCGCTGATAAGCATTGACTTGCCGTCCCCTAAGGAAATCCGAGCGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp TGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAAGCCCACCTTGGGCGGCATATTaGCAAAGAAACATGAGTCAA +
Preference number: 4 (lower is better)
Translates to: WARIYLGNPQGPKSLKSPPWAAY*QRNMSQ
Trigger: TTGACTCATGTTTCTTTGGCAATATGCCGCCCAAGG...TGGGCTTTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp AAACTGTGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAAAGTGTGTGACAGGCTaGGACCTGCAGCTTTTCCAA +
Preference number: 4 (lower is better)
Translates to: KLWARIYLGNPQGPKSLKKCVTG*DLQLFQ
Trigger: TTGGAAAAGCTGCAGGTCCCAGCCTGTCACACACTT...TTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCACAGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR CCA 90 bp CTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGAGACTAAGGATCTCCATGCCTTaGACTAATCTTCGGGTTTAT +
Preference number: 4 (lower is better)
Translates to: LRPQSETEMRPSYHLLRLRISMP*TNLRVY
Trigger: ATAAACCCGAAGATTAGTCCAAGGCATGGAGATCCT...TAGTCTCAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp GTCCACCATCAAGAGCCTCTGCACTGTGTAGCTAACATGGGATCGTCACACGGACTAACGCTGATGTCATaGTGTACGCAAAATCAACAT +
Preference number: 4 (lower is better)
Translates to: VHHQEPLHCVANMGSSHGLTLMS*CTQNQH
Trigger: ATGTTGATTTTGCGTACACCATGACATCAGCGTTAG...TCCGTGTGACGATCCCATGTTAGCTACACAGTGCAGAGGCTCTTGATGGTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp AAACTGTGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAACCAGGTTCTCGGATTTaGCCTCATACAAGGTTTTCC +
Preference number: 4 (lower is better)
Translates to: KLWARIYLGNPQGPKSLKPGSRI*PHTRFS
Trigger: GGAAAACCTTGTATGAGGTCAAATCCGAGAACCTGG...TTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCACAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp CTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGAGACTAATCTGCAATATTTACTaGCAGGATCATGCGGTACTT +
Preference number: 4 (lower is better)
Translates to: LRPQSETEMRPSYHLLRLICNIY*QDHAVL
Trigger: AAGTACCGCATGATCCTGTCAGTAAATATTGCAGAT...TAGTCTCAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR TCA 90 bp ACTGAAAGGCCCACTAGCATAATTACTGTTTTCTTACCAGCTCACTGTCTGTACCGAGCATGCTTTTGCTaGCTGAAAGGCCCACTAGCA +
Preference number: 4 (lower is better)
Translates to: TERPTSIITVFLPAHCLYRACFC*LKGPLA
Trigger: TGCTAGTGGGCCTTTCAGTCAGCAAAAGCATGCTCG...GTACAGACAGTGAGCTGGTAAGAAAACAGTAATTATGCTAGTGGGCCTTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp ACTGAAAGGCCCACTAGCATAATTACTGTTTTCTTACCAGCTCACTGTCTGTACGACTGGTTACTGGGCTaGAAGCTAGATCGCCACTTC +
Preference number: 4 (lower is better)
Translates to: TERPTSIITVFLPAHCLYDWLLG*KLDRHF
Trigger: GAAGTGGCGATCTAGCTTTCAGCCCAGTAACCAGTC...GTACAGACAGTGAGCTGGTAAGAAAACAGTAATTATGCTAGTGGGCCTTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp ACTGAAAGGCCCACTAGCATAATTACTGTTTTCTTACCAGCTCACTGTCTGTACAGTGGAGCCAGTTTCTaGTGCTCCTCTGCTGGTGAT +
Preference number: 4 (lower is better)
Translates to: TERPTSIITVFLPAHCLYSGASF*CSSAGD
Trigger: ATCACCAGCAGAGGAGCATCAGAAACTGGCTCCACT...GTACAGACAGTGAGCTGGTAAGAAAACAGTAATTATGCTAGTGGGCCTTTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp AAACTGTGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAGAGCGTATTTTCCTTTaGCTACCGATGGGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: KLWARIYLGNPQGPKSLKERIFL*LPMGSE
Trigger: CTCAGAACCCATCGGTAGGCAAAGGAAAATACGCTC...TTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCACAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp CTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGAGACTAACGCAAAATCAACATTaGTCTCTAAGTGAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: LRPQSETEMRPSYHLLRLTQNQH*SLSERG
Trigger: TCCTCTTTCACTTAGAGATCAATGTTGATTTTGCGT...TAGTCTCAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp GCTAACATGGGATCGTCACACGGAGGTGGGAGGAAATCGATTCCATTCTGCCTATGGTTGGTGTTAGACTaGTGCGTAAACATCAATAAA +
Preference number: 4 (lower is better)
Translates to: ANMGSSHGGGRKSIPFCLWLVLD*CVNINK
Trigger: TTTATTGATGTTTACGCAGCAGTCTAACACCAACCA...TAGGCAGAATGGAATCGATTTCCTCCCACCTCCGTGTGACGATCCCATGTTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp AAACTGTGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAAAGCTTATAGGCCTCTaGGATGTCAGGATTCGCAAT +
Preference number: 4 (lower is better)
Translates to: KLWARIYLGNPQGPKSLKKLIGL*DVRIRN
Trigger: ATTGCGAATCCTGACATCCCAGAGGCCTATAAGCTT...TTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCACAGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp CTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGAGACTATCTTTAGATCAGAGATaGAAACACCATCTAAGGCTT +
Preference number: 4 (lower is better)
Translates to: LRPQSETEMRPSYHLLRLSLDQR*KHHLRL
Trigger: AAGCCTTAGATGGTGTTTCCATCTCTGATCTAAAGA...TAGTCTCAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR CAA 72 bp GGGCTGAAAGCTAGATCGCCACTTCCCAGCCACAATTaGTCAATCCAGAAGAGGGTTGAAGACTGTAATTTT +
Preference number: 4 (lower is better)
Translates to: GLKARSPLPSHN*SIQKRVEDCNF
Trigger: AAAATTACAGTCTTCAACCCTCTTCTGGATTGACAAATTGTGGCTGGGAAGTGGCGATCTAGCTTTCAGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp TGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAAGCCCATTCACAATAAATCTGTaGATCTGGCATACACAGTTG +
Preference number: 4 (lower is better)
Translates to: WARIYLGNPQGPKSLKSPFTINL*IWHTQL
Trigger: CAACTGTGTATGCCAGATTCACAGATTTATTGTGAA...TGGGCTTTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR TCA 90 bp AAACTGTGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAGATGATGTCTACAAGTaGGTCTTTCGACTTGTTCTC +
Preference number: 4 (lower is better)
Translates to: KLWARIYLGNPQGPKSLKDDVYK*VFRLVL
Trigger: GAGAACAAGTCGAAAGACTCACTTGTAGACATCATC...TTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCACAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp AAATGGCTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGTTGGTGTTAGACTGCTaGGTAAACATCAATAAAATC +
Preference number: 4 (lower is better)
Translates to: KWLRPQSETEMRPSYHLLLVLDC*VNINKI
Trigger: GATTTTATTGATGTTTACGCAGCAGTCTAACACCAA...CAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAGCCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp ACTGAAAGGCCCACTAGCATAATTACTGTTTTCTTACCAGCTCACTGTCTGTACTCTTGCAGATCCCGATaGTGTCTACAAGTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: TERPTSIITVFLPAHCLYSCRSR*CLQVSL
Trigger: AAGACTCACTTGTAGACATCATCGGGATCTGCAAGA...GTACAGACAGTGAGCTGGTAAGAAAACAGTAATTATGCTAGTGGGCCTTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp AAACTGTGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAAGTGTTTTCATGCTTTaGAAGATGCATTTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: KLWARIYLGNPQGPKSLKSVFML*KMHFRA
Trigger: AGCCCTGAAATGCATCTTTCAAAGCATGAAAACACT...TTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCACAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp AAACTGTGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAAAGAACTTGTCCACTTaGTCATTGAAAGCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: KLWARIYLGNPQGPKSLKKNLST*SLKAVA
Trigger: AGCTACAGCTTTCAATGAGCAAGTGGACAAGTTCTT...TTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCACAGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR GCA 90 bp TGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAAGCCCATTGGTGTTAGACTGCTaGGTAAACATCAATAAAATC +
Preference number: 4 (lower is better)
Translates to: WARIYLGNPQGPKSLKSPLVLDC*VNINKI
Trigger: GATTTTATTGATGTTTACGCAGCAGTCTAACACCAA...TGGGCTTTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR GCA 90 bp AAACTGTGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAATGGTTGGTGTTAGACTaGTGCGTAAACATCAATAAA +
Preference number: 4 (lower is better)
Translates to: KLWARIYLGNPQGPKSLKWLVLD*CVNINK
Trigger: TTTATTGATGTTTACGCAGCAGTCTAACACCAACCA...TTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCACAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp ACTGAAAGGCCCACTAGCATAATTACTGTTTTCTTACCAGCTCACTGTCTGTACCGGAAGTTGGCATTCTaGAAAACTTCTTCAAATGCC +
Preference number: 4 (lower is better)
Translates to: TERPTSIITVFLPAHCLYRKLAF*KTSSNA
Trigger: GGCATTTGAAGAAGTTTTCCAGAATGCCAACTTCCG...GTACAGACAGTGAGCTGGTAAGAAAACAGTAATTATGCTAGTGGGCCTTTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp ACTGAAAGGCCCACTAGCATAATTACTGTTTTCTTACCAGCTCACTGTCTGTACAATATCAGACCCATCTaGCTCAGTCTATTAAACCCT +
Preference number: 4 (lower is better)
Translates to: TERPTSIITVFLPAHCLYNIRPI*LSLLNP
Trigger: AGGGTTTAATAGACTGAGTCAGATGGGTCTGATATT...GTACAGACAGTGAGCTGGTAAGAAAACAGTAATTATGCTAGTGGGCCTTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CCA 90 bp ACTGAAAGGCCCACTAGCATAATTACTGTTTTCTTACCAGCTCACTGTCTGTACCTAACGCTGATGTCATaGTGTACGCAAAATCAACAT +
Preference number: 4 (lower is better)
Translates to: TERPTSIITVFLPAHCLYLTLMS*CTQNQH
Trigger: ATGTTGATTTTGCGTACACCATGACATCAGCGTTAG...GTACAGACAGTGAGCTGGTAAGAAAACAGTAATTATGCTAGTGGGCCTTTCAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR TCA 90 bp ACTGAAAGGCCCACTAGCATAATTACTGTTTTCTTACCAGCTCACTGTCTGTACACGCAAAATCAACATTaGTCTCTAAGTGAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: TERPTSIITVFLPAHCLYTQNQH*SLSERG
Trigger: TCCTCTTTCACTTAGAGATCAATGTTGATTTTGCGT...GTACAGACAGTGAGCTGGTAAGAAAACAGTAATTATGCTAGTGGGCCTTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
3UTR CAA 72 bp AAGGAAGGATACTCTTCAGATATAGAAGATATGCCTTaGATTAATCATTCTACCCTATTGCCATTCCAAGCA +
Preference number: 4 (lower is better)
Translates to: KEGYSSDIEDMP*INHSTLLPFQA
Trigger: TGCTTGGAATGGCAATAGGGTAGAATGATTAATCAAAGGCATATCTTCTATATCTGAAGAGTATCCTTCCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS TCA 90 bp GCGCGGGCGCTGGGAGGGAGACCAGGGCGCAGTTCCGGGCGCGTCTaGGCGGTTCTCGAGGCGTTCTCGCCTCGGTCTCTGGCGAGTGCA +
Preference number: 5 (lower is better)
Translates to: ARALGGRPGRSSGRV*AVLEAFSPRSLASA
Trigger: TGCACTCGCCAGAGACCGAGGCGAGAACGCCTCGAGAACCGCTCAGACGCGCCCGGAACTGCGCCCTGGTCTCCCTCCCAGCGCCCGCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571058.5
CDS-3UTR CAA 90 bp CGCCGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGGGCCCCCTCGCTCAGTaGGCCGACCATGGCTCCACC +
Preference number: 5 (lower is better)
Translates to: RRTAGVRRRDVRPMAGGVGPLAQ*ADHGST
Trigger: GGTGGAGCCATGGTCGGCCAACTGAGCGAGGGGGCC...CACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCGGCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS GCA 90 bp ACCCATTCCCGAGCTTCCATTCTGCGGCTGGGGCCTGCTGCTTGCTaGTGGGCTGGCTGCTGGCGCTGGAGGAGCTACTTGCGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: THSRASILRLGPAAC*WAGCWRWRSYLRLP
Trigger: GGGCAGCCGCAAGTAGCTCCTCCAGCGCCAGCAGCCAGCCCAGCAGCAAGCAGCAGGCCCCAGCCGCAGAATGGAAGCTCGGGAATGGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254719.10
ENST00000570451.5
ENST00000573924.1
CDS CCA 90 bp CATTCCCGAGCTTCCATTCTGCGGCTGGGGCCTGCTGCTTGCTGCTaGGCTGGCTGCTGGCGCTGGAGGAGCTACTTGCGGCTGCCCGAG +
Preference number: 5 (lower is better)
Translates to: HSRASILRLGPAACC*AGCWRWRSYLRLPE
Trigger: CTCGGGCAGCCGCAAGTAGCTCCTCCAGCGCCAGCAGCCAGCCCAGCAGCAAGCAGCAGGCCCCAGCCGCAGAATGGAAGCTCGGGAATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254719.10
ENST00000570451.5
ENST00000573924.1
CDS GCA 90 bp AGAACCCATTCCCGAGCTTCCATTCTGCGGCTGGGGCCTGCTGCTTaGTGCTGGGCTGGCTGCTGGCGCTGGAGGAGCTACTTGCGGCTG +
Preference number: 5 (lower is better)
Translates to: RTHSRASILRLGPAA*CWAGCWRWRSYLRL
Trigger: CAGCCGCAAGTAGCTCCTCCAGCGCCAGCAGCCAGCCCAGCAGCAAGCAGCAGGCCCCAGCCGCAGAATGGAAGCTCGGGAATGGGTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254719.10
ENST00000570451.5
ENST00000573924.1
CDS-3UTR CAA 90 bp CGCCGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGCAAACTTCTGCCCGATaGGCACTGCTCCTCTCACAT +
Preference number: 5 (lower is better)
Translates to: RRTAGVRRRDVRPMAGGVQTSAR*ALLLSH
Trigger: ATGTGAGAGGAGCAGTGCCAATCGGGCAGAAGTTTG...CACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CAA 90 bp CGCCGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGATTTACCTTGTCGCCTaGGCCCAGGTTCTCGGATTT +
Preference number: 5 (lower is better)
Translates to: RRTAGVRRRDVRPMAGGVIYLVA*AQVLGF
Trigger: AAATCCGAGAACCTGGGCCAAGGCGACAAGGTAAAT...CACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574049.1
CDS CCA 90 bp GCCTTAGAAACAGTAGAACCCATTCCCGAGCTTCCATTCTGCGGCTaGGGCCTGCTGCTTGCTGCTGGGCTGGCTGCTGGCGCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: ALETVEPIPELPFCG*GLLLAAGLAAGAGG
Trigger: TCCTCCAGCGCCAGCAGCCAGCCCAGCAGCAAGCAGCAGGCCCCAGCCGCAGAATGGAAGCTCGGGAATGGGTTCTACTGTTTCTAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254719.10
ENST00000570451.5
ENST00000573924.1
CDS-3UTR CAA 90 bp CGCCGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTACAAGGTTTTCCAGTaGGTGTTACTCCCTCCGACT +
Preference number: 5 (lower is better)
Translates to: RRTAGVRRRDVRPMAGGVYKVFQ*VLLPPT
Trigger: AGTCGGAGGGAGTAACACCAACTGGAAAACCTTGTA...CACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CAA 90 bp GGAAATCTGTTAGAAACAGCCTCCTCGAGGGAGCCCTCCCCCTGGCACTGCCCCGCAATGGGCACCACTTaGGACTGTGTTCCCCCAGAA +
Preference number: 5 (lower is better)
Translates to: GNLLETASSREPSPWHCPAMGTT*DCVPPE
Trigger: TTCTGGGGGAACACAGTCCAAAGTGGTGCCCATTGC...GGGGCAGTGCCAGGGGGAGGGCTCCCTCGAGGAGGCTGTTTCTAACAGATTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR CAA 90 bp CTGTCCTGGTACCACGGCTGGTCAGGCCTCTTCACTGTGTGGACAGACACGTGGGAGACTCGGGCTCCTTaGATAGCCAACACGGGCTGT +
Preference number: 5 (lower is better)
Translates to: LSWYHGWSGLFTVWTDTWETRAP*IANTGC
Trigger: ACAGCCCGTGTTGGCTATCAAAGGAGCCCGAGTCTC...CCACGTGTCTGTCCACACAGTGAAGAGGCCTGACCAGCCGTGGTACCAGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CAA 90 bp CGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGTACAAGGTTTTCCAGTaGGTGTTACTCCCTCCGACT +
Preference number: 5 (lower is better)
Translates to: RTAGVRRRDVRPMAGGVLYKVFQ*VLLPPT
Trigger: AGTCGGAGGGAGTAACACCAACTGGAAAACCTTGTA...CAACACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CAA 90 bp CGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGCATTTCAAAGCGTGGTaGGTGTTAGACTGCTGCGTA +
Preference number: 5 (lower is better)
Translates to: RTAGVRRRDVRPMAGGVLHFKAW*VLDCCV
Trigger: TACGCAGCAGTCTAACACCAACCACGCTTTGAAATG...CAACACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CAA 90 bp GTCCACCATCAAGAGCCTCTGCACTGTGTAGCTAACATGGGATCGTCACACGGACGCTGGAGGAGCTACTaGCGGCTGCCCGAGTCCTTC +
Preference number: 5 (lower is better)
Translates to: VHHQEPLHCVANMGSSHGRWRSY*RLPESF
Trigger: GAAGGACTCGGGCAGCCGCAAGTAGCTCCTCCAGCG...TCCGTGTGACGATCCCATGTTAGCTACACAGTGCAGAGGCTCTTGATGGTGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR CAA 90 bp CGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGTTCCATTCTGCCTATTaGCAAACTTCTGCCCGATTG +
Preference number: 5 (lower is better)
Translates to: RTAGVRRRDVRPMAGGVLFHSAY*QTSARL
Trigger: CAATCGGGCAGAAGTTTGCAAATAGGCAGAATGGAA...CAACACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CAA 90 bp CTGTCCTGGTACCACGGCTGGTCAGGCCTCTTCACTGTGTGGACAGACACGTGGACAGTTGCTGGACAATaGTTCTTCCTCCACGAGAGG +
Preference number: 5 (lower is better)
Translates to: LSWYHGWSGLFTVWTDTWTVAGQ*FFLHER
Trigger: CCTCTCGTGGAGGAAGAACAATTGTCCAGCAACTGT...CCACGTGTCTGTCCACACAGTGAAGAGGCCTGACCAGCCGTGGTACCAGGACAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR CAA 90 bp GGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGCAGCCACCGGATAGATAATCAAACTTCTGCCCGATaGGCACTGCTCCTCTCACAT +
Preference number: 5 (lower is better)
Translates to: GEMCGQWQAVCCSHRIDNQTSAR*ALLLSH
Trigger: ATGTGAGAGGAGCAGTGCCAATCGGGCAGAAGTTTG...ATTATCTATCCGGTGGCTGCAACACACCGCCTGCCATTGGCCGCACATCTCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CAA 90 bp GGAAATCTGTTAGAAACAGCCTCCTCGAGGGAGCCCTCCCCCTGGCACTGCCCCAGTGAGTCTTTCGACTaGTTCTCGAGGTCATCAATC +
Preference number: 5 (lower is better)
Translates to: GNLLETASSREPSPWHCPSESFD*FSRSSI
Trigger: GATTGATGACCTCGAGAACAAGTCGAAAGACTCACT...GGGGCAGTGCCAGGGGGAGGGCTCCCTCGAGGAGGCTGTTTCTAACAGATTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CAA 90 bp AAATGGCTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGGTCCGGCTTGTCGCCTaGGCCCAGGTTCTCGGATTT +
Preference number: 5 (lower is better)
Translates to: KWLRPQSETEMRPSYHLLVRLVA*AQVLGF
Trigger: AAATCCGAGAACCTGGGCCAAGGCGACAAGCCGGAC...CAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAGCCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR CAA 90 bp GGTTCCCAATCACATCCACGGAGACGTGCTGGTTTCATCACGCTGGCCACTGAGCTGAGTCGGGCAGGCTaGGTACATGCAGTTCTCTTT +
Preference number: 5 (lower is better)
Translates to: GSQSHPRRRAGFITLATELSRAG*VHAVLF
Trigger: AAAGAGAACTGCATGTACCAAGCCTGCCCGACTCAG...CTCAGTGGCCAGCGTGATGAAACCAGCACGTCTCCGTGGATGTGATTGGGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR CAA 90 bp CGCACTGCCGGGGTACGACGGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGCACCCACTGATTCTCTaGAAAATCTGCAATATTTAC +
Preference number: 5 (lower is better)
Translates to: RTAGVRRRDVRPMAGGVLHPLIL*KICNIY
Trigger: GTAAATATTGCAGATTTTCAAGAGAATCAGTGGGTG...CAACACACCGCCTGCCATTGGCCGCACATCTCGCCGTCGTACCCCGGCAGTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CAA 90 bp GGAGTCCCTCTGTGTCTGTCCTCAGGAACGGAAGTCATCCCGTCTAGGGCTGGCAGGATCATGCGGTACTaGAAATTGGGAAATTCGGTG +
Preference number: 5 (lower is better)
Translates to: GVPLCLSSGTEVIPSRAGRIMRY*KLGNSV
Trigger: CACCGAATTTCCCAATTTCAAGTACCGCATGATCCT...GCCAGCCCTAGACGGGATGACTTCCGTTCCTGAGGACAGACACAGAGGGACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR CAA 90 bp GGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGCAGCCACCGGATAGATAATCTTCCCAGCCACAATTaGTCAATCCAGAAGAGGGTT +
Preference number: 5 (lower is better)
Translates to: GEMCGQWQAVCCSHRIDNLPSHN*SIQKRV
Trigger: AACCCTCTTCTGGATTGACAAATTGTGGCTGGGAAG...ATTATCTATCCGGTGGCTGCAACACACCGCCTGCCATTGGCCGCACATCTCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CAA 90 bp GGTTCCCAATCACATCCACGGAGACGTGCTGGTTTCATCACGCTGGCCACTGAGACAGCTGTGAACTGCTaGTTAGCAATCTTCAGGGTG +
Preference number: 5 (lower is better)
Translates to: GSQSHPRRRAGFITLATETAVNC*LAIFRV
Trigger: CACCCTGAAGATTGCTAACAAGCAGTTCACAGCTGT...CTCAGTGGCCAGCGTGATGAAACCAGCACGTCTCCGTGGATGTGATTGGGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CAA 90 bp CTGTCCTGGTACCACGGCTGGTCAGGCCTCTTCACTGTGTGGACAGACACGTGGTTGGCAACTTCTCTGTaGTTAGACCTCACTGTGATT +
Preference number: 5 (lower is better)
Translates to: LSWYHGWSGLFTVWTDTWLATSL*LDLTVI
Trigger: AATCACAGTGAGGTCTAACAACAGAGAAGTTGCCAA...CCACGTGTCTGTCCACACAGTGAAGAGGCCTGACCAGCCGTGGTACCAGGACAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CAA 90 bp AGACAGACAGGACACCATCACTCCCCATATCCAAAAGCCTCCGCAGGCGGCATGCATTTCAAAGCGTGGTaGGTGTTAGACTGCTGCGTA +
Preference number: 5 (lower is better)
Translates to: RQTGHHHSPYPKASAGGMHFKAW*VLDCCV
Trigger: TACGCAGCAGTCTAACACCAACCACGCTTTGAAATG...CATGCCGCCTGCGGAGGCTTTTGGATATGGGGAGTGATGGTGTCCTGTCTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS TCA 90 bp AAGCTTATAGGCCTCTGGGATGTCAGGATTCGCAATGATAGTGCTTaGAGACAGCACGGAGAGGCTCCGTCCACCGAAATCAGAGACTCG +
Preference number: 5 (lower is better)
Translates to: KLIGLWDVRIRNDSA*RQHGEAPSTEIRDS
Trigger: CGAGTCTCTGATTTCGGTGGACGGAGCCTCTCCGTGCTGTCTTCAAGCACTATCATTGCGAATCCTGACATCCCAGAGGCCTATAAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS CCA 90 bp TGGGCACCACTTTGGACTGTGTTCCCCCAGAAGTGTGTGACAGGCTaGGACCTGCAGCTTTTCCAAATGTCTTTGAAGCACCATAAGCCT +
Preference number: 5 (lower is better)
Translates to: WAPLWTVFPQKCVTG*DLQLFQMSLKHHKP
Trigger: AGGCTTATGGTGCTTCAAAGACATTTGGAAAAGCTGCAGGTCCCAGCCTGTCACACACTTCTGGGGGAACACAGTCCAAAGTGGTGCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000573924.1
CDS-3UTR CAA 90 bp GGTTCCCAATCACATCCACGGAGACGTGCTGGTTTCATCACGCTGGCCACTGAGTTGTCCACTTGCTCATaGAAAGCTGTAGCTCGGATT +
Preference number: 5 (lower is better)
Translates to: GSQSHPRRRAGFITLATELSTCS*KAVARI
Trigger: AATCCGAGCTACAGCTTTCAATGAGCAAGTGGACAA...CTCAGTGGCCAGCGTGATGAAACCAGCACGTCTCCGTGGATGTGATTGGGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR CAA 90 bp GGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGCAGCCACCGGATAGATAATAAAGAACTTGTCCACTaGCTCATTGAAAGCTGTAGC +
Preference number: 5 (lower is better)
Translates to: GEMCGQWQAVCCSHRIDNKELVH*LIESCS
Trigger: GCTACAGCTTTCAATGAGCAAGTGGACAAGTTCTTT...ATTATCTATCCGGTGGCTGCAACACACCGCCTGCCATTGGCCGCACATCTCGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR CAA 90 bp AGCCGCTCGGATTTCCTTAGGGGACGGCAAGTCAATGCTTATCAGCGGTCCTCAACAGCTGTGAACTGCTaGTTAGCAATCTTCAGGGTG +
Preference number: 5 (lower is better)
Translates to: SRSDFLRGRQVNAYQRSSTAVNC*LAIFRV
Trigger: CACCCTGAAGATTGCTAACAAGCAGTTCACAGCTGT...TGAGGACCGCTGATAAGCATTGACTTGCCGTCCCCTAAGGAAATCCGAGCGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CAA 90 bp GGTTCCCAATCACATCCACGGAGACGTGCTGGTTTCATCACGCTGGCCACTGAGAGTGAGTCTTTCGACTaGTTCTCGAGGTCATCAATC +
Preference number: 5 (lower is better)
Translates to: GSQSHPRRRAGFITLATESESFD*FSRSSI
Trigger: GATTGATGACCTCGAGAACAAGTCGAAAGACTCACT...CTCAGTGGCCAGCGTGATGAAACCAGCACGTCTCCGTGGATGTGATTGGGAACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CAA 90 bp CTGTCCTGGTACCACGGCTGGTCAGGCCTCTTCACTGTGTGGACAGACACGTGGAATCATTCTACCCTATaGCCATTCCAAGCATTACCA +
Preference number: 5 (lower is better)
Translates to: LSWYHGWSGLFTVWTDTWNHSTL*PFQALP
Trigger: TGGTAATGCTTGGAATGGCAATAGGGTAGAATGATT...CCACGTGTCTGTCCACACAGTGAAGAGGCCTGACCAGCCGTGGTACCAGGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS GCA 90 bp AACATGGGATCGTCACACGGAGGTGGGAGGAAATCGATTCCATTCTaGCTATTTGCAAACTTCTGCCCGATTGGCACTGCTCCTCTCACA +
Preference number: 5 (lower is better)
Translates to: NMGSSHGGGRKSIPF*LFANFCPIGTAPLT
Trigger: TGTGAGAGGAGCAGTGCCAATCGGGCAGAAGTTTGCAAATAGGCAGAATGGAATCGATTTCCTCCCACCTCCGTGTGACGATCCCATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254719.10
ENST00000573994.1
ENST00000574049.1
CDS CCA 90 bp AGTTGGTGTTACTCCCTCCGACTCCGCCGCTCTTTAGATCAGAGATaGAAACACCATCTAAGGCTTGTCCTTCTGCGTCAAACCATCCAC +
Preference number: 5 (lower is better)
Translates to: SWCYSLRLRRSLDQR*KHHLRLVLLRQTIH
Trigger: GTGGATGGTTTGACGCAGAAGGACAAGCCTTAGATGGTGTTTCCATCTCTGATCTAAAGAGCGGCGGAGTCGGAGGGAGTAACACCAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CAA 90 bp GTCCACCATCAAGAGCCTCTGCACTGTGTAGCTAACATGGGATCGTCACACGGAATGCGGTACTTGAAATaGGGAAATTCGGTGTCGCAC +
Preference number: 5 (lower is better)
Translates to: VHHQEPLHCVANMGSSHGMRYLK*GNSVSH
Trigger: GTGCGACACCGAATTTCCCAATTTCAAGTACCGCAT...TCCGTGTGACGATCCCATGTTAGCTACACAGTGCAGAGGCTCTTGATGGTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR CAA 90 bp GGTTCCCAATCACATCCACGGAGACGTGCTGGTTTCATCACGCTGGCCACTGAGAAGATAAGCAGCATTTaGTCCAAGGATAGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: GSQSHPRRRAGFITLATEKISSI*SKDSFS
Trigger: GCTGAAGCTATCCTTGGACAAAATGCTGCTTATCTT...CTCAGTGGCCAGCGTGATGAAACCAGCACGTCTCCGTGGATGTGATTGGGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS GCA 90 bp TATTTGCAAACTTCTGCCCGATTGGCACTGCTCCTCTCACATCAATaGACTTCTCCTGATGCTCATGACCAGCCTTCGGCCATACTCTCT +
Preference number: 5 (lower is better)
Translates to: YLQTSARLALLLSHQ*TSPDAHDQPSAILS
Trigger: AGAGAGTATGGCCGAAGGCTGGTCATGAGCATCAGGAGAAGTGCATTGATGTGAGAGGAGCAGTGCCAATCGGGCAGAAGTTTGCAAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254719.10
ENST00000573994.1
ENST00000574049.1
CDS-3UTR CAA 90 bp GGCGAGATGTGCGGCCAATGGCAGGCGGTGTGTTGCAGCCACCGGATAGATAATATAAGAGGAAAGAACTaGTCCACTTGCTCATTGAAA +
Preference number: 5 (lower is better)
Translates to: GEMCGQWQAVCCSHRIDNIRGKN*STCSLK
Trigger: TTTCAATGAGCAAGTGGACAAGTTCTTTCCTCTTAT...ATTATCTATCCGGTGGCTGCAACACACCGCCTGCCATTGGCCGCACATCTCGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR CAA 90 bp AGCCGCTCGGATTTCCTTAGGGGACGGCAAGTCAATGCTTATCAGCGGTCCTCATTGGCAACTTCTCTGTaGTTAGACCTCACTGTGATT +
Preference number: 5 (lower is better)
Translates to: SRSDFLRGRQVNAYQRSSLATSL*LDLTVI
Trigger: AATCACAGTGAGGTCTAACAACAGAGAAGTTGCCAA...TGAGGACCGCTGATAAGCATTGACTTGCCGTCCCCTAAGGAAATCCGAGCGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CAA 90 bp CTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGAGACTACCCAGGTTCTCGGATTaGACCTCATACAAGGTTTTC +
Preference number: 5 (lower is better)
Translates to: LRPQSETEMRPSYHLLRLPRFSD*TSYKVF
Trigger: GAAAACCTTGTATGAGGTCAAATCCGAGAACCTGGG...TAGTCTCAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CAA 90 bp GCTAACATGGGATCGTCACACGGAGGTGGGAGGAAATCGATTCCATTCTGCCTACCCAGGTTCTCGGATTaGACCTCATACAAGGTTTTC +
Preference number: 5 (lower is better)
Translates to: ANMGSSHGGGRKSIPFCLPRFSD*TSYKVF
Trigger: GAAAACCTTGTATGAGGTCAAATCCGAGAACCTGGG...TAGGCAGAATGGAATCGATTTCCTCCCACCTCCGTGTGACGATCCCATGTTAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CAA 90 bp GGTTCCCAATCACATCCACGGAGACGTGCTGGTTTCATCACGCTGGCCACTGAGAATCATTCTACCCTATaGCCATTCCAAGCATTACCA +
Preference number: 5 (lower is better)
Translates to: GSQSHPRRRAGFITLATENHSTL*PFQALP
Trigger: TGGTAATGCTTGGAATGGCAATAGGGTAGAATGATT...CTCAGTGGCCAGCGTGATGAAACCAGCACGTCTCCGTGGATGTGATTGGGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CAA 90 bp GCTAACATGGGATCGTCACACGGAGGTGGGAGGAAATCGATTCCATTCTGCCTAACCTTGGGCGGCATATaGCCAAAGAAACATGAGTCA +
Preference number: 5 (lower is better)
Translates to: ANMGSSHGGGRKSIPFCLTLGGI*PKKHES
Trigger: TGACTCATGTTTCTTTGGCAATATGCCGCCCAAGGT...TAGGCAGAATGGAATCGATTTCCTCCCACCTCCGTGTGACGATCCCATGTTAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CAA 90 bp CTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGAGACTAACCTTGGGCGGCATATaGCCAAAGAAACATGAGTCA +
Preference number: 5 (lower is better)
Translates to: LRPQSETEMRPSYHLLRLTLGGI*PKKHES
Trigger: TGACTCATGTTTCTTTGGCAATATGCCGCCCAAGGT...TAGTCTCAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS GCA 90 bp GAGCTACTTGCGGCTGCCCGAGTCCTTCATTATAGGGCACTGGATTaGCAATCTTCACTCCAACTGCTTCAGCTGACTTCAAAACTTCTA +
Preference number: 5 (lower is better)
Translates to: ELLAAARVLHYRALD*QSSLQLLQLTSKLL
Trigger: TAGAAGTTTTGAAGTCAGCTGAAGCAGTTGGAGTGAAGATTGGCAATCCAGTGCCCTATAATGAAGGACTCGGGCAGCCGCAAGTAGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254719.10
ENST00000570451.5
ENST00000571058.5
CDS GCA 90 bp ATCGATTCCATTCTGCCTATTTGCAAACTTCTGCCCGATTGGCACTaGTCCTCTCACATCAATGCACTTCTCCTGATGCTCATGACCAGC +
Preference number: 5 (lower is better)
Translates to: IDSILPICKLLPDWH*SSHINALLLMLMTS
Trigger: GCTGGTCATGAGCATCAGGAGAAGTGCATTGATGTGAGAGGAGCAGTGCCAATCGGGCAGAAGTTTGCAAATAGGCAGAATGGAATCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254719.10
ENST00000573994.1
ENST00000574049.1
CDS-3UTR CAA 90 bp GCTAACATGGGATCGTCACACGGAGGTGGGAGGAAATCGATTCCATTCTGCCTAACGGATGTTGATGACTaGGAGGATGGGCTTTATGTT +
Preference number: 5 (lower is better)
Translates to: ANMGSSHGGGRKSIPFCLTDVDD*EDGLYV
Trigger: AACATAAAGCCCATCCTCCAAGTCATCAACATCCGT...TAGGCAGAATGGAATCGATTTCCTCCCACCTCCGTGTGACGATCCCATGTTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR CAA 90 bp AAACTGTGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAGTAATGGGACGGATGTaGATGACTTGGAGGATGGGC +
Preference number: 5 (lower is better)
Translates to: KLWARIYLGNPQGPKSLKVMGRM*MTWRMG
Trigger: GCCCATCCTCCAAGTCATCAACATCCGTCCCATTAC...TTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCACAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR CAA 90 bp ACTGAAAGGCCCACTAGCATAATTACTGTTTTCTTACCAGCTCACTGTCTGTACGAGACTCGGGCTCCTTaGATAGCCAACACGGGCTGT +
Preference number: 5 (lower is better)
Translates to: TERPTSIITVFLPAHCLYETRAP*IANTGC
Trigger: ACAGCCCGTGTTGGCTATCAAAGGAGCCCGAGTCTC...GTACAGACAGTGAGCTGGTAAGAAAACAGTAATTATGCTAGTGGGCCTTTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CAA 90 bp CTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGAGACTATACATGCAGTTCTCTTaGCGAAGATACACCACTGTG +
Preference number: 5 (lower is better)
Translates to: LRPQSETEMRPSYHLLRLYMQFS*RRYTTV
Trigger: CACAGTGGTGTATCTTCGCAAAGAGAACTGCATGTA...TAGTCTCAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR CAA 90 bp TGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAAGCCCACTTCCCAGCCACAATTaGTCAATCCAGAAGAGGGTT +
Preference number: 5 (lower is better)
Translates to: WARIYLGNPQGPKSLKSPLPSHN*SIQKRV
Trigger: AACCCTCTTCTGGATTGACAAATTGTGGCTGGGAAG...TGGGCTTTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS CCA 90 bp GAGGAAATCGATTCCATTCTGCCTATTTGCAAACTTCTGCCCGATTaGCACTGCTCCTCTCACATCAATGCACTTCTCCTGATGCTCATG +
Preference number: 5 (lower is better)
Translates to: EEIDSILPICKLLPD*HCSSHINALLLMLM
Trigger: CATGAGCATCAGGAGAAGTGCATTGATGTGAGAGGAGCAGTGCCAATCGGGCAGAAGTTTGCAAATAGGCAGAATGGAATCGATTTCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254719.10
ENST00000573994.1
ENST00000574049.1
CDS-3UTR CAA 90 bp TGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAAGCCCAATCTGGCATACACAGTaGCTGGACAATTGTTCTTCC +
Preference number: 5 (lower is better)
Translates to: WARIYLGNPQGPKSLKSPIWHTQ*LDNCSS
Trigger: GGAAGAACAATTGTCCAGCAACTGTGTATGCCAGAT...TGGGCTTTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS-3UTR CAA 90 bp AGCCGCTCGGATTTCCTTAGGGGACGGCAAGTCAATGCTTATCAGCGGTCCTCAAATGCCTGTTCATTCTaGTCTTTTAATTCCCCAAGA +
Preference number: 5 (lower is better)
Translates to: SRSDFLRGRQVNAYQRSSNACSF*SFNSPR
Trigger: TCTTGGGGAATTAAAAGACAAGAATGAACAGGCATT...TGAGGACCGCTGATAAGCATTGACTTGCCGTCCCCTAAGGAAATCCGAGCGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CAA 90 bp TGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAAGCCCATTCCATTCTGCCTATTaGCAAACTTCTGCCCGATTG +
Preference number: 5 (lower is better)
Translates to: WARIYLGNPQGPKSLKSPFHSAY*QTSARL
Trigger: CAATCGGGCAGAAGTTTGCAAATAGGCAGAATGGAA...TGGGCTTTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CAA 90 bp CTGAGGCCTCAGTCAGAGACTGAAATGCGACCCAGTTACCATCTCCTGAGACTATCTATAAATAAAACCTaGGGCGGCATATTGCCAAAG +
Preference number: 5 (lower is better)
Translates to: LRPQSETEMRPSYHLLRLSINKT*GGILPK
Trigger: CTTTGGCAATATGCCGCCCAAGGTTTTATTTATAGA...TAGTCTCAGGAGATGGTAACTGGGTCGCATTTCAGTCTCTGACTGAGGCCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CAA 90 bp GCTAACATGGGATCGTCACACGGAGGTGGGAGGAAATCGATTCCATTCTGCCTATCTATAAATAAAACCTaGGGCGGCATATTGCCAAAG +
Preference number: 5 (lower is better)
Translates to: ANMGSSHGGGRKSIPFCLSINKT*GGILPK
Trigger: CTTTGGCAATATGCCGCCCAAGGTTTTATTTATAGA...TAGGCAGAATGGAATCGATTTCCTCCCACCTCCGTGTGACGATCCCATGTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CAA 90 bp ACTGAAAGGCCCACTAGCATAATTACTGTTTTCTTACCAGCTCACTGTCTGTACTCTGCAATATTTACCTaGTCGCCTTGGCCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: TERPTSIITVFLPAHCLYSAIFT*SPWPRF
Trigger: GAACCTGGGCCAAGGCGACAAGGTAAATATTGCAGA...GTACAGACAGTGAGCTGGTAAGAAAACAGTAATTATGCTAGTGGGCCTTTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574049.1
CDS-3UTR CAA 90 bp AAACTGTGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAAAGATAAGCAGCATTTaGTCCAAGGATAGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: KLWARIYLGNPQGPKSLKKISSI*SKDSFS
Trigger: GCTGAAGCTATCCTTGGACAAAATGCTGCTTATCTT...TTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCACAGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS-3UTR CAA 90 bp AAACTGTGGGCCAGAATCTATTTAGGCAACCCGCAGGGACCAAAATCTCTGAAAAATGCCTGTTCATTCTaGTCTTTTAATTCCCCAAGA +
Preference number: 5 (lower is better)
Translates to: KLWARIYLGNPQGPKSLKNACSF*SFNSPR
Trigger: TCTTGGGGAATTAAAAGACAAGAATGAACAGGCATT...TTTCAGAGATTTTGGTCCCTGCGGGTTGCCTAAATAGATTCTGGCCCACAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS CCA 72 bp GCTTCCCCACCCGGGTCCCGCGCGCTGCGCAGTTATTaGCCCGAGAAGTTGCGCGCACCGCTCCCGCCCCCG +
Preference number: 6 (lower is better)
Translates to: ASPPGSRALRSY*PEKLRAPLPPP
Trigger: CGGGGGCGGGAGCGGTGCGCGCAACTTCTCGGGCCAATAACTGCGCAGCGCGCGGGACCCGGGTGGGGAAGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570451.5
CDS CAA 72 bp AGCTTCCCCACCCGGGTCCCGCGCGCTGCGCAGTTATaGGCCCGAGAAGTTGCGCGCACCGCTCCCGCCCCC +
Preference number: 6 (lower is better)
Translates to: SFPTRVPRAAQL*AREVARTAPAP
Trigger: GGGGGCGGGAGCGGTGCGCGCAACTTCTCGGGCCAATAACTGCGCAGCGCGCGGGACCCGGGTGGGGAAGCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570451.5
CDS GCA 72 bp CAACAGCTCCAGCTTCCCCACCCGGGTCCCGCGCGCTaGGCAGTTATTGGCCCGAGAAGTTGCGCGCACCGC +
Preference number: 6 (lower is better)
Translates to: QQLQLPHPGPAR*AVIGPRSCAHR
Trigger: GCGGTGCGCGCAACTTCTCGGGCCAATAACTGCGCAGCGCGCGGGACCCGGGTGGGGAAGCTGGAGCTGTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570451.5
CDS GCA 72 bp CCATTCCCGAGCTTCCATTCTGCGGCTGGGGCCTGCTaGTTGCTGCTGGGCTGGCTGCTGGCGCTGGAGGAG +
Preference number: 6 (lower is better)
Translates to: PFPSFHSAAGAC*LLLGWLLALEE
Trigger: CTCCTCCAGCGCCAGCAGCCAGCCCAGCAGCAAGCAGCAGGCCCCAGCCGCAGAATGGAAGCTCGGGAATGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254719.10
ENST00000570451.5
ENST00000573924.1
CDS GCA 72 bp AACCCATTCCCGAGCTTCCATTCTGCGGCTGGGGCCTaGTGCTTGCTGCTGGGCTGGCTGCTGGCGCTGGAG +
Preference number: 6 (lower is better)
Translates to: NPFPSFHSAAGA*CLLLGWLLALE
Trigger: CTCCAGCGCCAGCAGCCAGCCCAGCAGCAAGCAGCAGGCCCCAGCCGCAGAATGGAAGCTCGGGAATGGGTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254719.10
ENST00000570451.5
ENST00000573924.1
CDS CAA 72 bp TTCCCGAGCTTCCATTCTGCGGCTGGGGCCTGCTGCTaGCTGCTGGGCTGGCTGCTGGCGCTGGAGGAGCTA +
Preference number: 6 (lower is better)
Translates to: FPSFHSAAGACC*LLGWLLALEEL
Trigger: TAGCTCCTCCAGCGCCAGCAGCCAGCCCAGCAGCAAGCAGCAGGCCCCAGCCGCAGAATGGAAGCTCGGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000254719.10
ENST00000570451.5
ENST00000573924.1
CDS CAA 72 bp CTTCTGCATGATGGCCGCAATGGCCCCCTCGCTCAGTaGGCCGACCATGGCTCCACCGCCAAGACTTCCCCG +
Preference number: 6 (lower is better)
Translates to: LLHDGRNGPLAQ*ADHGSTAKTSP
Trigger: CGGGGAAGTCTTGGCGGTGGAGCCATGGTCGGCCAACTGAGCGAGGGGGCCATTGCGGCCATCATGCAGAAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS CCA 72 bp ACAGTAGAACCCATTCCCGAGCTTCCATTCTGCGGCTaGGGCCTGCTGCTTGCTGCTGGGCTGGCTGCTGGC +
Preference number: 6 (lower is better)
Translates to: TVEPIPELPFCG*GLLLAAGLAAG
Trigger: GCCAGCAGCCAGCCCAGCAGCAAGCAGCAGGCCCCAGCCGCAGAATGGAAGCTCGGGAATGGGTTCTACTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254719.10
ENST00000570451.5
ENST00000573924.1
CDS CAA 90 bp CCTGCTGCTTGCTGCTGGGCTGGCTGCTGGCGCTGGAGGAGCTACTaGCGGCTGCCCGAGTCCTTCATTATAGGGCACTGGATTGCCAAT +
Preference number: 6 (lower is better)
Translates to: PAACCWAGCWRWRSY*RLPESFIIGHWIAN
Trigger: ATTGGCAATCCAGTGCCCTATAATGAAGGACTCGGGCAGCCGCAAGTAGCTCCTCCAGCGCCAGCAGCCAGCCCAGCAGCAAGCAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000570451.5
CDS CCA 72 bp TCTGAGCGGTTCTCGAGGCGTTCTCGCCTCGGTCTCTaGCGAGTGCACGGGTTGGTATCCCAGAGGAGGTTA +
Preference number: 6 (lower is better)
Translates to: SERFSRRSRLGL*RVHGLVSQRRL
Trigger: TAACCTCCTCTGGGATACCAACCCGTGCACTCGCCAGAGACCGAGGCGAGAACGCCTCGAGAACCGCTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000571058.5
CDS CAA 90 bp CCTGCTGCTTGCTGCTGGGCTGGCTGCTGGCGCTGGAGGAGCTACTaGCGGCTGCCCGAGTCCTGCTTAGAATTGATAGCCTTCAGTGTT +
Preference number: 6 (lower is better)
Translates to: PAACCWAGCWRWRSY*RLPESCLELIAFSV
Trigger: AACACTGAAGGCTATCAATTCTAAGCAGGACTCGGGCAGCCGCAAGTAGCTCCTCCAGCGCCAGCAGCCAGCCCAGCAGCAAGCAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000573924.1
CDS TCA 72 bp GGCCTCTGGGATGTCAGGATTCGCAATGATAGTGCTTaGAGACAGCACGGAGAGGCTCCGTCCACCGAAATC +
Preference number: 6 (lower is better)
Translates to: GLWDVRIRNDSA*RQHGEAPSTEI
Trigger: GATTTCGGTGGACGGAGCCTCTCCGTGCTGTCTTCAAGCACTATCATTGCGAATCCTGACATCCCAGAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS TCA 72 bp CACGAGCACAAATGGTCCACTTGGACTGGTAAGGAGTaGGGCTGGCAATGGGCACCACTTTGGACTGTGTTC +
Preference number: 6 (lower is better)
Translates to: HEHKWSTWTGKE*GWQWAPLWTVF
Trigger: GAACACAGTCCAAAGTGGTGCCCATTGCCAGCCTCACTCCTTACCAGTCCAAGTGGACCATTTGTGCTCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000573924.1
CDS TCA 72 bp TTCCCTTCCCCTCGGGAGTTGCTCCAGGTACGGATCTaGCTTTTGTTGGTAACACGAGCACAAATGGTCCAC +
Preference number: 6 (lower is better)
Translates to: FPSPRELLQVRI*LLLVTRAQMVH
Trigger: GTGGACCATTTGTGCTCGTGTTACCAACAAAAGTCAGATCCGTACCTGGAGCAACTCCCGAGGGGAAGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000573924.1
CDS GCA 72 bp GCGGCTGCCCGAGTCCTTCATTATAGGGCACTGGATTaGCAATCTTCACTCCAACTGCTTCAGCTGACTTCA +
Preference number: 6 (lower is better)
Translates to: AAARVLHYRALD*QSSLQLLQLTS
Trigger: TGAAGTCAGCTGAAGCAGTTGGAGTGAAGATTGGCAATCCAGTGCCCTATAATGAAGGACTCGGGCAGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254719.10
ENST00000570451.5
ENST00000571058.5
CDS CAA 72 bp AGGCTCCGTCCACCGAAATCAGAGACTCGGGCTCCTTaGATAGCCAACACGGGCTGTCTAGAACCATCAAAT +
Preference number: 6 (lower is better)
Translates to: RLRPPKSETRAP*IANTGCLEPSN
Trigger: ATTTGATGGTTCTAGACAGCCCGTGTTGGCTATCAAAGGAGCCCGAGTCTCTGATTTCGGTGGACGGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS CAA 90 bp AGCACGGAGAGGCTCCGTCCACCGAAATCAGAGACTCGGGCTCCTTaGATAGCCAACACGGGCTGTCTAGAACCATCAAATTTATCAGCA +
Preference number: 6 (lower is better)
Translates to: STERLRPPKSETRAP*IANTGCLEPSNLSA
Trigger: TGCTGATAAATTTGATGGTTCTAGACAGCCCGTGTTGGCTATCAAAGGAGCCCGAGTCTCTGATTTCGGTGGACGGAGCCTCTCCGTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS CAA 90 bp CCTTGGCCCAGGTTCTCGGATTTGACCTCATACAAGGTTTTCCAGTaGGTGTTACTCCCTCCGACTCCGCCGCTCTTTAGATCAGAGATG +
Preference number: 6 (lower is better)
Translates to: PWPRFSDLTSYKVFQ*VLLPPTPPLFRSEM
Trigger: CATCTCTGATCTAAAGAGCGGCGGAGTCGGAGGGAGTAACACCAACTGGAAAACCTTGTATGAGGTCAAATCCGAGAACCTGGGCCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS CAA 90 bp GATCGTCACACGGAGGTGGGAGGAAATCGATTCCATTCTGCCTATTaGCAAACTTCTGCCCGATTGGCACTGCTCCTCTCACATCAATGC +
Preference number: 6 (lower is better)
Translates to: DRHTEVGGNRFHSAY*QTSARLALLLSHQC
Trigger: GCATTGATGTGAGAGGAGCAGTGCCAATCGGGCAGAAGTTTGCAAATAGGCAGAATGGAATCGATTTCCTCCCACCTCCGTGTGACGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254719.10
ENST00000573994.1
ENST00000574049.1
CDS GCA 72 bp TCTTATTGCAGTCCTGAGTCGGGCAGGCTTGGTACATaGAGTTCTCTTTGCGAAGATACACCACTGTGGCCA +
Preference number: 6 (lower is better)
Translates to: SYCSPESGRLGT*SSLCEDTPLWP
Trigger: TGGCCACAGTGGTGTATCTTCGCAAAGAGAACTGCATGTACCAAGCCTGCCCGACTCAGGACTGCAATAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS CCA 72 bp TACTCCCTCCGACTCCGCCGCTCTTTAGATCAGAGATaGAAACACCATCTAAGGCTTGTCCTTCTGCGTCAA +
Preference number: 6 (lower is better)
Translates to: YSLRLRRSLDQR*KHHLRLVLLRQ
Trigger: TTGACGCAGAAGGACAAGCCTTAGATGGTGTTTCCATCTCTGATCTAAAGAGCGGCGGAGTCGGAGGGAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS CAA 72 bp ACGGAGGTGGGAGGAAATCGATTCCATTCTGCCTATTaGCAAACTTCTGCCCGATTGGCACTGCTCCTCTCA +
Preference number: 6 (lower is better)
Translates to: TEVGGNRFHSAY*QTSARLALLLS
Trigger: TGAGAGGAGCAGTGCCAATCGGGCAGAAGTTTGCAAATAGGCAGAATGGAATCGATTTCCTCCCACCTCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254719.10
ENST00000573994.1
ENST00000574049.1
CDS CAA 72 bp AGGTTCTCGGATTTGACCTCATACAAGGTTTTCCAGTaGGTGTTACTCCCTCCGACTCCGCCGCTCTTTAGA +
Preference number: 6 (lower is better)
Translates to: RFSDLTSYKVFQ*VLLPPTPPLFR
Trigger: TCTAAAGAGCGGCGGAGTCGGAGGGAGTAACACCAACTGGAAAACCTTGTATGAGGTCAAATCCGAGAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS CAA 90 bp CTGTTGATCAATCACTTTCTTATTGCAGTCCTGAGTCGGGCAGGCTaGGTACATGCAGTTCTCTTTGCGAAGATACACCACTGTGGCCAC +
Preference number: 6 (lower is better)
Translates to: LLINHFLIAVLSRAG*VHAVLFAKIHHCGH
Trigger: GTGGCCACAGTGGTGTATCTTCGCAAAGAGAACTGCATGTACCAAGCCTGCCCGACTCAGGACTGCAATAAGAAAGTGATTGATCAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS CAA 90 bp GGGAAATTCGGTGTCGCACTTCTCACAGCGGTACAATCCATTCTGTaGATCAATCACTTTCTTATTGCAGTCCTGAGTCGGGCAGGCTTG +
Preference number: 6 (lower is better)
Translates to: GKFGVALLTAVQSIL*INHFLIAVLSRAGL
Trigger: CAAGCCTGCCCGACTCAGGACTGCAATAAGAAAGTGATTGATCAACAGAATGGATTGTACCGCTGTGAGAAGTGCGACACCGAATTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS GCA 72 bp ATTCTGCCTATTTGCAAACTTCTGCCCGATTGGCACTaGTCCTCTCACATCAATGCACTTCTCCTGATGCTC +
Preference number: 6 (lower is better)
Translates to: ILPICKLLPDWH*SSHINALLLML
Trigger: GAGCATCAGGAGAAGTGCATTGATGTGAGAGGAGCAGTGCCAATCGGGCAGAAGTTTGCAAATAGGCAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254719.10
ENST00000573994.1
ENST00000574049.1
CDS CCA 72 bp GATTCCATTCTGCCTATTTGCAAACTTCTGCCCGATTaGCACTGCTCCTCTCACATCAATGCACTTCTCCTG +
Preference number: 6 (lower is better)
Translates to: DSILPICKLLPD*HCSSHINALLL
Trigger: CAGGAGAAGTGCATTGATGTGAGAGGAGCAGTGCCAATCGGGCAGAAGTTTGCAAATAGGCAGAATGGAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254719.10
ENST00000573994.1
ENST00000574049.1
CDS CAA 72 bp CGATTCCATTCTGCCTATTTGCAAACTTCTGCCCGATaGGCACTGCTCCTCTCACATCAATGCACTTCTCCT +
Preference number: 6 (lower is better)
Translates to: RFHSAYLQTSAR*ALLLSHQCTSP
Trigger: AGGAGAAGTGCATTGATGTGAGAGGAGCAGTGCCAATCGGGCAGAAGTTTGCAAATAGGCAGAATGGAATCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254719.10
ENST00000573994.1
ENST00000574049.1
CDS CAA 90 bp GGAGGAAATCGATTCCATTCTGCCTATTTGCAAACTTCTGCCCGATaGGCACTGCTCCTCTCACATCAATGCACTTCTCCTGATGCTCAT +
Preference number: 6 (lower is better)
Translates to: GGNRFHSAYLQTSAR*ALLLSHQCTSPDAH
Trigger: ATGAGCATCAGGAGAAGTGCATTGATGTGAGAGGAGCAGTGCCAATCGGGCAGAAGTTTGCAAATAGGCAGAATGGAATCGATTTCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254719.10
ENST00000573994.1
ENST00000574049.1
CDS GCA 72 bp AGGAAATCGATTCCATTCTGCCTATTTGCAAACTTCTaGCCGATTGGCACTGCTCCTCTCACATCAATGCAC +
Preference number: 6 (lower is better)
Translates to: RKSIPFCLFANF*PIGTAPLTSMH
Trigger: GTGCATTGATGTGAGAGGAGCAGTGCCAATCGGGCAGAAGTTTGCAAATAGGCAGAATGGAATCGATTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000254719.10
ENST00000573994.1
ENST00000574049.1
CDS CAA 72 bp AAATCTGTGAATCTGGCATACACAGTTGCTGGACAATaGTTCTTCCTCCACGAGAGGGTTCAACTGTGTCGC +
Preference number: 6 (lower is better)
Translates to: KSVNLAYTVAGQ*FFLHERVQLCR
Trigger: GCGACACAGTTGAACCCTCTCGTGGAGGAAGAACAATTGTCCAGCAACTGTGTATGCCAGATTCACAGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254719.10
ENST00000570451.5
ENST00000571058.5
ENST00000571725.1
CDS CAA 72 bp AATCACTTTCTTATTGCAGTCCTGAGTCGGGCAGGCTaGGTACATGCAGTTCTCTTTGCGAAGATACACCAC +
Preference number: 6 (lower is better)
Translates to: NHFLIAVLSRAG*VHAVLFAKIHH
Trigger: GTGGTGTATCTTCGCAAAGAGAACTGCATGTACCAAGCCTGCCCGACTCAGGACTGCAATAAGAAAGTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS CAA 72 bp GGTGTCGCACTTCTCACAGCGGTACAATCCATTCTGTaGATCAATCACTTTCTTATTGCAGTCCTGAGTCGG +
Preference number: 6 (lower is better)
Translates to: GVALLTAVQSIL*INHFLIAVLSR
Trigger: CCGACTCAGGACTGCAATAAGAAAGTGATTGATCAACAGAATGGATTGTACCGCTGTGAGAAGTGCGACACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS CAA 72 bp CAGATCCCGATGATGTCTACAAGTGAGTCTTTCGACTaGTTCTCGAGGTCATCAATCCCCGTGAAATCAAAC +
Preference number: 6 (lower is better)
Translates to: QIPMMSTSESFD*FSRSSIPVKSN
Trigger: GTTTGATTTCACGGGGATTGATGACCTCGAGAACAAGTCGAAAGACTCACTTGTAGACATCATCGGGATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000574049.1
CDS CAA 72 bp ATATTTACCTTGTCGCCTTGGCCCAGGTTCTCGGATTaGACCTCATACAAGGTTTTCCAGTTGGTGTTACTC +
Preference number: 6 (lower is better)
Translates to: IFTLSPWPRFSD*TSYKVFQLVLL
Trigger: GAGTAACACCAACTGGAAAACCTTGTATGAGGTCAAATCCGAGAACCTGGGCCAAGGCGACAAGGTAAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574049.1
CDS CAA 72 bp AGCAGACTCCTGGAAACAAGTCACCCACTGATTCTCTaGAAAATCTGCAATATTTACCTTGTCGCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: SRLLETSHPLIL*KICNIYLVALA
Trigger: GGCCAAGGCGACAAGGTAAATATTGCAGATTTTCAAGAGAATCAGTGGGTGACTTGTTTCCAGGAGTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574049.1
CDS CAA 90 bp GTTCACAATAAATCTGTGAATCTGGCATACACAGTTGCTGGACAATaGTTCTTCCTCCACGAGAGGGTTCAACTGTGTCGCCAACATGAA +
Preference number: 6 (lower is better)
Translates to: VHNKSVNLAYTVAGQ*FFLHERVQLCRQHE
Trigger: TTCATGTTGGCGACACAGTTGAACCCTCTCGTGGAGGAAGAACAATTGTCCAGCAACTGTGTATGCCAGATTCACAGATTTATTGTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254719.10
ENST00000570451.5
ENST00000571058.5
ENST00000571725.1
CDS TCA 72 bp AATCTGCAATATTTACTGACAGGATCATGCGGTACTTaGAATTGGGAAATTCGGTGTCGCACTTCTCACAGC +
Preference number: 6 (lower is better)
Translates to: NLQYLLTGSCGT*NWEIRCRTSHS
Trigger: GCTGTGAGAAGTGCGACACCGAATTTCCCAATTTCAAGTACCGCATGATCCTGTCAGTAAATATTGCAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254719.10
CDS CAA 72 bp ACTTCAATAAGAGGAAAGAACTTGTCCACTTGCTCATaGAAAGCTGTAGCTCGGATTTCACCACTTTCGTCA +
Preference number: 6 (lower is better)
Translates to: TSIRGKNLSTCS*KAVARISPLSS
Trigger: TGACGAAAGTGGTGAAATCCGAGCTACAGCTTTCAATGAGCAAGTGGACAAGTTCTTTCCTCTTATTGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254719.10
ENST00000573924.1
CDS CAA 72 bp AAATCTGCAATATTTACTGACAGGATCATGCGGTACTaGAAATTGGGAAATTCGGTGTCGCACTTCTCACAG +
Preference number: 6 (lower is better)
Translates to: KSAIFTDRIMRY*KLGNSVSHFSQ
Trigger: CTGTGAGAAGTGCGACACCGAATTTCCCAATTTCAAGTACCGCATGATCCTGTCAGTAAATATTGCAGATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254719.10