Pregenerated sensors for RP2 (Homo sapiens)
Ensembl gene IDs: ENSG00000102218Ensembl transcript IDs: ENST00000218340.4
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTACTGAATCCGTGCATCTaGGGATTGGGTCCAAGAATG | + |
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Preference number: 2 (lower is better) Translates to: SVPSHKFNLLTPPEPITLLNPCI*GLGPRM Trigger: CATTCTTGGACCCAATCCTCAGATGCACGGATTCAG...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| 3UTR-3UTR TCA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTAAAACAGAGTTTCCCCTaGAGACTGAATCCGTGCATC | + |
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Preference number: 2 (lower is better) Translates to: SVPSHKFNLLTPPEPITLKQSFP*RLNPCI Trigger: GATGCACGGATTCAGTCTTCAGGGGAAACTCTGTTT...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| 3UTR CAA 90 bp | GTGATGTGGATGGCAGATTCAGTGCCTTCTCACAAGTTCAACCTATaGACACCTCCTGAACCAATTACTTTAGATTACAACATACCCCTT | + |
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Preference number: 2 (lower is better) Translates to: VMWMADSVPSHKFNL*TPPEPITLDYNIPL Trigger: AAGGGGTATGTTGTAATCTAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGAATCTGCCATCCACATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| 3UTR-3UTR CCA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTAAAAACTGCTGGTGATTaGGCTTCTACAGTTTTAGCA | + |
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Preference number: 2 (lower is better) Translates to: SVPSHKFNLLTPPEPITLKTAGD*ASTVLA Trigger: TGCTAAAACTGTAGAAGCCCAATCACCAGCAGTTTT...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| 3UTR-3UTR GCA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTAGTTAGTAGAGTTACTTaGCAAGCTGGTTATCAAATG | + |
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Preference number: 2 (lower is better) Translates to: SVPSHKFNLLTPPEPITLVSRVT*QAGYQM Trigger: CATTTGATAACCAGCTTGGCAAGTAACTCTACTAAC...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| 3UTR-3UTR GCA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTACAAGTAGCTCTCCTCTaGTTCCTGGTAAATTATTAT | + |
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Preference number: 2 (lower is better) Translates to: SVPSHKFNLLTPPEPITLQVALL*FLVNYY Trigger: ATAATAATTTACCAGGAAGCAGAGGAGAGCTACTTG...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| 3UTR-3UTR CCA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTTCTATATTCACAAGTTaGGAAAGGCTTAATACCAAG | + |
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Preference number: 2 (lower is better) Translates to: VTRFCSNSLDSPQELIKVSIFTS*ERLNTK Trigger: CTTGGTATTAAGCCTTTCCCAACTTGTGAATATAGA...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CCA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTAGAAGAAGCAGCCCATaGTCCCAGCCCGCGGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: VTRFCSNSLDSPQELIKVRRSSP*SQPAEL Trigger: GAGCTCCGCGGGCTGGGACCATGGGCTGCTTCTTCT...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR TCA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTGGTGGACGGATCACCTaGGGTCAGGAGTTCGAGACC | + |
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Preference number: 4 (lower is better) Translates to: VTRFCSNSLDSPQELIKVGGRIT*GQEFET Trigger: GGTCTCGAACTCCTGACCTCAGGTGATCCGTCCACC...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CCA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTAGTAATCCCAGCTCTTTaGGAGGCTGAGGTGGACGGA | + |
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Preference number: 4 (lower is better) Translates to: SVPSHKFNLLTPPEPITLVIPAL*EAEVDG Trigger: TCCGTCCACCTCAGCCTCCCAAAGAGCTGGGATTAC...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR GCA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTATCCGGAAAAACACGCTaGCTTTCACGGGTCCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: SVPSHKFNLLTPPEPITLSGKTR*LSRVPE Trigger: TTCTGGGACCCGTGAAAGGCAGCGTGTTTTTCCGGA...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CCA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTCCAGCTGTACTGCTTTaGCCGCTCCTCCTCGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: VTRFCSNSLDSPQELIKVPAVLL*PLLLVL Trigger: GAGAACGAGGAGGAGCGGCCAAAGCAGTACAGCTGG...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR TCA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTTCAACCTTCTCGCGCTaGTCCCAGCTGTACTGCTTT | + |
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Preference number: 4 (lower is better) Translates to: VTRFCSNSLDSPQELIKVSTFSR*SQLYCF Trigger: AAAGCAGTACAGCTGGGATCAGCGCGAGAAGGTTGA...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR TCA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTGAAGAAGGCTCCAGTTaGGTTCTCCTGACACAGGTG | + |
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Preference number: 4 (lower is better) Translates to: VTRFCSNSLDSPQELIKVEEGSS*VLLTQV Trigger: CACCTGTGTCAGGAGAACTCAACTGGAGCCTTCTTC...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR TCA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTCTGCTCTTCTGTCTCTaGCCCCGGGATATTGGAACA | + |
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Preference number: 4 (lower is better) Translates to: VTRFCSNSLDSPQELIKVLLFCL*PRDIGT Trigger: TGTTCCAATATCCCGGGGTCAGAGACAGAAGAGCAG...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR GCA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTAGTCTACATCTCCAGATaGCGTCTCCTTGCTTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: SVPSHKFNLLTPPEPITLVYISR*RLLAFR Trigger: TCTGAAAGCAAGGAGACGGCATCTGGAGATGTAGAC...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR TCA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTCTGAATCCGTGCATCTaGGGATTGGGTCCAAGAATG | + |
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Preference number: 4 (lower is better) Translates to: VTRFCSNSLDSPQELIKVLNPCI*GLGPRM Trigger: CATTCTTGGACCCAATCCTCAGATGCACGGATTCAG...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR GCA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTATGCACTTGCAATCTCTaGAATTCCGGAAAAACACGC | + |
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Preference number: 4 (lower is better) Translates to: SVPSHKFNLLTPPEPITLCTCNL*NSGKTR Trigger: GCGTGTTTTTCCGGAATTGCAGAGATTGCAAGTGCA...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR GCA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTAAGGCTAATGTGCACTTaGAATCTCTGCAATTCCGGA | + |
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Preference number: 4 (lower is better) Translates to: SVPSHKFNLLTPPEPITLRLMCT*NLCNSG Trigger: TCCGGAATTGCAGAGATTGCAAGTGCACATTAGCCT...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR GCA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTAGCATGATTCATCGCTaGTCTTCTGTCTCTGACCCC | + |
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Preference number: 4 (lower is better) Translates to: VTRFCSNSLDSPQELIKVSMIHR*SSVSDP Trigger: GGGGTCAGAGACAGAAGAGCAGCGATGAATCATGCT...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR GCA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTAAGGAAGGAAGTCAGGTaGTTTTTCCCGAAAAACCCT | + |
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Preference number: 4 (lower is better) Translates to: SVPSHKFNLLTPPEPITLRKEVR*FFPKNP Trigger: AGGGTTTTTCGGGAAAAAGCACCTGACTTCCTTCCT...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CCA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTAGAACATGTAGTCTTTTaGATCAACCTTCTCGCGCTG | + |
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Preference number: 4 (lower is better) Translates to: SVPSHKFNLLTPPEPITLEHVVF*INLLAL Trigger: CAGCGCGAGAAGGTTGATCCAAAAGACTACATGTTC...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CCA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTACTGCTATATGTGATGTaGATGGCAGATTCAGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: SVPSHKFNLLTPPEPITLLLYVM*MADSVP Trigger: AGGCACTGAATCTGCCATCCACATCACATATAGCAG...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CCA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTATTAATAATATCATCATaGCCAGGCGCGGTAGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: SVPSHKFNLLTPPEPITLLIISS*PGAVAH Trigger: GTGAGCTACCGCGCCTGGCCATGATGATATTATTAA...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR TCA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTACATCCTTCAGTCCACTaGACATGTAGTCTTTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: SVPSHKFNLLTPPEPITLHPSVH*TCSLLD Trigger: ATCCAAAAGACTACATGTTCAGTGGACTGAAGGATG...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR TCA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTACAGTTCTCACAGTCTTaGATGAGAAACTGTTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: SVPSHKFNLLTPPEPITLQFSQS*MRNCCP Trigger: AGGACAACAGTTTCTCATTCAAGACTGTGAGAACTG...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR TCA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTTTGAGGAAGACTCAATaGTGGGTTGAGTGGCACAAC | + |
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Preference number: 4 (lower is better) Translates to: VTRFCSNSLDSPQELIKVLRKTQ*WVEWHN Trigger: GTTGTGCCACTCAACCCATCATTGAGTCTTCCTCAA...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR TCA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTATTAGCCCTGCATCTTTaGACTGGAAAGCTAATTCAG | + |
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Preference number: 4 (lower is better) Translates to: SVPSHKFNLLTPPEPITLLALHL*TGKLIQ Trigger: CTGAATTAGCTTTCCAGTTCAAAGATGCAGGGCTAA...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR TCA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTCCAGTTGAGTTCTCCTaGCACAGGTGTAAAGTCATG | + |
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Preference number: 4 (lower is better) Translates to: VTRFCSNSLDSPQELIKVPVEFS*HRCKVM Trigger: CATGACTTTACACCTGTGTCAGGAGAACTCAACTGG...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR TCA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTTCCCGAAAAACCCTTTaGGCATCCTCAGCTTTCATG | + |
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Preference number: 4 (lower is better) Translates to: VTRFCSNSLDSPQELIKVSRKTL*ASSAFM Trigger: CATGAAAGCTGAGGATGCTCAAAGGGTTTTTCGGGA...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR GCA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTAGGGATATTGGAACAATaGTTCTATTGGCTTCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: SVPSHKFNLLTPPEPITLGILEQ*FYWLLW Trigger: CCACAGAAGCCAATAGAAGCATTGTTCCAATATCCC...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CCA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTCGCACACGAAATTGTTaGCAGGCTAATGTGCACTTG | + |
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Preference number: 4 (lower is better) Translates to: VTRFCSNSLDSPQELIKVRTRNC*QANVHL Trigger: CAAGTGCACATTAGCCTGCCAACAATTTCGTGTGCG...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CCA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTAACCACAGCATCTTCTaGAAGAAGGCTCCAGTTGAG | + |
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Preference number: 4 (lower is better) Translates to: VTRFCSNSLDSPQELIKVNHSIF*KKAPVE Trigger: CTCAACTGGAGCCTTCTTCCAGAAGATGCTGTGGTT...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CCA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTCTGACCCCGGGATATTaGAACAATGCTTCTATTGGC | + |
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Preference number: 4 (lower is better) Translates to: VTRFCSNSLDSPQELIKVLTPGY*NNASIG Trigger: GCCAATAGAAGCATTGTTCCAATATCCCGGGGTCAG...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CCA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTACATCCTCAGCTTTCATaGACACTTCCTTTGTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: SVPSHKFNLLTPPEPITLHPQLS*TLPLSE Trigger: TTCAGACAAAGGAAGTGTCCATGAAAGCTGAGGATG...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR TCA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTGACTCAATGATGGGTTaGGTGGCACAACACAAAAAG | + |
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Preference number: 4 (lower is better) Translates to: VTRFCSNSLDSPQELIKVDSMMG*VAQHKK Trigger: CTTTTTGTGTTGTGCCACTCAACCCATCATTGAGTC...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR TCA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTATACTCCATGTATTGTTaGAGATACTTAGCCCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: SVPSHKFNLLTPPEPITLYSMYC*RYLALH Trigger: ATGCAGGGCTAAGTATCTTCAACAATACATGGAGTA...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR TCA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTAACAAGTTCAACCTATTaGCACCTCCTGAACCAATTA | + |
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Preference number: 4 (lower is better) Translates to: SVPSHKFNLLTPPEPITLTSSTY*HLLNQL Trigger: TAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGT...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR GCA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTGTTGGCAGGCTAATGTaGACTTGCAATCTCTGCAAT | + |
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Preference number: 4 (lower is better) Translates to: VTRFCSNSLDSPQELIKVVGRLM*TCNLCN Trigger: ATTGCAGAGATTGCAAGTGCACATTAGCCTGCCAAC...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR TCA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTATCGTTTACAATAAGTTaGCATACTTCTACAGCACCA | + |
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Preference number: 4 (lower is better) Translates to: SVPSHKFNLLTPPEPITLSFTIS*HTSTAP Trigger: TGGTGCTGTAGAAGTATGTCAACTTATTGTAAACGA...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR TCA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTACCTATTGACACCTCCTaGACCAATTACTTTAGATTA | + |
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Preference number: 4 (lower is better) Translates to: SVPSHKFNLLTPPEPITLPIDTS*TNYFRL Trigger: TAATCTAAAGTAATTGGTTCAGGAGGTGTCAATAGG...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR TCA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTAATAGCTGCTATATGTaGTGTGGATGGCAGATTCAG | + |
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Preference number: 4 (lower is better) Translates to: VTRFCSNSLDSPQELIKVNSCYM*CGWQIQ Trigger: CTGAATCTGCCATCCACATCACATATAGCAGCTATT...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR GCA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTCAGATGCCGTCTCCTTaGTTTCAGATACAAACATCT | + |
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Preference number: 4 (lower is better) Translates to: VTRFCSNSLDSPQELIKVQMPSP*FQIQTS Trigger: AGATGTTTGTATCTGAAAGCAAGGAGACGGCATCTG...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR TCA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTAAAACTAATGCCGTCTaGCCACTATTTGCAAAGATC | + |
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Preference number: 4 (lower is better) Translates to: VTRFCSNSLDSPQELIKVKTNAV*PLFAKI Trigger: GATCTTTGCAAATAGTGGTCAGACGGCATTAGTTTT...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CCA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTGAACAATGCTTCTATTaGCTTCTGTGGAAACACGAA | + |
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Preference number: 4 (lower is better) Translates to: VTRFCSNSLDSPQELIKVEQCFY*LLWKHE Trigger: TTCGTGTTTCCACAGAAGCCAATAGAAGCATTGTTC...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CCA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTCTTAATACCAAGTCCTaGTTCCACATTGCACTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VTRFCSNSLDSPQELIKVLNTKS*FHIALH Trigger: ATGAAGTGCAATGTGGAACCAGGACTTGGTATTAAG...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CCA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTATCTATATTCACAAGTTaGGAAAGGCTTAATACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SVPSHKFNLLTPPEPITLSIFTS*ERLNTK Trigger: CTTGGTATTAAGCCTTTCCCAACTTGTGAATATAGA...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CCA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTATTGGGTCCAAGAATGTaGATTTTTAAACAAGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVPSHKFNLLTPPEPITLLGPRM*IFKQVA Trigger: AGCTACTTGTTTAAAAATCCACATTCTTGGACCCAA...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR TCA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTTCCAAATTTGATATTTaGGGAAGACTCAATGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: VTRFCSNSLDSPQELIKVSKFDI*GRLNDG Trigger: CCCATCATTGAGTCTTCCTCAAATATCAAATTTGGA...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR TCA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTACAGGTGTAAAGTCATaGATGTTACTCCATGTATTG | + |
|
Preference number: 4 (lower is better) Translates to: VTRFCSNSLDSPQELIKVTGVKS*MLLHVL Trigger: CAATACATGGAGTAACATTCATGACTTTACACCTGT...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR GCA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTGTTAGTAGAGTTACTTaGCAAGCTGGTTATCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: VTRFCSNSLDSPQELIKVVSRVT*QAGYQM Trigger: CATTTGATAACCAGCTTGGCAAGTAACTCTACTAAC...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR GCA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTCAAGTAGCTCTCCTCTaGTTCCTGGTAAATTATTAT | + |
|
Preference number: 4 (lower is better) Translates to: VTRFCSNSLDSPQELIKVQVALL*FLVNYY Trigger: ATAATAATTTACCAGGAAGCAGAGGAGAGCTACTTG...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS CCA 90 bp | CCTCCTCGTTCTCGGGCCGCGACTCCTTGTCAGCCTTCCGTCTCTTaGAGAAGAAGCAGCCCATGGTCCCAGCCCGCGGAGCTCGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PPRSRAATPCQPSVS*RRSSPWSQPAELVG Trigger: GCCAACGAGCTCCGCGGGCTGGGACCATGGGCTGCTTCTTCTCCAAGAGACGGAAGGCTGACAAGGAGTCGCGGCCCGAGAACGAGGAGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS CCA 90 bp | GCGACTCCTTGTCAGCCTTCCGTCTCTTGGAGAAGAAGCAGCCCATaGTCCCAGCCCGCGGAGCTCGTTGGCCAGCTCACTAGCTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ATPCQPSVSWRRSSP*SQPAELVGQLTSSG Trigger: GCCTGAGCTAGTGAGCTGGCCAACGAGCTCCGCGGGCTGGGACCATGGGCTGCTTCTTCTCCAAGAGACGGAAGGCTGACAAGGAGTCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS CCA 90 bp | GTCTTTTGGATCAACCTTCTCGCGCTGATCCCAGCTGTACTGCTTTaGCCGCTCCTCCTCGTTCTCGGGCCGCGACTCCTTGTCAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: VFWINLLALIPAVLL*PLLLVLGPRLLVSL Trigger: AAGGCTGACAAGGAGTCGCGGCCCGAGAACGAGGAGGAGCGGCCAAAGCAGTACAGCTGGGATCAGCGCGAGAAGGTTGATCCAAAAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218340.4 |
||
| CDS TCA 90 bp | CTACCGTCCCAGGTAAGCGACCTACTGTTTCATCCTTCAGTCCACTaGACATGTAGTCTTTTGGATCAACCTTCTCGCGCTGATCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LPSQVSDLLFHPSVH*TCSLLDQPSRADPS Trigger: GCTGGGATCAGCGCGAGAAGGTTGATCCAAAAGACTACATGTTCAGTGGACTGAAGGATGAAACAGTAGGTCGCTTACCTGGGACGGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CAA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTAAGCCCGCGGAGCTCGTaGGCCAGCTCACTAGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SVPSHKFNLLTPPEPITLSPRSS*ASSLAQ Trigger: CTGAGCTAGTGAGCTGGCCAACGAGCTCCGCGGGCT...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS GCA 90 bp | CTCGCACACGAAATTGTTGGCAGGCTAATGTGCACTTGCAATCTCTaGAATTCCGGAAAAACACGCTGCCTTTCACGGGTCCCAGAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LAHEIVGRLMCTCNL*NSGKTRCLSRVPEK Trigger: TTTTTCTGGGACCCGTGAAAGGCAGCGTGTTTTTCCGGAATTGCAGAGATTGCAAGTGCACATTAGCCTGCCAACAATTTCGTGTGCGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CAA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTACCCAGCTGTACTGCTTaGGCCGCTCCTCCTCGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SVPSHKFNLLTPPEPITLPSCTA*AAPPRS Trigger: AGAACGAGGAGGAGCGGCCAAAGCAGTACAGCTGGG...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS GCA 90 bp | TTCTACAATCTCGCACACGAAATTGTTGGCAGGCTAATGTGCACTTaGAATCTCTGCAATTCCGGAAAAACACGCTGCCTTTCACGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FYNLAHEIVGRLMCT*NLCNSGKTRCLSRV Trigger: GACCCGTGAAAGGCAGCGTGTTTTTCCGGAATTGCAGAGATTGCAAGTGCACATTAGCCTGCCAACAATTTCGTGTGCGAGATTGTAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CAA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTTCGGGCCGCGACTCCTaGTCAGCCTTCCGTCTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VTRFCSNSLDSPQELIKVSGRDS*SAFRLL Trigger: CAAGAGACGGAAGGCTGACAAGGAGTCGCGGCCCGA...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS GCA 90 bp | CCAGCTTTCTACAATCTCGCACACGAAATTGTTGGCAGGCTAATGTaGACTTGCAATCTCTGCAATTCCGGAAAAACACGCTGCCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PAFYNLAHEIVGRLM*TCNLCNSGKTRCLS Trigger: TGAAAGGCAGCGTGTTTTTCCGGAATTGCAGAGATTGCAAGTGCACATTAGCCTGCCAACAATTTCGTGTGCGAGATTGTAGAAAGCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS GCA 90 bp | CAAGGCAATAACAGGACCTTTGTTCAGAAGAGGAAGGAAGTCAGGTaGTTTTTCCCGAAAAACCCTTTGAGCATCCTCAGCTTTCATGGA | + |
|
Preference number: 5 (lower is better) Translates to: QGNNRTFVQKRKEVR*FFPKNPLSILSFHG Trigger: TCCATGAAAGCTGAGGATGCTCAAAGGGTTTTTCGGGAAAAAGCACCTGACTTCCTTCCTCTTCTGAACAAAGGTCCTGTTATTGCCTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CAA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTAGGAAGAAGGCTCCAGTaGAGTTCTCCTGACACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SVPSHKFNLLTPPEPITLGRRLQ*SSPDTG Trigger: ACCTGTGTCAGGAGAACTCAACTGGAGCCTTCTTCC...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS TCA 90 bp | GCAAATAATACCACTAAGCATGATTCATCGCTGCTCTTCTGTCTCTaGCCCCGGGATATTGGAACAATGCTTCTATTGGCTTCTGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: ANNTTKHDSSLLFCL*PRDIGTMLLLASVE Trigger: TTCCACAGAAGCCAATAGAAGCATTGTTCCAATATCCCGGGGTCAGAGACAGAAGAGCAGCGATGAATCATGCTTAGTGGTATTATTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CAA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTTCAGCCTTCCGTCTCTaGGAGAAGAAGCAGCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: VTRFCSNSLDSPQELIKVSAFRL*EKKQPM Trigger: CATGGGCTGCTTCTTCTCCAAGAGACGGAAGGCTGA...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CAA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTATTGAATGAGAAACTGTaGTCCTGCTACCGTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SVPSHKFNLLTPPEPITLLNEKL*SCYRPR Trigger: CCTGGGACGGTAGCAGGACAACAGTTTCTCATTCAA...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CAA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTACAGGCTAATGTGCACTaGCAATCTCTGCAATTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SVPSHKFNLLTPPEPITLQANVH*QSLQFR Trigger: CCGGAATTGCAGAGATTGCAAGTGCACATTAGCCTG...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS TCA 90 bp | CAGAGTGATCAAAAATATAGATGTTACAGTTCTCACAGTCTTGAATaGGAAACTGTTGTCCTGCTACCGTCCCAGGTAAGCGACCTACTG | + |
|
Preference number: 5 (lower is better) Translates to: QSDQKYRCYSSHSLE*ETVVLLPSQVSDLL Trigger: CAGTAGGTCGCTTACCTGGGACGGTAGCAGGACAACAGTTTCTCATTCAAGACTGTGAGAACTGTAACATCTATATTTTTGATCACTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS TCA 90 bp | GGAAGAAGGCTCCAGTTGAGTTCTCCTGACACAGGTGTAAAGTCATaGATGTTACTCCATGTATTGTTGAAGATACTTAGCCCTGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: GRRLQLSSPDTGVKS*MLLHVLLKILSPAS Trigger: AGATGCAGGGCTAAGTATCTTCAACAATACATGGAGTAACATTCATGACTTTACACCTGTGTCAGGAGAACTCAACTGGAGCCTTCTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS CCA 90 bp | CACAAAAAGACTTCCAGCTTTCTACAATCTCGCACACGAAATTGTTaGCAGGCTAATGTGCACTTGCAATCTCTGCAATTCCGGAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: HKKTSSFLQSRTRNC*QANVHLQSLQFRKN Trigger: GTTTTTCCGGAATTGCAGAGATTGCAAGTGCACATTAGCCTGCCAACAATTTCGTGTGCGAGATTGTAGAAAGCTGGAAGTCTTTTTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CAA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTATCTGACCCCGGGATATaGGAACAATGCTTCTATTGG | + |
|
Preference number: 5 (lower is better) Translates to: SVPSHKFNLLTPPEPITLSDPGI*EQCFYW Trigger: CCAATAGAAGCATTGTTCCAATATCCCGGGGTCAGA...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CAA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTAGGAACAATGCTTCTATaGGCTTCTGTGGAAACACGA | + |
|
Preference number: 5 (lower is better) Translates to: SVPSHKFNLLTPPEPITLGTMLL*ASVETR Trigger: TCGTGTTTCCACAGAAGCCAATAGAAGCATTGTTCC...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CAA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTAACAGTTCTCACAGTCTaGAATGAGAAACTGTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SVPSHKFNLLTPPEPITLTVLTV*NEKLLS Trigger: GGACAACAGTTTCTCATTCAAGACTGTGAGAACTGT...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CAA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTAAGACTCAATGATGGGTaGAGTGGCACAACACAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: SVPSHKFNLLTPPEPITLRLNDG*SGTTQK Trigger: TTTTTGTGTTGTGCCACTCAACCCATCATTGAGTCT...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CAA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTACTTAGCCCTGCATCTTaGAACTGGAAAGCTAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: SVPSHKFNLLTPPEPITLLSPAS*NWKANS Trigger: TGAATTAGCTTTCCAGTTCAAAGATGCAGGGCTAAG...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CAA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTGAAACACGAACAGCTTaGAGCTCTTCGGTAGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VTRFCSNSLDSPQELIKVETRTA*SSSVVG Trigger: ACCTACTACCGAAGAGCTCAAAGCTGTTCGTGTTTC...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CAA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTCCAGATGCCGTCTCCTaGCTTTCAGATACAAACATC | + |
|
Preference number: 5 (lower is better) Translates to: VTRFCSNSLDSPQELIKVPDAVS*LSDTNI Trigger: GATGTTTGTATCTGAAAGCAAGGAGACGGCATCTGG...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CAA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTACACAAGTTCAACCTATaGACACCTCCTGAACCAATT | + |
|
Preference number: 5 (lower is better) Translates to: SVPSHKFNLLTPPEPITLHKFNL*TPPEPI Trigger: AATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTG...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CAA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTATTACTCCATGTATTGTaGAAGATACTTAGCCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SVPSHKFNLLTPPEPITLLLHVL*KILSPA Trigger: TGCAGGGCTAAGTATCTTCAACAATACATGGAGTAA...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CAA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTGCAATAACAGGACCTTaGTTCAGAAGAGGAAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VTRFCSNSLDSPQELIKVAITGP*FRRGRK Trigger: CTTCCTTCCTCTTCTGAACAAAGGTCCTGTTATTGC...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CAA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTACTCGTTTACAATAAGTaGACATACTTCTACAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: SVPSHKFNLLTPPEPITLLVYNK*TYFYST Trigger: GGTGCTGTAGAAGTATGTCAACTTATTGTAAACGAG...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CAA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTATCAGATACAAACATCTaGGTCCCATTGAATATCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SVPSHKFNLLTPPEPITLSDTNI*VPLNIS Trigger: CGAGATATTCAATGGGACCAAGATGTTTGTATCTGA...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CAA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTAGTCCTGGTTCCACATaGCACTTCATATTCCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: VTRFCSNSLDSPQELIKVSPGST*HFIFPS Trigger: AGATGGGAATATGAAGTGCAATGTGGAACCAGGACT...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CAA 90 bp | TCAGTGCCTTCTCACAAGTTCAACCTATTGACACCTCCTGAACCAATTACTTTAATGTTACTCCATGTATaGTTGAAGATACTTAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SVPSHKFNLLTPPEPITLMLLHV*LKILSP Trigger: AGGGCTAAGTATCTTCAACAATACATGGAGTAACAT...TAAAGTAATTGGTTCAGGAGGTGTCAATAGGTTGAACTTGTGAGAAGGCACTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS-3UTR CAA 90 bp | GTCACAAGGTTTTGTTCCAATTCTCTTGATAGCCCACAAGAGCTAATAAAAGTTCCGTCTGACCACTATTaGCAAAGATCATTTGTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: VTRFCSNSLDSPQELIKVPSDHY*QRSFVN Trigger: ATTTACAAATGATCTTTGCAAATAGTGGTCAGACGG...AACTTTTATTAGCTCTTGTGGGCTATCAAGAGAATTGGAACAAAACCTTGTGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000218340.4 |
||
| CDS CAA 90 bp | TCCTCCTCGTTCTCGGGCCGCGACTCCTTGTCAGCCTTCCGTCTCTaGGAGAAGAAGCAGCCCATGGTCCCAGCCCGCGGAGCTCGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SSSFSGRDSLSAFRL*EKKQPMVPARGARW Trigger: CCAACGAGCTCCGCGGGCTGGGACCATGGGCTGCTTCTTCTCCAAGAGACGGAAGGCTGACAAGGAGTCGCGGCCCGAGAACGAGGAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
||
| CDS CAA 72 bp | TTCTCGGGCCGCGACTCCTTGTCAGCCTTCCGTCTCTaGGAGAAGAAGCAGCCCATGGTCCCAGCCCGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: FSGRDSLSAFRL*EKKQPMVPARG Trigger: TCCGCGGGCTGGGACCATGGGCTGCTTCTTCTCCAAGAGACGGAAGGCTGACAAGGAGTCGCGGCCCGAGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
||
| CDS CCA 72 bp | TGTCAGCCTTCCGTCTCTTGGAGAAGAAGCAGCCCATaGTCCCAGCCCGCGGAGCTCGTTGGCCAGCTCACT | + |
|
Preference number: 6 (lower is better) Translates to: CQPSVSWRRSSP*SQPAELVGQLT Trigger: AGTGAGCTGGCCAACGAGCTCCGCGGGCTGGGACCATGGGCTGCTTCTTCTCCAAGAGACGGAAGGCTGACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
||
| CDS CAA 72 bp | GAAGAAGCAGCCCATGGTCCCAGCCCGCGGAGCTCGTaGGCCAGCTCACTAGCTCAGGCACTTCCTAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: EEAAHGPSPRSS*ASSLAQALPRV Trigger: CACTCTAGGAAGTGCCTGAGCTAGTGAGCTGGCCAACGAGCTCCGCGGGCTGGGACCATGGGCTGCTTCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
||
| CDS GCA 72 bp | CTCGCACACGAAATTGTTGGCAGGCTAATGTGCACTTaGAATCTCTGCAATTCCGGAAAAACACGCTGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LAHEIVGRLMCT*NLCNSGKTRCL Trigger: AAGGCAGCGTGTTTTTCCGGAATTGCAGAGATTGCAAGTGCACATTAGCCTGCCAACAATTTCGTGTGCGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000218340.4 |
||
| CDS CCA 72 bp | TTCATCGCTGCTCTTCTGTCTCTGACCCCGGGATATTaGAACAATGCTTCTATTGGCTTCTGTGGAAACACG | + |
|
Preference number: 6 (lower is better) Translates to: FIAALLSLTPGY*NNASIGFCGNT Trigger: CGTGTTTCCACAGAAGCCAATAGAAGCATTGTTCCAATATCCCGGGGTCAGAGACAGAAGAGCAGCGATGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS CAA 72 bp | TCTCGCACACGAAATTGTTGGCAGGCTAATGTGCACTaGCAATCTCTGCAATTCCGGAAAAACACGCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: SRTRNCWQANVH*QSLQFRKNTLP Trigger: AGGCAGCGTGTTTTTCCGGAATTGCAGAGATTGCAAGTGCACATTAGCCTGCCAACAATTTCGTGTGCGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS CAA 90 bp | TTTCTACAATCTCGCACACGAAATTGTTGGCAGGCTAATGTGCACTaGCAATCTCTGCAATTCCGGAAAAACACGCTGCCTTTCACGGGT | + |
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Preference number: 6 (lower is better) Translates to: FLQSRTRNCWQANVH*QSLQFRKNTLPFTG Trigger: ACCCGTGAAAGGCAGCGTGTTTTTCCGGAATTGCAGAGATTGCAAGTGCACATTAGCCTGCCAACAATTTCGTGTGCGAGATTGTAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS CAA 90 bp | CTAAGCATGATTCATCGCTGCTCTTCTGTCTCTGACCCCGGGATATaGGAACAATGCTTCTATTGGCTTCTGTGGAAACACGAACAGCTT | + |
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Preference number: 6 (lower is better) Translates to: LSMIHRCSSVSDPGI*EQCFYWLLWKHEQL Trigger: AAGCTGTTCGTGTTTCCACAGAAGCCAATAGAAGCATTGTTCCAATATCCCGGGGTCAGAGACAGAAGAGCAGCGATGAATCATGCTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS TCA 72 bp | CAGGTAAGCGACCTACTGTTTCATCCTTCAGTCCACTaGACATGTAGTCTTTTGGATCAACCTTCTCGCGCT | + |
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Preference number: 6 (lower is better) Translates to: QVSDLLFHPSVH*TCSLLDQPSRA Trigger: AGCGCGAGAAGGTTGATCCAAAAGACTACATGTTCAGTGGACTGAAGGATGAAACAGTAGGTCGCTTACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS TCA 72 bp | ACCACTAAGCATGATTCATCGCTGCTCTTCTGTCTCTaGCCCCGGGATATTGGAACAATGCTTCTATTGGCT | + |
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Preference number: 6 (lower is better) Translates to: TTKHDSSLLFCL*PRDIGTMLLLA Trigger: AGCCAATAGAAGCATTGTTCCAATATCCCGGGGTCAGAGACAGAAGAGCAGCGATGAATCATGCTTAGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS TCA 72 bp | GGAAGGAAGTCAGGTGCTTTTTCCCGAAAAACCCTTTaGGCATCCTCAGCTTTCATGGACACTTCCTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: GRKSGAFSRKTL*ASSAFMDTSFV Trigger: GACAAAGGAAGTGTCCATGAAAGCTGAGGATGCTCAAAGGGTTTTTCGGGAAAAAGCACCTGACTTCCTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS GCA 72 bp | TGCTCTTCTGTCTCTGACCCCGGGATATTGGAACAATaGTTCTATTGGCTTCTGTGGAAACACGAACAGCTT | + |
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Preference number: 6 (lower is better) Translates to: CSSVSDPGILEQ*FYWLLWKHEQL Trigger: AAGCTGTTCGTGTTTCCACAGAAGCCAATAGAAGCATTGTTCCAATATCCCGGGGTCAGAGACAGAAGAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS GCA 72 bp | AACAGGACCTTTGTTCAGAAGAGGAAGGAAGTCAGGTaGTTTTTCCCGAAAAACCCTTTGAGCATCCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: NRTFVQKRKEVR*FFPKNPLSILS Trigger: GCTGAGGATGCTCAAAGGGTTTTTCGGGAAAAAGCACCTGACTTCCTTCCTCTTCTGAACAAAGGTCCTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS GCA 72 bp | TACAATCTCGCACACGAAATTGTTGGCAGGCTAATGTaGACTTGCAATCTCTGCAATTCCGGAAAAACACGC | + |
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Preference number: 6 (lower is better) Translates to: YNLAHEIVGRLM*TCNLCNSGKTR Trigger: GCGTGTTTTTCCGGAATTGCAGAGATTGCAAGTGCACATTAGCCTGCCAACAATTTCGTGTGCGAGATTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS GCA 72 bp | CACCAGCAAATAATACCACTAAGCATGATTCATCGCTaGTCTTCTGTCTCTGACCCCGGGATATTGGAACAA | + |
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Preference number: 6 (lower is better) Translates to: HQQIIPLSMIHR*SSVSDPGILEQ Trigger: TTGTTCCAATATCCCGGGGTCAGAGACAGAAGAGCAGCGATGAATCATGCTTAGTGGTATTATTTGCTGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS TCA 72 bp | AGCATCTTCTGGAAGAAGGCTCCAGTTGAGTTCTCCTaGCACAGGTGTAAAGTCATGAATGTTACTCCATGT | + |
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Preference number: 6 (lower is better) Translates to: SIFWKKAPVEFS*HRCKVMNVTPC Trigger: ACATGGAGTAACATTCATGACTTTACACCTGTGTCAGGAGAACTCAACTGGAGCCTTCTTCCAGAAGATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS CCA 72 bp | ACTTCCAGCTTTCTACAATCTCGCACACGAAATTGTTaGCAGGCTAATGTGCACTTGCAATCTCTGCAATTC | + |
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Preference number: 6 (lower is better) Translates to: TSSFLQSRTRNC*QANVHLQSLQF Trigger: GAATTGCAGAGATTGCAAGTGCACATTAGCCTGCCAACAATTTCGTGTGCGAGATTGTAGAAAGCTGGAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS TCA 72 bp | CAAAAATATAGATGTTACAGTTCTCACAGTCTTGAATaGGAAACTGTTGTCCTGCTACCGTCCCAGGTAAGC | + |
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Preference number: 6 (lower is better) Translates to: QKYRCYSSHSLE*ETVVLLPSQVS Trigger: GCTTACCTGGGACGGTAGCAGGACAACAGTTTCTCATTCAAGACTGTGAGAACTGTAACATCTATATTTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS CAA 72 bp | GTTGGGAAAGGCTTAATACCAAGTCCTGGTTCCACATaGCACTTCATATTCCCATCTGTATATCAGCAAAGT | + |
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Preference number: 6 (lower is better) Translates to: VGKGLIPSPGST*HFIFPSVYQQS Trigger: ACTTTGCTGATATACAGATGGGAATATGAAGTGCAATGTGGAACCAGGACTTGGTATTAAGCCTTTCCCAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS CAA 90 bp | TATTCACAAGTTGGGAAAGGCTTAATACCAAGTCCTGGTTCCACATaGCACTTCATATTCCCATCTGTATATCAGCAAAGTTGTAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: YSQVGKGLIPSPGST*HFIFPSVYQQSCRS Trigger: GCTTCTACAACTTTGCTGATATACAGATGGGAATATGAAGTGCAATGTGGAACCAGGACTTGGTATTAAGCCTTTCCCAACTTGTGAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS TCA 72 bp | CTCCAGTTGAGTTCTCCTGACACAGGTGTAAAGTCATaGATGTTACTCCATGTATTGTTGAAGATACTTAGC | + |
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Preference number: 6 (lower is better) Translates to: LQLSSPDTGVKS*MLLHVLLKILS Trigger: GCTAAGTATCTTCAACAATACATGGAGTAACATTCATGACTTTACACCTGTGTCAGGAGAACTCAACTGGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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| CDS CAA 72 bp | CATCTTGGTCCCATTGAATATCTCGTTTACAATAAGTaGACATACTTCTACAGCACCATCCCCATTAAACTC | + |
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Preference number: 6 (lower is better) Translates to: HLGPIEYLVYNK*TYFYSTIPIKL Trigger: GAGTTTAATGGGGATGGTGCTGTAGAAGTATGTCAACTTATTGTAAACGAGATATTCAATGGGACCAAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000218340.4 |
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