RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for RP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000104237

Ensembl transcript IDs: ENST00000220676.2, ENST00000518787.2, ENST00000522001.2, ENST00000602362.2, ENST00000636932.1, ENST00000637698.1, ENST00000646684.1, ENST00000650534.1

Found 559 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGAAGGCAGGAGGGCCAAGGTCACAGTGTGGACGCGCACGGGCTCTaGAGTCAGACTTCTAGGGTCACATCCCGGCTCTCCTGCTTGTTC +
Preference number: 1 (lower is better)
Translates to: GRQEGQGHSVDAHGL*SQTSRVTSRLSCLF
Trigger: GAACAAGCAGGAGAGCCGGGATGTGACCCTAGAAGTCTGACTTCAGAGCCCGTGCGCGTCCACACTGTGACCTTGGCCCTCCTGCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR TCA 90 bp GAGGAGGTGAGCAGCAGCAGTATGGGTACCCCAGATACCAGGGGCTaGTCTTGGTCAGCTGTTGGCGGAGGCTGTCAGTGCATCCTCCCA +
Preference number: 1 (lower is better)
Translates to: EEVSSSSMGTPDTRG*SWSAVGGGCQCILP
Trigger: TGGGAGGATGCACTGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGGTACCCATACTGCTGCTGCTCACCTCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR GCA 90 bp CCGATGGATGTGAGATATCTGCCCTGCGCTCTGCTGCTCTCTGCCTaGAGGACTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACC +
Preference number: 1 (lower is better)
Translates to: PMDVRYLPCALLLSA*RTLSPARSSNCKWT
Trigger: GGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAGTCCTGCAGGCAGAGAGCAGCAGAGCGCAGGGCAGATATCTCACATCCATCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR GCA 90 bp GTGACCGATGGATGTGAGATATCTGCCCTGCGCTCTGCTGCTCTCTaGCTGCAGGACTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTG +
Preference number: 1 (lower is better)
Translates to: VTDGCEISALRSAAL*LQDSVTSSKLKLQV
Trigger: CACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAGTCCTGCAGGCAGAGAGCAGCAGAGCGCAGGGCAGATATCTCACATCCATCGGTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR CCA 90 bp ATACTAAAAACAAGCAGGGAAGGCAGGAGGGCCAAGGTCACAGTGTaGACGCGCACGGGCTCTGAAGTCAGACTTCTAGGGTCACATCCC +
Preference number: 1 (lower is better)
Translates to: ILKTSREGRRAKVTV*TRTGSEVRLLGSHP
Trigger: GGGATGTGACCCTAGAAGTCTGACTTCAGAGCCCGTGCGCGTCCACACTGTGACCTTGGCCCTCCTGCCTTCCCTGCTTGTTTTTAGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR CCA 90 bp GGTGGTATGCAAGATTTGCCTCCTTGGCCCCTCTGCCTGATTTCATaGGATACTAAAAACAAGCAGGGAAGGCAGGAGGGCCAAGGTCAC +
Preference number: 1 (lower is better)
Translates to: GGMQDLPPWPLCLIS*DTKNKQGRQEGQGH
Trigger: GTGACCTTGGCCCTCCTGCCTTCCCTGCTTGTTTTTAGTATCCCATGAAATCAGGCAGAGGGGCCAAGGAGGCAAATCTTGCATACCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR TCA 90 bp ATCATGAAGGTGGTATGCAAGATTTGCCTCCTTGGCCCCTCTGCCTaGTTTCATGGGATACTAAAAACAAGCAGGGAAGGCAGGAGGGCC +
Preference number: 1 (lower is better)
Translates to: IMKVVCKICLLGPSA*FHGILKTSREGRRA
Trigger: GGCCCTCCTGCCTTCCCTGCTTGTTTTTAGTATCCCATGAAATCAGGCAGAGGGGCCAAGGAGGCAAATCTTGCATACCACCTTCATGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR TCA 90 bp AGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAATaGGTGGGTCCAACACAAACTGACCCTCCCCAGGTGTTTGCTCCA +
Preference number: 1 (lower is better)
Translates to: RLSVHPPNFGSSQKQ*VGPTQTDPPQVFAP
Trigger: TGGAGCAAACACCTGGGGAGGGTCAGTTTGTGTTGGACCCACTCATTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR CCA 90 bp ACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTaGGAACACACAGTAACCCAATTGGTTGGGTTCTTTCTACATTTT +
Preference number: 1 (lower is better)
Translates to: TSSKLKLQVDPQDVH*EHTVTQLVGFFLHF
Trigger: AAAATGTAGAAAGAACCCAACCAATTGGGTTACTGTGTGTTCCCAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR GCA 90 bp ATGATCTGCCAGGCCAGAGTTAAGTTCTACACACACATACACACATaGACACACACACACACACATATACACACACACCGTAATGGTGAA +
Preference number: 1 (lower is better)
Translates to: MICQARVKFYTHIHT*THTHTHIHTHRNGE
Trigger: TTCACCATTACGGTGTGTGTGTATATGTGTGTGTGTGTGTGTGCATGTGTGTATGTGTGTGTAGAACTTAACTCTGGCCTGGCAGATCAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR CAA 90 bp GGTGAGCAGCAGCAGTATGGGTACCCCAGATACCAGGGGCTGATCTaGGTCAGCTGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTT +
Preference number: 2 (lower is better)
Translates to: GEQQQYGYPRYQGLI*VSCWRRLSVHPPNF
Trigger: AAAATTGGGAGGATGCACTGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGGTACCCATACTGCTGCTGCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR-3UTR GCA 90 bp CTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGCCCTCCCCAGGTGTTTaGTCCAGCCCAAGCAAAAGA +
Preference number: 2 (lower is better)
Translates to: LCHQLEAQTASGPTGRALPSPGV*SSPSKR
Trigger: TCTTTTGCTTGGGCTGGAGCAAACACCTGGGGAGGG...CAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR-3UTR CCA 90 bp CCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAGTGCACCTTTTGAAGCATATTaGAGCGACAGGCCCAAGTGG +
Preference number: 2 (lower is better)
Translates to: PQIPGADLGQLLAEAVSAPFEAY*SDRPKW
Trigger: CCACTTGGGCCTGTCGCTCCAATATGCTTCAAAAGG...TGCACTGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR-3UTR CCA 90 bp CTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGGGATCTTGGTCAGCTGTTaGCGGAGGCTGTCAGTGCAT +
Preference number: 2 (lower is better)
Translates to: LSPARSSNCKWTHRTCTGILVSC*RRLSVH
Trigger: ATGCACTGACAGCCTCCGCCAACAGCTGACCAAGAT...CCCAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR CAA 90 bp TCTAGGGTCACATCCCGGCTCTCCTGCTTGTTCCACTCTCTAAGCTaGGGCAGGTCACTTGGCTTTTCCATGTGTCGGTTTCCTCATCTG +
Preference number: 2 (lower is better)
Translates to: SRVTSRLSCLFHSLS*GRSLGFSMCRFPHL
Trigger: CAGATGAGGAAACCGACACATGGAAAAGCCAAGTGACCTGCCCAAGCTTAGAGAGTGGAACAAGCAGGAGAGCCGGGATGTGACCCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR-3UTR TCA 90 bp ACATCCCGGCTCTCCTGCTTGTTCCACTCTCTAAGCTTGGGCAGGTCACTTGGCCCTGTGGCACCAAGTTaGCAAGTATTTGAGGCTTCA +
Preference number: 2 (lower is better)
Translates to: TSRLSCLFHSLSLGRSLGPVAPS*QVFEAS
Trigger: TGAAGCCTCAAATACTTGTCAACTTGGTGCCACAGG...GCCAAGTGACCTGCCCAAGCTTAGAGAGTGGAACAAGCAGGAGAGCCGGGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR-3UTR TCA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAAGGGTCCAACACAAACTaGCCCTCCCCAGGTGTTTGC +
Preference number: 2 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQGSNTN*PSPGVC
Trigger: GCAAACACCTGGGGAGGGTCAGTTTGTGTTGGACCC...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR-3UTR TCA 90 bp ACATCCCGGCTCTCCTGCTTGTTCCACTCTCTAAGCTTGGGCAGGTCACTTGGCAGTTCTCAGAAACAATaGGTGGGTCCAACACAAACT +
Preference number: 2 (lower is better)
Translates to: TSRLSCLFHSLSLGRSLGSSQKQ*VGPTQT
Trigger: AGTTTGTGTTGGACCCACTCATTGTTTCTGAGAACT...GCCAAGTGACCTGCCCAAGCTTAGAGAGTGGAACAAGCAGGAGAGCCGGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR-3UTR TCA 90 bp CACACACACACACATATACACACACACCGTAATGGTGAAATGTGCCGACTACTACCAGATACCAGGGGCTaGTCTTGGTCAGCTGTTGGC +
Preference number: 2 (lower is better)
Translates to: HTHTHIHTHRNGEMCRLLPDTRG*SWSAVG
Trigger: GCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGG...TAGTAGTCGGCACATTTCACCATTACGGTGTGTGTGTATATGTGTGTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR-3UTR TCA 90 bp ACATCCCGGCTCTCCTGCTTGTTCCACTCTCTAAGCTTGGGCAGGTCACTTGGCAAAGACAGGTGTCTTTaGTATCAAAAGCTACATCCT +
Preference number: 2 (lower is better)
Translates to: TSRLSCLFHSLSLGRSLGKDRCL*YQKLHP
Trigger: AGGATGTAGCTTTTGATATCAAAGACACCTGTCTTT...GCCAAGTGACCTGCCCAAGCTTAGAGAGTGGAACAAGCAGGAGAGCCGGGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR-3UTR CCA 90 bp ACATCCCGGCTCTCCTGCTTGTTCCACTCTCTAAGCTTGGGCAGGTCACTTGGCAGTAACCCAATTGGTTaGGTTCTTTCTACATTTTCT +
Preference number: 2 (lower is better)
Translates to: TSRLSCLFHSLSLGRSLGSNPIG*VLSTFS
Trigger: AGAAAATGTAGAAAGAACCCAACCAATTGGGTTACT...GCCAAGTGACCTGCCCAAGCTTAGAGAGTGGAACAAGCAGGAGAGCCGGGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR CAA 90 bp AGAAACAATGAGTGGGTCCAACACAAACTGACCCTCCCCAGGTGTTaGCTCCAGCCCAAGCAAAAGACAAATGCACTATCACAATCAGAT +
Preference number: 2 (lower is better)
Translates to: RNNEWVQHKLTLPRC*LQPKQKTNALSQSD
Trigger: ATCTGATTGTGATAGTGCATTTGTCTTTTGCTTGGGCTGGAGCAAACACCTGGGGAGGGTCAGTTTGTGTTGGACCCACTCATTGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR-3UTR GCA 90 bp CTCAGAAACAATGAGTGGGTCCAACACAAACTGACCCTCCCCAGGTGTTTGCTCCAAGCAAAAGACAAATaGACTATCACAATCAGATCA +
Preference number: 2 (lower is better)
Translates to: LRNNEWVQHKLTLPRCLLQAKDK*TITIRS
Trigger: TGATCTGATTGTGATAGTGCATTTGTCTTTTGCTTG...GAGCAAACACCTGGGGAGGGTCAGTTTGTGTTGGACCCACTCATTGTTTCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR-3UTR GCA 90 bp ATTTCTAAGGAATGGATTAGTTCTTGGTCATGGGTTAGTAAAAGGGAAACCATTCCTCCTTGGCCCCTCTaGCTGATTTCATGGGATACT +
Preference number: 2 (lower is better)
Translates to: ISKEWISSWSWVSKRETIPPWPL*LISWDT
Trigger: AGTATCCCATGAAATCAGGCAGAGGGGCCAAGGAGG...AATGGTTTCCCTTTTACTAACCCATGACCAAGAACTAATCCATTCCTTAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR-3UTR TCA 90 bp CACACACACACACATATACACACACACCGTAATGGTGAAATGTGCCGACTACTAAGACGACAAAAATCATaGAGGTGGTATGCAAGATTT +
Preference number: 2 (lower is better)
Translates to: HTHTHIHTHRNGEMCRLLRRQKS*RWYARF
Trigger: AAATCTTGCATACCACCTTCATGATTTTTGTCGTCT...TAGTAGTCGGCACATTTCACCATTACGGTGTGTGTGTATATGTGTGTGTGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR TCA 72 bp GAGGGCCAAGGTCACAGTGTGGACGCGCACGGGCTCTaGAGTCAGACTTCTAGGGTCACATCCCGGCTCTCC +
Preference number: 3 (lower is better)
Translates to: EGQGHSVDAHGL*SQTSRVTSRLS
Trigger: GGAGAGCCGGGATGTGACCCTAGAAGTCTGACTTCAGAGCCCGTGCGCGTCCACACTGTGACCTTGGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR CCA 72 bp ACAAGCAGGGAAGGCAGGAGGGCCAAGGTCACAGTGTaGACGCGCACGGGCTCTGAAGTCAGACTTCTAGGG +
Preference number: 3 (lower is better)
Translates to: TSREGRRAKVTV*TRTGSEVRLLG
Trigger: CCCTAGAAGTCTGACTTCAGAGCCCGTGCGCGTCCACACTGTGACCTTGGCCCTCCTGCCTTCCCTGCTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR-3UTR CAA 90 bp ACATCCCGGCTCTCCTGCTTGTTCCACTCTCTAAGCTTGGGCAGGTCACTTGGCACCCTCCCCAGGTGTTaGCTCCAGCCCAAGCAAAAG +
Preference number: 3 (lower is better)
Translates to: TSRLSCLFHSLSLGRSLGTLPRC*LQPKQK
Trigger: CTTTTGCTTGGGCTGGAGCAAACACCTGGGGAGGGT...GCCAAGTGACCTGCCCAAGCTTAGAGAGTGGAACAAGCAGGAGAGCCGGGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR GCA 72 bp GCCTGCAGGACTCTGTCACCAGCTCGAAGCTCAAACTaGAAGTGGACCCACAGGACGTGCACTGGGAACACA +
Preference number: 3 (lower is better)
Translates to: ACRTLSPARSSN*KWTHRTCTGNT
Trigger: TGTGTTCCCAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAGTCCTGCAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR GCA 72 bp GTGAGATATCTGCCCTGCGCTCTGCTGCTCTCTGCCTaGAGGACTCTGTCACCAGCTCGAAGCTCAAACTGC +
Preference number: 3 (lower is better)
Translates to: VRYLPCALLLSA*RTLSPARSSNC
Trigger: GCAGTTTGAGCTTCGAGCTGGTGACAGAGTCCTGCAGGCAGAGAGCAGCAGAGCGCAGGGCAGATATCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR GCA 72 bp GGATGTGAGATATCTGCCCTGCGCTCTGCTGCTCTCTaGCTGCAGGACTCTGTCACCAGCTCGAAGCTCAAA +
Preference number: 3 (lower is better)
Translates to: GCEISALRSAAL*LQDSVTSSKLK
Trigger: TTTGAGCTTCGAGCTGGTGACAGAGTCCTGCAGGCAGAGAGCAGCAGAGCGCAGGGCAGATATCTCACATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR CCA 72 bp CAAGATTTGCCTCCTTGGCCCCTCTGCCTGATTTCATaGGATACTAAAAACAAGCAGGGAAGGCAGGAGGGC +
Preference number: 3 (lower is better)
Translates to: QDLPPWPLCLIS*DTKNKQGRQEG
Trigger: GCCCTCCTGCCTTCCCTGCTTGTTTTTAGTATCCCATGAAATCAGGCAGAGGGGCCAAGGAGGCAAATCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR TCA 72 bp GTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAATaGGTGGGTCCAACACAAACTGACCCTCCCCAGGTG +
Preference number: 3 (lower is better)
Translates to: VHPPNFGSSQKQ*VGPTQTDPPQV
Trigger: CACCTGGGGAGGGTCAGTTTGTGTTGGACCCACTCATTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR TCA 72 bp GTGGTATGCAAGATTTGCCTCCTTGGCCCCTCTGCCTaGTTTCATGGGATACTAAAAACAAGCAGGGAAGGC +
Preference number: 3 (lower is better)
Translates to: VVCKICLLGPSA*FHGILKTSREG
Trigger: GCCTTCCCTGCTTGTTTTTAGTATCCCATGAAATCAGGCAGAGGGGCCAAGGAGGCAAATCTTGCATACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR CCA 72 bp AAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTaGGAACACACAGTAACCCAATTGGTTGGGTTCTTT +
Preference number: 3 (lower is better)
Translates to: KLKLQVDPQDVH*EHTVTQLVGFF
Trigger: AAAGAACCCAACCAATTGGGTTACTGTGTGTTCCCAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR-3UTR CAA 90 bp ATTTCTAAGGAATGGATTAGTTCTTGGTCATGGGTTAGTAAAAGGGAAACCATTTACCAGGGGCTGATCTaGGTCAGCTGTTGGCGGAGG +
Preference number: 3 (lower is better)
Translates to: ISKEWISSWSWVSKRETIYQGLI*VSCWRR
Trigger: CCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTA...AATGGTTTCCCTTTTACTAACCCATGACCAAGAACTAATCCATTCCTTAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR CCA 72 bp TATACCATTTCTAAGGAATGGATTAGTTCTTGGTCATaGGTTAGTAAAAGGGAAACCATTATAACAACAGCA +
Preference number: 3 (lower is better)
Translates to: YTISKEWISSWS*VSKRETIITTA
Trigger: TGCTGTTGTTATAATGGTTTCCCTTTTACTAACCCATGACCAAGAACTAATCCATTCCTTAGAAATGGTATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp ACATCCCGGCTCTCCTGCTTGTTCCACTCTCTAAGCTTGGGCAGGTCACTTGGCGGGTGGGGCGGTGAGTaGGCGCTAATGGCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: TSRLSCLFHSLSLGRSLGGWGGE*ALMARL
Trigger: CAGCCGGGCCATTAGCGCGCACTCACCGCCCCACCC...GCCAAGTGACCTGCCCAAGCTTAGAGAGTGGAACAAGCAGGAGAGCCGGGATGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp CTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGGGTCGGGTCGCCATTCCTaGAGACCACTAGGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: LSPARSSNCKWTHRTCTGSGRHS*RPLGSV
Trigger: CACGGAGCCTAGTGGTCTTCAGGAATGGCGACCCGA...CCCAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp CTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGGGCCACAGGGCGCTGCATaGCCTCTGTCAGGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: LSPARSSNCKWTHRTCTGPQGAA*PLSGAV
Trigger: TACAGCACCTGACAGAGGTCATGCAGCGCCCTGTGG...CCCAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp CTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGGGCGCTCTGCTGCTCTCTaGCTGCAGGACTCTGTCACC +
Preference number: 4 (lower is better)
Translates to: LSPARSSNCKWTHRTCTGRSAAL*LQDSVT
Trigger: GGTGACAGAGTCCTGCAGGCAGAGAGCAGCAGAGCG...CCCAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp GGGTACCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAGTGAGATATCTGCCCTaGGCTCTGCTGCTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GYPRYQGLILVSCWRRLSVRYLP*ALLLSA
Trigger: GGCAGAGAGCAGCAGAGCGCAGGGCAGATATCTCAC...TGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGGTACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp CCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAGTGCAAGCGACAGGCCCAAGTaGGCCCTTTCAGGAGATGGT +
Preference number: 4 (lower is better)
Translates to: PQIPGADLGQLLAEAVSASDRPK*ALSGDG
Trigger: ACCATCTCCTGAAAGGGCCCACTTGGGCCTGTCGCT...TGCACTGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp CCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAGTGCATCAAAAGCTACATCCTaGCCTCTCCGGGGCTGGCAA +
Preference number: 4 (lower is better)
Translates to: PQIPGADLGQLLAEAVSASKATS*PLRGWQ
Trigger: TTGCCAGCCCCGGAGAGGTCAGGATGTAGCTTTTGA...TGCACTGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp CTCAGAAACAATGAGTGGGTCCAACACAAACTGACCCTCCCCAGGTGTTTGCTCAGGCGCGTGATGCTGTaGCTGCCCCGAGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: LRNNEWVQHKLTLPRCLLRRVML*LPRGVL
Trigger: CAGCACCCCTCGGGGCAGGCACAGCATCACGCGCCT...GAGCAAACACCTGGGGAGGGTCAGTTTGTGTTGGACCCACTCATTGTTTCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp ACTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTTGCCCTGCGCTCTGCTaGTCTCTGCCTGCAGGACTC +
Preference number: 4 (lower is better)
Translates to: TLSPARSSNCKWTHRTCTCPALC*SLPAGL
Trigger: GAGTCCTGCAGGCAGAGAGCAGCAGAGCGCAGGGCA...AGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp CCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAGTGCAGTGGTATGCAAGATTTaGCTCCTTGGCCCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PQIPGADLGQLLAEAVSAVVCKI*LLGPSA
Trigger: GGCAGAGGGGCCAAGGAGGCAAATCTTGCATACCAC...TGCACTGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAATACGGGGTGGGGCGGTaGGTGCGCGCTAATGGCCCG +
Preference number: 4 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQYGVGR*VRANGP
Trigger: CGGGCCATTAGCGCGCACTCACCGCCCCACCCCGTA...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp CCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAGTGCAAAGGAAGAGCTGCTCTaGGCTGTCCTTGCGAAGACT +
Preference number: 4 (lower is better)
Translates to: PQIPGADLGQLLAEAVSAKEELL*AVLAKT
Trigger: AGTCTTCGCAAGGACAGCTCAGAGCAGCTCTTCCTT...TGCACTGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp CTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGGGCCCTCCCCAGGTGTTTaGTCCAGCCCAAGCAAAAGA +
Preference number: 4 (lower is better)
Translates to: LSPARSSNCKWTHRTCTGPSPGV*SSPSKR
Trigger: TCTTTTGCTTGGGCTGGAGCAAACACCTGGGGAGGG...CCCAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp ACATCCCGGCTCTCCTGCTTGTTCCACTCTCTAAGCTTGGGCAGGTCACTTGGCCTGCTGCTCTCTGCCTaGAGGACTCTGTCACCAGCT +
Preference number: 4 (lower is better)
Translates to: TSRLSCLFHSLSLGRSLGLLLSA*RTLSPA
Trigger: AGCTGGTGACAGAGTCCTGCAGGCAGAGAGCAGCAG...GCCAAGTGACCTGCCCAAGCTTAGAGAGTGGAACAAGCAGGAGAGCCGGGATGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR CAA 72 bp CAGCAGTATGGGTACCCCAGATACCAGGGGCTGATCTaGGTCAGCTGTTGGCGGAGGCTGTCAGTGCATCCT +
Preference number: 4 (lower is better)
Translates to: QQYGYPRYQGLI*VSCWRRLSVHP
Trigger: AGGATGCACTGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGGTACCCATACTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp CCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAGTGCAATTTCCCCATCCTCTTaGTCTCGTGCCAACCATCGT +
Preference number: 4 (lower is better)
Translates to: PQIPGADLGQLLAEAVSAISPSS*SRANHR
Trigger: ACGATGGTTGGCACGAGATCAAGAGGATGGGGAAAT...TGCACTGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp ACTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTTGGAGACACAGGGCCTaGCACAGGCTTGTAGCAAGC +
Preference number: 4 (lower is better)
Translates to: TLSPARSSNCKWTHRTCTWRHRA*HRLVAS
Trigger: GCTTGCTACAAGCCTGTGTCAGGCCCTGTGTCTCCA...AGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp CCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAGTGCACATACACCCAGAGAGTaGCATTGGCTTGAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: PQIPGADLGQLLAEAVSAHTPRE*HWLEFL
Trigger: CAGGAACTCAAGCCAATGTCACTCTCTGGGTGTATG...TGCACTGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp ACATCCCGGCTCTCCTGCTTGTTCCACTCTCTAAGCTTGGGCAGGTCACTTGGCACATCCCCATCTGCCTaGATCCGAGACAGCCATACG +
Preference number: 4 (lower is better)
Translates to: TSRLSCLFHSLSLGRSLGTSPSA*IRDSHT
Trigger: CGTATGGCTGTCTCGGATTCAGGCAGATGGGGATGT...GCCAAGTGACCTGCCCAAGCTTAGAGAGTGGAACAAGCAGGAGAGCCGGGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp GGGTACCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCATCCGGGGCTGGCAAATaGGTTTTAGCTTATGTGCCA +
Preference number: 4 (lower is better)
Translates to: GYPRYQGLILVSCWRRLSSGAGK*VLAYVP
Trigger: TGGCACATAAGCTAAAACTCATTTGCCAGCCCCGGA...TGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGGTACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp CCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAGTGCAACTGTGCCATCTGGATaGAAACGGACAAACCCTCCA +
Preference number: 4 (lower is better)
Translates to: PQIPGADLGQLLAEAVSATVPSG*KRTNPP
Trigger: TGGAGGGTTTGTCCGTTTGCATCCAGATGGCACAGT...TGCACTGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp CTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGGGGTGACCAGGAACCAGTaGCGACTCAAGAAGTGCACA +
Preference number: 4 (lower is better)
Translates to: LSPARSSNCKWTHRTCTGVTRNQ*RLKKCT
Trigger: TGTGCACTTCTTGAGTCGGCACTGGTTCCTGGTCAC...CCCAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp ACATCCCGGCTCTCCTGCTTGTTCCACTCTCTAAGCTTGGGCAGGTCACTTGGCTGCATGGTCACCCTCTaGAAGTTCCACTCGGGTTGC +
Preference number: 4 (lower is better)
Translates to: TSRLSCLFHSLSLGRSLGCMVTL*KFHSGC
Trigger: GCAACCCGAGTGGAACTTGCAGAGGGTGACCATGCA...GCCAAGTGACCTGCCCAAGCTTAGAGAGTGGAACAAGCAGGAGAGCCGGGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp CTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGCTCAGACTCCGTCTCTaGATGCTTCAGCTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: LCHQLEAQTASGPTGRALLRLRL*MLQLPS
Trigger: ACTGGGCAGCTGAAGCATGCAGAGACGGAGTCTGAG...CAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp GGGTACCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAGCTGGTCCCTGCATCTaGCAAGTCACTGGTGATTAT +
Preference number: 4 (lower is better)
Translates to: GYPRYQGLILVSCWRRLSAGPCI*QVTGDY
Trigger: ATAATCACCAGTGACTTGCCAGATGCAGGGACCAGC...TGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGGTACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp CCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAGTGCACAAGATTTGCCTCCTTaGCCCCTCTGCCTGATTTCA +
Preference number: 4 (lower is better)
Translates to: PQIPGADLGQLLAEAVSAQDLPP*PLCLIS
Trigger: TGAAATCAGGCAGAGGGGCCAAGGAGGCAAATCTTG...TGCACTGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp CTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGGGGCCTGCCCATCTGACTaGAGTCCAACAAACAATCCT +
Preference number: 4 (lower is better)
Translates to: LSPARSSNCKWTHRTCTGACPSD*SPTNNP
Trigger: AGGATTGTTTGTTGGACTTCAGTCAGATGGGCAGGC...CCCAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp CTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGGGCAATGGCGTCAACTGTaGCATCTGGATGCAAACGGA +
Preference number: 4 (lower is better)
Translates to: LSPARSSNCKWTHRTCTGQWRQL*HLDANG
Trigger: TCCGTTTGCATCCAGATGGCACAGTTGACGCCATTG...CCCAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp ACATCCCGGCTCTCCTGCTTGTTCCACTCTCTAAGCTTGGGCAGGTCACTTGGCACTGGGACTACTTTCTaGGAGCAATTCCCGCTGGGT +
Preference number: 4 (lower is better)
Translates to: TSRLSCLFHSLSLGRSLGTGTTF*EQFPLG
Trigger: ACCCAGCGGGAATTGCTCGCAGAAAGTAGTCCCAGT...GCCAAGTGACCTGCCCAAGCTTAGAGAGTGGAACAAGCAGGAGAGCCGGGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp CTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGGGGTCAACTGTGCCATCTaGATGCAAACGGACAAACCC +
Preference number: 4 (lower is better)
Translates to: LSPARSSNCKWTHRTCTGVNCAI*MQTDKP
Trigger: GGGTTTGTCCGTTTGCATCCAGATGGCACAGTTGAC...CCCAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp CTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGGGCCTTTTGAAGCATATTaGAGCGACAGGCCCAAGTGG +
Preference number: 4 (lower is better)
Translates to: LSPARSSNCKWTHRTCTGPFEAY*SDRPKW
Trigger: CCACTTGGGCCTGTCGCTCCAATATGCTTCAAAAGG...CCCAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp ACATCCCGGCTCTCCTGCTTGTTCCACTCTCTAAGCTTGGGCAGGTCACTTGGCCCACAGGACGTGCACTaGGAACACACAGTAACCCAA +
Preference number: 4 (lower is better)
Translates to: TSRLSCLFHSLSLGRSLGPQDVH*EHTVTQ
Trigger: TTGGGTTACTGTGTGTTCCCAGTGCACGTCCTGTGG...GCCAAGTGACCTGCCCAAGCTTAGAGAGTGGAACAAGCAGGAGAGCCGGGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR CAA 72 bp AGTCAGACTTCTAGGGTCACATCCCGGCTCTCCTGCTaGTTCCACTCTCTAAGCTTGGGCAGGTCACTTGGC +
Preference number: 4 (lower is better)
Translates to: SQTSRVTSRLSC*FHSLSLGRSLG
Trigger: GCCAAGTGACCTGCCCAAGCTTAGAGAGTGGAACAAGCAGGAGAGCCGGGATGTGACCCTAGAAGTCTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp CTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGTCTTCATGGCCAACCTaGAATCGAGCCCCATCTGTT +
Preference number: 4 (lower is better)
Translates to: LCHQLEAQTASGPTGRALSSWPT*NRAPSV
Trigger: AACAGATGGGGCTCGATTTCAGGTTGGCCATGAAGA...CAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp GGGTACCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAGACTTATTGGCCCAGTaGCTCCTTTATCTCCATACA +
Preference number: 4 (lower is better)
Translates to: GYPRYQGLILVSCWRRLSDLLAQ*LLYLHT
Trigger: TGTATGGAGATAAAGGAGTCACTGGGCCAATAAGTC...TGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGGTACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp ACTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTATTTGTACAGCTGTCTaGGGCCAGAGTCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: TLSPARSSNCKWTHRTCTICTAV*GQSLPS
Trigger: AGAGGGGAGACTCTGGCCTCAGACAGCTGTACAAAT...AGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp CTCAGAAACAATGAGTGGGTCCAACACAAACTGACCCTCCCCAGGTGTTTGCTCGGGTCCAACACAAACTaGCCCTCCCCAGGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: LRNNEWVQHKLTLPRCLLGSNTN*PSPGVC
Trigger: GCAAACACCTGGGGAGGGTCAGTTTGTGTTGGACCC...GAGCAAACACCTGGGGAGGGTCAGTTTGTGTTGGACCCACTCATTGTTTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp CTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGGGCTTGGCCCCTCTGCCTaGTTTCATGGGATACTAAAA +
Preference number: 4 (lower is better)
Translates to: LSPARSSNCKWTHRTCTGLGPSA*FHGILK
Trigger: TTTTAGTATCCCATGAAATCAGGCAGAGGGGCCAAG...CCCAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp CTCAGAAACAATGAGTGGGTCCAACACAAACTGACCCTCCCCAGGTGTTTGCTCCAGGCTGCACCTTCCTaGCGTGGGAACATAGGTAGG +
Preference number: 4 (lower is better)
Translates to: LRNNEWVQHKLTLPRCLLQAAPS*RGNIGR
Trigger: CCTACCTATGTTCCCACGGCAGGAAGGTGCAGCCTG...GAGCAAACACCTGGGGAGGGTCAGTTTGTGTTGGACCCACTCATTGTTTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp CTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGGGTTCTTGGCTGGGTGTTaGAGACATTCCCATTGGGTT +
Preference number: 4 (lower is better)
Translates to: LSPARSSNCKWTHRTCTGFLAGC*RHSHWV
Trigger: AACCCAATGGGAATGTCTGCAACACCCAGCCAAGAA...CCCAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp CCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAGTGCACTGCACCTGTCATTGTaGCTGTGTATATGCGAATCT +
Preference number: 4 (lower is better)
Translates to: PQIPGADLGQLLAEAVSALHLSL*LCICES
Trigger: AGATTCGCATATACACAGGCACAATGACAGGTGCAG...TGCACTGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp ACTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTCCTCCTTGGCCCCTCTaGCTGATTTCATGGGATACT +
Preference number: 4 (lower is better)
Translates to: TLSPARSSNCKWTHRTCTPPWPL*LISWDT
Trigger: AGTATCCCATGAAATCAGGCAGAGGGGCCAAGGAGG...AGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp CCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAGTGCATATAAATCTGTGAGCTaGTCCCTGCATCTGGCAAGT +
Preference number: 4 (lower is better)
Translates to: PQIPGADLGQLLAEAVSAYKSVS*SLHLAS
Trigger: ACTTGCCAGATGCAGGGACCAGCTCACAGATTTATA...TGCACTGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp ACATCCCGGCTCTCCTGCTTGTTCCACTCTCTAAGCTTGGGCAGGTCACTTGGCCTGTCTTCTCTCCAATaGCGTCAACTGTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: TSRLSCLFHSLSLGRSLGLSSLQ*RQLCHL
Trigger: CAGATGGCACAGTTGACGCCATTGGAGAGAAGACAG...GCCAAGTGACCTGCCCAAGCTTAGAGAGTGGAACAAGCAGGAGAGCCGGGATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp CTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGACTCGGGTTGCTCACTaGTTCCATCATGTCCTATCC +
Preference number: 4 (lower is better)
Translates to: LCHQLEAQTASGPTGRALTRVAH*FHHVLS
Trigger: GGATAGGACATGATGGAACCAGTGAGCAACCCGAGT...CAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp CTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGGGAACACTGTTGCCGTaGTGCCGGCATTTTCAAGAT +
Preference number: 4 (lower is better)
Translates to: LCHQLEAQTASGPTGRALGTLLP*CRHFQD
Trigger: ATCTTGAAAATGCCGGCACCACGGCAACAGTGTTCC...CAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp ACTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTCGCTCTTGTAGAAACTaGTTCGCTTGGCCACAACAG +
Preference number: 4 (lower is better)
Translates to: TLSPARSSNCKWTHRTCTRSCRN*FAWPQQ
Trigger: CTGTTGTGGCCAAGCGAATCAGTTTCTACAAGAGCG...AGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp CCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAGTGCAAATAATATAAATCTGTaGGCTGGTCCCTGCATCTGG +
Preference number: 4 (lower is better)
Translates to: PQIPGADLGQLLAEAVSANNINL*AGPCIW
Trigger: CCAGATGCAGGGACCAGCTCACAGATTTATATTATT...TGCACTGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp CTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGGGAAAGGAAGCCATCTTTaGCAGGTAAAGATGGACTCG +
Preference number: 4 (lower is better)
Translates to: LSPARSSNCKWTHRTCTGKGSHL*QVKMDS
Trigger: CGAGTCCATCTTTACCTGTCAAAGATGGCTTCCTTT...CCCAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp CCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAGTGCACTTTCTTTGGTCCCATaGTGGGTATTTCCTTCCATA +
Preference number: 4 (lower is better)
Translates to: PQIPGADLGQLLAEAVSALSLVP*WVFPSI
Trigger: TATGGAAGGAAATACCCATCATGGGACCAAAGAAAG...TGCACTGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp GGGTACCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAAGTTCTCAGAAACAATaGGTGGGTCCAACACAAACT +
Preference number: 4 (lower is better)
Translates to: GYPRYQGLILVSCWRRLSSSQKQ*VGPTQT
Trigger: AGTTTGTGTTGGACCCACTCATTGTTTCTGAGAACT...TGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGGTACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp CTCAGAAACAATGAGTGGGTCCAACACAAACTGACCCTCCCCAGGTGTTTGCTCCCTGGAAGGAAGAGCTaGTCTGAGCTGTCCTTGCGA +
Preference number: 4 (lower is better)
Translates to: LRNNEWVQHKLTLPRCLLPGRKS*SELSLR
Trigger: TCGCAAGGACAGCTCAGAGCAGCTCTTCCTTCCAGG...GAGCAAACACCTGGGGAGGGTCAGTTTGTGTTGGACCCACTCATTGTTTCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp CTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGCACCACTGGCAAAGGTaGTTTCTTTGGTCCCATGAT +
Preference number: 4 (lower is better)
Translates to: LCHQLEAQTASGPTGRALHHWQR*FLWSHD
Trigger: ATCATGGGACCAAAGAAAGCACCTTTGCCAGTGGTG...CAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR CAA 72 bp ACATCCCGGCTCTCCTGCTTGTTCCACTCTCTAAGCTaGGGCAGGTCACTTGGCTTTTCCATGTGTCGGTTT +
Preference number: 4 (lower is better)
Translates to: TSRLSCLFHSLS*GRSLGFSMCRF
Trigger: AAACCGACACATGGAAAAGCCAAGTGACCTGCCCAAGCTTAGAGAGTGGAACAAGCAGGAGAGCCGGGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTACGGGGTGGGGCGGTaGGTGCGCGCTAATGGCCCG +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIYGVGR*VRANGP
Trigger: CGGGCCATTAGCGCGCACTCACCGCCCCACCCCGTA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp GGGTACCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCATCAGCTATTTTGCCATaGCGATCAAAAACAACTGTG +
Preference number: 4 (lower is better)
Translates to: GYPRYQGLILVSCWRRLSSAILP*RSKTTV
Trigger: CACAGTTGTTTTTGATCGTCATGGCAAAATAGCTGA...TGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGGTACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp ACATCCCGGCTCTCCTGCTTGTTCCACTCTCTAAGCTTGGGCAGGTCACTTGGCCGCATCGGCCATCCTTaGTTCTTAGATACATTTGTG +
Preference number: 4 (lower is better)
Translates to: TSRLSCLFHSLSLGRSLGRIGHP*FLDTFV
Trigger: CACAAATGTATCTAAGAATCAAGGATGGCCGATGCG...GCCAAGTGACCTGCCCAAGCTTAGAGAGTGGAACAAGCAGGAGAGCCGGGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp GGGTACCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCACTGAAGCCGTATTCTTaGTGTATTTTCATCCTCAGA +
Preference number: 4 (lower is better)
Translates to: GYPRYQGLILVSCWRRLSLKPYS*CIFILR
Trigger: TCTGAGGATGAAAATACATCAAGAATACGGCTTCAG...TGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGGTACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp CCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAGTGCATTGACTTCTGGTAACTaGAACCTCAGAAAGCAAAAC +
Preference number: 4 (lower is better)
Translates to: PQIPGADLGQLLAEAVSALTSGN*NLRKQN
Trigger: GTTTTGCTTTCTGAGGTTTCAGTTACCAGAAGTCAA...TGCACTGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGGGTGGGGCGGTGAGTaGGCGCTAATGGCCCGGCTG +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIGWGGE*ALMARL
Trigger: CAGCCGGGCCATTAGCGCGCACTCACCGCCCCACCC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR GCA 90 bp CTCAGAAACAATGAGTGGGTCCAACACAAACTGACCCTCCCCAGGTGTTTGCTCGCTCTGAGCTGTCCTTaGGAAGACTTATTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: LRNNEWVQHKLTLPRCLLALSCP*EDLLAQ
Trigger: CTGGGCCAATAAGTCTTCGCAAGGACAGCTCAGAGC...GAGCAAACACCTGGGGAGGGTCAGTTTGTGTTGGACCCACTCATTGTTTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp GGGTACCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCACCAGTCTCCATCATTTaGTTCCTCTTGTATTTTAGG +
Preference number: 4 (lower is better)
Translates to: GYPRYQGLILVSCWRRLSPVSII*FLLYFR
Trigger: CCTAAAATACAAGAGGAAGCAAATGATGGAGACTGG...TGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGGTACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp GGGTACCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCATTGTGCCTGTGTATATaGGAATCTCATAAAGCACCA +
Preference number: 4 (lower is better)
Translates to: GYPRYQGLILVSCWRRLSLCLCI*ESHKAP
Trigger: TGGTGCTTTATGAGATTCGCATATACACAGGCACAA...TGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGGTACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGCGACGGCTACGGGGTaGGGCGGTGAGTGCGCGCTA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIATATG*GGECAL
Trigger: TAGCGCGCACTCACCGCCCCACCCCGTAGCCGTCGC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp CACACACACACACATATACACACACACCGTAATGGTGAAATGTGCCGACTACTATCACTGCCTGGAGGCTaGGAACCCTCCTTCCGTCCG +
Preference number: 4 (lower is better)
Translates to: HTHTHIHTHRNGEMCRLLSLPGG*EPSFRP
Trigger: CGGACGGAAGGAGGGTTCCCAGCCTCCAGGCAGTGA...TAGTAGTCGGCACATTTCACCATTACGGTGTGTGTGTATATGTGTGTGTGTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAACTCAGGATCACTGCCTaGAGGCTGGGAACCCTCCTT +
Preference number: 4 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQLRITA*RLGTLL
Trigger: AAGGAGGGTTCCCAGCCTCCAGGCAGTGATCCTGAG...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp CTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGGGTTAGGGTTAAACAGCTaGTGTTTCCCAGATCCCAAA +
Preference number: 4 (lower is better)
Translates to: LSPARSSNCKWTHRTCTGLGLNS*CFPDPK
Trigger: TTTGGGATCTGGGAAACACCAGCTGTTTAACCCTAA...CCCAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp CTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGGGAAACCATCCATTACCTaGACCTGTTCCATCATGACT +
Preference number: 4 (lower is better)
Translates to: LSPARSSNCKWTHRTCTGKPSIT*TCSIMT
Trigger: AGTCATGATGGAACAGGTCCAGGTAATGGATGGTTT...CCCAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp GGGTACCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCACTCTGCCTGATTTCATaGGATACTAAAAACAAGCAG +
Preference number: 4 (lower is better)
Translates to: GYPRYQGLILVSCWRRLSLCLIS*DTKNKQ
Trigger: CTGCTTGTTTTTAGTATCCCATGAAATCAGGCAGAG...TGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGGTACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAACGAGGGGGTGGAACTTaGCCTTCAGAAGACGTAGGA +
Preference number: 4 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQRGGGT*PSEDVG
Trigger: TCCTACGTCTTCTGAAGGTCAAGTTCCACCCCCTCG...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp ACATCCCGGCTCTCCTGCTTGTTCCACTCTCTAAGCTTGGGCAGGTCACTTGGCCTTCCATTCATCTTCTaGCAGAAGAGTCTCACTACT +
Preference number: 4 (lower is better)
Translates to: TSRLSCLFHSLSLGRSLGLPFIF*QKSLTT
Trigger: AGTAGTGAGACTCTTCTGTCAGAAGATGAATGGAAG...GCCAAGTGACCTGCCCAAGCTTAGAGAGTGGAACAAGCAGGAGAGCCGGGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp ACTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTAAGTCTTCGTTTTCCTaGATCACCTCTGGTACCGAT +
Preference number: 4 (lower is better)
Translates to: TLSPARSSNCKWTHRTCTKSSFS*ITSGTD
Trigger: ATCGGTACCAGAGGTGATTCAGGAAAACGAAGACTT...AGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCAGGCGCGTGATGCTGTaGCTGCCCCGAGGGGTGCTG +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIRRVML*LPRGVL
Trigger: CAGCACCCCTCGGGGCAGGCACAGCATCACGCGCCT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR GCA 90 bp CTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGGGACGAATCTTAAAGAGTaGTCCAATGTCTCCAACTGT +
Preference number: 4 (lower is better)
Translates to: LSPARSSNCKWTHRTCTGTNLKE*SNVSNC
Trigger: ACAGTTGGAGACATTGGAGCACTCTTTAAGATTCGT...CCCAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp CTCAGAAACAATGAGTGGGTCCAACACAAACTGACCCTCCCCAGGTGTTTGCTCTGCCGACTCAAGAAGTaGACAGCGGTTAGGCTGATA +
Preference number: 4 (lower is better)
Translates to: LRNNEWVQHKLTLPRCLLCRLKK*TAVRLI
Trigger: TATCAGCCTAACCGCTGTGCACTTCTTGAGTCGGCA...GAGCAAACACCTGGGGAGGGTCAGTTTGTGTTGGACCCACTCATTGTTTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp GGGTACCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCATCCAAGCGACACTGCTaGTACTTGAAATTTATCAAT +
Preference number: 4 (lower is better)
Translates to: GYPRYQGLILVSCWRRLSSKRHC*YLKFIN
Trigger: ATTGATAAATTTCAAGTAGCAGCAGTGTCGCTTGGA...TGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGGTACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp CCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAGTGCATTTTCCAAGCGACACTaGTGCTACTTGAAATTTATC +
Preference number: 4 (lower is better)
Translates to: PQIPGADLGQLLAEAVSAFSKRH*CYLKFI
Trigger: GATAAATTTCAAGTAGCAGCAGTGTCGCTTGGAAAA...TGCACTGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAAGGAGGGGCACCTTCCTaGACAAGTTATCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQGGAPS*TSYPAE
Trigger: CTCTGCTGGATAACTTGTCCAGGAAGGTGCCCCTCC...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp CCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAGTGCATTCATATATTGTCACTaGAAGGACAGGTTGTCCTTT +
Preference number: 4 (lower is better)
Translates to: PQIPGADLGQLLAEAVSAFIYCH*KDRLSF
Trigger: AAAGGACAACCTGTCCTTCCAGTGACAATATATGAA...TGCACTGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp ACTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTCTCATAAAGCACCACTaGCAAAGGTGCTTTCTTTGG +
Preference number: 4 (lower is better)
Translates to: TLSPARSSNCKWTHRTCTLIKHH*QRCFLW
Trigger: CCAAAGAAAGCACCTTTGCCAGTGGTGCTTTATGAG...AGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAAGCGAGCAATTCCCGCTaGGTCTTGCCATCATCTTGG +
Preference number: 4 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQASNSR*VLPSSW
Trigger: CCAAGATGATGGCAAGACCCAGCGGGAATTGCTCGC...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp CCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAGTGCAGAATGGATTAGTTCTTaGTCATGGGTTAGTAAAAGG +
Preference number: 4 (lower is better)
Translates to: PQIPGADLGQLLAEAVSAEWISS*SWVSKR
Trigger: CCTTTTACTAACCCATGACCAAGAACTAATCCATTC...TGCACTGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAATTGGCCACAACAGGATaGGTGAGGCTCAAATGGCGA +
Preference number: 4 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQLATTG*VRLKWR
Trigger: TCGCCATTTGAGCCTCACTCATCCTGTTGTGGCCAA...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp ACATCCCGGCTCTCCTGCTTGTTCCACTCTCTAAGCTTGGGCAGGTCACTTGGCGATCCAGAGTTGGTATaGCCAATACGAATCTTAAAG +
Preference number: 4 (lower is better)
Translates to: TSRLSCLFHSLSLGRSLGDPELV*PIRILK
Trigger: CTTTAAGATTCGTATTGGTCATACCAACTCTGGATC...GCCAAGTGACCTGCCCAAGCTTAGAGAGTGGAACAAGCAGGAGAGCCGGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp ACATCCCGGCTCTCCTGCTTGTTCCACTCTCTAAGCTTGGGCAGGTCACTTGGCGACACTGCTGCTACTTaGAATTTATCAATCTGTCCT +
Preference number: 4 (lower is better)
Translates to: TSRLSCLFHSLSLGRSLGDTAAT*NLSICP
Trigger: AGGACAGATTGATAAATTTCAAGTAGCAGCAGTGTC...GCCAAGTGACCTGCCCAAGCTTAGAGAGTGGAACAAGCAGGAGAGCCGGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp CTCAGAAACAATGAGTGGGTCCAACACAAACTGACCCTCCCCAGGTGTTTGCTCCCTGTGGCACCAAGTTaGCAAGTATTTGAGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LRNNEWVQHKLTLPRCLLPVAPS*QVFEAS
Trigger: TGAAGCCTCAAATACTTGTCAACTTGGTGCCACAGG...GAGCAAACACCTGGGGAGGGTCAGTTTGTGTTGGACCCACTCATTGTTTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp CTCAGAAACAATGAGTGGGTCCAACACAAACTGACCCTCCCCAGGTGTTTGCTCATGACCTCTGTCAGGTaGTGTAGAAATGCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: LRNNEWVQHKLTLPRCLLMTSVR*CRNASK
Trigger: CTTCGAGGCATTTCTACAGCACCTGACAGAGGTCAT...GAGCAAACACCTGGGGAGGGTCAGTTTGTGTTGGACCCACTCATTGTTTCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp ACATCCCGGCTCTCCTGCTTGTTCCACTCTCTAAGCTTGGGCAGGTCACTTGGCAGAAATGTAGACGTTTaGTACTGTTCCAGCATTCCA +
Preference number: 4 (lower is better)
Translates to: TSRLSCLFHSLSLGRSLGRNVDV*YCSSIP
Trigger: TGGAATGCTGGAACAGTAGCAAACGTCTACATTTCT...GCCAAGTGACCTGCCCAAGCTTAGAGAGTGGAACAAGCAGGAGAGCCGGGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAAACACTGTTGCCGTGGTaGCGGCATTTTCAAGATCCC +
Preference number: 4 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQTLLPW*RHFQDP
Trigger: GGGATCTTGAAAATGCCGGCACCACGGCAACAGTGT...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp ACTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTCATCTAGCCATCTGTTaGATAGAAACAGCACCTCTT +
Preference number: 4 (lower is better)
Translates to: TLSPARSSNCKWTHRTCTHLAIC*IETAPL
Trigger: AAGAGGTGCTGTTTCTATGCAACAGATGGCTAGATG...AGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp CCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAGTGCACAAGCAAAAGACAAATaGACTATCACAATCAGATCA +
Preference number: 4 (lower is better)
Translates to: PQIPGADLGQLLAEAVSAQAKDK*TITIRS
Trigger: TGATCTGATTGTGATAGTGCATTTGTCTTTTGCTTG...TGCACTGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp GGGTACCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAAGTAACCCAATTGGTTaGGTTCTTTCTACATTTTCT +
Preference number: 4 (lower is better)
Translates to: GYPRYQGLILVSCWRRLSSNPIG*VLSTFS
Trigger: AGAAAATGTAGAAAGAACCCAACCAATTGGGTTACT...TGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGGTACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAAAGCTCAAACTGCAAGTaGACCCACAGGACGTGCACT +
Preference number: 4 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQSSNCK*THRTCT
Trigger: AGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCT...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp CTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGGGACCATTTCTAAGGAATaGATTAGTTCTTGGTCATGG +
Preference number: 4 (lower is better)
Translates to: LSPARSSNCKWTHRTCTGTISKE*ISSWSW
Trigger: CCATGACCAAGAACTAATCCATTCCTTAGAAATGGT...CCCAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp CTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGAAAGACAGGTGTCTTTaGTATCAAAAGCTACATCCT +
Preference number: 4 (lower is better)
Translates to: LCHQLEAQTASGPTGRALKDRCL*YQKLHP
Trigger: AGGATGTAGCTTTTGATATCAAAGACACCTGTCTTT...CAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp CTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGAAACTTCCAGCTTTCTaGAGTCCATGTTTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: LCHQLEAQTASGPTGRALKLPAF*SPCFFS
Trigger: AGAAAAGAAACATGGACTGCAGAAAGCTGGAAGTTT...CAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp CTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGGGATGCATCAGCTATTTTaGCATGACGATCAAAAACAA +
Preference number: 4 (lower is better)
Translates to: LSPARSSNCKWTHRTCTGMHQLF*HDDQKQ
Trigger: TTGTTTTTGATCGTCATGGCAAAATAGCTGATGCAT...CCCAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp CACACACACACACATATACACACACACCGTAATGGTGAAATGTGCCGACTACTAGCTCGAAGCTCAAACTaGAAGTGGACCCACAGGACG +
Preference number: 4 (lower is better)
Translates to: HTHTHIHTHRNGEMCRLLARSSN*KWTHRT
Trigger: CGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGC...TAGTAGTCGGCACATTTCACCATTACGGTGTGTGTGTATATGTGTGTGTGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTCACTGCCTGGAGGCTaGGAACCCTCCTTCCGTCCG +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFISLPGG*EPSFRP
Trigger: CGGACGGAAGGAGGGTTCCCAGCCTCCAGGCAGTGA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp ACTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTATCTTTTCTTCTTCTTaGCTGGGTGTTGCAGACATT +
Preference number: 4 (lower is better)
Translates to: TLSPARSSNCKWTHRTCTIFSSS*LGVADI
Trigger: AATGTCTGCAACACCCAGCCAAGAAGAAGAAAAGAT...AGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp CTCAGAAACAATGAGTGGGTCCAACACAAACTGACCCTCCCCAGGTGTTTGCTCCTTGCGAAGACTTATTaGCCCAGTGACTCCTTTATC +
Preference number: 4 (lower is better)
Translates to: LRNNEWVQHKLTLPRCLLLAKTY*PSDSFI
Trigger: GATAAAGGAGTCACTGGGCCAATAAGTCTTCGCAAG...GAGCAAACACCTGGGGAGGGTCAGTTTGTGTTGGACCCACTCATTGTTTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAATCTCTCCTACTGCACTaGGACTACTTTCTGCGAGCA +
Preference number: 4 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQSLLLH*DYFLRA
Trigger: TGCTCGCAGAAAGTAGTCCCAGTGCAGTAGGAGAGA...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAACTTGGGCAGGTCACTTaGCTTTTCCATGTGTCGGTT +
Preference number: 4 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQLGQVT*LFHVSV
Trigger: AACCGACACATGGAAAAGCCAAGTGACCTGCCCAAG...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp ACATCCCGGCTCTCCTGCTTGTTCCACTCTCTAAGCTTGGGCAGGTCACTTGGCTTCTTACCTGTAATATaGTCTGCTGGACACTTTAGA +
Preference number: 4 (lower is better)
Translates to: TSRLSCLFHSLSLGRSLGFLPVI*SAGHFR
Trigger: TCTAAAGTGTCCAGCAGACCATATTACAGGTAAGAA...GCCAAGTGACCTGCCCAAGCTTAGAGAGTGGAACAAGCAGGAGAGCCGGGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR CAA 72 bp GCAGACGACAAAAATCATGAAGGTGGTATGCAAGATTaGCCTCCTTGGCCCCTCTGCCTGATTTCATGGGAT +
Preference number: 4 (lower is better)
Translates to: ADDKNHEGGMQD*PPWPLCLISWD
Trigger: ATCCCATGAAATCAGGCAGAGGGGCCAAGGAGGCAAATCTTGCATACCACCTTCATGATTTTTGTCGTCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTCGGGTCGCCATTCCTaGAGACCACTAGGCTCCGTG +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFISGRHS*RPLGSV
Trigger: CACGGAGCCTAGTGGTCTTCAGGAATGGCGACCCGA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCCACAGGGCGCTGCATaGCCTCTGTCAGGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIPQGAA*PLSGAV
Trigger: TACAGCACCTGACAGAGGTCATGCAGCGCCCTGTGG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp ACTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTAGACGACAAAAATCATaGAGGTGGTATGCAAGATTT +
Preference number: 4 (lower is better)
Translates to: TLSPARSSNCKWTHRTCTRRQKS*RWYARF
Trigger: AAATCTTGCATACCACCTTCATGATTTTTGTCGTCT...AGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAAATCCTCTTGATCTCGTaGCAACCATCGTTGAACAGG +
Preference number: 4 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQILLIS*QPSLNR
Trigger: CCTGTTCAACGATGGTTGGCACGAGATCAAGAGGAT...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAACACAAATCTCCAAGGTaGACAGCCTCCAGGAAAAAG +
Preference number: 4 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQHKSPR*TASRKK
Trigger: CTTTTTCCTGGAGGCTGTGCACCTTGGAGATTTGTG...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp ACATCCCGGCTCTCCTGCTTGTTCCACTCTCTAAGCTTGGGCAGGTCACTTGGCTTAAGTTCCAATTTCTaGCCTGAGAAGATAAAGAGA +
Preference number: 4 (lower is better)
Translates to: TSRLSCLFHSLSLGRSLGLSSNF*PEKIKR
Trigger: TCTCTTTATCTTCTCAGGGCAGAAATTGGAACTTAA...GCCAAGTGACCTGCCCAAGCTTAGAGAGTGGAACAAGCAGGAGAGCCGGGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAAATTCCCGCTGGGTCTTaGCATCATCTTGGTACTCAT +
Preference number: 4 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQIPAGS*HHLGTH
Trigger: ATGAGTACCAAGATGATGGCAAGACCCAGCGGGAAT...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp CACACACACACACATATACACACACACCGTAATGGTGAAATGTGCCGACTACTACCCAGTCTCTCCTACTaGACTGGGACTACTTTCTGC +
Preference number: 4 (lower is better)
Translates to: HTHTHIHTHRNGEMCRLLPSLSY*TGTTFC
Trigger: GCAGAAAGTAGTCCCAGTGCAGTAGGAGAGACTGGG...TAGTAGTCGGCACATTTCACCATTACGGTGTGTGTGTATATGTGTGTGTGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCCACAACAGGATGAGTaGGGCTCAAATGGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIPQQDE*GSNGEG
Trigger: CCCCTCGCCATTTGAGCCTCACTCATCCTGTTGTGG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp CACACACACACACATATACACACACACCGTAATGGTGAAATGTGCCGACTACTATCAAAAACAACTGTGTaGCCAGGAACCAGTGCCGAC +
Preference number: 4 (lower is better)
Translates to: HTHTHIHTHRNGEMCRLLSKTTV*PGTSAD
Trigger: GTCGGCACTGGTTCCTGGTCACACAGTTGTTTTTGA...TAGTAGTCGGCACATTTCACCATTACGGTGTGTGTGTATATGTGTGTGTGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp CTCAGAAACAATGAGTGGGTCCAACACAAACTGACCCTCCCCAGGTGTTTGCTCTGGATATTTGGAATATaGTTTAGGATGAGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: LRNNEWVQHKLTLPRCLLWIFGI*FRMRPS
Trigger: GCTTGGCCTCATCCTAAATCATATTCCAAATATCCA...GAGCAAACACCTGGGGAGGGTCAGTTTGTGTTGGACCCACTCATTGTTTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCAGGCTGCACCTTCCTaGCGTGGGAACATAGGTAGG +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIQAAPS*RGNIGR
Trigger: CCTACCTATGTTCCCACGGCAGGAAGGTGCAGCCTG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTCCAGGTCTACAGGCTaGACCTTCCTGCCGTGGGAA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFISRSTG*TFLPWE
Trigger: TTCCCACGGCAGGAAGGTGCAGCCTGTAGACCTGGA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTTGACCACAGGGCGCTaGATGACCTCTGTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFILTTGR*MTSVRC
Trigger: GCACCTGACAGAGGTCATGCAGCGCCCTGTGGTCAA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCTCAGGATCACTGCCTaGAGGCTGGGAACCCTCCTT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFILRITA*RLGTLL
Trigger: AAGGAGGGTTCCCAGCCTCCAGGCAGTGATCCTGAG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGGGCACATGCCTCACTaGCAGAGCAACCTCCATCCA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIGHMPH*QSNLHP
Trigger: TGGATGGAGGTTGCTCTGCCAGTGAGGCATGTGCCC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp ACTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTTTCCATAAAGATATATaGGGGCTGAACTTCTATGTT +
Preference number: 4 (lower is better)
Translates to: TLSPARSSNCKWTHRTCTFHKDI*GLNFYV
Trigger: AACATAGAAGTTCAGCCCCCATATATCTTTATGGAA...AGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp CACACACACACACATATACACACACACCGTAATGGTGAAATGTGCCGACTACTAAAACCAACCATTTCCTaGGCCAAGTCCATCATGGCC +
Preference number: 4 (lower is better)
Translates to: HTHTHIHTHRNGEMCRLLKPTIS*AKSIMA
Trigger: GGCCATGATGGACTTGGCCCAGGAAATGGTTGGTTT...TAGTAGTCGGCACATTTCACCATTACGGTGTGTGTGTATATGTGTGTGTGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAATCCAACAAACAATCCTaGGCTCTTCGTAGATTCCAG +
Preference number: 4 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQSNKQS*ALRRFQ
Trigger: CTGGAATCTACGAAGAGCCCAGGATTGTTTGTTGGA...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAATTTCTTCTTCTTGGCTaGGTGTTGCAGACATTCCCA +
Preference number: 4 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQFLLLG*VLQTFP
Trigger: TGGGAATGTCTGCAACACCCAGCCAAGAAGAAGAAA...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCGAGGGGGTGGAACTTaGCCTTCAGAAGACGTAGGA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIRGGGT*PSEDVG
Trigger: TCCTACGTCTTCTGAAGGTCAAGTTCCACCCCCTCG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAATGCAAATCCCAGAGCTaGTTTTATGCACTTTCCAGT +
Preference number: 4 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQCKSQS*FYALSS
Trigger: ACTGGAAAGTGCATAAAATCAGCTCTGGGATTTGCA...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp CACACACACACACATATACACACACACCGTAATGGTGAAATGTGCCGACTACTAACAGTACCAGTACTGTaGTTTGTCACTGGCCTCACA +
Preference number: 4 (lower is better)
Translates to: HTHTHIHTHRNGEMCRLLTVPVL*FVTGLT
Trigger: TGTGAGGCCAGTGACAAATCACAGTACTGGTACTGT...TAGTAGTCGGCACATTTCACCATTACGGTGTGTGTGTATATGTGTGTGTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp CACACACACACACATATACACACACACCGTAATGGTGAAATGTGCCGACTACTAATAAAGGAACACTGTTaGCGTGGTGCCGGCATTTTC +
Preference number: 4 (lower is better)
Translates to: HTHTHIHTHRNGEMCRLLIKEHC*RGAGIF
Trigger: GAAAATGCCGGCACCACGGCAACAGTGTTCCTTTAT...TAGTAGTCGGCACATTTCACCATTACGGTGTGTGTGTATATGTGTGTGTGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAAGTCGGTTTCCTCATCTaGAAAATGTGGGTGATGATA +
Preference number: 4 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQVGFLI*KMWVMI
Trigger: TATCATCACCCACATTTTGCAGATGAGGAAACCGAC...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGGAGGGGCACCTTCCTaGACAAGTTATCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIGGAPS*TSYPAE
Trigger: CTCTGCTGGATAACTTGTCCAGGAAGGTGCCCCTCC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp CACACACACACACATATACACACACACCGTAATGGTGAAATGTGCCGACTACTAGGGCCAAGTCCATCATaGCCTATCACAATCTTACAC +
Preference number: 4 (lower is better)
Translates to: HTHTHIHTHRNGEMCRLLGPSPS*PITILH
Trigger: GTGTAAGATTGTGATAGGCCATGATGGACTTGGCCC...TAGTAGTCGGCACATTTCACCATTACGGTGTGTGTGTATATGTGTGTGTGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAATGCAGACATTCCCATTaGGTTTTCTCTGCCAAATTG +
Preference number: 4 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQCRHSH*VFSAKL
Trigger: CAATTTGGCAGAGAAAACCCAATGGGAATGTCTGCA...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTTGGCCACAACAGGATaGGTGAGGCTCAAATGGCGA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFILATTG*VRLKWR
Trigger: TCGCCATTTGAGCCTCACTCATCCTGTTGTGGCCAA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGTCAGGCCGATAGTCTaGCCAATCAGAAGTCACTGG +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIVRPIV*PIRSHW
Trigger: CCAGTGACTTCTGATTGGTCAGACTATCGGCCTGAC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAAAAGATATATGGGGGCTaGACTTCTATGTTGTCCATA +
Preference number: 4 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQKIYGG*TSMLSI
Trigger: TATGGACAACATAGAAGTTCAGCCCCCATATATCTT...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp ATTTCTAAGGAATGGATTAGTTCTTGGTCATGGGTTAGTAAAAGGGAAACCATTCCAGATACCAGGGGCTaGTCTTGGTCAGCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: ISKEWISSWSWVSKRETIPDTRG*SWSAVG
Trigger: GCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGG...AATGGTTTCCCTTTTACTAACCCATGACCAAGAACTAATCCATTCCTTAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp ATTTCTAAGGAATGGATTAGTTCTTGGTCATGGGTTAGTAAAAGGGAAACCATTTTGACCACAGGGCGCTaGATGACCTCTGTCAGGTGC +
Preference number: 4 (lower is better)
Translates to: ISKEWISSWSWVSKRETILTTGR*MTSVRC
Trigger: GCACCTGACAGAGGTCATGCAGCGCCCTGTGGTCAA...AATGGTTTCCCTTTTACTAACCCATGACCAAGAACTAATCCATTCCTTAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp ATTTCTAAGGAATGGATTAGTTCTTGGTCATGGGTTAGTAAAAGGGAAACCATTGCAGCTGTATCTCCTTaGAGTGCCAGGAAGGGGAGG +
Preference number: 4 (lower is better)
Translates to: ISKEWISSWSWVSKRETIAAVSP*SARKGR
Trigger: CCTCCCCTTCCTGGCACTGCAAGGAGATACAGCTGC...AATGGTTTCCCTTTTACTAACCCATGACCAAGAACTAATCCATTCCTTAGAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp CACACACACACACATATACACACACACCGTAATGGTGAAATGTGCCGACTACTAATCATGAAGGTGGTATaGAAGATTTGCCTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: HTHTHIHTHRNGEMCRLLIMKVV*KICLLG
Trigger: GCCAAGGAGGCAAATCTTGCATACCACCTTCATGAT...TAGTAGTCGGCACATTTCACCATTACGGTGTGTGTGTATATGTGTGTGTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGGGTGTCCACTGATGTaGTGTCTGCATTGCCACACA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIGCPLM*CLHCHT
Trigger: TGTGTGGCAATGCAGACACCACATCAGTGGACACCC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGAGTTCATCCATCGTTaGGCCTGGGGCCAAATTACC +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIEFIHR*AWGQIT
Trigger: GGTAATTTGGCCCCAGGCCCAACGATGGATGAACTC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp CTCAGAAACAATGAGTGGGTCCAACACAAACTGACCCTCCCCAGGTGTTTGCTCAAATTGGATGACTTGTaGATAGAAGCAAACATTCTC +
Preference number: 4 (lower is better)
Translates to: LRNNEWVQHKLTLPRCLLKLDDL*IEANIL
Trigger: GAGAATGTTTGCTTCTATCCACAAGTCATCCAATTT...GAGCAAACACCTGGGGAGGGTCAGTTTGTGTTGGACCCACTCATTGTTTCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCGCTCTTGTAGAAACTaGTTCGCTTGGCCACAACAG +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIRSCRN*FAWPQQ
Trigger: CTGTTGTGGCCAAGCGAATCAGTTTCTACAAGAGCG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTTGGGGTACACACGCTaGGAGATCCCTGGTAATCTA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFILGYTR*EIPGNL
Trigger: TAGATTACCAGGGATCTCTCAGCGTGTGTACCCCAA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGCCAAACTGCCCTCTTaGTTACTGCTTCGCTCCATA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIAKLPS*LLLRSI
Trigger: TATGGAGCGAAGCAGTAATCAAGAGGGCAGTTTGGC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGGGAACACCTGCAAGTaGACCTGGCATTTGAACAAC +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIGNTCK*TWHLNN
Trigger: GTTGTTCAAATGCCAGGTTCACTTGCAGGTGTTCCC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp CACACACACACACATATACACACACACCGTAATGGTGAAATGTGCCGACTACTACTCTGCCAAATTGGATaGCTTGTGGATAGAAGCAAA +
Preference number: 4 (lower is better)
Translates to: HTHTHIHTHRNGEMCRLLLCQIG*LVDRSK
Trigger: TTTGCTTCTATCCACAAGTCATCCAATTTGGCAGAG...TAGTAGTCGGCACATTTCACCATTACGGTGTGTGTGTATATGTGTGTGTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp CACACACACACACATATACACACACACCGTAATGGTGAAATGTGCCGACTACTAGGAAATGTGTATACATaGTACCTACTCGCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: HTHTHIHTHRNGEMCRLLGNVYT*YLLAEK
Trigger: CTTCTCTGCGAGTAGGTATCATGTATACACATTTCC...TAGTAGTCGGCACATTTCACCATTACGGTGTGTGTGTATATGTGTGTGTGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCCCAGATGCCACTTCTaGTTGAGATTGCGGTGCATA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIPRCHF*LRLRCI
Trigger: TATGCACCGCAATCTCAAGCAGAAGTGGCATCTGGG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR GCA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAATTCCAGGCTTATGGATaGATTCTTCAAGTTCTTCTT +
Preference number: 4 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQFQAYG*ILQVLL
Trigger: AAGAAGAACTTGAAGAATGCATCCATAAGCCTGGAA...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCAAATGGCGAGGGGGTaGAACTTGACCTTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIQMARG*NLTFRR
Trigger: TCTTCTGAAGGTCAAGTTCCACCCCCTCGCCATTTG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp CACACACACACACATATACACACACACCGTAATGGTGAAATGTGCCGACTACTATCAGAAGACGTAGGATaGATGATGGAAAAACCAGTA +
Preference number: 4 (lower is better)
Translates to: HTHTHIHTHRNGEMCRLLSEDVG*MMEKPV
Trigger: TACTGGTTTTTCCATCATTCATCCTACGTCTTCTGA...TAGTAGTCGGCACATTTCACCATTACGGTGTGTGTGTATATGTGTGTGTGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCAGTAGAGGATGCTTCTaGAGCTGGAGCCTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFISRGCF*SWSLRN
Trigger: ATTTCTGAGGCTCCAGCTTCAGAAGCATCCTCTACT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGAAGCTTGCAATTGGTaGAGCATCAGGACTGGTAAG +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIEACNW*SIRTGK
Trigger: CTTACCAGTCCTGATGCTTCACCAATTGCAAGCTTC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCAGTTCCTCGAGTTCTaGAGAGGAGAGTTCATCCAT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIQFLEF*RGEFIH
Trigger: ATGGATGAACTCTCCTCTTCAGAACTCGAGGAACTG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp CACACACACACACATATACACACACACCGTAATGGTGAAATGTGCCGACTACTATTTCTTATTTCAACCTaGAACTCATCCTCGTGTCCT +
Preference number: 4 (lower is better)
Translates to: HTHTHIHTHRNGEMCRLLFLIST*NSSSCP
Trigger: AGGACACGAGGATGAGTTTCAGGTTGAAATAAGAAA...TAGTAGTCGGCACATTTCACCATTACGGTGTGTGTGTATATGTGTGTGTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCATGACCTCTGTCAGGTaGTGTAGAAATGCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIMTSVR*CRNASK
Trigger: CTTCGAGGCATTTCTACAGCACCTGACAGAGGTCAT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTCTCCTCTGCCAAACTaGCCTCTTGATTACTGCTTC +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFISPLPN*PLDYCF
Trigger: GAAGCAGTAATCAAGAGGGCAGTTTGGCAGAGGAGA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTGGCACAGGTTTCATTaGGAACATCCAGCAAGTCCT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIWHRFH*EHPASP
Trigger: AGGACTTGCTGGATGTTCGCAATGAAACCTGTGCCA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR GCA 90 bp ATTTCTAAGGAATGGATTAGTTCTTGGTCATGGGTTAGTAAAAGGGAAACCATTGACAACATCCCCATCTaGCTGAATCCGAGACAGCCA +
Preference number: 4 (lower is better)
Translates to: ISKEWISSWSWVSKRETIDNIPI*LNPRQP
Trigger: TGGCTGTCTCGGATTCAGGCAGATGGGGATGTTGTC...AATGGTTTCCCTTTTACTAACCCATGACCAAGAACTAATCCATTCCTTAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAACGTAATGGTGAAATGTaGCGACTACTAGATATTTAT +
Preference number: 4 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQRNGEM*RLLDIY
Trigger: ATAAATATCTAGTAGTCGGCACATTTCACCATTACG...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCCAACCTGTGTCTCATaGAGATCTTCTTCACCAGTG +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIPTCVS*RSSSPV
Trigger: CACTGGTGAAGAAGATCTCCATGAGACACAGGTTGG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGTAGGTCTCATCAATTaGGCAAGCTCCCTCATAGGT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIVGLIN*ASSLIG
Trigger: ACCTATGAGGGAGCTTGCCCAATTGATGAGACCTAC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCATCCATCGTTGGGCCTaGGGCCAAATTACCAAAATG +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIIHRWA*GQITKM
Trigger: CATTTTGGTAATTTGGCCCCAGGCCCAACGATGGAT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp ATTTCTAAGGAATGGATTAGTTCTTGGTCATGGGTTAGTAAAAGGGAAACCATTATCTTGGTCAGCTGTTaGCGGAGGCTGTCAGTGCAT +
Preference number: 4 (lower is better)
Translates to: ISKEWISSWSWVSKRETIILVSC*RRLSVH
Trigger: ATGCACTGACAGCCTCCGCCAACAGCTGACCAAGAT...AATGGTTTCCCTTTTACTAACCCATGACCAAGAACTAATCCATTCCTTAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp ATTTCTAAGGAATGGATTAGTTCTTGGTCATGGGTTAGTAAAAGGGAAACCATTTTGGGGTACACACGCTaGGAGATCCCTGGTAATCTA +
Preference number: 4 (lower is better)
Translates to: ISKEWISSWSWVSKRETILGYTR*EIPGNL
Trigger: TAGATTACCAGGGATCTCTCAGCGTGTGTACCCCAA...AATGGTTTCCCTTTTACTAACCCATGACCAAGAACTAATCCATTCCTTAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTGCTTTGCTTGGTCTTaGGTTCCCTGGATGATATCT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFICFAWS*VPWMIS
Trigger: AGATATCATCCAGGGAACTCAAGACCAAGCAAAGCA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCATGGGTTGCATCTGCTaGAATAGGACTGAACCTATC +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIMGCIC*NRTEPI
Trigger: GATAGGTTCAGTCCTATTTCAGCAGATGCAACCCAT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGTGAATACCAGGAACTaGAGCTTGCAATTGGTGAAG +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIVNTRN*SLQLVK
Trigger: CTTCACCAATTGCAAGCTTCAGTTCCTGGTATTCAC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGAACACTCTGAATGTTaGCCGTGGAACAATTTGCAG +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIEHSEC*PWNNLQ
Trigger: CTGCAAATTGTTCCACGGTCAACATTCAGAGTGTTC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCACTTAGGAACACTCTaGATGTTGACCGTGGAACAA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIHLGTL*MLTVEQ
Trigger: TTGTTCCACGGTCAACATTCAGAGTGTTCCTAAGTG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTGGTATTGCAGACATTaGCAGGAACGTAGGTCTCAT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIWYCRH*QERRSH
Trigger: ATGAGACCTACGTTCCTGTCAATGTCTGCAATACCA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCATGCTGTTGGTTATTaGGCCTGGTTCTTCAGAAGT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIHAVGY*AWFFRS
Trigger: ACTTCTGAAGAACCAGGCTCAATAACCAACAGCATG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTTTAGTTCAAGGGGTTaGGTCAGTTCCTCGAGTTCT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIFSSRG*VSSSSS
Trigger: AGAACTCGAGGAACTGACTCAACCCCTTGAACTAAA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCTCATGAAAAGGTTCTaGGTCACTACCATGAGGCAT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFILMKRF*VTTMRH
Trigger: ATGCCTCATGGTAGTGACTCAGAACCTTTTCATGAG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTCCAGCAAGTCCTCATaGAAAGGTTCTGAGTCACTA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFISSKSS*KGSESL
Trigger: TAGTGACTCAGAACCTTTTCATGAGGACTTGCTGGA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTGTGCATACTCTTTCTaGCTGATGACTACCCTTCTC +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFICAYSF*LMTTLL
Trigger: GAGAAGGGTAGTCATCAGTCAGAAAGAGTATGCACA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGATGTTTTATATGGCTaGTCACTGTCACTGTCAGGC +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIDVLYG*SLSLSG
Trigger: GCCTGACAGTGACAGTGAGCAGCCATATAAAACATC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCTGCATTGCCACACATaGCAGGATTTTCAGATGACA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFILHCHT*QDFQMT
Trigger: TGTCATCTGAAAATCCTGGCATGTGTGGCAATGCAG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp ATTTCTAAGGAATGGATTAGTTCTTGGTCATGGGTTAGTAAAAGGGAAACCATTCAAATGGCGAGGGGGTaGAACTTGACCTTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: ISKEWISSWSWVSKRETIQMARG*NLTFRR
Trigger: TCTTCTGAAGGTCAAGTTCCACCCCCTCGCCATTTG...AATGGTTTCCCTTTTACTAACCCATGACCAAGAACTAATCCATTCCTTAGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTCACTGAGTCCAAAGTaGCTTGTAGTTGACTCCACT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFISLSPK*LVVDST
Trigger: AGTGGAGTCAACTACAAGCCACTTTGGACTCAGTGA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCAGTGCACATCTCACATaGAGAGCAAGTCACTTCCAA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFISAHLT*RASHFQ
Trigger: TTGGAAGTGACTTGCTCTCCATGTGAGATGTGCACT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGTTCGCCACTGTCATTaGGATCATCACTGGATGTTT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIVRHCH*DHHWMF
Trigger: AAACATCCAGTGATGATCCCAATGACAGTGGCGAAC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp ATTTCTAAGGAATGGATTAGTTCTTGGTCATGGGTTAGTAAAAGGGAAACCATTACTGTGATTTGTCACTaGCCTCACAGCGCAACAGCA +
Preference number: 4 (lower is better)
Translates to: ISKEWISSWSWVSKRETITVICH*PHSATA
Trigger: TGCTGTTGCGCTGTGAGGCCAGTGACAAATCACAGT...AATGGTTTCCCTTTTACTAACCCATGACCAAGAACTAATCCATTCCTTAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGCAAGCTGTCCATCTTaGTACCTGGAATTTATTGCT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIASCPS*YLEFIA
Trigger: AGCAATAAATTCCAGGTATCAAGATGGACAGCTTGC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTCTATAGGATCTACTTaGATGGCAGCCTCTACACTT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFISIGST*MAASTL
Trigger: AAGTGTAGAGGCTGCCATTCAAGTAGATCCTATAGA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGTATGGTTCTCCTTTTaGGCACAAGCCTTATCAGAA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIVWFSF*AQALSE
Trigger: TTCTGATAAGGCTTGTGCTCAAAAGGAGAACCATAC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCATCAGGAGAGGACTCTaGATAACTTCCAGTTTCCAT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIIRRGL*ITSSFH
Trigger: ATGGAAACTGGAAGTTATTCAGAGTCCTCTCCTGAT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTTCAGAAGAGCCAAATaGCTGCCCTTCAGAATCATA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIFRRAK*LPFRII
Trigger: TATGATTCTGAAGGGCAGTCATTTGGCTCTTCTGAA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCTTCCTCTATGTCTGTaGGGATTCTGCTATCATCAT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFILPLCL*GFCYHH
Trigger: ATGATGATAGCAGAATCCTCACAGACATAGAGGAAG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCAGTATTGGGCAATGTTaGCCACAAAGAGCATACAGT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFISIGQC*PQRAYS
Trigger: ACTGTATGCTCTTTGTGGTCAACATTGCCCAATACT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGAGGTCTTGTGTATTTaGATCCACATTACCCACAAC +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIEVLCI*IHITHN
Trigger: GTTGTGGGTAATGTGGATTCAAATACACAAGACCTC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCATTTGTCTGACCGCTaGGGTCTTGTGTATTTGAAT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIHLSDR*GLVYLN
Trigger: ATTCAAATACACAAGACCTCAGCGGTCAGACAAATG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCAAGATTTCATTTGTCTaGCCGCTGAGGTCTTGTGTA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIKISFV*PLRSCV
Trigger: TACACAAGACCTCAGCGGTCAGACAAATGAAATCTT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCTCTTACTACTTGGTTaGGATTTGTTCTTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFILLLLG*DLFLSP
Trigger: AGGGCTCAAGAACAAATCTCAACCAAGTAGTAAGAG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTCTCAAATACCCAGATaGCACTTCTGCTTGAGATTG +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFISQIPR*HFCLRL
Trigger: CAATCTCAAGCAGAAGTGGCATCTGGGTATTTGAGA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGCAGCCTCTACACTTTaGCTTTTTCTAGCTAGGTTT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIAASTL*LFLARF
Trigger: AAACCTAGCTAGAAAAAGGCAAAGTGTAGAGGCTGC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCAAGCCTTATTTACAGTaGACATCTCACATGGAGAGC +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIKPYLQ*TSHMES
Trigger: GCTCTCCATGTGAGATGTGCACTGTAAATAAGGCTT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCAATTCTTCAGTGGCTTaGTCTCCTCCATTTACCACT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFINSSVA*SPPFTT
Trigger: AGTGGTAAATGGAGGAGAGCAAGCCACTGAAGAATT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCAGATTCTTTGCGATATaGAAATCCTCGGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIRFFAI*KSSVFL
Trigger: GAGGAAGACCGAGGATTTGCATATCGCAAAGAATCT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR GCA 90 bp ATTTCTAAGGAATGGATTAGTTCTTGGTCATGGGTTAGTAAAAGGGAAACCATTAAGTTCCACTCGGGTTaGTCACTGGTTCCATCATGT +
Preference number: 4 (lower is better)
Translates to: ISKEWISSWSWVSKRETIKFHSG*SLVPSC
Trigger: ACATGATGGAACCAGTGAGCAACCCGAGTGGAACTT...AATGGTTTCCCTTTTACTAACCCATGACCAAGAACTAATCCATTCCTTAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp CACACACACACACATATACACACACACCGTAATGGTGAAATGTGCCGACTACTAAATCTAGGATCTTCTTaGTTTTCATATGTTGCATGG +
Preference number: 4 (lower is better)
Translates to: HTHTHIHTHRNGEMCRLLNLGSS*FSYVAW
Trigger: CCATGCAACATATGAAAAGCAAGAAGATCCTAGATT...TAGTAGTCGGCACATTTCACCATTACGGTGTGTGTGTATATGTGTGTGTGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGCCTCTACCTCTTCTTaGATTAATTCTTCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIASTSS*INSSVA
Trigger: AGCCACTGAAGAATTAATCCAAGAAGAGGTAGAGGC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCACTGGATGTTTTATATaGCTGCTCACTGTCACTGTC +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFITGCFI*LLTVTV
Trigger: GACAGTGACAGTGAGCAGCCATATAAAACATCCAGT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTCAGAAGACGTAGGATaGATGATGGAAAAACCAGTA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFISEDVG*MMEKPV
Trigger: TACTGGTTTTTCCATCATTCATCCTACGTCTTCTGA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCAGCACTTATTGCACTTaGCTTAAGCAGACTGTTTTC +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFISTYCT*LKQTVF
Trigger: GAAAACAGTCTGCTTAAGTCAAGTGCAATAAGTGCT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTCCAGAGTTATTACTTaGAAAATGGGTTGCATCTGC +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFISRVIT*KMGCIC
Trigger: GCAGATGCAACCCATTTTTCAAGTAATAACTCTGGA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGCAGAAATAAAGGAATaGGTGACAGATGTGCATACT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIAEIKE*VTDVHT
Trigger: AGTATGCACATCTGTCACTCATTCCTTTATTTCTGC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGTTGAGATTTGTTCTTaGGCCCTGGAATCTGTTATT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIVEICS*ALESVI
Trigger: AATAACAGATTCCAGGGCTCAAGAACAAATCTCAAC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp ATTTCTAAGGAATGGATTAGTTCTTGGTCATGGGTTAGTAAAAGGGAAACCATTTTTTGCCTGCCCATCTaGCTGAAGTCCAACAAACAA +
Preference number: 4 (lower is better)
Translates to: ISKEWISSWSWVSKRETIFCLPI*LKSNKQ
Trigger: TTGTTTGTTGGACTTCAGTCAGATGGGCAGGCAAAA...AATGGTTTCCCTTTTACTAACCCATGACCAAGAACTAATCCATTCCTTAGAAAT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCATAAAAACGATGCTTTaGTTGGTCTTGAGTTCCCTG +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIIKTML*LVLSSL
Trigger: CAGGGAACTCAAGACCAAGCAAAGCATCGTTTTTAT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTCCTCCTGGAATTCCTaGAACATAGATGAACTACTA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFISSWNS*NIDELL
Trigger: TAGTAGTTCATCTATGTTGCAGGAATTCCAGGAGGA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCTTTCAGAAGCCATTTaGCTTTGTCAATCAGTACTC +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFILSEAI*LCQSVL
Trigger: GAGTACTGATTGACAAAGGCAAATGGCTTCTGAAAG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCGTATTCGTCACATGTaGTTCATCTCATGGGAAAAA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIRIRHM*FISWEK
Trigger: TTTTTCCCATGAGATGAAGCACATGTGACGAATACG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGTCCATCTTGATACCTaGAATTTATTGCTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIVHLDT*NLLLAV
Trigger: GACAGCAAGCAATAAATTCCAGGTATCAAGATGGAC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCACAGTATCACTTTTCTaGAGGTCTTCCTCACAAAGT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFITVSLF*RSSSQS
Trigger: ACTTTGTGAGGAAGACCTCCAGAAAAGTGATACTGT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTTGACTCCACTAAATTaGCAACAGCAGCTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFILTPLN*QQQLSS
Trigger: ACTTGAAAGCTGCTGTTGCCAATTTAGTGGAGTCAA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTTCTTCAGAAGTCCGTaGTTCTTCCATATCAAAGGA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIFFRSP*FFHIKG
Trigger: TCCTTTGATATGGAAGAACCACGGACTTCTGAAGAA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTTGATGTCATGCTGTTaGTTATTGAGCCTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFILMSCC*LLSLVL
Trigger: AAGAACCAGGCTCAATAACCAACAGCATGACATCAA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGGATTAATTCTTCAGTaGCTTGCTCTCCTCCATTTA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIGLILQ*LALLHL
Trigger: TAAATGGAGGAGAGCAAGCCACTGAAGAATTAATCC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCATTGGGATCATCACTaGATGTTTTATATGGCTGCT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIHWDHH*MFYMAA
Trigger: AGCAGCCATATAAAACATCCAGTGATGATCCCAATG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTTGCTATTCTTTCCTTaGCACAGGTTTCATTGCGAA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFILLFFP*HRFHCE
Trigger: TTCGCAATGAAACCTGTGCCAAGGAAAGAATAGCAA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCTGCCAGGCAATGGTTaGTTTTTAATAGCATCATCA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFILPGNG*FLIASS
Trigger: TGATGATGCTATTAAAAACCAACCATTGCCTGGCAG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCAAGGAGGTCTCAACTTaGCAAATATCTAAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIKEVST*QISKRQ
Trigger: TTGCCTCTTAGATATTTGCCAAGTTGAGACCTCCTT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGAATGTGTAAACATGTaGTACTCAGACTTGTTTTCC +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIECVNM*YSDLFS
Trigger: GGAAAACAAGTCTGAGTATCACATGTTTACACATTC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTTTAAGGGGACTATCTaGATCTTGCACTATCATTTC +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIFKGTI*ILHYHF
Trigger: GAAATGATAGTGCAAGATTCAGATAGTCCCCTTAAA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCATGGGGATCATTCCCTaGAAAACTATTATTGCTACA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIMGIIP*KTIIAT
Trigger: TGTAGCAATAATAGTTTTTCAGGGAATGATCCCCAT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGACATCCTTAGCAAATaGTTTTCTTTCAGAAGCCAT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIDILSK*FSFRSH
Trigger: ATGGCTTCTGAAAGAAAATCATTTGCTAAGGATGTC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCAAATTACCAAAATGTaGATATGGTACCTCACTGCT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIQITKM*IWYLTA
Trigger: AGCAGTGAGGTACCATATTCACATTTTGGTAATTTG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTATTGTTCTCTTCCCTaGACACATTTTTGTCTGTCT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIYCSLP*THFCLS
Trigger: AGACAGACAAAAATGTGTTCAGGGAAGAGAACAATA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR TCA 90 bp ATTTCTAAGGAATGGATTAGTTCTTGGTCATGGGTTAGTAAAAGGGAAACCATTTTTTCAGACTGTGGTTaGCTTCTGGTAACTGAAACC +
Preference number: 4 (lower is better)
Translates to: ISKEWISSWSWVSKRETIFSDCG*LLVTET
Trigger: GGTTTCAGTTACCAGAAGTCAACCACAGTCTGAAAA...AATGGTTTCCCTTTTACTAACCCATGACCAAGAACTAATCCATTCCTTAGAAAT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCAAGAATTCCTTTGGTTaGAAGCTGTCCATCTTGATA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIKNSFG*KLSILI
Trigger: TATCAAGATGGACAGCTTGCAACCAAAGGAATTCTT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTGCTTGAGATTGCGGTaGATAAAAATCTTTGGGTTT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFICLRLR*IKIFGF
Trigger: AAACCCAAAGATTTTTATGCACCGCAATCTCAAGCA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCAATATGGTACCTCACTaGTGTTATTATCAAGTAGGG +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFINMVPH*CYYQVG
Trigger: CCCTACTTGATAATAACAGCAGTGAGGTACCATATT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCTCTGTATGATGATTTaGTATTCTTTCCTTGGCACA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFILCMMI*YSFLGT
Trigger: TGTGCCAAGGAAAGAATAGCAAATCATCATACAGAG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCATGAATCATATTACTaGCAGGCAATGGTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIHESYY*QAMVGF
Trigger: AAAACCAACCATTGCCTGGCAGTAATATGATTCATG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCAATATCAGATTCTTTaGGATATGCAAATCCTCGGT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIQYQIL*DMQILG
Trigger: ACCGAGGATTTGCATATCGCAAAGAATCTGATATTG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR GCA 90 bp ATTTCTAAGGAATGGATTAGTTCTTGGTCATGGGTTAGTAAAAGGGAAACCATTTTGCTTTTCATATGTTaGATGGTCACCCTCTGCAAG +
Preference number: 4 (lower is better)
Translates to: ISKEWISSWSWVSKRETILLFIC*MVTLCK
Trigger: CTTGCAGAGGGTGACCATGCAACATATGAAAAGCAA...AATGGTTTCCCTTTTACTAACCCATGACCAAGAACTAATCCATTCCTTAGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCACTTTCTGTTCTTCCTaGAAAACTCATCTCACTCTT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFITFCSS*KTHLTL
Trigger: AAGAGTGAGATGAGTTTTCCAGGAAGAACAGAAAGT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTTATATTCTTTCTCTTaGGTAAGTTCGCCACTGTCA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFILYSFS*VSSPLS
Trigger: TGACAGTGGCGAACTTACCCAAGAGAAAGAATATAA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCATTACTGCCAGGCAATaGTTGGTTTTTAATAGCATC +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIITARQ*LVFNSI
Trigger: GATGCTATTAAAAACCAACCATTGCCTGGCAGTAAT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp ATTTCTAAGGAATGGATTAGTTCTTGGTCATGGGTTAGTAAAAGGGAAACCATTCTCATCTGCAAAATGTaGGTGATGATAGCATCTACC +
Preference number: 4 (lower is better)
Translates to: ISKEWISSWSWVSKRETILICKM*VMIAST
Trigger: GGTAGATGCTATCATCACCCACATTTTGCAGATGAG...AATGGTTTCCCTTTTACTAACCCATGACCAAGAACTAATCCATTCCTTAGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTTGAAGACATATGTGTaGTTATCTTTCTGCTTTCTG +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFILKTYV*LSFCFL
Trigger: CAGAAAGCAGAAAGATAAGCACACATATGTCTTCAA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCATACTAAGGTCACACTaGCAATCACAGATTTCTTTT +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIILRSH*QSQISF
Trigger: AAAAGAAATCTGTGATTGGCAGTGTGACCTTAGTAT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGGACTATCTGAATCTTaGACTATCATTTCCTTTGTA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIGLSES*TIISFV
Trigger: TACAAAGGAAATGATAGTGCAAGATTCAGATAGTCC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR GCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCAGAATCATAAAGACTTaGTTTCCTGGAACACTGAAA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIRIIKT*FPGTLK
Trigger: TTTCAGTGTTCCAGGAAAGCAAGTCTTTATGATTCT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTTTCCAGAATTTGTATaGGGATCATTCCCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIFPEFV*GSFPEK
Trigger: TTTTTCAGGGAATGATCCCCATACAAATTCTGGAAA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CCA 90 bp ATTTCTAAGGAATGGATTAGTTCTTGGTCATGGGTTAGTAAAAGGGAAACCATTATTAGTTCTTGGTCATaGGTTAGTAAAAGGGAAACC +
Preference number: 4 (lower is better)
Translates to: ISKEWISSWSWVSKRETIISSWS*VSKRET
Trigger: GGTTTCCCTTTTACTAACCCATGACCAAGAACTAAT...AATGGTTTCCCTTTTACTAACCCATGACCAAGAACTAATCCATTCCTTAGAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
3UTR CAA 72 bp GAAGAAAATATCAAGCATATACTAGTACAGGTACTATaGCAGACGACAAAAATCATGAAGGTGGTATGCAAG +
Preference number: 4 (lower is better)
Translates to: EENIKHILVQVL*QTTKIMKVVCK
Trigger: CTTGCATACCACCTTCATGATTTTTGTCGTCTGCAATAGTACCTGTACTAGTATATGCTTGATATTTTCTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR GCA 90 bp ATTTCTAAGGAATGGATTAGTTCTTGGTCATGGGTTAGTAAAAGGGAAACCATTAGTTACTACTCTTTCTaGTTTCTGACTTTGCATTTC +
Preference number: 4 (lower is better)
Translates to: ISKEWISSWSWVSKRETISYYSF*FLTLHF
Trigger: GAAATGCAAAGTCAGAAAGCAGAAAGAGTAGTAACT...AATGGTTTCCCTTTTACTAACCCATGACCAAGAACTAATCCATTCCTTAGAAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS GCA 90 bp GCGGGCGCCGACGGGCTTTGTCCAGGTCTACAGGCTGCACCTTCCTaGCGTGGGAACATAGGTAGGACTCGCCGTCCTCCAGCTCCTCCA +
Preference number: 5 (lower is better)
Translates to: AGADGLCPGLQAAPS*RGNIGRTRRPPAPP
Trigger: TGGAGGAGCTGGAGGACGGCGAGTCCTACCTATGTTCCCACGGCAGGAAGGTGCAGCCTGTAGACCTGGACAAAGCCCGTCGGCGCCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220676.2
ENST00000636932.1
ENST00000637698.1
CDS GCA 90 bp GGGCTTTCCCATAGGGCCGGGCCAGGTTCTAGGCAGAGAAGCGTCTaGATTCCGAGGCGCAGTCTGGGCTGGAGCCTGTCACCACCCTTC +
Preference number: 5 (lower is better)
Translates to: GLSHRAGPGSRQRSV*IPRRSLGWSLSPPF
Trigger: GAAGGGTGGTGACAGGCTCCAGCCCAGACTGCGCCTCGGAATGCAGACGCTTCTCTGCCTAGAACCTGGCCCGGCCCTATGGGAAAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522001.2
CDS CCA 90 bp CGCTGCATGACCTCTGTCAGGTGCTGTAGAAATGCCTCGAAGCTCTaGGTGACCCTCCTGCTCAGAAGAACCGCACGCCTCGTCTTCGGG +
Preference number: 5 (lower is better)
Translates to: RCMTSVRCCRNASKL*VTLLLRRTARLVFG
Trigger: CCCGAAGACGAGGCGTGCGGTTCTTCTGAGCAGGAGGGTCACCCAGAGCTTCGAGGCATTTCTACAGCACCTGACAGAGGTCATGCAGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220676.2
ENST00000636932.1
ENST00000637698.1
CDS-3UTR CAA 90 bp ACATCCCGGCTCTCCTGCTTGTTCCACTCTCTAAGCTTGGGCAGGTCACTTGGCCCTGACCCCGCCGAATaGGGGGTCTCCGCTCTTGTA +
Preference number: 5 (lower is better)
Translates to: TSRLSCLFHSLSLGRSLGPDPAE*GVSALV
Trigger: TACAAGAGCGGAGACCCCCAATTCGGCGGGGTCAGG...GCCAAGTGACCTGCCCAAGCTTAGAGAGTGGAACAAGCAGGAGAGCCGGGATGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CAA 90 bp CTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGGGTTAAAGGAGCGAGGGTaGACCACCACCCTGACCCCG +
Preference number: 5 (lower is better)
Translates to: LSPARSSNCKWTHRTCTGLKERG*TTTLTP
Trigger: CGGGGTCAGGGTGGTGGTCAACCCTCGCTCCTTTAA...CCCAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CAA 90 bp CCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAGTGCAGATCTTGGTCAGCTGTaGGCGGAGGCTGTCAGTGCA +
Preference number: 5 (lower is better)
Translates to: PQIPGADLGQLLAEAVSADLGQL*AEAVSA
Trigger: TGCACTGACAGCCTCCGCCAACAGCTGACCAAGATC...TGCACTGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS GCA 90 bp GGAACCCTCCTTCCGTCCGTAGCGTACAGCTTGACCACAGGGCGCTaGATGACCTCTGTCAGGTGCTGTAGAAATGCCTCGAAGCTCTGG +
Preference number: 5 (lower is better)
Translates to: GTLLPSVAYSLTTGR*MTSVRCCRNASKLW
Trigger: CCAGAGCTTCGAGGCATTTCTACAGCACCTGACAGAGGTCATGCAGCGCCCTGTGGTCAAGCTGTACGCTACGGACGGAAGGAGGGTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220676.2
ENST00000636932.1
ENST00000637698.1
CDS-3UTR CAA 90 bp ACATCCCGGCTCTCCTGCTTGTTCCACTCTCTAAGCTTGGGCAGGTCACTTGGCTCCGTAGCGTACAGCTaGACCACAGGGCGCTGCATG +
Preference number: 5 (lower is better)
Translates to: TSRLSCLFHSLSLGRSLGSVAYS*TTGRCM
Trigger: CATGCAGCGCCCTGTGGTCAAGCTGTACGCTACGGA...GCCAAGTGACCTGCCCAAGCTTAGAGAGTGGAACAAGCAGGAGAGCCGGGATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CAA 90 bp CCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAGTGCAGCTTGGGCAGGTCACTaGGCTTTTCCATGTGTCGGT +
Preference number: 5 (lower is better)
Translates to: PQIPGADLGQLLAEAVSAAWAGH*AFPCVG
Trigger: ACCGACACATGGAAAAGCCAAGTGACCTGCCCAAGC...TGCACTGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS GCA 90 bp GTAGCGTACAGCTTGACCACAGGGCGCTGCATGACCTCTGTCAGGTaGTGTAGAAATGCCTCGAAGCTCTGGGTGACCCTCCTGCTCAGA +
Preference number: 5 (lower is better)
Translates to: VAYSLTTGRCMTSVR*CRNASKLWVTLLLR
Trigger: TCTGAGCAGGAGGGTCACCCAGAGCTTCGAGGCATTTCTACAGCACCTGACAGAGGTCATGCAGCGCCCTGTGGTCAAGCTGTACGCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220676.2
ENST00000636932.1
ENST00000637698.1
CDS GCA 90 bp CCCAAGTGGGCCCTTTCAGGAGATGGTAGACCCAGTCTCTCCTACTaGACTGGGACTACTTTCTGCGAGCAATTCCCGCTGGGTCTTGCC +
Preference number: 5 (lower is better)
Translates to: PKWALSGDGRPSLSY*TGTTFCEQFPLGLA
Trigger: GGCAAGACCCAGCGGGAATTGCTCGCAGAAAGTAGTCCCAGTGCAGTAGGAGAGACTGGGTCTACCATCTCCTGAAAGGGCCCACTTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637698.1
ENST00000650534.1
CDS-3UTR CAA 90 bp GGGTACCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCATACCAGTACTGTGATTaGTCACTGGCCTCACAGCGC +
Preference number: 5 (lower is better)
Translates to: GYPRYQGLILVSCWRRLSYQYCD*SLASQR
Trigger: GCGCTGTGAGGCCAGTGACAAATCACAGTACTGGTA...TGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGGTACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS TCA 90 bp CCTACACTAAGACTTAGGGCCTGCCTCCACATCCGCATCCATACATaGGAAAGGAGGACTCAGCGGGCCCCAATGCTCCTTCCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: PTLRLRACLHIRIHT*ERRTQRAPMLLPAP
Trigger: TGGAGCTGGAAGGAGCATTGGGGCCCGCTGAGTCCTCCTTTCTCATGTATGGATGCGGATGTGGAGGCAGGCCCTAAGTCTTAGTGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518787.2
ENST00000522001.2
ENST00000602362.2
ENST00000646684.1
CDS GCA 90 bp ACATCCGCATCCATACATGAGAAAGGAGGACTCAGCGGGCCCCAATaGTCCTTCCAGCTCCAGCTTTCTAGCAGCGGGCGTGTGAATGTC +
Preference number: 5 (lower is better)
Translates to: TSASIHEKGGLSGPQ*SFQLQLSSSGRVNV
Trigger: GACATTCACACGCCCGCTGCTAGAAAGCTGGAGCTGGAAGGAGCATTGGGGCCCGCTGAGTCCTCCTTTCTCATGTATGGATGCGGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518787.2
ENST00000522001.2
ENST00000602362.2
ENST00000646684.1
CDS-3UTR CAA 90 bp CCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAGTGCAAATTCCCGCTGGGTCTaGCCATCATCTTGGTACTCA +
Preference number: 5 (lower is better)
Translates to: PQIPGADLGQLLAEAVSANSRWV*PSSWYS
Trigger: TGAGTACCAAGATGATGGCAAGACCCAGCGGGAATT...TGCACTGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CAA 90 bp CTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGGATTTCCCCATCCTCTaGATCTCGTGCCAACCATCG +
Preference number: 5 (lower is better)
Translates to: LCHQLEAQTASGPTGRALDFPIL*ISCQPS
Trigger: CGATGGTTGGCACGAGATCAAGAGGATGGGGAAATC...CAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CAA 90 bp ACATCCCGGCTCTCCTGCTTGTTCCACTCTCTAAGCTTGGGCAGGTCACTTGGCTGCTCTGAGCTGTCCTaGCGAAGACTTATTGGCCCA +
Preference number: 5 (lower is better)
Translates to: TSRLSCLFHSLSLGRSLGCSELS*RRLIGP
Trigger: TGGGCCAATAAGTCTTCGCAAGGACAGCTCAGAGCA...GCCAAGTGACCTGCCCAAGCTTAGAGAGTGGAACAAGCAGGAGAGCCGGGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS TCA 90 bp ATGGAGGCTCCAGTCCAGGCCCCACCTAAAGCCATTGGATGCTATTaGCATAGAGATGGCCCTAAATGTGCTGCAGGCCATGTGGGTCTC +
Preference number: 5 (lower is better)
Translates to: MEAPVQAPPKAIGCY*HRDGPKCAAGHVGL
Trigger: GAGACCCACATGGCCTGCAGCACATTTAGGGCCATCTCTATGTCAATAGCATCCAATGGCTTTAGGTGGGGCCTGGACTGGAGCCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646684.1
CDS-3UTR CAA 90 bp CTCAGAAACAATGAGTGGGTCCAACACAAACTGACCCTCCCCAGGTGTTTGCTCTGCAGCTGTATCTCCTaGCAGTGCCAGGAAGGGGAG +
Preference number: 5 (lower is better)
Translates to: LRNNEWVQHKLTLPRCLLCSCIS*QCQEGE
Trigger: CTCCCCTTCCTGGCACTGCAAGGAGATACAGCTGCA...GAGCAAACACCTGGGGAGGGTCAGTTTGTGTTGGACCCACTCATTGTTTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CAA 90 bp CCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAGTGCATCGTGCCAACCATCGTaGAACAGGTACATAAAACTG +
Preference number: 5 (lower is better)
Translates to: PQIPGADLGQLLAEAVSASCQPS*NRYIKL
Trigger: CAGTTTTATGTACCTGTTCAACGATGGTTGGCACGA...TGCACTGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CAA 90 bp ACTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTCAAGTTCCACTCGGGTaGCTCACTGGTTCCATCATG +
Preference number: 5 (lower is better)
Translates to: TLSPARSSNCKWTHRTCTQVPLG*LTGSIM
Trigger: CATGATGGAACCAGTGAGCAACCCGAGTGGAACTTG...AGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS GCA 90 bp ATCAAAAACAACTGTGTGACCAGGAACCAGTGCCGACTCAAGAAGTaGACAGCGGTTAGGCTGATAAAGCACCCGCAGCTCAGTGGTGGC +
Preference number: 5 (lower is better)
Translates to: IKNNCVTRNQCRLKK*TAVRLIKHPQLSGG
Trigger: GCCACCACTGAGCTGCGGGTGCTTTATCAGCCTAACCGCTGTGCACTTCTTGAGTCGGCACTGGTTCCTGGTCACACAGTTGTTTTTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS GCA 90 bp TATGCACTTTCCAGTAGGATTTTTCAGACTGGCTTCCCACTCCAGTaGAGCTTCCATCAGGCTGGAGACACAGGGCCTGACACAGGCTTG +
Preference number: 5 (lower is better)
Translates to: YALSSRIFQTGFPLQ*SFHQAGDTGPDTGL
Trigger: CAAGCCTGTGTCAGGCCCTGTGTCTCCAGCCTGATGGAAGCTGCACTGGAGTGGGAAGCCAGTCTGAAAAATCCTACTGGAAAGTGCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS GCA 90 bp GGAGATGGTAGACCCAGTCTCTCCTACTGCACTGGGACTACTTTCTaGGAGCAATTCCCGCTGGGTCTTGCCATCATCTTGGTACTCATC +
Preference number: 5 (lower is better)
Translates to: GDGRPSLSYCTGTTF*EQFPLGLAIILVLI
Trigger: GATGAGTACCAAGATGATGGCAAGACCCAGCGGGAATTGCTCGCAGAAAGTAGTCCCAGTGCAGTAGGAGAGACTGGGTCTACCATCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637698.1
ENST00000650534.1
CDS-3UTR CAA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAATACCAGGGGCTGATCTaGGTCAGCTGTTGGCGGAGG +
Preference number: 5 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQYQGLI*VSCWRR
Trigger: CCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTA...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CAA 90 bp CCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAGTGCACACACAGTAACCCAATaGGTTGGGTTCTTTCTACAT +
Preference number: 5 (lower is better)
Translates to: PQIPGADLGQLLAEAVSAHTVTQ*VGFFLH
Trigger: ATGTAGAAAGAACCCAACCAATTGGGTTACTGTGTG...TGCACTGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CAA 90 bp ACTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTTTCCACTCTCTAAGCTaGGGCAGGTCACTTGGCTTT +
Preference number: 5 (lower is better)
Translates to: TLSPARSSNCKWTHRTCTFHSLS*GRSLGF
Trigger: AAAGCCAAGTGACCTGCCCAAGCTTAGAGAGTGGAA...AGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS TCA 90 bp GGTGCCGGGCTCTCTGACTATGACTTGTTCACAGTACCAGTACTGTaGTTTGTCACTGGCCTCACAGCGCAACAGCACCTTCTGCAGTTT +
Preference number: 5 (lower is better)
Translates to: GAGLSDYDLFTVPVL*FVTGLTAQQHLLQF
Trigger: AAACTGCAGAAGGTGCTGTTGCGCTGTGAGGCCAGTGACAAATCACAGTACTGGTACTGTGAACAAGTCATAGTCAGAGAGCCCGGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS GCA 90 bp AAGGCCCAGTGTGGAGATAAAACCAGAGTTGGAAGTCCCTGGGGCTaGAGACAGAGGAGGATTGCAGCAGTTCAACTCTACAACAAAGGC +
Preference number: 5 (lower is better)
Translates to: KAQCGDKTRVGSPWG*RQRRIAAVQLYNKG
Trigger: GCCTTTGTTGTAGAGTTGAACTGCTGCAATCCTCCTCTGTCTGCAGCCCCAGGGACTTCCAACTCTGGTTTTATCTCCACACTGGGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646684.1
CDS CCA 90 bp TTGCTGAAGGCCCAGTGTGGAGATAAAACCAGAGTTGGAAGTCCCTaGGGCTGCAGACAGAGGAGGATTGCAGCAGTTCAACTCTACAAC +
Preference number: 5 (lower is better)
Translates to: LLKAQCGDKTRVGSP*GCRQRRIAAVQLYN
Trigger: GTTGTAGAGTTGAACTGCTGCAATCCTCCTCTGTCTGCAGCCCCAGGGACTTCCAACTCTGGTTTTATCTCCACACTGGGCCTTCAGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646684.1
CDS-3UTR CAA 90 bp CCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAGTGCACATTCACTTCATATATaGTCACTGGAAGGACAGGTT +
Preference number: 5 (lower is better)
Translates to: PQIPGADLGQLLAEAVSAHSLHI*SLEGQV
Trigger: AACCTGTCCTTCCAGTGACAATATATGAAGTGAATG...TGCACTGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CAA 90 bp CTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGGGTCGCATCGGCCATCCTaGATTCTTAGATACATTTGT +
Preference number: 5 (lower is better)
Translates to: LSPARSSNCKWTHRTCTGSHRPS*ILRYIC
Trigger: ACAAATGTATCTAAGAATCAAGGATGGCCGATGCGA...CCCAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CAA 90 bp CTCAGAAACAATGAGTGGGTCCAACACAAACTGACCCTCCCCAGGTGTTTGCTCCTTCTTGGCTGGGTGTaGCAGACATTCCCATTGGGT +
Preference number: 5 (lower is better)
Translates to: LRNNEWVQHKLTLPRCLLLLGWV*QTFPLG
Trigger: ACCCAATGGGAATGTCTGCAACACCCAGCCAAGAAG...GAGCAAACACCTGGGGAGGGTCAGTTTGTGTTGGACCCACTCATTGTTTCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CAA 90 bp CTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGGAGAGTGACATTGGCTaGAGTTCCTGTATTTCCTGT +
Preference number: 5 (lower is better)
Translates to: LCHQLEAQTASGPTGRALESDIG*SSCISC
Trigger: ACAGGAAATACAGGAACTCAAGCCAATGTCACTCTC...CAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CAA 90 bp ACATCCCGGCTCTCCTGCTTGTTCCACTCTCTAAGCTTGGGCAGGTCACTTGGCGAGACAGCCATACGTTaGCTGCAAAATCTAGGATCT +
Preference number: 5 (lower is better)
Translates to: TSRLSCLFHSLSLGRSLGETAIR*LQNLGS
Trigger: AGATCCTAGATTTTGCAGCAAACGTATGGCTGTCTC...GCCAAGTGACCTGCCCAAGCTTAGAGAGTGGAACAAGCAGGAGAGCCGGGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CAA 90 bp ACATCCCGGCTCTCCTGCTTGTTCCACTCTCTAAGCTTGGGCAGGTCACTTGGCGAAAGGAAGCCATCTTaGACAGGTAAAGATGGACTC +
Preference number: 5 (lower is better)
Translates to: TSRLSCLFHSLSLGRSLGERKPS*TGKDGL
Trigger: GAGTCCATCTTTACCTGTCAAAGATGGCTTCCTTTC...GCCAAGTGACCTGCCCAAGCTTAGAGAGTGGAACAAGCAGGAGAGCCGGGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CAA 90 bp CCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAGTGCACTGGTACCGATGAGGTaGATAAATACATTAGACTCT +
Preference number: 5 (lower is better)
Translates to: PQIPGADLGQLLAEAVSALVPMR*INTLDS
Trigger: AGAGTCTAATGTATTTATCAACCTCATCGGTACCAG...TGCACTGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CAA 90 bp GGGTACCCCAGATACCAGGGGCTGATCTTGGTCAGCTGTTGGCGGAGGCTGTCAACTGAAGCCGTATTCTaGATGTATTTTCATCCTCAG +
Preference number: 5 (lower is better)
Translates to: GYPRYQGLILVSCWRRLSTEAVF*MYFHPQ
Trigger: CTGAGGATGAAAATACATCAAGAATACGGCTTCAGT...TGACAGCCTCCGCCAACAGCTGACCAAGATCAGCCCCTGGTATCTGGGGTACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS TCA 90 bp GATGGCCCTAAATGTGCTGCAGGCCATGTGGGTCTCCTGCTTGGATaGCAAGCTCTAGGCCTGTCAGACCTAGAGCAAATAAGATCTGTT +
Preference number: 5 (lower is better)
Translates to: DGPKCAAGHVGLLLG*QALGLSDLEQIRSV
Trigger: AACAGATCTTATTTGCTCTAGGTCTGACAGGCCTAGAGCTTGTCATCCAAGCAGGAGACCCACATGGCCTGCAGCACATTTAGGGCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646684.1
CDS GCA 90 bp GTATTTTTGGATGTCATAATTTCCTGGTTTAAATGGCTCCCTTCCTaGCGCCACCACAGCTCCAGAGCTCAGGATCACTGCCTGGAGGCT +
Preference number: 5 (lower is better)
Translates to: VFLDVIISWFKWLPS*RHHSSRAQDHCLEA
Trigger: AGCCTCCAGGCAGTGATCCTGAGCTCTGGAGCTGTGGTGGCGGCAGGAAGGGAGCCATTTAAACCAGGAAATTATGACATCCAAAAATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220676.2
ENST00000636932.1
ENST00000637698.1
CDS GCA 90 bp ACATGGAGAGCAAGTCACTTCCAAAACACAGACTTCAGGGGCACATaGCTCACTGGCAGAGCAACCTCCATCCAAAGAGGAGATTCCTTG +
Preference number: 5 (lower is better)
Translates to: TWRASHFQNTDFRGT*LTGRATSIQRGDSL
Trigger: CAAGGAATCTCCTCTTTGGATGGAGGTTGCTCTGCCAGTGAGGCATGTGCCCCTGAAGTCTGTGTTTTGGAAGTGACTTGCTCTCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS CCA 90 bp TCGCTTGGCCACAACAGGATGAGTGAGGCTCAAATGGCGAGGGGGTaGAACTTGACCTTCAGAAGACGTAGGATGAATGATGGAAAAACC +
Preference number: 5 (lower is better)
Translates to: SLGHNRMSEAQMARG*NLTFRRRRMNDGKT
Trigger: GGTTTTTCCATCATTCATCCTACGTCTTCTGAAGGTCAAGTTCCACCCCCTCGCCATTTGAGCCTCACTCATCCTGTTGTGGCCAAGCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000220676.2
ENST00000636932.1
ENST00000637698.1
CDS CCA 90 bp GTCTCTCCTACTGCACTGGGACTACTTTCTGCGAGCAATTCCCGCTaGGTCTTGCCATCATCTTGGTACTCATCTAGCCATCTGTTGCAT +
Preference number: 5 (lower is better)
Translates to: VSPTALGLLSASNSR*VLPSSWYSSSHLLH
Trigger: ATGCAACAGATGGCTAGATGAGTACCAAGATGATGGCAAGACCCAGCGGGAATTGCTCGCAGAAAGTAGTCCCAGTGCAGTAGGAGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637698.1
ENST00000650534.1
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGGGCGCCGACGGGCTTaGTCCAGGTCTACAGGCTGC +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIGRRRA*SRSTGC
Trigger: GCAGCCTGTAGACCTGGACAAAGCCCGTCGGCGCCC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp ACTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTACTTGCATGTTAGATTaGTACAGCTGTCTGAGGCCA +
Preference number: 5 (lower is better)
Translates to: TLSPARSSNCKWTHRTCTTCMLD*YSCLRP
Trigger: TGGCCTCAGACAGCTGTACAAATCTAACATGCAAGT...AGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS TCA 90 bp CTCCCAAACCACACACTGGCAAAGAACAGAACTAGCCTGGGGTCATaGGTGTTGGTATGCCTCTCATTCTGTGAAGACCTGCACACAAGT +
Preference number: 5 (lower is better)
Translates to: LPNHTLAKNRTSLGS*VLVCLSFCEDLHTS
Trigger: ACTTGTGTGCAGGTCTTCACAGAATGAGAGGCATACCAACACTCATGACCCCAGGCTAGTTCTGTTCTTTGCCAGTGTGTGGTTTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522001.2
ENST00000602362.2
ENST00000646684.1
CDS TCA 90 bp TATCTCCCCATTCTGGATCCTGGAAGTCTGAAATCAAGACGTCAATaGGGCCATACTCCCTCTGAGACTCTGGGTGGAATCCTTCCTTGC +
Preference number: 5 (lower is better)
Translates to: YLPILDPGSLKSRRQ*GHTPSETLGGILPC
Trigger: GCAAGGAAGGATTCCACCCAGAGTCTCAGAGGGAGTATGGCCTCATTGACGTCTTGATTTCAGACTTCCAGGATCCAGAATGGGGAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650534.1
CDS TCA 90 bp CCTGAATCTGTCTCCTCTATCTCCCCATTCTGGATCCTGGAAGTCTaGAATCAAGACGTCAATGAGGCCATACTCCCTCTGAGACTCTGG +
Preference number: 5 (lower is better)
Translates to: PESVSSISPFWILEV*NQDVNEAILPLRLW
Trigger: CCAGAGTCTCAGAGGGAGTATGGCCTCATTGACGTCTTGATTTCAGACTTCCAGGATCCAGAATGGGGAGATAGAGGAGACAGATTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650534.1
CDS CCA 90 bp TCACAGAACTCCCAAACCACACACTGGCAAAGAACAGAACTAGCCTaGGGTCATGAGTGTTGGTATGCCTCTCATTCTGTGAAGACCTGC +
Preference number: 5 (lower is better)
Translates to: SQNSQTTHWQRTELA*GHECWYASHSVKTC
Trigger: GCAGGTCTTCACAGAATGAGAGGCATACCAACACTCATGACCCCAGGCTAGTTCTGTTCTTTGCCAGTGTGTGGTTTGGGAGTTCTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522001.2
ENST00000602362.2
ENST00000646684.1
CDS-3UTR CAA 90 bp CTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGTATAAATCATTGGTTTaGCCTGCCCATCTGACTGAA +
Preference number: 5 (lower is better)
Translates to: LCHQLEAQTASGPTGRALYKSLV*PAHLTE
Trigger: TTCAGTCAGATGGGCAGGCAAAACCAATGATTTATA...CAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CAA 90 bp CTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGGGATTCTTTCCAGTGTaGTCATGTCCAATACGTATT +
Preference number: 5 (lower is better)
Translates to: LCHQLEAQTASGPTGRALGFFPV*SCPIRI
Trigger: AATACGTATTGGACATGACAACACTGGAAAGAATCC...CAGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CAA 90 bp CACACACACACACATATACACACACACCGTAATGGTGAAATGTGCCGACTACTAACCCTCCCCAGGTGTTaGCTCCAGCCCAAGCAAAAG +
Preference number: 5 (lower is better)
Translates to: HTHTHIHTHRNGEMCRLLTLPRC*LQPKQK
Trigger: CTTTTGCTTGGGCTGGAGCAAACACCTGGGGAGGGT...TAGTAGTCGGCACATTTCACCATTACGGTGTGTGTGTATATGTGTGTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CAA 90 bp CACACACACACACATATACACACACACCGTAATGGTGAAATGTGCCGACTACTAGGTGGTATGCAAGATTaGCCTCCTTGGCCCCTCTGC +
Preference number: 5 (lower is better)
Translates to: HTHTHIHTHRNGEMCRLLGGMQD*PPWPLC
Trigger: GCAGAGGGGCCAAGGAGGCAAATCTTGCATACCACC...TAGTAGTCGGCACATTTCACCATTACGGTGTGTGTGTATATGTGTGTGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS TCA 90 bp AAAGGAACACTGTTGCCGTGGTGCCGGCATTTTCAAGATCCCCAGTaGCAATGGTCACCTTCCAGTCTCCATCATTTGCTTCCTCTTGTA +
Preference number: 5 (lower is better)
Translates to: KGTLLPWCRHFQDPQ*QWSPSSLHHLLPLV
Trigger: TACAAGAGGAAGCAAATGATGGAGACTGGAAGGTGACCATTGTCACTGGGGATCTTGAAAATGCCGGCACCACGGCAACAGTGTTCCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS GCA 90 bp TGCTCCTTCCAGCTCCAGCTTTCTAGCAGCGGGCGTGTGAATGTCTaGACAGCAGTCAGAACAACTCGTACCTTAACTGAAATGAAAACA +
Preference number: 5 (lower is better)
Translates to: CSFQLQLSSSGRVNV*TAVRTTRTLTEMKT
Trigger: TGTTTTCATTTCAGTTAAGGTACGAGTTGTTCTGACTGCTGTGCAGACATTCACACGCCCGCTGCTAGAAAGCTGGAGCTGGAAGGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518787.2
ENST00000522001.2
ENST00000602362.2
ENST00000646684.1
CDS GCA 90 bp CTGCCTACGAGTGAACCCTCCTCTAATTGTGCTGGACCTAGGAACTaGAATGTTTGCCGTGTCACCTGGATTATTAGTAGCGACTGCAAA +
Preference number: 5 (lower is better)
Translates to: LPTSEPSSNCAGPRN*NVCRVTWIISSDCK
Trigger: TTTGCAGTCGCTACTAATAATCCAGGTGACACGGCAAACATTGCAGTTCCTAGGTCCAGCACAATTAGAGGAGGGTTCACTCGTAGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522001.2
ENST00000602362.2
ENST00000646684.1
CDS GCA 90 bp TATTTTGCCATGACGATCAAAAACAACTGTGTGACCAGGAACCAGTaGCGACTCAAGAAGTGCACAGCGGTTAGGCTGATAAAGCACCCG +
Preference number: 5 (lower is better)
Translates to: YFAMTIKNNCVTRNQ*RLKKCTAVRLIKHP
Trigger: CGGGTGCTTTATCAGCCTAACCGCTGTGCACTTCTTGAGTCGGCACTGGTTCCTGGTCACACAGTTGTTTTTGATCGTCATGGCAAAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS GCA 90 bp CTACTGCACTGGGACTACTTTCTGCGAGCAATTCCCGCTGGGTCTTaGCATCATCTTGGTACTCATCTAGCCATCTGTTGCATAGAAACA +
Preference number: 5 (lower is better)
Translates to: LLHWDYFLRAIPAGS*HHLGTHLAICCIET
Trigger: TGTTTCTATGCAACAGATGGCTAGATGAGTACCAAGATGATGGCAAGACCCAGCGGGAATTGCTCGCAGAAAGTAGTCCCAGTGCAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637698.1
ENST00000650534.1
CDS CCA 90 bp AGCAGGAAGCAAGTATTTTTGGATGTCATAATTTCCTGGTTTAAATaGCTCCCTTCCTGCCGCCACCACAGCTCCAGAGCTCAGGATCAC +
Preference number: 5 (lower is better)
Translates to: SRKQVFLDVIISWFK*LPSCRHHSSRAQDH
Trigger: GTGATCCTGAGCTCTGGAGCTGTGGTGGCGGCAGGAAGGGAGCCATTTAAACCAGGAAATTATGACATCCAAAAATACTTGCTTCCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220676.2
ENST00000636932.1
ENST00000637698.1
CDS CCA 90 bp AGCAAGTCACTTCCAAAACACAGACTTCAGGGGCACATGCCTCACTaGCAGAGCAACCTCCATCCAAAGAGGAGATTCCTTGTGTTCTTT +
Preference number: 5 (lower is better)
Translates to: SKSLPKHRLQGHMPH*QSNLHPKRRFLVFF
Trigger: AAAGAACACAAGGAATCTCCTCTTTGGATGGAGGTTGCTCTGCCAGTGAGGCATGTGCCCCTGAAGTCTGTGTTTTGGAAGTGACTTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS CCA 90 bp TTAGTAGCGACTGCAAACACTTCACAGAACTCCCAAACCACACACTaGCAAAGAACAGAACTAGCCTGGGGTCATGAGTGTTGGTATGCC +
Preference number: 5 (lower is better)
Translates to: LVATANTSQNSQTTH*QRTELAWGHECWYA
Trigger: GGCATACCAACACTCATGACCCCAGGCTAGTTCTGTTCTTTGCCAGTGTGTGGTTTGGGAGTTCTGTGAAGTGTTTGCAGTCGCTACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522001.2
ENST00000602362.2
ENST00000646684.1
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCCTGACCCCGCCGAATaGGGGGTCTCCGCTCTTGTA +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIPDPAE*GVSALV
Trigger: TACAAGAGCGGAGACCCCCAATTCGGCGGGGTCAGG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp ACTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTTTGAGGAACACCCCCTaGACAAAAATCACAAATTCT +
Preference number: 5 (lower is better)
Translates to: TLSPARSSNCKWTHRTCTLRNTP*TKITNS
Trigger: AGAATTTGTGATTTTTGTCAAGGGGGTGTTCCTCAA...AGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CAA 90 bp ACTCTGTCACCAGCTCGAAGCTCAAACTGCAAGTGGACCCACAGGACGTGCACTGCCAAATTGGATGACTaGTGGATAGAAGCAAACATT +
Preference number: 5 (lower is better)
Translates to: TLSPARSSNCKWTHRTCTAKLDD*WIEANI
Trigger: AATGTTTGCTTCTATCCACAAGTCATCCAATTTGGC...AGTGCACGTCCTGTGGGTCCACTTGCAGTTTGAGCTTCGAGCTGGTGACAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CAA 90 bp CTCAGAAACAATGAGTGGGTCCAACACAAACTGACCCTCCCCAGGTGTTTGCTCCTCTCTGACTATGACTaGTTCACAGTACCAGTACTG +
Preference number: 5 (lower is better)
Translates to: LRNNEWVQHKLTLPRCLLLSDYD*FTVPVL
Trigger: CAGTACTGGTACTGTGAACAAGTCATAGTCAGAGAG...GAGCAAACACCTGGGGAGGGTCAGTTTGTGTTGGACCCACTCATTGTTTCTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CAA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAACATAAAGGAACACTGTaGCCGTGGTGCCGGCATTTT +
Preference number: 5 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQHKGTL*PWCRHF
Trigger: AAAATGCCGGCACCACGGCAACAGTGTTCCTTTATG...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS GCA 90 bp AGGCCTGTCAGACCTAGAGCAAATAAGATCTGTTTCTACGTTGAGTaGTCACAATGTGCTAAGCACTGTGTGTTGTGGCCTTACACAGCC +
Preference number: 5 (lower is better)
Translates to: RPVRPRANKICFYVE*SQCAKHCVLWPYTA
Trigger: GGCTGTGTAAGGCCACAACACACAGTGCTTAGCACATTGTGAGCACTCAACGTAGAAACAGATCTTATTTGCTCTAGGTCTGACAGGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646684.1
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTTAAAGGAGCGAGGGTaGACCACCACCCTGACCCCG +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFILKERG*TTTLTP
Trigger: CGGGGTCAGGGTGGTGGTCAACCCTCGCTCCTTTAA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTCCGTAGCGTACAGCTaGACCACAGGGCGCTGCATG +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFISVAYS*TTGRCM
Trigger: CATGCAGCGCCCTGTGGTCAAGCTGTACGCTACGGA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS GCA 90 bp AGGAACTGCAATGTTTGCCGTGTCACCTGGATTATTAGTAGCGACTaGAAACACTTCACAGAACTCCCAAACCACACACTGGCAAAGAAC +
Preference number: 5 (lower is better)
Translates to: RNCNVCRVTWIISSD*KHFTELPNHTLAKN
Trigger: GTTCTTTGCCAGTGTGTGGTTTGGGAGTTCTGTGAAGTGTTTGCAGTCGCTACTAATAATCCAGGTGACACGGCAAACATTGCAGTTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522001.2
ENST00000602362.2
ENST00000646684.1
CDS GCA 90 bp AGTGAACCCTCCTCTAATTGTGCTGGACCTAGGAACTGCAATGTTTaGCGTGTCACCTGGATTATTAGTAGCGACTGCAAACACTTCACA +
Preference number: 5 (lower is better)
Translates to: SEPSSNCAGPRNCNV*RVTWIISSDCKHFT
Trigger: TGTGAAGTGTTTGCAGTCGCTACTAATAATCCAGGTGACACGGCAAACATTGCAGTTCCTAGGTCCAGCACAATTAGAGGAGGGTTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522001.2
ENST00000602362.2
ENST00000646684.1
CDS GCA 90 bp CAAAGACACCATATTTGTCTGTCTTCTCTCCAATGGCGTCAACTGTaGCATCTGGATGCAAACGGACAAACCCTCCAGTCAGCTTGTTAT +
Preference number: 5 (lower is better)
Translates to: QRHHICLSSLQWRQL*HLDANGQTLQSACY
Trigger: ATAACAAGCTGACTGGAGGGTTTGTCCGTTTGCATCCAGATGGCACAGTTGACGCCATTGGAGAGAAGACAGACAAATATGGTGTCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS CCA 90 bp GTCAATGGTATTGCAGACATTGACAGGAACGTAGGTCTCATCAATTaGGCAAGCTCCCTCATAGGTATGGTTCTCCTTTTGAGCACAAGC +
Preference number: 5 (lower is better)
Translates to: VNGIADIDRNVGLIN*ASSLIGMVLLLSTS
Trigger: GCTTGTGCTCAAAAGGAGAACCATACCTATGAGGGAGCTTGCCCAATTGATGAGACCTACGTTCCTGTCAATGTCTGCAATACCATTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS CCA 90 bp ATGGTACCTCACTGCTGTTATTATCAAGTAGGGTGTCCACTGATGTaGTGTCTGCATTGCCACACATGCCAGGATTTTCAGATGACATCC +
Preference number: 5 (lower is better)
Translates to: MVPHCCYYQVGCPLM*CLHCHTCQDFQMTS
Trigger: GGATGTCATCTGAAAATCCTGGCATGTGTGGCAATGCAGACACCACATCAGTGGACACCCTACTTGATAATAACAGCAGTGAGGTACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAATCCATAGCTCACCCGTaGCCACATTCACTTCATATA +
Preference number: 5 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQSIAHP*PHSLHI
Trigger: TATATGAAGTGAATGTGGCAACGGGTGAGCTATGGA...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CAA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAACCTTGGTATAAATCATaGGTTTTGCCTGCCCATCTG +
Preference number: 5 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQPWYKS*VLPAHL
Trigger: CAGATGGGCAGGCAAAACCAATGATTTATACCAAGG...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CAA 90 bp CTCAGAAACAATGAGTGGGTCCAACACAAACTGACCCTCCCCAGGTGTTTGCTCGTTTTCTCTGCCAAATaGGATGACTTGTGGATAGAA +
Preference number: 5 (lower is better)
Translates to: LRNNEWVQHKLTLPRCLLVFSAK*DDLWIE
Trigger: TTCTATCCACAAGTCATCCAATTTGGCAGAGAAAAC...GAGCAAACACCTGGGGAGGGTCAGTTTGTGTTGGACCCACTCATTGTTTCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CAA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAATCATCTAGCCATCTGTaGCATAGAAACAGCACCTCT +
Preference number: 5 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQSSSHL*HRNSTS
Trigger: AGAGGTGCTGTTTCTATGCAACAGATGGCTAGATGA...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS TCA 90 bp TCTGCCTCGCAGAGAAGATACTGTTATCCCTGGCATACAGTTCTCTaGCAATTTTACAATCATCTTCCCCCTGATCTAGCCATCTGTGAC +
Preference number: 5 (lower is better)
Translates to: SASQRRYCYPWHTVL*QFYNHLPPDLAICD
Trigger: GTCACAGATGGCTAGATCAGGGGGAAGATGATTGTAAAATTGTCAGAGAACTGTATGCCAGGGATAACAGTATCTTCTCTGCGAGGCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000636932.1
CDS TCA 90 bp CCAGTGACTCCTTTATCTCCATACACCCAGAGAGTGACATTGGCTTaGGTTCCTGTATTTCCTGTCAGCACTAACACCTTCCATTCATCT +
Preference number: 5 (lower is better)
Translates to: PVTPLSPYTQRVTLA*VPVFPVSTNTFHSS
Trigger: AGATGAATGGAAGGTGTTAGTGCTGACAGGAAATACAGGAACTCAAGCCAATGTCACTCTCTGGGTGTATGGAGATAAAGGAGTCACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS GCA 90 bp TTGGGCCTGGGGCCAAATTACCAAAATGTGAATATGGTACCTCACTaGTGTTATTATCAAGTAGGGTGTCCACTGATGTGGTGTCTGCAT +
Preference number: 5 (lower is better)
Translates to: LGLGPNYQNVNMVPH*CYYQVGCPLMWCLH
Trigger: ATGCAGACACCACATCAGTGGACACCCTACTTGATAATAACAGCAGTGAGGTACCATATTCACATTTTGGTAATTTGGCCCCAGGCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS GCA 90 bp AAATCTAGGATCTTCTTGCTTTTCATATGTTGCATGGTCACCCTCTaGAAGTTCCACTCGGGTTGCTCACTGGTTCCATCATGTCCTATC +
Preference number: 5 (lower is better)
Translates to: KSRIFLLFICCMVTL*KFHSGCSLVPSCPI
Trigger: GATAGGACATGATGGAACCAGTGAGCAACCCGAGTGGAACTTGCAGAGGGTGACCATGCAACATATGAAAAGCAAGAAGATCCTAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS CCA 90 bp TCTAATTGTGCTGGACCTAGGAACTGCAATGTTTGCCGTGTCACCTaGATTATTAGTAGCGACTGCAAACACTTCACAGAACTCCCAAAC +
Preference number: 5 (lower is better)
Translates to: SNCAGPRNCNVCRVT*IISSDCKHFTELPN
Trigger: GTTTGGGAGTTCTGTGAAGTGTTTGCAGTCGCTACTAATAATCCAGGTGACACGGCAAACATTGCAGTTCCTAGGTCCAGCACAATTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522001.2
ENST00000602362.2
ENST00000646684.1
CDS-3UTR CAA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAACGACACTGCTGCTACTaGAAATTTATCAATCTGTCC +
Preference number: 5 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQRHCCY*KFINLS
Trigger: GGACAGATTGATAAATTTCAAGTAGCAGCAGTGTCG...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS TCA 90 bp ACCTACTCGCAGAGAAGATACTGTTATCCCTGGCATACAGTTCTCTaGCAATTTTACAATCATCTTCCCCCTGATCTAGCCATCTGTGAC +
Preference number: 5 (lower is better)
Translates to: TYSQRRYCYPWHTVL*QFYNHLPPDLAICD
Trigger: GTCACAGATGGCTAGATCAGGGGGAAGATGATTGTAAAATTGTCAGAGAACTGTATGCCAGGGATAACAGTATCTTCTCTGCGAGTAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS GCA 90 bp GGCCTCACAGCGCAACAGCACCTTCTGCAGTTTTCCAAGCGACACTaGTGCTACTTGAAATTTATCAATCTGTCCTCTTTGAAATTTTAC +
Preference number: 5 (lower is better)
Translates to: GLTAQQHLLQFSKRH*CYLKFINLSSLKFY
Trigger: GTAAAATTTCAAAGAGGACAGATTGATAAATTTCAAGTAGCAGCAGTGTCGCTTGGAAAACTGCAGAAGGTGCTGTTGCGCTGTGAGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS CCA 90 bp TATGTTGCATGGTCACCCTCTGCAAGTTCCACTCGGGTTGCTCACTaGTTCCATCATGTCCTATCCTTATCTTATATATGTTTCCAGTGT +
Preference number: 5 (lower is better)
Translates to: YVAWSPSASSTRVAH*FHHVLSLSYICFQC
Trigger: ACACTGGAAACATATATAAGATAAGGATAGGACATGATGGAACCAGTGAGCAACCCGAGTGGAACTTGCAGAGGGTGACCATGCAACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS CCA 90 bp TGTTTCTACGTTGAGTGCTCACAATGTGCTAAGCACTGTGTGTTGTaGCCTTACACAGCCACAGCATTATTCCCAACCTACAGATATAGA +
Preference number: 5 (lower is better)
Translates to: CFYVECSQCAKHCVL*PYTATALFPTYRYR
Trigger: TCTATATCTGTAGGTTGGGAATAATGCTGTGGCTGTGTAAGGCCACAACACACAGTGCTTAGCACATTGTGAGCACTCAACGTAGAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646684.1
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCGTAGGTCTCATCAATaGGGCAAGCTCCCTCATAGG +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIRRSHQ*GKLPHR
Trigger: CCTATGAGGGAGCTTGCCCAATTGATGAGACCTACG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCAGAGTTCATCCATCGTaGGGCCTGGGGCCAAATTAC +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIRVHPS*GLGPNY
Trigger: GTAATTTGGCCCCAGGCCCAACGATGGATGAACTCT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAACAAAGACAGGTGTCTTaGATATCAAAAGCTACATCC +
Preference number: 5 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQQRQVS*ISKATS
Trigger: GGATGTAGCTTTTGATATCAAAGACACCTGTCTTTG...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS TCA 90 bp AACATTCTCATCCTTGGTATAAATCATTGGTTTTGCCTGCCCATCTaGCTGAAGTCCAACAAACAATCCTGGGCTCTTCGTAGATTCCAG +
Preference number: 5 (lower is better)
Translates to: NILILGINHWFCLPI*LKSNKQSWALRRFQ
Trigger: CTGGAATCTACGAAGAGCCCAGGATTGTTTGTTGGACTTCAGTCAGATGGGCAGGCAAAACCAATGATTTATACCAAGGATGAGAATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS CCA 90 bp GATGACTACCCTTCTCCTCTGTATGATGATTTGCTATTCTTTCCTTaGCACAGGTTTCATTGCGAACATCCAGCAAGTCCTCATGAAAAG +
Preference number: 5 (lower is better)
Translates to: DDYPSPLYDDLLFFP*HRFHCEHPASPHEK
Trigger: CTTTTCATGAGGACTTGCTGGATGTTCGCAATGAAACCTGTGCCAAGGAAAGAATAGCAAATCATCATACAGAGGAGAAGGGTAGTCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTGCCAAACTGCCCTCTaGATTACTGCTTCGCTCCAT +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFICQTAL*ITASLH
Trigger: ATGGAGCGAAGCAGTAATCAAGAGGGCAGTTTGGCA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGATGTGGTGTCTGCATaGCCACACATGCCAGGATTT +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIDVVSA*PHMPGF
Trigger: AAATCCTGGCATGTGTGGCAATGCAGACACCACATC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTTGGCACAGGTTTCATaGCGAACATCCAGCAAGTCC +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFILAQVS*RTSSKS
Trigger: GGACTTGCTGGATGTTCGCAATGAAACCTGTGCCAA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp TGTTGGCGGAGGCTGTCAGTGCATCCTCCCAATTTTGGAAGTTCTCAGAAACAAATTCTTTTGAAAGATTaGCATAGCCTGCTGATGATG +
Preference number: 5 (lower is better)
Translates to: CWRRLSVHPPNFGSSQKQILLKD*HSLLMM
Trigger: CATCATCAGCAGGCTATGCAAATCTTTCAAAAGAAT...TTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCACTGACAGCCTCCGCCAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CAA 90 bp ATTTCTAAGGAATGGATTAGTTCTTGGTCATGGGTTAGTAAAAGGGAAACCATTGCAAGATTTGCCTCCTaGGCCCCTCTGCCTGATTTC +
Preference number: 5 (lower is better)
Translates to: ISKEWISSWSWVSKRETIARFAS*APLPDF
Trigger: GAAATCAGGCAGAGGGGCCAAGGAGGCAAATCTTGC...AATGGTTTCCCTTTTACTAACCCATGACCAAGAACTAATCCATTCCTTAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS TCA 90 bp GACAGTCAACATCTCCTGTACCTGTTCCATCGCATCGGCCATCCTTaGTTCTTAGATACATTTGTGCATTTTTCACACTTTCAAACATGC +
Preference number: 5 (lower is better)
Translates to: DSQHLLYLFHRIGHP*FLDTFVHFSHFQTC
Trigger: GCATGTTTGAAAGTGTGAAAAATGCACAAATGTATCTAAGAATCAAGGATGGCCGATGCGATGGAACAGGTACAGGAGATGTTGACTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS GCA 90 bp AGGGGAGGATCCAGAGTTGGTATGACCAATACGAATCTTAAAGAGTaGTCCAATGTCTCCAACTGTTATAGTAAATATGTCTTCATGGCC +
Preference number: 5 (lower is better)
Translates to: RGGSRVGMTNTNLKE*SNVSNCYSKYVFMA
Trigger: GGCCATGAAGACATATTTACTATAACAGTTGGAGACATTGGAGCACTCTTTAAGATTCGTATTGGTCATACCAACTCTGGATCCTCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS GCA 90 bp CTTTTCATATGTTGCATGGTCACCCTCTGCAAGTTCCACTCGGGTTaGTCACTGGTTCCATCATGTCCTATCCTTATCTTATATATGTTT +
Preference number: 5 (lower is better)
Translates to: LFICCMVTLCKFHSG*SLVPSCPILILYMF
Trigger: AAACATATATAAGATAAGGATAGGACATGATGGAACCAGTGAGCAACCCGAGTGGAACTTGCAGAGGGTGACCATGCAACATATGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS GCA 90 bp CTCACAGCGCAACAGCACCTTCTGCAGTTTTCCAAGCGACACTGCTaGTACTTGAAATTTATCAATCTGTCCTCTTTGAAATTTTACTTG +
Preference number: 5 (lower is better)
Translates to: LTAQQHLLQFSKRHC*YLKFINLSSLKFYL
Trigger: CAAGTAAAATTTCAAAGAGGACAGATTGATAAATTTCAAGTAGCAGCAGTGTCGCTTGGAAAACTGCAGAAGGTGCTGTTGCGCTGTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS GCA 90 bp ACCTCTGGTACCGATGAGGTTGATAAATACATTAGACTCTGTTTCTaGACCTGTCATTGTGCCTGTGTATATGCGAATCTCATAAAGCAC +
Preference number: 5 (lower is better)
Translates to: TSGTDEVDKYIRLCF*TCHCACVYANLIKH
Trigger: GTGCTTTATGAGATTCGCATATACACAGGCACAATGACAGGTGCAGAAACAGAGTCTAATGTATTTATCAACCTCATCGGTACCAGAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637698.1
ENST00000650534.1
CDS CCA 90 bp AGATCTATTGGAACCATGTCTTGTTCTTTCTCACTGAGTCCAAAGTaGCTTGTAGTTGACTCCACTAAATTGGCAACAGCAGCTTTCAAG +
Preference number: 5 (lower is better)
Translates to: RSIGTMSCSFSLSPK*LVVDSTKLATAAFK
Trigger: CTTGAAAGCTGCTGTTGCCAATTTAGTGGAGTCAACTACAAGCCACTTTGGACTCAGTGAGAAAGAACAAGACATGGTTCCAATAGATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCAGTTCGCCACTGTCATaGGGATCATCACTGGATGTT +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFISSPLS*GSSLDV
Trigger: AACATCCAGTGATGATCCCAATGACAGTGGCGAACT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp CACACACACACACATATACACACACACCGTAATGGTGAAATGTGCCGACTACTATGCATCCTCCCAATTTaGGAAGTTCTCAGAAACAAT +
Preference number: 5 (lower is better)
Translates to: HTHTHIHTHRNGEMCRLLCILPI*EVLRNN
Trigger: ATTGTTTCTGAGAACTTCCAAAATTGGGAGGATGCA...TAGTAGTCGGCACATTTCACCATTACGGTGTGTGTGTATATGTGTGTGTGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS TCA 90 bp ATGTGTTTTCTTTGGAGTTTAAAAAGTCAATGGTATTGCAGACATTaGCAGGAACGTAGGTCTCATCAATTGGGCAAGCTCCCTCATAGG +
Preference number: 5 (lower is better)
Translates to: MCFLWSLKSQWYCRH*QERRSHQLGKLPHR
Trigger: CCTATGAGGGAGCTTGCCCAATTGATGAGACCTACGTTCCTGTCAATGTCTGCAATACCATTGACTTTTTAAACTCCAAAGAAAACACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS TCA 90 bp AGGGTTAAACAGCTGGTGTTTCCCAGATCCCAAAATAATAGGACCTaGACATTTTGTTTCTCCATAGACATAAAGGAACACTGTTGCCGT +
Preference number: 5 (lower is better)
Translates to: RVKQLVFPRSQNNRT*TFCFSIDIKEHCCR
Trigger: ACGGCAACAGTGTTCCTTTATGTCTATGGAGAAACAAAATGTTCAGGTCCTATTATTTTGGGATCTGGGAAACACCAGCTGTTTAACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS CCA 90 bp TTGTCCCTCACAGCACTAACATCACACTTATCTTGTCTTTCCTCCTaGAATTCCTGCAACATAGATGAACTACTAGATACCTGTTCAGAA +
Preference number: 5 (lower is better)
Translates to: LSLTALTSHLSCLSS*NSCNIDELLDTCSE
Trigger: TTCTGAACAGGTATCTAGTAGTTCATCTATGTTGCAGGAATTCCAGGAGGAAAGACAAGATAAGTGTGATGTTAGTGCTGTGAGGGACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTTCTGCTTTCTGACTTaGCATTTCCCTTGGGGTACA +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIFCFLT*HFPWGT
Trigger: TGTACCCCAAGGGAAATGCAAAGTCAGAAAGCAGAA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTCTGGGACCTTGAGCTaGAAGACATATGTGTGCTTA +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFISGTLS*KTYVCL
Trigger: TAAGCACACATATGTCTTCAAGCTCAAGGTCCCAGA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCATGCTTTGCTTGGTCTaGAGTTCCCTGGATGATATC +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIMLCLV*SSLDDI
Trigger: GATATCATCCAGGGAACTCAAGACCAAGCAAAGCAT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCAAAACGATGCTTTGCTaGGTCTTGAGTTCCCTGGAT +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIKTMLC*VLSSLD
Trigger: ATCCAGGGAACTCAAGACCAAGCAAAGCATCGTTTT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCAGATGCCACTTCTGCTaGAGATTGCGGTGCATAAAA +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIRCHFC*RLRCIK
Trigger: TTTTATGCACCGCAATCTCAAGCAGAAGTGGCATCT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGTTGACTCCACTAAATaGGCAACAGCAGCTTTCAAG +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIVDSTK*ATAAFK
Trigger: CTTGAAAGCTGCTGTTGCCAATTTAGTGGAGTCAAC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGGTATGGTTCTCCTTTaGAGCACAAGCCTTATCAGA +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIGMVLL*STSLIR
Trigger: TCTGATAAGGCTTGTGCTCAAAAGGAGAACCATACC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTCATGCTGTTGGTTATaGAGCCTGGTTCTTCAGAAG +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFISCCWL*SLVLQK
Trigger: CTTCTGAAGAACCAGGCTCAATAACCAACAGCATGA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCTTGATGTCATGCTGTaGGTTATTGAGCCTGGTTCT +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFILDVML*VIEPGS
Trigger: AGAACCAGGCTCAATAACCAACAGCATGACATCAAG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCAGAAGCCATTTGCCTTaGTCAATCAGTACTCCTTCC +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIRSHLP*SISTPS
Trigger: GGAAGGAGTACTGATTGACAAAGGCAAATGGCTTCT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp CACACACACACACATATACACACACACCGTAATGGTGAAATGTGCCGACTACTATTTGTTGTGGGATCCTaGATAACAACATCATCAAGA +
Preference number: 5 (lower is better)
Translates to: HTHTHIHTHRNGEMCRLLFVVGS*ITTSSR
Trigger: TCTTGATGATGTTGTTATCAAGGATCCCACAACAAA...TAGTAGTCGGCACATTTCACCATTACGGTGTGTGTGTATATGTGTGTGTGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS TCA 90 bp ACTGGTAAGAGGTCTTTTGGAGTTTCCTCTTCTATAGGATCTACTTaGATGGCAGCCTCTACACTTTGCCTTTTTCTAGCTAGGTTTATT +
Preference number: 5 (lower is better)
Translates to: TGKRSFGVSSSIGST*MAASTLCLFLARFI
Trigger: AATAAACCTAGCTAGAAAAAGGCAAAGTGTAGAGGCTGCCATTCAAGTAGATCCTATAGAAGAGGAAACTCCAAAAGACCTCTTACCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS TCA 90 bp GAAGCCATTTGCCTTTGTCAATCAGTACTCCTTCCTCTATGTCTGTaGGGATTCTGCTATCATCATTTTGTTTTGTACCAGGTTCTACAA +
Preference number: 5 (lower is better)
Translates to: EAICLCQSVLLPLCL*GFCYHHFVLYQVLQ
Trigger: TTGTAGAACCTGGTACAAAACAAAATGATGATAGCAGAATCCTCACAGACATAGAGGAAGGAGTACTGATTGACAAAGGCAAATGGCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTGCAAGCTGTCCATCTaGATACCTGGAATTTATTGC +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFICKLSI*IPGIYC
Trigger: GCAATAAATTCCAGGTATCAAGATGGACAGCTTGCA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTTCTATAGGATCTACTaGAATGGCAGCCTCTACACT +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIFYRIY*NGSLYT
Trigger: AGTGTAGAGGCTGCCATTCAAGTAGATCCTATAGAA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTATTGGAACCATGTCTaGTTCTTTCTCACTGAGTCC +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIYWNHV*FFLTES
Trigger: GGACTCAGTGAGAAAGAACAAGACATGGTTCCAATA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGTTATATTCTTTCTCTaGGGTAAGTTCGCCACTGTC +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIVIFFL*GKFATV
Trigger: GACAGTGGCGAACTTACCCAAGAGAAAGAATATAAC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTTTGCTATTCTTTCCTaGGCACAGGTTTCATTGCGA +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIFAILS*AQVSLR
Trigger: TCGCAATGAAACCTGTGCCAAGGAAAGAATAGCAAA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCACTGCCAGGCAATGGTaGGTTTTTAATAGCATCATC +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFITARQW*VFNSII
Trigger: GATGATGCTATTAAAAACCAACCATTGCCTGGCAGT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTCTCTTACTACTTGGTaGAGATTTGTTCTTGAGCCC +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFISLTTW*RFVLEP
Trigger: GGGCTCAAGAACAAATCTCAACCAAGTAGTAAGAGA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp ATTTCTAAGGAATGGATTAGTTCTTGGTCATGGGTTAGTAAAAGGGAAACCATTTTCTGCTTTCTGACTTaGCATTTCCCTTGGGGTACA +
Preference number: 5 (lower is better)
Translates to: ISKEWISSWSWVSKRETIFCFLT*HFPWGT
Trigger: TGTACCCCAAGGGAAATGCAAAGTCAGAAAGCAGAA...AATGGTTTCCCTTTTACTAACCCATGACCAAGAACTAATCCATTCCTTAGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCAATAAATCTGGGACCTaGAGCTTGAAGACATATGTG +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFINKSGT*SLKTYV
Trigger: CACATATGTCTTCAAGCTCAAGGTCCCAGATTTATT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTATAAAAACGATGCTTaGCTTGGTCTTGAGTTCCCT +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIYKNDA*LGLEFP
Trigger: AGGGAACTCAAGACCAAGCAAAGCATCGTTTTTATA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCACTTCTGCTTGAGATaGCGGTGCATAAAAATCTTT +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIHFCLR*RCIKIF
Trigger: AAAGATTTTTATGCACCGCAATCTCAAGCAGAAGTG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCTTGTGAGCATCAACTaGACAGAAGCTATTCATACT +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFILVSIN*TEAIHT
Trigger: AGTATGAATAGCTTCTGTCAAGTTGATGCTCACAAG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCAACATCACACTTATCTaGTCTTTCCTCCTGGAATTC +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFINITLI*SFLLEF
Trigger: GAATTCCAGGAGGAAAGACAAGATAAGTGTGATGTT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTCTTTCAGAAGCCATTaGCCTTTGTCAATCAGTACT +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFISFRSH*PLSIST
Trigger: AGTACTGATTGACAAAGGCAAATGGCTTCTGAAAGA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTCAATATCAGATTCTTaGCGATATGCAAATCCTCGG +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFISISDS*RYANPR
Trigger: CCGAGGATTTGCATATCGCAAAGAATCTGATATTGA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCCTCATACTTGCTTTATaGTTCTCTTCCCTGAACACA +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFILILAL*FSSLNT
Trigger: TGTGTTCAGGGAAGAGAACAATAAAGCAAGTATGAG...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp ATTTCTAAGGAATGGATTAGTTCTTGGTCATGGGTTAGTAAAAGGGAAACCATTTTTCTGCACCTGTCATaGTGCCTGTGTATATGCGAA +
Preference number: 5 (lower is better)
Translates to: ISKEWISSWSWVSKRETIFLHLS*CLCICE
Trigger: TTCGCATATACACAGGCACAATGACAGGTGCAGAAA...AATGGTTTCCCTTTTACTAACCCATGACCAAGAACTAATCCATTCCTTAGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTTGATACCAGTTTTGTaGTCCAATACCACACAATCA +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFILIPVL*SNTTQS
Trigger: TGATTGTGTGGTATTGGACAACAAAACTGGTATCAA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTTCTTGATACCAGTTTaGTTGTCCAATACCACACAA +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIFLIPV*LSNTTQ
Trigger: TTGTGTGGTATTGGACAACAAAACTGGTATCAAGAA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTTCCAGAGTTATTACTaGAAAAATGGGTTGCATCTG +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIFQSYY*KNGLHL
Trigger: CAGATGCAACCCATTTTTCAAGTAATAACTCTGGAA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGATACCTGGAATTTATaGCTTGCTGTCGAGATTTTT +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIDTWNL*LAVEIF
Trigger: AAAAATCTCGACAGCAAGCAATAAATTCCAGGTATC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTTATTAAGAATTCCTTaGGTTGCAAGCTGTCCATCT +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFILLRIP*VASCPS
Trigger: AGATGGACAGCTTGCAACCAAAGGAATTCTTAATAA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCAAACTAAACTCTTCTTaGCCATTCCTCTCAAATACC +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIKLNSS*PFLSNT
Trigger: GGTATTTGAGAGGAATGGCAAAGAAGAGTTTAGTTT...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTCTTCACCAGTGTCATaGGCAATAAAAGACTTATCT +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFISSPVS*AIKDLS
Trigger: AGATAAGTCTTTTATTGCCAATGACACTGGTGAAGA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTGGATGAATTACATATaGCAGAATGAAAGGGAACAC +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIWMNYI*QNEREH
Trigger: GTGTTCCCTTTCATTCTGCAATATGTAATTCATCCA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTTGCAGAAAGATCTATaGGAACCATGTCTTGTTCTT +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFILQKDL*EPCLVL
Trigger: AAGAACAAGACATGGTTCCAATAGATCTTTCTGCAA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCTCTGCTATCATCATTTaGTTTTGTACCAGGTTCTAC +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFISAIII*FCTRFY
Trigger: GTAGAACCTGGTACAAAACAAAATGATGATAGCAGA...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS-3UTR CAA 90 bp AAGTGGAAAATTCTTAGAGGTTATCTAGTCCGTATTCGTCACATGTGCTTCATCGATTTTGTCTCATACTaGCTTTATTGTTCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: KWKILRGYLVRIRHMCFIDFVSY*LYCSLP
Trigger: GGGAAGAGAACAATAAAGCAAGTATGAGACAAAATC...GATGAAGCACATGTGACGAATACGGACTAGATAACCTCTAAGAATTTTCCACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS TCA 90 bp AATAAGTTGTTATTCTCATCGACTGCTTTAAAGATTTCATTTGTCTaGCCGCTGAGGTCTTGTGTATTTGAATCCACATTACCCACAACT +
Preference number: 5 (lower is better)
Translates to: NKLLFSSTALKISFV*PLRSCVFESTLPTT
Trigger: AGTTGTGGGTAATGTGGATTCAAATACACAAGACCTCAGCGGTCAGACAAATGAAATCTTTAAAGCAGTCGATGAGAATAACAACTTATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS TCA 90 bp AAACTTGATTTCATTGTTTTTGGACTGATGAAGTCTTCGTTTTCCTaGATCACCTCTGGTACCGATGAGGTTGATAAATACATTAGACTC +
Preference number: 5 (lower is better)
Translates to: KLDFIVFGLMKSSFS*ITSGTDEVDKYIRL
Trigger: GAGTCTAATGTATTTATCAACCTCATCGGTACCAGAGGTGATTCAGGAAAACGAAGACTTCATCAGTCCAAAAACAATGAAATCAAGTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000637698.1
ENST00000650534.1
CDS CCA 90 bp TTGAGATTAATCTTGAATATATCTGCAGTGTTAGGGTTAAACAGCTaGTGTTTCCCAGATCCCAAAATAATAGGACCTGAACATTTTGTT +
Preference number: 5 (lower is better)
Translates to: LRLILNISAVLGLNS*CFPDPKIIGPEHFV
Trigger: AACAAAATGTTCAGGTCCTATTATTTTGGGATCTGGGAAACACCAGCTGTTTAACCCTAACACTGCAGATATATTCAAGATTAATCTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS CAA 90 bp CTAATGGCCCGGCTGCTGAGCCAGGGCCGCGGGCGCCGACGGGCTTaGTCCAGGTCTACAGGCTGCACCTTCCTGCCGTGGGAACATAGG +
Preference number: 6 (lower is better)
Translates to: LMARLLSQGRGRRRA*SRSTGCTFLPWEHR
Trigger: CCTATGTTCCCACGGCAGGAAGGTGCAGCCTGTAGACCTGGACAAAGCCCGTCGGCGCCCGCGGCCCTGGCTCAGCAGCCGGGCCATTAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220676.2
ENST00000636932.1
ENST00000637698.1
CDS GCA 72 bp CATAGGGCCGGGCCAGGTTCTAGGCAGAGAAGCGTCTaGATTCCGAGGCGCAGTCTGGGCTGGAGCCTGTCA +
Preference number: 6 (lower is better)
Translates to: HRAGPGSRQRSV*IPRRSLGWSLS
Trigger: TGACAGGCTCCAGCCCAGACTGCGCCTCGGAATGCAGACGCTTCTCTGCCTAGAACCTGGCCCGGCCCTATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522001.2
CDS CAA 72 bp AGGCTGGGAACCCTCCTTCCGTCCGTAGCGTACAGCTaGACCACAGGGCGCTGCATGACCTCTGTCAGGTGC +
Preference number: 6 (lower is better)
Translates to: RLGTLLPSVAYS*TTGRCMTSVRC
Trigger: GCACCTGACAGAGGTCATGCAGCGCCCTGTGGTCAAGCTGTACGCTACGGACGGAAGGAGGGTTCCCAGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220676.2
ENST00000636932.1
ENST00000637698.1
CDS GCA 72 bp GACGGGCTTTGTCCAGGTCTACAGGCTGCACCTTCCTaGCGTGGGAACATAGGTAGGACTCGCCGTCCTCCA +
Preference number: 6 (lower is better)
Translates to: DGLCPGLQAAPS*RGNIGRTRRPP
Trigger: TGGAGGACGGCGAGTCCTACCTATGTTCCCACGGCAGGAAGGTGCAGCCTGTAGACCTGGACAAAGCCCGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220676.2
ENST00000636932.1
ENST00000637698.1
CDS CAA 72 bp GGAGCGAGGGTTGACCACCACCCTGACCCCGCCGAATaGGGGGTCTCCGCTCTTGTAGAAACTGATTCGCTT +
Preference number: 6 (lower is better)
Translates to: GARVDHHPDPAE*GVSALVETDSL
Trigger: AAGCGAATCAGTTTCTACAAGAGCGGAGACCCCCAATTCGGCGGGGTCAGGGTGGTGGTCAACCCTCGCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220676.2
ENST00000636932.1
ENST00000637698.1
CDS CAA 90 bp ACTGCCTGGAGGCTGGGAACCCTCCTTCCGTCCGTAGCGTACAGCTaGACCACAGGGCGCTGCATGACCTCTGTCAGGTGCTGTAGAAAT +
Preference number: 6 (lower is better)
Translates to: TAWRLGTLLPSVAYS*TTGRCMTSVRCCRN
Trigger: ATTTCTACAGCACCTGACAGAGGTCATGCAGCGCCCTGTGGTCAAGCTGTACGCTACGGACGGAAGGAGGGTTCCCAGCCTCCAGGCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220676.2
ENST00000636932.1
ENST00000637698.1
CDS CAA 90 bp GGACTTAAAGGAGCGAGGGTTGACCACCACCCTGACCCCGCCGAATaGGGGGTCTCCGCTCTTGTAGAAACTGATTCGCTTGGCCACAAC +
Preference number: 6 (lower is better)
Translates to: GLKGARVDHHPDPAE*GVSALVETDSLGHN
Trigger: GTTGTGGCCAAGCGAATCAGTTTCTACAAGAGCGGAGACCCCCAATTCGGCGGGGTCAGGGTGGTGGTCAACCCTCGCTCCTTTAAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220676.2
ENST00000636932.1
ENST00000637698.1
CDS GCA 72 bp AGCTTGACCACAGGGCGCTGCATGACCTCTGTCAGGTaGTGTAGAAATGCCTCGAAGCTCTGGGTGACCCTC +
Preference number: 6 (lower is better)
Translates to: SLTTGRCMTSVR*CRNASKLWVTL
Trigger: GAGGGTCACCCAGAGCTTCGAGGCATTTCTACAGCACCTGACAGAGGTCATGCAGCGCCCTGTGGTCAAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220676.2
ENST00000636932.1
ENST00000637698.1
CDS GCA 72 bp CTTCCGTCCGTAGCGTACAGCTTGACCACAGGGCGCTaGATGACCTCTGTCAGGTGCTGTAGAAATGCCTCG +
Preference number: 6 (lower is better)
Translates to: LPSVAYSLTTGR*MTSVRCCRNAS
Trigger: CGAGGCATTTCTACAGCACCTGACAGAGGTCATGCAGCGCCCTGTGGTCAAGCTGTACGCTACGGACGGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220676.2
ENST00000636932.1
ENST00000637698.1
CDS GCA 72 bp TCCATACATGAGAAAGGAGGACTCAGCGGGCCCCAATaGTCCTTCCAGCTCCAGCTTTCTAGCAGCGGGCGT +
Preference number: 6 (lower is better)
Translates to: SIHEKGGLSGPQ*SFQLQLSSSGR
Trigger: ACGCCCGCTGCTAGAAAGCTGGAGCTGGAAGGAGCATTGGGGCCCGCTGAGTCCTCCTTTCTCATGTATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518787.2
ENST00000522001.2
ENST00000602362.2
ENST00000646684.1
CDS CCA 72 bp ACCTCTGTCAGGTGCTGTAGAAATGCCTCGAAGCTCTaGGTGACCCTCCTGCTCAGAAGAACCGCACGCCTC +
Preference number: 6 (lower is better)
Translates to: TSVRCCRNASKL*VTLLLRRTARL
Trigger: GAGGCGTGCGGTTCTTCTGAGCAGGAGGGTCACCCAGAGCTTCGAGGCATTTCTACAGCACCTGACAGAGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220676.2
ENST00000636932.1
ENST00000637698.1
CDS CAA 72 bp TCCAGCAGAGCATCAAAGGACTTAAAGGAGCGAGGGTaGACCACCACCCTGACCCCGCCGAATTGGGGGTCT +
Preference number: 6 (lower is better)
Translates to: SSRASKDLKERG*TTTLTPPNWGS
Trigger: AGACCCCCAATTCGGCGGGGTCAGGGTGGTGGTCAACCCTCGCTCCTTTAAGTCCTTTGATGCTCTGCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220676.2
ENST00000636932.1
ENST00000637698.1
CDS CAA 90 bp GACAAGTTATCCAGCAGAGCATCAAAGGACTTAAAGGAGCGAGGGTaGACCACCACCCTGACCCCGCCGAATTGGGGGTCTCCGCTCTTG +
Preference number: 6 (lower is better)
Translates to: DKLSSRASKDLKERG*TTTLTPPNWGSPLL
Trigger: CAAGAGCGGAGACCCCCAATTCGGCGGGGTCAGGGTGGTGGTCAACCCTCGCTCCTTTAAGTCCTTTGATGCTCTGCTGGATAACTTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220676.2
ENST00000636932.1
ENST00000637698.1
CDS TCA 72 bp AGACTTAGGGCCTGCCTCCACATCCGCATCCATACATaGGAAAGGAGGACTCAGCGGGCCCCAATGCTCCTT +
Preference number: 6 (lower is better)
Translates to: RLRACLHIRIHT*ERRTQRAPMLL
Trigger: AAGGAGCATTGGGGCCCGCTGAGTCCTCCTTTCTCATGTATGGATGCGGATGTGGAGGCAGGCCCTAAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000518787.2
ENST00000522001.2
ENST00000602362.2
ENST00000646684.1
CDS TCA 72 bp GCTCCTTCCAGCTCCAGCTTTCTAGCAGCGGGCGTGTaGATGTCTGCACAGCAGTCAGAACAACTCGTACCT +
Preference number: 6 (lower is better)
Translates to: APSSSSFLAAGV*MSAQQSEQLVP
Trigger: AGGTACGAGTTGTTCTGACTGCTGTGCAGACATTCACACGCCCGCTGCTAGAAAGCTGGAGCTGGAAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518787.2
ENST00000522001.2
ENST00000602362.2
ENST00000646684.1
CDS GCA 72 bp AACTGTGTGACCAGGAACCAGTGCCGACTCAAGAAGTaGACAGCGGTTAGGCTGATAAAGCACCCGCAGCTC +
Preference number: 6 (lower is better)
Translates to: NCVTRNQCRLKK*TAVRLIKHPQL
Trigger: GAGCTGCGGGTGCTTTATCAGCCTAACCGCTGTGCACTTCTTGAGTCGGCACTGGTTCCTGGTCACACAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS GCA 72 bp TCCAGTAGGATTTTTCAGACTGGCTTCCCACTCCAGTaGAGCTTCCATCAGGCTGGAGACACAGGGCCTGAC +
Preference number: 6 (lower is better)
Translates to: SSRIFQTGFPLQ*SFHQAGDTGPD
Trigger: GTCAGGCCCTGTGTCTCCAGCCTGATGGAAGCTGCACTGGAGTGGGAAGCCAGTCTGAAAAATCCTACTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS GCA 72 bp GCCCTTTCAGGAGATGGTAGACCCAGTCTCTCCTACTaGACTGGGACTACTTTCTGCGAGCAATTCCCGCTG +
Preference number: 6 (lower is better)
Translates to: ALSGDGRPSLSY*TGTTFCEQFPL
Trigger: CAGCGGGAATTGCTCGCAGAAAGTAGTCCCAGTGCAGTAGGAGAGACTGGGTCTACCATCTCCTGAAAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637698.1
ENST00000650534.1
CDS TCA 72 bp AAGAACCCCACCAGGCACTTGCAGGGAAGGTTGAGGTaGACACCGAGAAAGAGTCCTTCTCTTTCTGGCTGG +
Preference number: 6 (lower is better)
Translates to: KNPTRHLQGRLR*TPRKSPSLSGW
Trigger: CCAGCCAGAAAGAGAAGGACTCTTTCTCGGTGTTCACCTCAACCTTCCCTGCAAGTGCCTGGTGGGGTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650534.1
CDS GCA 72 bp CCCAAAGAGACAGAGGAAAACCTCAGACTCCGTCTCTaGATGCTTCAGCTGCCCAGTGTAGACGTCAACCTG +
Preference number: 6 (lower is better)
Translates to: PKETEENLRLRL*MLQLPSVDVNL
Trigger: CAGGTTGACGTCTACACTGGGCAGCTGAAGCATGCAGAGACGGAGTCTGAGGTTTTCCTCTGTCTCTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS GCA 72 bp AGACCCAGTCTCTCCTACTGCACTGGGACTACTTTCTaGGAGCAATTCCCGCTGGGTCTTGCCATCATCTTG +
Preference number: 6 (lower is better)
Translates to: RPSLSYCTGTTF*EQFPLGLAIIL
Trigger: CAAGATGATGGCAAGACCCAGCGGGAATTGCTCGCAGAAAGTAGTCCCAGTGCAGTAGGAGAGACTGGGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637698.1
ENST00000650534.1
CDS CCA 72 bp GCCCAGTGTGGAGATAAAACCAGAGTTGGAAGTCCCTaGGGCTGCAGACAGAGGAGGATTGCAGCAGTTCAA +
Preference number: 6 (lower is better)
Translates to: AQCGDKTRVGSP*GCRQRRIAAVQ
Trigger: TTGAACTGCTGCAATCCTCCTCTGTCTGCAGCCCCAGGGACTTCCAACTCTGGTTTTATCTCCACACTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646684.1
CDS TCA 72 bp AGAAACAGAAACTTAGGTGAGAGAAGGTGCACGGGATaGACCCGTGCAGCAGGTGTTCTGAACCACTGCGCA +
Preference number: 6 (lower is better)
Translates to: RNRNLGERRCTG*TRAAGVLNHCA
Trigger: TGCGCAGTGGTTCAGAACACCTGCTGCACGGGTTCATCCCGTGCACCTTCTCTCACCTAAGTTTCTGTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646684.1
CDS TCA 72 bp CCAGTCCAGGCCCCACCTAAAGCCATTGGATGCTATTaGCATAGAGATGGCCCTAAATGTGCTGCAGGCCAT +
Preference number: 6 (lower is better)
Translates to: PVQAPPKAIGCY*HRDGPKCAAGH
Trigger: ATGGCCTGCAGCACATTTAGGGCCATCTCTATGTCAATAGCATCCAATGGCTTTAGGTGGGGCCTGGACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646684.1
CDS CAA 90 bp CCGGGCTCTCTGACTATGACTTGTTCACAGTACCAGTACTGTGATTaGTCACTGGCCTCACAGCGCAACAGCACCTTCTGCAGTTTTCCA +
Preference number: 6 (lower is better)
Translates to: PGSLTMTCSQYQYCD*SLASQRNSTFCSFP
Trigger: TGGAAAACTGCAGAAGGTGCTGTTGCGCTGTGAGGCCAGTGACAAATCACAGTACTGGTACTGTGAACAAGTCATAGTCAGAGAGCCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS TCA 72 bp AAATGTGCTGCAGGCCATGTGGGTCTCCTGCTTGGATaGCAAGCTCTAGGCCTGTCAGACCTAGAGCAAATA +
Preference number: 6 (lower is better)
Translates to: KCAAGHVGLLLG*QALGLSDLEQI
Trigger: TATTTGCTCTAGGTCTGACAGGCCTAGAGCTTGTCATCCAAGCAGGAGACCCACATGGCCTGCAGCACATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646684.1
CDS GCA 72 bp CAGCTCCAGCTTTCTAGCAGCGGGCGTGTGAATGTCTaGACAGCAGTCAGAACAACTCGTACCTTAACTGAA +
Preference number: 6 (lower is better)
Translates to: QLQLSSSGRVNV*TAVRTTRTLTE
Trigger: TTCAGTTAAGGTACGAGTTGTTCTGACTGCTGTGCAGACATTCACACGCCCGCTGCTAGAAAGCTGGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000518787.2
ENST00000522001.2
ENST00000602362.2
ENST00000646684.1
CDS GCA 72 bp TGGGACTACTTTCTGCGAGCAATTCCCGCTGGGTCTTaGCATCATCTTGGTACTCATCTAGCCATCTGTTGC +
Preference number: 6 (lower is better)
Translates to: WDYFLRAIPAGS*HHLGTHLAICC
Trigger: GCAACAGATGGCTAGATGAGTACCAAGATGATGGCAAGACCCAGCGGGAATTGCTCGCAGAAAGTAGTCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637698.1
ENST00000650534.1
CDS GCA 72 bp AGTTGGAAGTCCCTGGGGCTGCAGACAGAGGAGGATTaGAGCAGTTCAACTCTACAACAAAGGCTGAGAAGA +
Preference number: 6 (lower is better)
Translates to: SWKSLGLQTEED*SSSTLQQRLRR
Trigger: TCTTCTCAGCCTTTGTTGTAGAGTTGAACTGCTGCAATCCTCCTCTGTCTGCAGCCCCAGGGACTTCCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646684.1
CDS CCA 72 bp CTTCCAAAACACAGACTTCAGGGGCACATGCCTCACTaGCAGAGCAACCTCCATCCAAAGAGGAGATTCCTT +
Preference number: 6 (lower is better)
Translates to: LPKHRLQGHMPH*QSNLHPKRRFL
Trigger: AAGGAATCTCCTCTTTGGATGGAGGTTGCTCTGCCAGTGAGGCATGTGCCCCTGAAGTCTGTGTTTTGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS CCA 72 bp GTCTGTCTTCTCTCCAATGGCGTCAACTGTGCCATCTaGATGCAAACGGACAAACCCTCCAGTCAGCTTGTT +
Preference number: 6 (lower is better)
Translates to: VCLLSNGVNCAI*MQTDKPSSQLV
Trigger: AACAAGCTGACTGGAGGGTTTGTCCGTTTGCATCCAGATGGCACAGTTGACGCCATTGGAGAGAAGACAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS CCA 72 bp ACTGCACTGGGACTACTTTCTGCGAGCAATTCCCGCTaGGTCTTGCCATCATCTTGGTACTCATCTAGCCAT +
Preference number: 6 (lower is better)
Translates to: TALGLLSASNSR*VLPSSWYSSSH
Trigger: ATGGCTAGATGAGTACCAAGATGATGGCAAGACCCAGCGGGAATTGCTCGCAGAAAGTAGTCCCAGTGCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637698.1
ENST00000650534.1
CDS CAA 72 bp TCGTGTCCTGGAAGGAAGAGCTGCTCTGAGCTGTCCTaGCGAAGACTTATTGGCCCAGTGACTCCTTTATCT +
Preference number: 6 (lower is better)
Translates to: SCPGRKSCSELS*RRLIGPVTPLS
Trigger: AGATAAAGGAGTCACTGGGCCAATAAGTCTTCGCAAGGACAGCTCAGAGCAGCTCTTCCTTCCAGGACACGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS CAA 72 bp CTGGGACTACTTTCTGCGAGCAATTCCCGCTGGGTCTaGCCATCATCTTGGTACTCATCTAGCCATCTGTTG +
Preference number: 6 (lower is better)
Translates to: LGLLSASNSRWV*PSSWYSSSHLL
Trigger: CAACAGATGGCTAGATGAGTACCAAGATGATGGCAAGACCCAGCGGGAATTGCTCGCAGAAAGTAGTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637698.1
ENST00000650534.1
CDS CAA 90 bp GGCCACAACAGGATGAGTGAGGCTCAAATGGCGAGGGGGTGGAACTaGACCTTCAGAAGACGTAGGATGAATGATGGAAAAACCAGTAGA +
Preference number: 6 (lower is better)
Translates to: GHNRMSEAQMARGWN*TFRRRRMNDGKTSR
Trigger: TCTACTGGTTTTTCCATCATTCATCCTACGTCTTCTGAAGGTCAAGTTCCACCCCCTCGCCATTTGAGCCTCACTCATCCTGTTGTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000220676.2
ENST00000636932.1
ENST00000637698.1
CDS CAA 90 bp CCTACTGCACTGGGACTACTTTCTGCGAGCAATTCCCGCTGGGTCTaGCCATCATCTTGGTACTCATCTAGCCATCTGTTGCATAGAAAC +
Preference number: 6 (lower is better)
Translates to: PTALGLLSASNSRWV*PSSWYSSSHLLHRN
Trigger: GTTTCTATGCAACAGATGGCTAGATGAGTACCAAGATGATGGCAAGACCCAGCGGGAATTGCTCGCAGAAAGTAGTCCCAGTGCAGTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637698.1
ENST00000650534.1
CDS TCA 72 bp CACACACTGGCAAAGAACAGAACTAGCCTGGGGTCATaGGTGTTGGTATGCCTCTCATTCTGTGAAGACCTG +
Preference number: 6 (lower is better)
Translates to: HTLAKNRTSLGS*VLVCLSFCEDL
Trigger: CAGGTCTTCACAGAATGAGAGGCATACCAACACTCATGACCCCAGGCTAGTTCTGTTCTTTGCCAGTGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522001.2
ENST00000602362.2
ENST00000646684.1
CDS TCA 72 bp GTCTCCTCTATCTCCCCATTCTGGATCCTGGAAGTCTaGAATCAAGACGTCAATGAGGCCATACTCCCTCTG +
Preference number: 6 (lower is better)
Translates to: VSSISPFWILEV*NQDVNEAILPL
Trigger: CAGAGGGAGTATGGCCTCATTGACGTCTTGATTTCAGACTTCCAGGATCCAGAATGGGGAGATAGAGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650534.1
CDS CCA 72 bp CACAACAGGATGAGTGAGGCTCAAATGGCGAGGGGGTaGAACTTGACCTTCAGAAGACGTAGGATGAATGAT +
Preference number: 6 (lower is better)
Translates to: HNRMSEAQMARG*NLTFRRRRMND
Trigger: ATCATTCATCCTACGTCTTCTGAAGGTCAAGTTCCACCCCCTCGCCATTTGAGCCTCACTCATCCTGTTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220676.2
ENST00000636932.1
ENST00000637698.1
CDS CCA 72 bp TCCCAAACCACACACTGGCAAAGAACAGAACTAGCCTaGGGTCATGAGTGTTGGTATGCCTCTCATTCTGTG +
Preference number: 6 (lower is better)
Translates to: SQTTHWQRTELA*GHECWYASHSV
Trigger: CACAGAATGAGAGGCATACCAACACTCATGACCCCAGGCTAGTTCTGTTCTTTGCCAGTGTGTGGTTTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522001.2
ENST00000602362.2
ENST00000646684.1
CDS CCA 72 bp TCTGCGAGCAATTCCCGCTGGGTCTTGCCATCATCTTaGTACTCATCTAGCCATCTGTTGCATAGAAACAGC +
Preference number: 6 (lower is better)
Translates to: SASNSRWVLPSS*YSSSHLLHRNS
Trigger: GCTGTTTCTATGCAACAGATGGCTAGATGAGTACCAAGATGATGGCAAGACCCAGCGGGAATTGCTCGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000637698.1
ENST00000650534.1
CDS CCA 72 bp AGCTCCTGGTGGTGGCTGTCAATCTTTGGCATCCTTTaGCTTACAGCTCACCAATCTAATCTCTGCCTCTGT +
Preference number: 6 (lower is better)
Translates to: SSWWWLSIFGIL*LTAHQSNLCLC
Trigger: ACAGAGGCAGAGATTAGATTGGTGAGCTGTAAGCCAAAGGATGCCAAAGATTGACAGCCACCACCAGGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650534.1
CDS CAA 72 bp CTGACTATGACTTGTTCACAGTACCAGTACTGTGATTaGTCACTGGCCTCACAGCGCAACAGCACCTTCTGC +
Preference number: 6 (lower is better)
Translates to: LTMTCSQYQYCD*SLASQRNSTFC
Trigger: GCAGAAGGTGCTGTTGCGCTGTGAGGCCAGTGACAAATCACAGTACTGGTACTGTGAACAAGTCATAGTCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS TCA 72 bp ACTACAGGAAGCTCACAGACAACATCCCCATCTGCCTaGATCCGAGACAGCCATACGTTTGCTGCAAAATCT +
Preference number: 6 (lower is better)
Translates to: TTGSSQTTSPSA*IRDSHTFAAKS
Trigger: AGATTTTGCAGCAAACGTATGGCTGTCTCGGATTCAGGCAGATGGGGATGTTGTCTGTGAGCTTCCTGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS TCA 72 bp CTCTCTGACTATGACTTGTTCACAGTACCAGTACTGTaGTTTGTCACTGGCCTCACAGCGCAACAGCACCTT +
Preference number: 6 (lower is better)
Translates to: LSDYDLFTVPVL*FVTGLTAQQHL
Trigger: AAGGTGCTGTTGCGCTGTGAGGCCAGTGACAAATCACAGTACTGGTACTGTGAACAAGTCATAGTCAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS GCA 72 bp CATATTTGTCTGTCTTCTCTCCAATGGCGTCAACTGTaGCATCTGGATGCAAACGGACAAACCCTCCAGTCA +
Preference number: 6 (lower is better)
Translates to: HICLSSLQWRQL*HLDANGQTLQS
Trigger: TGACTGGAGGGTTTGTCCGTTTGCATCCAGATGGCACAGTTGACGCCATTGGAGAGAAGACAGACAAATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS GCA 72 bp ATGACGATCAAAAACAACTGTGTGACCAGGAACCAGTaGCGACTCAAGAAGTGCACAGCGGTTAGGCTGATA +
Preference number: 6 (lower is better)
Translates to: MTIKNNCVTRNQ*RLKKCTAVRLI
Trigger: TATCAGCCTAACCGCTGTGCACTTCTTGAGTCGGCACTGGTTCCTGGTCACACAGTTGTTTTTGATCGTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS GCA 72 bp TGTTGCATGGTCACCCTCTGCAAGTTCCACTCGGGTTaGTCACTGGTTCCATCATGTCCTATCCTTATCTTA +
Preference number: 6 (lower is better)
Translates to: CCMVTLCKFHSG*SLVPSCPILIL
Trigger: TAAGATAAGGATAGGACATGATGGAACCAGTGAGCAACCCGAGTGGAACTTGCAGAGGGTGACCATGCAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS CCA 72 bp TGGCAAAGAACAGAACTAGCCTGGGGTCATGAGTGTTaGTATGCCTCTCATTCTGTGAAGACCTGCACACAA +
Preference number: 6 (lower is better)
Translates to: WQRTELAWGHEC*YASHSVKTCTQ
Trigger: TTGTGTGCAGGTCTTCACAGAATGAGAGGCATACCAACACTCATGACCCCAGGCTAGTTCTGTTCTTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522001.2
ENST00000602362.2
ENST00000646684.1
CDS CCA 72 bp ACTGCAAACACTTCACAGAACTCCCAAACCACACACTaGCAAAGAACAGAACTAGCCTGGGGTCATGAGTGT +
Preference number: 6 (lower is better)
Translates to: TANTSQNSQTTH*QRTELAWGHEC
Trigger: ACACTCATGACCCCAGGCTAGTTCTGTTCTTTGCCAGTGTGTGGTTTGGGAGTTCTGTGAAGTGTTTGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000522001.2
ENST00000602362.2
ENST00000646684.1
CDS CAA 72 bp AGGATGAGTGAGGCTCAAATGGCGAGGGGGTGGAACTaGACCTTCAGAAGACGTAGGATGAATGATGGAAAA +
Preference number: 6 (lower is better)
Translates to: RMSEAQMARGWN*TFRRRRMNDGK
Trigger: TTTTCCATCATTCATCCTACGTCTTCTGAAGGTCAAGTTCCACCCCCTCGCCATTTGAGCCTCACTCATCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220676.2
ENST00000636932.1
ENST00000637698.1
CDS CAA 72 bp TCCAGGTGTAGGGGGCCTATAAAAACGATGCTTTGCTaGGTCTTGAGTTCCCTGGATGATATCTGTGTCCAC +
Preference number: 6 (lower is better)
Translates to: SRCRGPIKTMLC*VLSSLDDICVH
Trigger: GTGGACACAGATATCATCCAGGGAACTCAAGACCAAGCAAAGCATCGTTTTTATAGGCCCCCTACACCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS CAA 72 bp ATGTTGCATGGTCACCCTCTGCAAGTTCCACTCGGGTaGCTCACTGGTTCCATCATGTCCTATCCTTATCTT +
Preference number: 6 (lower is better)
Translates to: MLHGHPLQVPLG*LTGSIMSYPYL
Trigger: AAGATAAGGATAGGACATGATGGAACCAGTGAGCAACCCGAGTGGAACTTGCAGAGGGTGACCATGCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS CAA 90 bp GTTGAGTCAGTTCCTCGAGTTCTGAAGAGGAGAGTTCATCCATCGTaGGGCCTGGGGCCAAATTACCAAAATGTGAATATGGTACCTCAC +
Preference number: 6 (lower is better)
Translates to: VESVPRVLKRRVHPS*GLGPNYQNVNMVPH
Trigger: GTGAGGTACCATATTCACATTTTGGTAATTTGGCCCCAGGCCCAACGATGGATGAACTCTCCTCTTCAGAACTCGAGGAACTGACTCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS CAA 90 bp GCTCTAGGCCTGTCAGACCTAGAGCAAATAAGATCTGTTTCTACGTaGAGTGCTCACAATGTGCTAAGCACTGTGTGTTGTGGCCTTACA +
Preference number: 6 (lower is better)
Translates to: ALGLSDLEQIRSVST*SAHNVLSTVCCGLT
Trigger: TGTAAGGCCACAACACACAGTGCTTAGCACATTGTGAGCACTCAACGTAGAAACAGATCTTATTTGCTCTAGGTCTGACAGGCCTAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646684.1
CDS TCA 72 bp CTTTCTGACTTTGCATTTCCCTTGGGGTACACACGCTaGGAGATCCCTGGTAATCTAGCAGGAAGCAAGTAT +
Preference number: 6 (lower is better)
Translates to: LSDFAFPLGYTR*EIPGNLAGSKY
Trigger: ATACTTGCTTCCTGCTAGATTACCAGGGATCTCTCAGCGTGTGTACCCCAAGGGAAATGCAAAGTCAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220676.2
ENST00000636932.1
ENST00000637698.1
CDS GCA 72 bp AGTGAACCCTCCTCTAATTGTGCTGGACCTAGGAACTaGAATGTTTGCCGTGTCACCTGGATTATTAGTAGC +
Preference number: 6 (lower is better)
Translates to: SEPSSNCAGPRN*NVCRVTWIISS
Trigger: GCTACTAATAATCCAGGTGACACGGCAAACATTGCAGTTCCTAGGTCCAGCACAATTAGAGGAGGGTTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522001.2
ENST00000602362.2
ENST00000646684.1
CDS GCA 72 bp ATCTTCTTGCTTTTCATATGTTGCATGGTCACCCTCTaGAAGTTCCACTCGGGTTGCTCACTGGTTCCATCA +
Preference number: 6 (lower is better)
Translates to: IFLLFICCMVTL*KFHSGCSLVPS
Trigger: TGATGGAACCAGTGAGCAACCCGAGTGGAACTTGCAGAGGGTGACCATGCAACATATGAAAAGCAAGAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS GCA 72 bp TTTTACTACAGGAAGCTCACAGACAACATCCCCATCTaGCTGAATCCGAGACAGCCATACGTTTGCTGCAAA +
Preference number: 6 (lower is better)
Translates to: FYYRKLTDNIPI*LNPRQPYVCCK
Trigger: TTTGCAGCAAACGTATGGCTGTCTCGGATTCAGGCAGATGGGGATGTTGTCTGTGAGCTTCCTGTAGTAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS CCA 72 bp CACTGCTGTTATTATCAAGTAGGGTGTCCACTGATGTaGTGTCTGCATTGCCACACATGCCAGGATTTTCAG +
Preference number: 6 (lower is better)
Translates to: HCCYYQVGCPLM*CLHCHTCQDFQ
Trigger: CTGAAAATCCTGGCATGTGTGGCAATGCAGACACCACATCAGTGGACACCCTACTTGATAATAACAGCAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS CCA 72 bp GCTGGACCTAGGAACTGCAATGTTTGCCGTGTCACCTaGATTATTAGTAGCGACTGCAAACACTTCACAGAA +
Preference number: 6 (lower is better)
Translates to: AGPRNCNVCRVT*IISSDCKHFTE
Trigger: TTCTGTGAAGTGTTTGCAGTCGCTACTAATAATCCAGGTGACACGGCAAACATTGCAGTTCCTAGGTCCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522001.2
ENST00000602362.2
ENST00000646684.1
CDS CAA 72 bp TGTAGGGGGCCTATAAAAACGATGCTTTGCTTGGTCTaGAGTTCCCTGGATGATATCTGTGTCCACAGTAGC +
Preference number: 6 (lower is better)
Translates to: CRGPIKTMLCLV*SSLDDICVHSS
Trigger: GCTACTGTGGACACAGATATCATCCAGGGAACTCAAGACCAAGCAAAGCATCGTTTTTATAGGCCCCCTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS CAA 72 bp GTTCCTCGAGTTCTGAAGAGGAGAGTTCATCCATCGTaGGGCCTGGGGCCAAATTACCAAAATGTGAATATG +
Preference number: 6 (lower is better)
Translates to: VPRVLKRRVHPS*GLGPNYQNVNM
Trigger: CATATTCACATTTTGGTAATTTGGCCCCAGGCCCAACGATGGATGAACTCTCCTCTTCAGAACTCGAGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS TCA 72 bp CCTTTATCTCCATACACCCAGAGAGTGACATTGGCTTaGGTTCCTGTATTTCCTGTCAGCACTAACACCTTC +
Preference number: 6 (lower is better)
Translates to: PLSPYTQRVTLA*VPVFPVSTNTF
Trigger: GAAGGTGTTAGTGCTGACAGGAAATACAGGAACTCAAGCCAATGTCACTCTCTGGGTGTATGGAGATAAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS GCA 72 bp AATGTTTGCCGTGTCACCTGGATTATTAGTAGCGACTaGAAACACTTCACAGAACTCCCAAACCACACACTG +
Preference number: 6 (lower is better)
Translates to: NVCRVTWIISSD*KHFTELPNHTL
Trigger: CAGTGTGTGGTTTGGGAGTTCTGTGAAGTGTTTGCAGTCGCTACTAATAATCCAGGTGACACGGCAAACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522001.2
ENST00000602362.2
ENST00000646684.1
CDS GCA 72 bp TCCTCTAATTGTGCTGGACCTAGGAACTGCAATGTTTaGCGTGTCACCTGGATTATTAGTAGCGACTGCAAA +
Preference number: 6 (lower is better)
Translates to: SSNCAGPRNCNV*RVTWIISSDCK
Trigger: TTTGCAGTCGCTACTAATAATCCAGGTGACACGGCAAACATTGCAGTTCCTAGGTCCAGCACAATTAGAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000522001.2
ENST00000602362.2
ENST00000646684.1
CDS GCA 72 bp TCATGGCCTATCACAATCTTACACAAATCTCCAAGGTaGACAGCCTCCAGGAAAAAGGTGTCAGTTTGTCCT +
Preference number: 6 (lower is better)
Translates to: SWPITILHKSPR*TASRKKVSVCP
Trigger: AGGACAAACTGACACCTTTTTCCTGGAGGCTGTGCACCTTGGAGATTTGTGTAAGATTGTGATAGGCCATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS GCA 72 bp GCGCAACAGCACCTTCTGCAGTTTTCCAAGCGACACTaGTGCTACTTGAAATTTATCAATCTGTCCTCTTTG +
Preference number: 6 (lower is better)
Translates to: AQQHLLQFSKRH*CYLKFINLSSL
Trigger: CAAAGAGGACAGATTGATAAATTTCAAGTAGCAGCAGTGTCGCTTGGAAAACTGCAGAAGGTGCTGTTGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS CCA 72 bp ATTGCAGACATTGACAGGAACGTAGGTCTCATCAATTaGGCAAGCTCCCTCATAGGTATGGTTCTCCTTTTG +
Preference number: 6 (lower is better)
Translates to: IADIDRNVGLIN*ASSLIGMVLLL
Trigger: CAAAAGGAGAACCATACCTATGAGGGAGCTTGCCCAATTGATGAGACCTACGTTCCTGTCAATGTCTGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS CCA 72 bp CATCAAAGACACCATATTTGTCTGTCTTCTCTCCAATaGCGTCAACTGTGCCATCTGGATGCAAACGGACAA +
Preference number: 6 (lower is better)
Translates to: HQRHHICLSSLQ*RQLCHLDANGQ
Trigger: TTGTCCGTTTGCATCCAGATGGCACAGTTGACGCCATTGGAGAGAAGACAGACAAATATGGTGTCTTTGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS CCA 72 bp TGGTCACCCTCTGCAAGTTCCACTCGGGTTGCTCACTaGTTCCATCATGTCCTATCCTTATCTTATATATGT +
Preference number: 6 (lower is better)
Translates to: WSPSASSTRVAH*FHHVLSLSYIC
Trigger: ACATATATAAGATAAGGATAGGACATGATGGAACCAGTGAGCAACCCGAGTGGAACTTGCAGAGGGTGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS CAA 72 bp CTGAGTCCAAAGTGGCTTGTAGTTGACTCCACTAAATaGGCAACAGCAGCTTTCAAGTCATCAGCTTCCTCT +
Preference number: 6 (lower is better)
Translates to: LSPKWLVVDSTK*ATAAFKSSASS
Trigger: AGAGGAAGCTGATGACTTGAAAGCTGCTGTTGCCAATTTAGTGGAGTCAACTACAAGCCACTTTGGACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS CAA 90 bp AAATGTAGACGTTTGCTACTGTTCCAGCATTCCATAGCTCACCCGTaGCCACATTCACTTCATATATTGTCACTGGAAGGACAGGTTGTC +
Preference number: 6 (lower is better)
Translates to: KCRRLLLFQHSIAHP*PHSLHILSLEGQVV
Trigger: GACAACCTGTCCTTCCAGTGACAATATATGAAGTGAATGTGGCAACGGGTGAGCTATGGAATGCTGGAACAGTAGCAAACGTCTACATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS CAA 90 bp ATCTGTTTCTACGTTGAGTGCTCACAATGTGCTAAGCACTGTGTGTaGTGGCCTTACACAGCCACAGCATTATTCCCAACCTACAGATAT +
Preference number: 6 (lower is better)
Translates to: ICFYVECSQCAKHCV*WPYTATALFPTYRY
Trigger: ATATCTGTAGGTTGGGAATAATGCTGTGGCTGTGTAAGGCCACAACACACAGTGCTTAGCACATTGTGAGCACTCAACGTAGAAACAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646684.1
CDS TCA 72 bp ATCCTTGGTATAAATCATTGGTTTTGCCTGCCCATCTaGCTGAAGTCCAACAAACAATCCTGGGCTCTTCGT +
Preference number: 6 (lower is better)
Translates to: ILGINHWFCLPI*LKSNKQSWALR
Trigger: ACGAAGAGCCCAGGATTGTTTGTTGGACTTCAGTCAGATGGGCAGGCAAAACCAATGATTTATACCAAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS GCA 72 bp AGACCTAGAGCAAATAAGATCTGTTTCTACGTTGAGTaGTCACAATGTGCTAAGCACTGTGTGTTGTGGCCT +
Preference number: 6 (lower is better)
Translates to: RPRANKICFYVE*SQCAKHCVLWP
Trigger: AGGCCACAACACACAGTGCTTAGCACATTGTGAGCACTCAACGTAGAAACAGATCTTATTTGCTCTAGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646684.1
CDS CCA 72 bp GGAACCATGTCTTGTTCTTTCTCACTGAGTCCAAAGTaGCTTGTAGTTGACTCCACTAAATTGGCAACAGCA +
Preference number: 6 (lower is better)
Translates to: GTMSCSFSLSPK*LVVDSTKLATA
Trigger: TGCTGTTGCCAATTTAGTGGAGTCAACTACAAGCCACTTTGGACTCAGTGAGAAAGAACAAGACATGGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS CAA 90 bp GTGGATAGAAGCAAACATTCTCATCCTTGGTATAAATCATTGGTTTaGCCTGCCCATCTGACTGAAGTCCAACAAACAATCCTGGGCTCT +
Preference number: 6 (lower is better)
Translates to: VDRSKHSHPWYKSLV*PAHLTEVQQTILGS
Trigger: AGAGCCCAGGATTGTTTGTTGGACTTCAGTCAGATGGGCAGGCAAAACCAATGATTTATACCAAGGATGAGAATGTTTGCTTCTATCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS CAA 90 bp GCTTTTCATATGTTGCATGGTCACCCTCTGCAAGTTCCACTCGGGTaGCTCACTGGTTCCATCATGTCCTATCCTTATCTTATATATGTT +
Preference number: 6 (lower is better)
Translates to: AFHMLHGHPLQVPLG*LTGSIMSYPYLIYV
Trigger: AACATATATAAGATAAGGATAGGACATGATGGAACCAGTGAGCAACCCGAGTGGAACTTGCAGAGGGTGACCATGCAACATATGAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS GCA 72 bp GGGCCAAATTACCAAAATGTGAATATGGTACCTCACTaGTGTTATTATCAAGTAGGGTGTCCACTGATGTGG +
Preference number: 6 (lower is better)
Translates to: GPNYQNVNMVPH*CYYQVGCPLMW
Trigger: CCACATCAGTGGACACCCTACTTGATAATAACAGCAGTGAGGTACCATATTCACATTTTGGTAATTTGGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS GCA 72 bp GATTTGCATAGCCTGCTGATGATGCATCAGCTATTTTaGCATGACGATCAAAAACAACTGTGTGACCAGGAA +
Preference number: 6 (lower is better)
Translates to: DLHSLLMMHQLF*HDDQKQLCDQE
Trigger: TTCCTGGTCACACAGTTGTTTTTGATCGTCATGGCAAAATAGCTGATGCATCATCAGCAGGCTATGCAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS CCA 72 bp TGGAGAATAAGCCTTATTTACAGTGCACATCTCACATaGAGAGCAAGTCACTTCCAAAACACAGACTTCAGG +
Preference number: 6 (lower is better)
Translates to: WRISLIYSAHLT*RASHFQNTDFR
Trigger: CCTGAAGTCTGTGTTTTGGAAGTGACTTGCTCTCCATGTGAGATGTGCACTGTAAATAAGGCTTATTCTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS CAA 72 bp TGCCATTCCTCTCAAATACCCAGATGCCACTTCTGCTaGAGATTGCGGTGCATAAAAATCTTTGGGTTTTTG +
Preference number: 6 (lower is better)
Translates to: CHSSQIPRCHFC*RLRCIKIFGFL
Trigger: CAAAAACCCAAAGATTTTTATGCACCGCAATCTCAAGCAGAAGTGGCATCTGGGTATTTGAGAGGAATGGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS CAA 72 bp GAGGTCTTTTGGAGTTTCCTCTTCTATAGGATCTACTaGAATGGCAGCCTCTACACTTTGCCTTTTTCTAGC +
Preference number: 6 (lower is better)
Translates to: EVFWSFLFYRIY*NGSLYTLPFSS
Trigger: GCTAGAAAAAGGCAAAGTGTAGAGGCTGCCATTCAAGTAGATCCTATAGAAGAGGAAACTCCAAAAGACCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS CAA 72 bp AATTGGGCAAGCTCCCTCATAGGTATGGTTCTCCTTTaGAGCACAAGCCTTATCAGAAAACACAGTATCAGT +
Preference number: 6 (lower is better)
Translates to: NWASSLIGMVLL*STSLIRKHSIS
Trigger: ACTGATACTGTGTTTTCTGATAAGGCTTGTGCTCAAAAGGAGAACCATACCTATGAGGGAGCTTGCCCAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS CAA 72 bp CTTCGTTTTCCTGAATCACCTCTGGTACCGATGAGGTaGATAAATACATTAGACTCTGTTTCTGCACCTGTC +
Preference number: 6 (lower is better)
Translates to: LRFPESPLVPMR*INTLDSVSAPV
Trigger: GACAGGTGCAGAAACAGAGTCTAATGTATTTATCAACCTCATCGGTACCAGAGGTGATTCAGGAAAACGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000637698.1
ENST00000650534.1
CDS CAA 90 bp ATACTCTTTCTGACTGATGACTACCCTTCTCCTCTGTATGATGATTaGCTATTCTTTCCTTGGCACAGGTTTCATTGCGAACATCCAGCA +
Preference number: 6 (lower is better)
Translates to: ILFLTDDYPSPLYDD*LFFPWHRFHCEHPA
Trigger: TGCTGGATGTTCGCAATGAAACCTGTGCCAAGGAAAGAATAGCAAATCATCATACAGAGGAGAAGGGTAGTCATCAGTCAGAAAGAGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS TCA 72 bp CTTTGGAGTTTAAAAAGTCAATGGTATTGCAGACATTaGCAGGAACGTAGGTCTCATCAATTGGGCAAGCTC +
Preference number: 6 (lower is better)
Translates to: LWSLKSQWYCRH*QERRSHQLGKL
Trigger: GAGCTTGCCCAATTGATGAGACCTACGTTCCTGTCAATGTCTGCAATACCATTGACTTTTTAAACTCCAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS TCA 72 bp ATTGCGAACATCCAGCAAGTCCTCATGAAAAGGTTCTaGGTCACTACCATGAGGCATGTTAAAGTAATTGCA +
Preference number: 6 (lower is better)
Translates to: IANIQQVLMKRF*VTTMRHVKVIA
Trigger: TGCAATTACTTTAACATGCCTCATGGTAGTGACTCAGAACCTTTTCATGAGGACTTGCTGGATGTTCGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS GCA 72 bp AAATTCTCGACAGATTTCCCCATCCTCTTGATCTCGTaGCAACCATCGTTGAACAGGTACATAAAACTGTTT +
Preference number: 6 (lower is better)
Translates to: KFSTDFPILLIS*QPSLNRYIKLF
Trigger: AAACAGTTTTATGTACCTGTTCAACGATGGTTGGCACGAGATCAAGAGGATGGGGAAATCTGTCGAGAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS GCA 72 bp CAACAGCACCTTCTGCAGTTTTCCAAGCGACACTGCTaGTACTTGAAATTTATCAATCTGTCCTCTTTGAAA +
Preference number: 6 (lower is better)
Translates to: QQHLLQFSKRHC*YLKFINLSSLK
Trigger: TTTCAAAGAGGACAGATTGATAAATTTCAAGTAGCAGCAGTGTCGCTTGGAAAACTGCAGAAGGTGCTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS CAA 90 bp GTGACAGTAGAGGATGCTTCTGAAGCTGGAGCCTCAGAAATATTTTaGTCAGTTCCAGAGTTATTACTTGAAAAATGGGTTGCATCTGCT +
Preference number: 6 (lower is better)
Translates to: VTVEDASEAGASEIF*SVPELLLEKWVASA
Trigger: AGCAGATGCAACCCATTTTTCAAGTAATAACTCTGGAACTGACAAAAATATTTCTGAGGCTCCAGCTTCAGAAGCATCCTCTACTGTCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS CAA 90 bp CCAATTCTGAAATGTTTCTTTCACTTGATGTCATGCTGTTGGTTATaGAGCCTGGTTCTTCAGAAGTCCGTGGTTCTTCCATATCAAAGG +
Preference number: 6 (lower is better)
Translates to: PILKCFFHLMSCCWL*SLVLQKSVVLPYQR
Trigger: CCTTTGATATGGAAGAACCACGGACTTCTGAAGAACCAGGCTCAATAACCAACAGCATGACATCAAGTGAAAGAAACATTTCAGAATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS CAA 90 bp AATCCTATGTTATATTCTTTCTCTTGGGTAAGTTCGCCACTGTCATaGGGATCATCACTGGATGTTTTATATGGCTGCTCACTGTCACTG +
Preference number: 6 (lower is better)
Translates to: NPMLYSFSWVSSPLS*GSSLDVLYGCSLSL
Trigger: CAGTGACAGTGAGCAGCCATATAAAACATCCAGTGATGATCCCAATGACAGTGGCGAACTTACCCAAGAGAAAGAATATAACATAGGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS CAA 90 bp AGCTTCCTGAAGTGTACCATGAATCATATTACTGCCAGGCAATGGTaGGTTTTTAATAGCATCATCAGAGACAGGGTAGACTTTGTTACC +
Preference number: 6 (lower is better)
Translates to: SFLKCTMNHITARQW*VFNSIIRDRVDFVT
Trigger: GGTAACAAAGTCTACCCTGTCTCTGATGATGCTATTAAAAACCAACCATTGCCTGGCAGTAATATGATTCATGGTACACTTCAGGAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS CAA 90 bp TGGCTGAGACCTGTAATTTCCAAAATGTTTGTAGAAACTCCTCAGTaGCTTCTAGAATATCTTAATGAAGAGAGCTGGAGCGTGGAAGAG +
Preference number: 6 (lower is better)
Translates to: WLRPVISKMFVETPQ*LLEYLNEESWSVEE
Trigger: CTCTTCCACGCTCCAGCTCTCTTCATTAAGATATTCTAGAAGCAACTGAGGAGTTTCTACAAACATTTTGGAAATTACAGGTCTCAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000636932.1
CDS CAA 90 bp AGAGATCCAACCTGTGTCTCATGGAGATCTTCTTCACCAGTGTCATaGGCAATAAAAGACTTATCTCCCTCTTTACATAGATTATCTCCT +
Preference number: 6 (lower is better)
Translates to: RDPTCVSWRSSSPVS*AIKDLSPSLHRLSP
Trigger: AGGAGATAATCTATGTAAAGAGGGAGATAAGTCTTTTATTGCCAATGACACTGGTGAAGAAGATCTCCATGAGACACAGGTTGGATCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS TCA 72 bp ATTACATATTGCAGAATGAAAGGGAACACCTGCAAGTaGACCTGGCATTTGAACAACTCCATTCTGAGTCTT +
Preference number: 6 (lower is better)
Translates to: ITYCRMKGNTCK*TWHLNNSILSL
Trigger: AAGACTCAGAATGGAGTTGTTCAAATGCCAGGTTCACTTGCAGGTGTTCCCTTTCATTCTGCAATATGTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS CCA 72 bp ACAGCACTAACATCACACTTATCTTGTCTTTCCTCCTaGAATTCCTGCAACATAGATGAACTACTAGATACC +
Preference number: 6 (lower is better)
Translates to: TALTSHLSCLSS*NSCNIDELLDT
Trigger: GGTATCTAGTAGTTCATCTATGTTGCAGGAATTCCAGGAGGAAAGACAAGATAAGTGTGATGTTAGTGCTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS CAA 72 bp GGAACAATTTGCAGAAAGATCTATTGGAACCATGTCTaGTTCTTTCTCACTGAGTCCAAAGTGGCTTGTAGT +
Preference number: 6 (lower is better)
Translates to: GTICRKIYWNHV*FFLTESKVACS
Trigger: ACTACAAGCCACTTTGGACTCAGTGAGAAAGAACAAGACATGGTTCCAATAGATCTTTCTGCAAATTGTTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS CAA 72 bp AATTCTGAAATGTTTCTTTCACTTGATGTCATGCTGTaGGTTATTGAGCCTGGTTCTTCAGAAGTCCGTGGT +
Preference number: 6 (lower is better)
Translates to: NSEMFLSLDVML*VIEPGSSEVRG
Trigger: ACCACGGACTTCTGAAGAACCAGGCTCAATAACCAACAGCATGACATCAAGTGAAAGAAACATTTCAGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS CAA 72 bp TTATATTCTTTCTCTTGGGTAAGTTCGCCACTGTCATaGGGATCATCACTGGATGTTTTATATGGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: LYSFSWVSSPLS*GSSLDVLYGCS
Trigger: TGAGCAGCCATATAAAACATCCAGTGATGATCCCAATGACAGTGGCGAACTTACCCAAGAGAAAGAATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS CAA 72 bp TTCCTCTATGTCTGTGAGGATTCTGCTATCATCATTTaGTTTTGTACCAGGTTCTACAATGTCACCCCTACA +
Preference number: 6 (lower is better)
Translates to: FLYVCEDSAIII*FCTRFYNVTPT
Trigger: TGTAGGGGTGACATTGTAGAACCTGGTACAAAACAAAATGATGATAGCAGAATCCTCACAGACATAGAGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS CAA 72 bp AAGTGTACCATGAATCATATTACTGCCAGGCAATGGTaGGTTTTTAATAGCATCATCAGAGACAGGGTAGAC +
Preference number: 6 (lower is better)
Translates to: KCTMNHITARQW*VFNSIIRDRVD
Trigger: GTCTACCCTGTCTCTGATGATGCTATTAAAAACCAACCATTGCCTGGCAGTAATATGATTCATGGTACACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS CAA 72 bp AGCAAACATTCTCATCCTTGGTATAAATCATTGGTTTaGCCTGCCCATCTGACTGAAGTCCAACAAACAATC +
Preference number: 6 (lower is better)
Translates to: SKHSHPWYKSLV*PAHLTEVQQTI
Trigger: GATTGTTTGTTGGACTTCAGTCAGATGGGCAGGCAAAACCAATGATTTATACCAAGGATGAGAATGTTTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS TCA 72 bp TTCCTCACAAAGTATCCCTCCTTTAAGGGGACTATCTaGATCTTGCACTATCATTTCCTTTGTAATTCTACC +
Preference number: 6 (lower is better)
Translates to: FLTKYPSFKGTI*ILHYHFLCNST
Trigger: GGTAGAATTACAAAGGAAATGATAGTGCAAGATTCAGATAGTCCCCTTAAAGGAGGGATACTTTGTGAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS TCA 72 bp TTCATTGTTTTTGGACTGATGAAGTCTTCGTTTTCCTaGATCACCTCTGGTACCGATGAGGTTGATAAATAC +
Preference number: 6 (lower is better)
Translates to: FIVFGLMKSSFS*ITSGTDEVDKY
Trigger: GTATTTATCAACCTCATCGGTACCAGAGGTGATTCAGGAAAACGAAGACTTCATCAGTCCAAAAACAATGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000637698.1
ENST00000650534.1
CDS TCA 72 bp AGGAGGATTGCAGCAGTTCAACTCTACAACAAAGGCTaGGAAGATCTTCACTTATTTGTTCATCAGGAAAAT +
Preference number: 6 (lower is better)
Translates to: RRIAAVQLYNKG*EDLHLFVHQEN
Trigger: ATTTTCCTGATGAACAAATAAGTGAAGATCTTCTCAGCCTTTGTTGTAGAGTTGAACTGCTGCAATCCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646684.1
CDS GCA 72 bp TACATGTCTCTTTTGGAGAATAAGCCTTATTTACAGTaGACATCTCACATGGAGAGCAAGTCACTTCCAAAA +
Preference number: 6 (lower is better)
Translates to: YMSLLENKPYLQ*TSHMESKSLPK
Trigger: TTTTGGAAGTGACTTGCTCTCCATGTGAGATGTGCACTGTAAATAAGGCTTATTCTCCAAAAGAGACATGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS GCA 72 bp ATTTCACCAATATCTTTGAGATTAATCTGGAGTGGATaGCTACAGATGTCCTGTACACCAGTAAAGAATGCA +
Preference number: 6 (lower is better)
Translates to: ISPISLRLIWSG*LQMSCTPVKNA
Trigger: TGCATTCTTTACTGGTGTACAGGACATCTGTAGGCATCCACTCCAGATTAATCTCAAAGATATTGGTGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650534.1
CDS CAA 72 bp GAGGATGCTTCTGAAGCTGGAGCCTCAGAAATATTTTaGTCAGTTCCAGAGTTATTACTTGAAAAATGGGTT +
Preference number: 6 (lower is better)
Translates to: EDASEAGASEIF*SVPELLLEKWV
Trigger: AACCCATTTTTCAAGTAATAACTCTGGAACTGACAAAAATATTTCTGAGGCTCCAGCTTCAGAAGCATCCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS TCA 72 bp TCGAGCCCCATCTGTTCCATAAAGATATATGGGGGCTaGACTTCTATGTTGTCCATACAGAATAATATAAAT +
Preference number: 6 (lower is better)
Translates to: SSPICSIKIYGG*TSMLSIQNNIN
Trigger: ATTTATATTATTCTGTATGGACAACATAGAAGTTCAGCCCCCATATATCTTTATGGAACAGATGGGGCTCGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS GCA 72 bp TCCAGAGTTGGTATGACCAATACGAATCTTAAAGAGTaGTCCAATGTCTCCAACTGTTATAGTAAATATGTC +
Preference number: 6 (lower is better)
Translates to: SRVGMTNTNLKE*SNVSNCYSKYV
Trigger: GACATATTTACTATAACAGTTGGAGACATTGGAGCACTCTTTAAGATTCGTATTGGTCATACCAACTCTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000636932.1
ENST00000637698.1
CDS CCA 72 bp ATAGATTTCACCAATATCTTTGAGATTAATCTGGAGTaGATGCCTACAGATGTCCTGTACACCAGTAAAGAA +
Preference number: 6 (lower is better)
Translates to: IDFTNIFEINLE*MPTDVLYTSKE
Trigger: TTCTTTACTGGTGTACAGGACATCTGTAGGCATCCACTCCAGATTAATCTCAAAGATATTGGTGAAATCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650534.1
CDS CAA 72 bp CTTATTAAGAATTCCTTTGGTTGCAAGCTGTCCATCTaGATACCTGGAATTTATTGCTTGCTGTCGAGATTT +
Preference number: 6 (lower is better)
Translates to: LIKNSFGCKLSI*IPGIYCLLSRF
Trigger: AAATCTCGACAGCAAGCAATAAATTCCAGGTATCAAGATGGACAGCTTGCAACCAAAGGAATTCTTAATAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS TCA 72 bp TTATTAAGAATTCCTTTGGTTGCAAGCTGTCCATCTTaGTACCTGGAATTTATTGCTTGCTGTCGAGATTTT +
Preference number: 6 (lower is better)
Translates to: LLRIPLVASCPS*YLEFIACCRDF
Trigger: AAAATCTCGACAGCAAGCAATAAATTCCAGGTATCAAGATGGACAGCTTGCAACCAAAGGAATTCTTAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220676.2
CDS CAA 72 bp AATGGTCACCTTCCAGTCTCCATCATTTGCTTCCTCTaGTATTTTAGGTTGATGATTTATTTGCATTTCTTG +
Preference number: 6 (lower is better)
Translates to: NGHLPVSIICFL*YFRLMIYLHFL
Trigger: CAAGAAATGCAAATAAATCATCAACCTAAAATACAAGAGGAAGCAAATGATGGAGACTGGAAGGTGACCATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000637698.1
CDS TCA 72 bp TGTCATAAACAAGCATGGACATTGCATTGGCTCTCATaGAAATCTCATTCTAAAACCTATCAAGATGGTTTT +
Preference number: 6 (lower is better)
Translates to: CHKQAWTLHWLS*KSHSKTYQDGF
Trigger: AAAACCATCTTGATAGGTTTTAGAATGAGATTTTCATGAGAGCCAATGCAATGTCCATGCTTGTTTATGACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646684.1