RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ROR2 (Homo sapiens)

Ensembl gene IDs: ENSG00000169071

Ensembl transcript IDs: ENST00000375708.4, ENST00000375715.5, ENST00000476440.1, ENST00000493846.1, ENST00000495386.5, ENST00000546883.1, ENST00000548585.2, ENST00000550066.5

Found 501 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGGATACACCGGGTGTGGGATTTACAAATAGGACCAACAATGTGTaGGGGGCACAGACGGCTGCCTGTGGGTCTGTGTGTAACAGGGGC +
Preference number: 1 (lower is better)
Translates to: LDTPGVGFTNRTNNV*GAQTAACGSVCNRG
Trigger: GCCCCTGTTACACACAGACCCACAGGCAGCCGTCTGTGCCCCGCACACATTGTTGGTCCTATTTGTAAATCCCACACCCGGTGTATCCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR CCA 90 bp GACCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTaGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCAGAAAT +
Preference number: 1 (lower is better)
Translates to: DPNRQQRAASVPANL*LLKGEYSQQGGSRN
Trigger: ATTTCTGCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR TCA 90 bp CACAGACGGCTGCCTGTGGGTCTGTGTGTAACAGGGGCTGTAAAATaGATGGACCTCATGTGCACGTGGTACAGAGAGAAGCAAACCAAG +
Preference number: 1 (lower is better)
Translates to: HRRLPVGLCVTGAVK*MDLMCTWYREKQTK
Trigger: CTTGGTTTGCTTCTCTCTGTACCACGTGCACATGAGGTCCATTCATTTTACAGCCCCTGTTACACACAGACCCACAGGCAGCCGTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR GCA 90 bp CCAGATCGGTTGTCAGGAACCTCAAGACCCGAGGTGCCTCCTCGCTaGCTTTTGCAGGCCCTTATTCCCAACGTTTTGAAATATTCACTC +
Preference number: 1 (lower is better)
Translates to: PDRLSGTSRPEVPPR*LLQALIPNVLKYSL
Trigger: GAGTGAATATTTCAAAACGTTGGGAATAAGGGCCTGCAAAAGGCAGCGAGGAGGCACCTCGGGTCTTGAGGTTCCTGACAACCGATCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR CCA 90 bp TTGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCAGAAATaGAGCCCCTTCATCCTCAAACCAACAGACCAGATCGGTTGTCAG +
Preference number: 1 (lower is better)
Translates to: LAAKGRIFSAGRQQK*SPFILKPTDQIGCQ
Trigger: CTGACAACCGATCTGGTCTGTTGGTTTGAGGATGAAGGGGCTCCATTTCTGCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR TCA 90 bp CCACAAATAGTGTTTAGAGATCCCAAATTAAATCTGCTGTTGATGTaGAGTGGCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCA +
Preference number: 1 (lower is better)
Translates to: PQIVFRDPKLNLLLM*SGQARGGVDRHSTA
Trigger: TGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGCCACTTCACATCAACAGCAGATTTAATTTGGGATCTCTAAACACTATTTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375715.5
3UTR-3UTR GCA 90 bp TTCCGACCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTCTCCCCAGGACGCCGTaGTGCCAGACCCCCTGCCTG +
Preference number: 2 (lower is better)
Translates to: FRPQQAAEGSLRSSESLALPRTP*CQTPCL
Trigger: CAGGCAGGGGGTCTGGCAGCACGGCGTCCTGGGGAG...AGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGGTCGGAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR-3UTR GCA 90 bp TCTTCCGACCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCCTCAAGACCCGAGGTaGCTCCTCGCTGCCTTTTGC +
Preference number: 2 (lower is better)
Translates to: SSDPNRQQRAASVPANLWPQDPR*LLAAFC
Trigger: GCAAAAGGCAGCGAGGAGGCACCTCGGGTCTTGAGG...CCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGGTCGGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR-3UTR GCA 90 bp TTCCGACCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTGAGGTGCCTCCTCGCTaGCTTTTGCAGGCCCTTATT +
Preference number: 2 (lower is better)
Translates to: FRPQQAAEGSLRSSESLAEVPPR*LLQALI
Trigger: AATAAGGGCCTGCAAAAGGCAGCGAGGAGGCACCTC...AGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGGTCGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR-3UTR GCA 90 bp CAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATTGCTGCCAGACCCCCTaGCTGGCTTGGGTGCTCCTA +
Preference number: 2 (lower is better)
Translates to: QQRAASVPANLWLLKGEYCCQTP*LAWVLL
Trigger: TAGGAGCACCCAAGCCAGGCAGGGGGTCTGGCAGCA...ATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR CAA 90 bp CGACCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTaGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCAGAAA +
Preference number: 2 (lower is better)
Translates to: RPQQAAEGSLRSSES*AAKGRIFSAGRQQK
Trigger: TTTCTGCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGGTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR-3UTR GCA 90 bp GTGGGATTTACAAATAGGACCAACAATGTGTGCGGGGCACAGACGGCTGCCTGTGATGACCATGTGTCCTaGTCCCCAGGACGCCGTGCT +
Preference number: 2 (lower is better)
Translates to: VGFTNRTNNVCGAQTAACDDHVS*SPGRRA
Trigger: AGCACGGCGTCCTGGGGAGCAGGACACATGGTCATC...ACAGGCAGCCGTCTGTGCCCCGCACACATTGTTGGTCCTATTTGTAAATCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR CAA 90 bp GCAGAAATGGAGCCCCTTCATCCTCAAACCAACAGACCAGATCGGTaGTCAGGAACCTCAAGACCCGAGGTGCCTCCTCGCTGCCTTTTG +
Preference number: 2 (lower is better)
Translates to: AEMEPLHPQTNRPDR*SGTSRPEVPPRCLL
Trigger: CAAAAGGCAGCGAGGAGGCACCTCGGGTCTTGAGGTTCCTGACAACCGATCTGGTCTGTTGGTTTGAGGATGAAGGGGCTCCATTTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR-3UTR CCA 90 bp CAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATTGCAAACAAGCCCACTaGCCGGCGGGCTCTTGTGAT +
Preference number: 2 (lower is better)
Translates to: QQRAASVPANLWLLKGEYCKQAH*PAGSCD
Trigger: ATCACAAGAGCCCGCCGGCCAGTGGGCTTGTTTGCA...ATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR-3UTR GCA 90 bp TGCACGTGGTACAGAGAGAAGCAAACCAAGACCAACTGGATCCCAACGTGGGTACTCCTCGCTGCCTTTTaGAGGCCCTTATTCCCAACG +
Preference number: 2 (lower is better)
Translates to: CTWYREKQTKTNWIPTWVLLAAF*RPLFPT
Trigger: CGTTGGGAATAAGGGCCTGCAAAAGGCAGCGAGGAG...TACCCACGTTGGGATCCAGTTGGTCTTGGTTTGCTTCTCTCTGTACCACGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR-3UTR GCA 90 bp ACATGGAGTGAAGCTGCCACCTATTTTCTTGAAAGGCATTTGCTGCTCACTACCCCACCTCACCCAGTCTaGAAACAAGCCCACTGGCCG +
Preference number: 2 (lower is better)
Translates to: TWSEAATYFLERHLLLTTPPHPV*KQAHWP
Trigger: CGGCCAGTGGGCTTGTTTGCAGACTGGGTGAGGTGG...GGTAGTGAGCAGCAAATGCCTTTCAAGAAAATAGGTGGCAGCTTCACTCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR-3UTR CCA 90 bp CCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTGCTAAAACTCCATATATGACATaGAGTGAAGCTGCCACCTAT +
Preference number: 2 (lower is better)
Translates to: PQQAAEGSLRSSESLAAKTPYMT*SEAATY
Trigger: ATAGGTGGCAGCTTCACTCCATGTCATATATGGAGT...TTTAGCAGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR-3UTR TCA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAACCTCTTCCAACCACATaGAGCCAGAATGGACATGAA +
Preference number: 2 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKPLPTT*SQNGHE
Trigger: TTCATGTCCATTCTGGCTTCATGTGGTTGGAAGAGG...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
3UTR CAA 90 bp CGGTTGTCAGGAACCTCAAGACCCGAGGTGCCTCCTCGCTGCCTTTaGCAGGCCCTTATTCCCAACGTTTTGAAATATTCACTCCATATA +
Preference number: 2 (lower is better)
Translates to: RLSGTSRPEVPPRCL*QALIPNVLKYSLHI
Trigger: TATATGGAGTGAATATTTCAAAACGTTGGGAATAAGGGCCTGCAAAAGGCAGCGAGGAGGCACCTCGGGTCTTGAGGTTCCTGACAACCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR-3UTR TCA 90 bp GAAGTGGCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCAAGCCAGAATGGACATaGAACTTCTTCCCATTTCAA +
Preference number: 2 (lower is better)
Translates to: EVAKLVVVLIGTQQHWGIKPEWT*NFFPFQ
Trigger: TTGAAATGGGAAGAAGTTTCATGTCCATTCTGGCTT...GATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGCCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
3UTR-3UTR TCA 90 bp TTGAAGGCACACATTTTGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTTGCTTCTCAAAGGTGACTaGGGTCCCTGTGGGGTCTCG +
Preference number: 2 (lower is better)
Translates to: LKAHILLYLRNSHFRSPLLLKGD*GPCGVS
Trigger: CGAGACCCCACAGGGACCTCAGTCACCTTTGAGAAG...CAAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR-3UTR TCA 90 bp CACTACCAGTCTACCACCAGAATCAATGTATACAGCCCTGGGGATGACCATGTGGGCTCTTGTGATTGCTaGGTATGGTGTCTTCTCAAA +
Preference number: 2 (lower is better)
Translates to: HYQSTTRINVYSPGDDHVGSCDC*VWCLLK
Trigger: TTTGAGAAGACACCATACTCAGCAATCACAAGAGCC...CACATGGTCATCCCCAGGGCTGTATACATTGATTCTGGTGGTAGACTGGTAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR-3UTR TCA 90 bp TTCATCCTCAAACCAACAGACCAGATCGGTTGTCAGGAACCTCAAGACCCGAGGTATTCACTCCATATATaGCATGGAGTGAAGCTGCCA +
Preference number: 2 (lower is better)
Translates to: FILKPTDQIGCQEPQDPRYSLHI*HGVKLP
Trigger: TGGCAGCTTCACTCCATGTCATATATGGAGTGAATA...CCTCGGGTCTTGAGGTTCCTGACAACCGATCTGGTCTGTTGGTTTGAGGATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR-3UTR TCA 90 bp GTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCATATATGACATGGAGTaGAGCTGCCACCTATTTTCT +
Preference number: 2 (lower is better)
Translates to: VPANLWLLKGEYSQQGGSIYDME*SCHLFS
Trigger: AGAAAATAGGTGGCAGCTTCACTCCATGTCATATAT...GCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR-3UTR GCA 90 bp GAAGGCACACATTTTGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTTGTCTTGAAAGGCATTTGCTaGTCACTACCAGTCTACCAC +
Preference number: 2 (lower is better)
Translates to: EGTHFVVSQELPFQKPLVLKGIC*SLPVYH
Trigger: GTGGTAGACTGGTAGTGAGCAGCAAATGCCTTTCAA...GACAAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR CAA 90 bp ATTTCACCAAATACAAAGCTGTCAGTTTCTTTGAAGGCACACATTTaGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTTGTCTTCC +
Preference number: 2 (lower is better)
Translates to: ISPNTKLSVSLKAHI*LYLRNSHFRSPLSS
Trigger: GGAAGACAAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTCAAAGAAACTGACAGCTTTGTATTTGGTGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR GCA 72 bp GACCAGATCGGTTGTCAGGAACCTCAAGACCCGAGGTaGCTCCTCGCTGCCTTTTGCAGGCCCTTATTCCCA +
Preference number: 3 (lower is better)
Translates to: DQIGCQEPQDPR*LLAAFCRPLFP
Trigger: TGGGAATAAGGGCCTGCAAAAGGCAGCGAGGAGGCACCTCGGGTCTTGAGGTTCCTGACAACCGATCTGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR CCA 72 bp AGGCAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTaGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGC +
Preference number: 3 (lower is better)
Translates to: RQQRAASVPANL*LLKGEYSQQGG
Trigger: GCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR GCA 72 bp TTGTCAGGAACCTCAAGACCCGAGGTGCCTCCTCGCTaGCTTTTGCAGGCCCTTATTCCCAACGTTTTGAAA +
Preference number: 3 (lower is better)
Translates to: LSGTSRPEVPPR*LLQALIPNVLK
Trigger: TTTCAAAACGTTGGGAATAAGGGCCTGCAAAAGGCAGCGAGGAGGCACCTCGGGTCTTGAGGTTCCTGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR TCA 72 bp CTGCCTGTGGGTCTGTGTGTAACAGGGGCTGTAAAATaGATGGACCTCATGTGCACGTGGTACAGAGAGAAG +
Preference number: 3 (lower is better)
Translates to: LPVGLCVTGAVK*MDLMCTWYREK
Trigger: CTTCTCTCTGTACCACGTGCACATGAGGTCCATTCATTTTACAGCCCCTGTTACACACAGACCCACAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR-3UTR CAA 90 bp TTGAAGGCACACATTTTGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTTGCCTCCTCGCTGCCTTTaGCAGGCCCTTATTCCCAAC +
Preference number: 3 (lower is better)
Translates to: LKAHILLYLRNSHFRSPLPPRCL*QALIPN
Trigger: GTTGGGAATAAGGGCCTGCAAAAGGCAGCGAGGAGG...CAAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR CCA 72 bp AAAGGGAGAATATTCTCAGCAGGGAGGCAGCAGAAATaGAGCCCCTTCATCCTCAAACCAACAGACCAGATC +
Preference number: 3 (lower is better)
Translates to: KGRIFSAGRQQK*SPFILKPTDQI
Trigger: GATCTGGTCTGTTGGTTTGAGGATGAAGGGGCTCCATTTCTGCTGCCTCCCTGCTGAGAATATTCTCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR-3UTR CAA 90 bp GTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCCTGCCACCTATTTTCTaGAAAGGCATTTGCTGCTCA +
Preference number: 3 (lower is better)
Translates to: VPANLWLLKGEYSQQGGSLPPIF*KGICCS
Trigger: TGAGCAGCAAATGCCTTTCAAGAAAATAGGTGGCAG...GCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR-3UTR CAA 90 bp GTGGGATTTACAAATAGGACCAACAATGTGTGCGGGGCACAGACGGCTGCCTGTTTGAAGGCACACATTTaGTTGTATCTCAGGAACTCC +
Preference number: 3 (lower is better)
Translates to: VGFTNRTNNVCGAQTAACLKAHI*LYLRNS
Trigger: GGAGTTCCTGAGATACAACAAAATGTGTGCCTTCAA...ACAGGCAGCCGTCTGTGCCCCGCACACATTGTTGGTCCTATTTGTAAATCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR CCA 72 bp AAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTaGGGCATCCATAAAAATATTCATGGGGCTTCCTCT +
Preference number: 3 (lower is better)
Translates to: KLVVVLIGTQQH*GIHKNIHGASS
Trigger: AGAGGAAGCCCCATGAATATTTTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375715.5
3UTR-3UTR CAA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAAAATGCTGAATCTATTTaGTTCATGAGTCTGAGTGCT +
Preference number: 3 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKNAESI*FMSLSA
Trigger: AGCACTCAGACTCATGAACAAAATAGATTCAGCATT...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375715.5
3UTR GCA 72 bp GTGAAGCTGCCACCTATTTTCTTGAAAGGCATTTGCTaGTCACTACCAGTCTACCACCAGAATCAATGTATA +
Preference number: 3 (lower is better)
Translates to: VKLPPIFLKGIC*SLPVYHQNQCI
Trigger: TATACATTGATTCTGGTGGTAGACTGGTAGTGAGCAGCAAATGCCTTTCAAGAAAATAGGTGGCAGCTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR TCA 72 bp ATAAAAATATTCATGGGGCTTCCTCTTCCAACCACATaGAGCCAGAATGGACATGAAACTTCTTCCCATTTC +
Preference number: 3 (lower is better)
Translates to: IKIFMGLPLPTT*SQNGHETSSHF
Trigger: GAAATGGGAAGAAGTTTCATGTCCATTCTGGCTTCATGTGGTTGGAAGAGGAAGCCCCATGAATATTTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375715.5
3UTR TCA 72 bp AAACCATTTCACCAAATACAAAGCTGTCAGTTTCTTTaGAGGCACACATTTTGTTGTATCTCAGGAACTCCC +
Preference number: 3 (lower is better)
Translates to: KPFHQIQSCQFL*RHTFCCISGTP
Trigger: GGGAGTTCCTGAGATACAACAAAATGTGTGCCTTCAAAGAAACTGACAGCTTTGTATTTGGTGAAATGGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR TCA 72 bp ATAACAATACCGTGTTCTGTACAATACTGCTTCCTCTaGACATTCCAAACCCAAGAAACACTTTCCCTTGAA +
Preference number: 3 (lower is better)
Translates to: ITIPCSVQYCFL*TFQTQETLSLE
Trigger: TTCAAGGGAAAGTGTTTCTTGGGTTTGGAATGTTCAGAGGAAGCAGTATTGTACAGAACACGGTATTGTTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR CCA 72 bp TCCCAACGTTTTGAAATATTCACTCCATATATGACATaGAGTGAAGCTGCCACCTATTTTCTTGAAAGGCAT +
Preference number: 3 (lower is better)
Translates to: SQRFEIFTPYMT*SEAATYFLERH
Trigger: ATGCCTTTCAAGAAAATAGGTGGCAGCTTCACTCCATGTCATATATGGAGTGAATATTTCAAAACGTTGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp GGAGCAGGGCTCCACCTCACCCAGTCTGCAAACAAGCCCACTGGCCGGCGGGCTTGGCTGTGGGGGTGCTaGAGGGCCCACGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: GAGLHLTQSANKPTGRRAWLWGC*RAHGWH
Trigger: GTGCCAGCCGTGGGCCCTGCAGCACCCCCACAGCCA...AGCCCGCCGGCCAGTGGGCTTGTTTGCAGACTGGGTGAGGTGGAGCCCTGCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GGAGCAGGGCTCCACCTCACCCAGTCTGCAAACAAGCCCACTGGCCGGCGGGCTGGCCACGGCAAGGGCTaGCTGGGGAGGTTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: GAGLHLTQSANKPTGRRAGHGKG*LGRFLG
Trigger: GCCAAGGAACCTCCCCAGCCAGCCCTTGCCGTGGCC...AGCCCGCCGGCCAGTGGGCTTGTTTGCAGACTGGGTGAGGTGGAGCCCTGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp GGAGCAGGGCTCCACCTCACCCAGTCTGCAAACAAGCCCACTGGCCGGCGGGCTTGGTCTGCGTGGTGTTaGTGGCCCCCGAGGTCTGCG +
Preference number: 4 (lower is better)
Translates to: GAGLHLTQSANKPTGRRAWSAWC*WPPRSA
Trigger: CGCAGACCTCGGGGGCCAGCAACACCACGCAGACCA...AGCCCGCCGGCCAGTGGGCTTGTTTGCAGACTGGGTGAGGTGGAGCCCTGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp AAGCCCCTTGTCTTCCGACCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCCTCCCCAGGACGCCGTaGTGCCAGACCCCCTGCCTG +
Preference number: 4 (lower is better)
Translates to: KPLVFRPQQAAEGSLRSSLPRTP*CQTPCL
Trigger: CAGGCAGGGGGTCTGGCAGCACGGCGTCCTGGGGAG...GCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGGTCGGAAGACAAGGGGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp AAGCCCCTTGTCTTCCGACCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCGCGGGGCCTTCTGCTTaGGCCCCACGTAGCGGGCGT +
Preference number: 4 (lower is better)
Translates to: KPLVFRPQQAAEGSLRSSAGPSA*APRSGR
Trigger: ACGCCCGCTACGTGGGGCCCAAGCAGAAGGCCCCGC...GCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGGTCGGAAGACAAGGGGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp GGAGCAGGGCTCCACCTCACCCAGTCTGCAAACAAGCCCACTGGCCGGCGGGCTGGGGCACCATGGGTCTaGTCTGGCCCTTCATGGGGA +
Preference number: 4 (lower is better)
Translates to: GAGLHLTQSANKPTGRRAGAPWV*SGPSWG
Trigger: TCCCCATGAAGGGCCAGATCAGACCCATGGTGCCCC...AGCCCGCCGGCCAGTGGGCTTGTTTGCAGACTGGGTGAGGTGGAGCCCTGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp GGAGCAGGGCTCCACCTCACCCAGTCTGCAAACAAGCCCACTGGCCGGCGGGCTAACCCCGGGCCCTGGTaGCACTCAAGCTTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GAGLHLTQSANKPTGRRANPGPW*HSSFQL
Trigger: CAGCTGGAAGCTTGAGTGGCACCAGGGCCCGGGGTT...AGCCCGCCGGCCAGTGGGCTTGTTTGCAGACTGGGTGAGGTGGAGCCCTGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp GGAGCAGGGCTCCACCTCACCCAGTCTGCAAACAAGCCCACTGGCCGGCGGGCTAGTGCGGCGAGCGCATaGCCAGGAATTCGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: GAGLHLTQSANKPTGRRASAASA*PGIRGG
Trigger: ACCTCCACGAATTCCTGGTCATGCGCTCGCCGCACT...AGCCCGCCGGCCAGTGGGCTTGTTTGCAGACTGGGTGAGGTGGAGCCCTGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GGAGCAGGGCTCCACCTCACCCAGTCTGCAAACAAGCCCACTGGCCGGCGGGCTATCATGCTCAGGGGCTaGTCCTTGGTCACCACGCCC +
Preference number: 4 (lower is better)
Translates to: GAGLHLTQSANKPTGRRAIMLRG*SLVTTP
Trigger: GGGCGTGGTGACCAAGGACCAGCCCCTGAGCATGAT...AGCCCGCCGGCCAGTGGGCTTGTTTGCAGACTGGGTGAGGTGGAGCCCTGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp AAGCCCCTTGTCTTCCGACCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCCTGGCACTGGTGGCCTaGCTTGGTGGTGCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: KPLVFRPQQAAEGSLRSSLALVA*LGGACR
Trigger: ACGGCAAGCACCACCAAGTCAGGCCACCAGTGCCAG...GCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGGTCGGAAGACAAGGGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp GGAGCAGGGCTCCACCTCACCCAGTCTGCAAACAAGCCCACTGGCCGGCGGGCTGCTCAGGGAAGTCTGTaGTGGACAGGTGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: GAGLHLTQSANKPTGRRAAQGSL*WTGGGC
Trigger: ACAGCCACCACCTGTCCAGCACAGACTTCCCTGAGC...AGCCCGCCGGCCAGTGGGCTTGTTTGCAGACTGGGTGAGGTGGAGCCCTGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp GGAGCAGGGCTCCACCTCACCCAGTCTGCAAACAAGCCCACTGGCCGGCGGGCTCACCCCTTTCTACGATaGGTCCGCTCCTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GAGLHLTQSANKPTGRRAHPFLR*VRSSFS
Trigger: GGAGAAGGAGGAGCGGACGCATCGTAGAAAGGGGTG...AGCCCGCCGGCCAGTGGGCTTGTTTGCAGACTGGGTGAGGTGGAGCCCTGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp AAGCCCCTTGTCTTCCGACCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCGCAGGCAGACGACGTTaGGGTGTTGCAGCCGTGCTC +
Preference number: 4 (lower is better)
Translates to: KPLVFRPQQAAEGSLRSSAGRRR*GVAAVL
Trigger: GAGCACGGCTGCAACACCCCAACGTCGTCTGCCTGC...GCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGGTCGGAAGACAAGGGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp ACAGACCAGATCGGTTGTCAGGAACCTCAAGACCCGAGGTGCCTCCTCGCTGCCACGGCAAGGGCTGGCTaGGGAGGTTCCTTGGCGCGG +
Preference number: 4 (lower is better)
Translates to: TDQIGCQEPQDPRCLLAATARAG*GGSLAR
Trigger: CCGCGCCAAGGAACCTCCCCAGCCAGCCCTTGCCGT...GGCAGCGAGGAGGCACCTCGGGTCTTGAGGTTCCTGACAACCGATCTGGTCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp GGAGCAGGGCTCCACCTCACCCAGTCTGCAAACAAGCCCACTGGCCGGCGGGCTGGCCTGACTTGGTGGTaGTTGCCGTTCCTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: GAGLHLTQSANKPTGRRAGLTWW*LPFLCN
Trigger: ATTACAGAGGAACGGCAAGCACCACCAAGTCAGGCC...AGCCCGCCGGCCAGTGGGCTTGTTTGCAGACTGGGTGAGGTGGAGCCCTGCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp AAGCCCCTTGTCTTCCGACCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCACTGGTGGCCTGACTTaGTGGTGCTTGCCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: KPLVFRPQQAAEGSLRSSTGGLT*WCLPFL
Trigger: GAGGAACGGCAAGCACCACCAAGTCAGGCCACCAGT...GCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGGTCGGAAGACAAGGGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp CAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATGCTGGGGAGGTTCCTTaGCGCGGGCTGGGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: QQRAASVPANLWLLKGEYAGEVP*RGLGRP
Trigger: GGGACGCCCCAGCCCGCGCCAAGGAACCTCCCCAGC...ATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp TTCCGACCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTGCTCCTCCTTCTCCCTaGCGCTTCGCAAACGGGTCC +
Preference number: 4 (lower is better)
Translates to: FRPQQAAEGSLRSSESLAAPPSP*RFANGS
Trigger: GGACCCGTTTGCGAAGCGCCAGGGAGAAGGAGGAGC...AGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGGTCGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp TCTTCCGACCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTGCCCTGTCTGCCATaGATGTGTTGGAGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: SSDPNRQQRAASVPANLWLPCLP*MCWRGP
Trigger: CGGCCCCCTCCAACACATCCATGGCAGACAGGGCAG...CCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGGTCGGAAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp CAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATGGCTGTGGATGTCCTTaGAGCGGGGCCGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: QQRAASVPANLWLLKGEYGCGCP*SGAAGW
Trigger: CCAGCCGGCGGCCCCGCTTCAAGGACATCCACAGCC...ATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp ACAGACCAGATCGGTTGTCAGGAACCTCAAGACCCGAGGTGCCTCCTCGCTGCCCGGCTGGGATGCCAATaGGCATGCAGTTGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: TDQIGCQEPQDPRCLLAARLGCQ*ACSWQR
Trigger: ACGCTGCCAACTGCATGCGCATTGGCATCCCAGCCG...GGCAGCGAGGAGGCACCTCGGGTCTTGAGGTTCCTGACAACCGATCTGGTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp TTCCGACCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTGCCTCTCGGCTGGGATaGCAATGCGCATGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: FRPQQAAEGSLRSSESLAASRLG*QCACSW
Trigger: CCAACTGCATGCGCATTGGCATCCCAGCCGAGAGGC...AGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGGTCGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp ACAGACCAGATCGGTTGTCAGGAACCTCAAGACCCGAGGTGCCTCCTCGCTGCCTGTAGTTGGAAAGGTTaGCCCAGGCTCGGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: TDQIGCQEPQDPRCLLAACSWKG*PRLGAG
Trigger: GCCGGCTCCGAGCCTGGGGCAACCTTTCCAACTACA...GGCAGCGAGGAGGCACCTCGGGTCTTGAGGTTCCTGACAACCGATCTGGTCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp AAGCCCCTTGTCTTCCGACCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCGGCAGAAGGATGGGATaGCGAACTGTGAGCACTGGT +
Preference number: 4 (lower is better)
Translates to: KPLVFRPQQAAEGSLRSSGRRMG*RTVSTG
Trigger: ACCAGTGCTCACAGTTCGCCATCCCATCCTTCTGCC...GCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGGTCGGAAGACAAGGGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp TCTTCCGACCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCACGGCTGGCACTGGTaGCCTGACTTGGTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: SSDPNRQQRAASVPANLWHGWHW*PDLVVL
Trigger: AAGCACCACCAAGTCAGGCCACCAGTGCCAGCCGTG...CCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGGTCGGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp CCTCAAACCAACAGACCAGATCGGTTGTCAGGAACCTCAAGACCCGAGGTGCCTAGCGGGGCCGCCGGCTaGGGAACTCGTTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: PQTNRPDRLSGTSRPEVPSGAAG*GTRSST
Trigger: AGTGCTGGAACGAGTTCCCCAGCCGGCGGCCCCGCT...AGGCACCTCGGGTCTTGAGGTTCCTGACAACCGATCTGGTCTGTTGGTTTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp TCTTCCGACCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGTGGTGCTCAGGGAGCTaGTCTGCGTGGTGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: SSDPNRQQRAASVPANLWWCSGS*SAWCCW
Trigger: CCAGCAACACCACGCAGACCAGCTCCCTGAGCACCA...CCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGGTCGGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GGAGCAGGGCTCCACCTCACCCAGTCTGCAAACAAGCCCACTGGCCGGCGGGCTGACCTCATGTGCACGTaGTACAGAGAGAAGCAAACC +
Preference number: 4 (lower is better)
Translates to: GAGLHLTQSANKPTGRRADLMCT*YREKQT
Trigger: GGTTTGCTTCTCTCTGTACCACGTGCACATGAGGTC...AGCCCGCCGGCCAGTGGGCTTGTTTGCAGACTGGGTGAGGTGGAGCCCTGCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp TTCCGACCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTGGAATCGGGCCGTCCTaGCCATCAAGGGGTCCTAAA +
Preference number: 4 (lower is better)
Translates to: FRPQQAAEGSLRSSESLAGIGPS*PSRGPK
Trigger: TTTAGGACCCCTTGATGGGCAGGACGGCCCGATTCC...AGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGGTCGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp GAAGTGGCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCGGATGCCAATGCGCATaGAGTTGGCAGCGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: EVAKLVVVLIGTQQHWGIGCQCA*SWQRRG
Trigger: GCCCCGACGCTGCCAACTGCATGCGCATTGGCATCC...GATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGCCACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp AAGCCCCTTGTCTTCCGACCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCACAGAATCCCCATCTTaGTGCTGTCTCGGGGACTAC +
Preference number: 4 (lower is better)
Translates to: KPLVFRPQQAAEGSLRSSTESPS*CCLGDY
Trigger: GTAGTCCCCGAGACAGCAGCAAGATGGGGATTCTGT...GCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGGTCGGAAGACAAGGGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp TCTTCCGACCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGGCGAACTGTGAGCACTaGTCCGACAGGTGCGTAGAC +
Preference number: 4 (lower is better)
Translates to: SSDPNRQQRAASVPANLWANCEH*SDRCVD
Trigger: GTCTACGCACCTGTCGGACCAGTGCTCACAGTTCGC...CCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGGTCGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GAAGTGGCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCGCCCAGCCTCTCGGCTaGGATGCCAATGCGCATGCA +
Preference number: 4 (lower is better)
Translates to: EVAKLVVVLIGTQQHWGIAQPLG*DANAHA
Trigger: TGCATGCGCATTGGCATCCCAGCCGAGAGGCTGGGC...GATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGCCACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp CCTCAAACCAACAGACCAGATCGGTTGTCAGGAACCTCAAGACCCGAGGTGCCTGTGCTGGACAGGTGGTaGCTGTGGGGGTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PQTNRPDRLSGTSRPEVPVLDRW*LWGCCR
Trigger: CCTGCAGCACCCCCACAGCCACCACCTGTCCAGCAC...AGGCACCTCGGGTCTTGAGGTTCCTGACAACCGATCTGGTCTGTTGGTTTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GAAGTGGCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCGTCGCCGCTGCGGTGTaGACGCAGATGCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: EVAKLVVVLIGTQQHWGIVAAAV*TQMPSA
Trigger: AGCAGAAGGCATCTGCGTCCACACCGCAGCGGCGAC...GATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGCCACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAAAGCGGGGCCGCCGGCTaGGGAACTCGTTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKSGAAG*GTRSST
Trigger: AGTGCTGGAACGAGTTCCCCAGCCGGCGGCCCCGCT...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp TTCCGACCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTACTCAAGCTTCCAGCTaGACTTGGGCCTCGTCCACC +
Preference number: 4 (lower is better)
Translates to: FRPQQAAEGSLRSSESLATQASS*TWASST
Trigger: GGTGGACGAGGCCCAAGTCCAGCTGGAAGCTTGAGT...AGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGGTCGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp ACAGACCAGATCGGTTGTCAGGAACCTCAAGACCCGAGGTGCCTCCTCGCTGCCTGTCCTTCAGCGTTTTaGTGGCCACAGCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: TDQIGCQEPQDPRCLLAACPSAF*WPQPGS
Trigger: AGACCCAGGCTGTGGCCATCAAAACGCTGAAGGACA...GGCAGCGAGGAGGCACCTCGGGTCTTGAGGTTCCTGACAACCGATCTGGTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp TTCCGACCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTCGTGCGAACAGTAGCTaGAGATCATGCTCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: FRPQQAAEGSLRSSESLARANSS*RSCSGA
Trigger: AGCCCCTGAGCATGATCTTCAGCTACTGTTCGCACG...AGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGGTCGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp GAAGTGGCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCAGTGCGGCGAGCGCATaGCCAGGAATTCGTGGAGGT +
Preference number: 4 (lower is better)
Translates to: EVAKLVVVLIGTQQHWGISAASA*PGIRGG
Trigger: ACCTCCACGAATTCCTGGTCATGCGCTCGCCGCACT...GATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGCCACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR TCA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTGGCTGTGGATGTCCTTaGAGCGGGGCCGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: GNAESILFMSLSALGPGSGCGCP*SGAAGW
Trigger: CCAGCCGGCGGCCCCGCTTCAAGGACATCCACAGCC...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR TCA 90 bp CCTCAAACCAACAGACCAGATCGGTTGTCAGGAACCTCAAGACCCGAGGTGCCTGGCCCTTCATGGGGATaGACTGGGGCTGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: PQTNRPDRLSGTSRPEVPGPSWG*TGAVGR
Trigger: CCTTCCCACAGCCCCAGTTCATCCCCATGAAGGGCC...AGGCACCTCGGGTCTTGAGGTTCCTGACAACCGATCTGGTCTGTTGGTTTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp GTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCGGCTTGGGGACCATCTaGGGAGGCACCTGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: VPANLWLLKGEYSQQGGSGLGTI*GGTCCG
Trigger: CCCGCAGCAGGTGCCTCCTCAGATGGTCCCCAAGCC...GCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp GAAGTGGCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCTGTAGTTGGAAAGGTTaGCCCAGGCTCGGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: EVAKLVVVLIGTQQHWGICSWKG*PRLGAG
Trigger: GCCGGCTCCGAGCCTGGGGCAACCTTTCCAACTACA...GATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGCCACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp CCTCAAACCAACAGACCAGATCGGTTGTCAGGAACCTCAAGACCCGAGGTGCCTGCGATGGTGTACTCCTaGCGGCACAGGTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: PQTNRPDRLSGTSRPEVPAMVYS*RHRSLS
Trigger: GGAGAGCGACCTGTGCCGCCAGGAGTACACCATCGC...AGGCACCTCGGGTCTTGAGGTTCCTGACAACCGATCTGGTCTGTTGGTTTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GAAGTGGCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCAATGCGCATGCAGTTaGCAGCGTCGGGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: EVAKLVVVLIGTQQHWGIQCACS*QRRGSQ
Trigger: CTGAGAGCCCCGACGCTGCCAACTGCATGCGCATTG...GATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGCCACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp CAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATTCAGGGGCTGGTCCTTaGTCACCACGCCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: QQRAASVPANLWLLKGEYSGAGP*SPRPAG
Trigger: GCCTGCTGGGCGTGGTGACCAAGGACCAGCCCCTGA...ATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAATCAGGGGCTGGTCCTTaGTCACCACGCCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKSGAGP*SPRPAG
Trigger: GCCTGCTGGGCGTGGTGACCAAGGACCAGCCCCTGA...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp TGCACGTGGTACAGAGAGAAGCAAACCAAGACCAACTGGATCCCAACGTGGGTATCTGCGTGGTGTTGCTaGCCCCCGAGGTCTGCGCCG +
Preference number: 4 (lower is better)
Translates to: CTWYREKQTKTNWIPTWVSAWCC*PPRSAP
Trigger: CGGCGCAGACCTCGGGGGCCAGCAACACCACGCAGA...TACCCACGTTGGGATCCAGTTGGTCTTGGTTTGCTTCTCTCTGTACCACGTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCGGGAGCTGGTCTGCGTaGTGTTGCTGGCCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: VPANLWLLKGEYSQQGGSGSWSA*CCWPPR
Trigger: CCTCGGGGGCCAGCAACACCACGCAGACCAGCTCCC...GCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp TGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCAGAAATGGAGCCCCTTCCTGCACGGTGCTCTaGGCCCCATCTTCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: WLLKGEYSQQGGSRNGAPSCTVL*APSSGA
Trigger: CGCCCCAGAAGATGGGGCCCAGAGCACCGTGCAGGA...AGGGGCTCCATTTCTGCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp GAAGTGGCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCAGAACTTGCCGTACATaGTGGCCTCTGGGGCCATCC +
Preference number: 4 (lower is better)
Translates to: EVAKLVVVLIGTQQHWGIRTCRT*WPLGPS
Trigger: GGATGGCCCCAGAGGCCATCATGTACGGCAAGTTCT...GATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGCCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR TCA 90 bp CATTTGCTGCTCACTACCAGTCTACCACCAGAATCAATGTATACAGCCCTGGGGCCGGCTGGTAGCCGTTaGCGGGGACGTAGAGCTGCG +
Preference number: 4 (lower is better)
Translates to: HLLLTTSLPPESMYTALGPAGSR*RGRRAA
Trigger: CGCAGCTCTACGTCCCCGTCAACGGCTACCAGCCGG...CCCCAGGGCTGTATACATTGATTCTGGTGGTAGACTGGTAGTGAGCAGCAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp CATTTGCTGCTCACTACCAGTCTACCACCAGAATCAATGTATACAGCCCTGGGGTGGAGGGGGCCGTGGTaGCGTAGCCTGTGCTGGTGG +
Preference number: 4 (lower is better)
Translates to: HLLLTTSLPPESMYTALGWRGPW*RSLCWW
Trigger: CCACCAGCACAGGCTACGTCACCACGGCCCCCTCCA...CCCCAGGGCTGTATACATTGATTCTGGTGGTAGACTGGTAGTGAGCAGCAAATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp GTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCATCCGCCGCGGCTCCTaGACCACCGGGGCATCATTC +
Preference number: 4 (lower is better)
Translates to: VPANLWLLKGEYSQQGGSIRRGS*TTGASF
Trigger: GAATGATGCCCCGGTGGTGCAGGAGCCGCGGCGGAT...GCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTCTGCCCACGTCCGAGTaGGGCGAGCGCATGACCAGG +
Preference number: 4 (lower is better)
Translates to: GNAESILFMSLSALGPGSLPTSE*GERMTR
Trigger: CCTGGTCATGCGCTCGCCGCACTCGGACGTGGGCAG...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAAGGGCAAGGCAGCACCTaGCGGTTCCGGATCATCTCC +
Preference number: 4 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKGQGST*RFRIIS
Trigger: GGAGATGATCCGGAACCGGCAGGTGCTGCCTTGCCC...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp CCTCAAACCAACAGACCAGATCGGTTGTCAGGAACCTCAAGACCCGAGGTGCCTTGCTGGTGGAGCCACTaGCACTGTGGTGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PQTNRPDRLSGTSRPEVPCWWSH*HCGVSW
Trigger: CCAGCTCACACCACAGTGGCAGTGGCTCCACCAGCA...AGGCACCTCGGGTCTTGAGGTTCCTGACAACCGATCTGGTCTGTTGGTTTGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCCGGGGCTCTCAGGCATaGGCAGCGCCTCACACTTGG +
Preference number: 4 (lower is better)
Translates to: VPANLWLLKGEYSQQGGSRGSQA*AAPHTW
Trigger: CCAAGTGTGAGGCGCTGCCCATGCCTGAGAGCCCCG...GCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GTGGGATTTACAAATAGGACCAACAATGTGTGCGGGGCACAGACGGCTGCCTGTGCCCAGCCTCTCGGCTaGGATGCCAATGCGCATGCA +
Preference number: 4 (lower is better)
Translates to: VGFTNRTNNVCGAQTAACAQPLG*DANAHA
Trigger: TGCATGCGCATTGGCATCCCAGCCGAGAGGCTGGGC...ACAGGCAGCCGTCTGTGCCCCGCACACATTGTTGGTCCTATTTGTAAATCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GAAGTGGCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCGGTGGCCTGACTTGGTaGTGCTTGCCGTTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: EVAKLVVVLIGTQQHWGIGGLTW*CLPFLC
Trigger: ACAGAGGAACGGCAAGCACCACCAAGTCAGGCCACC...GATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGCCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp GAAGTGGCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCACTGGTGGCCTGACTTaGTGGTGCTTGCCGTTCCTC +
Preference number: 4 (lower is better)
Translates to: EVAKLVVVLIGTQQHWGITGGLT*WCLPFL
Trigger: GAGGAACGGCAAGCACCACCAAGTCAGGCCACCAGT...GATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGCCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp GAAGTGGCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCGGCATTTCCATGTCTTaGCTGGGCGAGGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: EVAKLVVVLIGTQQHWGIGISMS*LGEAIS
Trigger: GCTGATGGCCTCGCCCAGCCAAGACATGGAAATGCC...GATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGCCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAAGCAGGCAGACGACGTTaGGGTGTTGCAGCCGTGCTC +
Preference number: 4 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKAGRRR*GVAAVL
Trigger: GAGCACGGCTGCAACACCCCAACGTCGTCTGCCTGC...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp GAAGTGGCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCGAACCACGTGGTGGCTaGATAGGTACTCCATCCCCG +
Preference number: 4 (lower is better)
Translates to: EVAKLVVVLIGTQQHWGIEPRGG*IGTPSP
Trigger: CGGGGATGGAGTACCTATCCAGCCACCACGTGGTTC...GATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGCCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375715.5
3UTR CAA 72 bp GAGCCCCTTCATCCTCAAACCAACAGACCAGATCGGTaGTCAGGAACCTCAAGACCCGAGGTGCCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: EPLHPQTNRPDR*SGTSRPEVPPR
Trigger: GCGAGGAGGCACCTCGGGTCTTGAGGTTCCTGACAACCGATCTGGTCTGTTGGTTTGAGGATGAAGGGGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp TTCCGACCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTAGAAAAGGCAAGCGATaGCCAGTGGAATTGCGATGC +
Preference number: 4 (lower is better)
Translates to: FRPQQAAEGSLRSSESLARKGKR*PVELRC
Trigger: GCATCGCAATTCCACTGGTCATCGCTTGCCTTTTCT...AGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGGTCGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp GAAGTGGCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCGTGCGAACAGTAGCTaGAGATCATGCTCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: EVAKLVVVLIGTQQHWGIRANSS*RSCSGA
Trigger: AGCCCCTGAGCATGATCTTCAGCTACTGTTCGCACG...GATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGCCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR TCA 90 bp CCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTGCTAAAGTAGGACCAGATGTCTaGGTCGATGGAGAACTTGCC +
Preference number: 4 (lower is better)
Translates to: PQQAAEGSLRSSESLAAKVGPDV*VDGELA
Trigger: GGCAAGTTCTCCATCGACTCAGACATCTGGTCCTAC...TTTAGCAGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp CAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATATACAGCCCTGGGGATaGCCATGTGTCCTGCTCCCC +
Preference number: 4 (lower is better)
Translates to: QQRAASVPANLWLLKGEYIQPWG*PCVLLP
Trigger: GGGGAGCAGGACACATGGTCATCCCCAGGGCTGTAT...ATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTATCCGCCGCGGCTCCTaGACCACCGGGGCATCATTC +
Preference number: 4 (lower is better)
Translates to: GNAESILFMSLSALGPGSIRRGS*TTGASF
Trigger: GAATGATGCCCCGGTGGTGCAGGAGCCGCGGCGGAT...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAACGGCTGGGATGCCAATaGGCATGCAGTTGGCAGCGT +
Preference number: 4 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKRLGCQ*ACSWQR
Trigger: ACGCTGCCAACTGCATGCGCATTGGCATCCCAGCCG...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAAGCCTCTCGGCTGGGATaGCAATGCGCATGCAGTTGG +
Preference number: 4 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKASRLG*QCACSW
Trigger: CCAACTGCATGCGCATTGGCATCCCAGCCGAGAGGC...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAAGGGGTGTTGCAGCCGTaGTCGCAGCATAGCCTCATG +
Preference number: 4 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKGVLQP*SQHSLM
Trigger: CATGAGGCTATGCTGCGAGCACGGCTGCAACACCCC...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp TTCATCCTCAAACCAACAGACCAGATCGGTTGTCAGGAACCTCAAGACCCGAGGGGGCGGACTTCACCGTaGGGTCATCATCGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: FILKPTDQIGCQEPQDPRGRTSP*GHHRCC
Trigger: GCAGCACCGATGATGACCGCACGGTGAAGTCCGCCC...CCTCGGGTCTTGAGGTTCCTGACAACCGATCTGGTCTGTTGGTTTGAGGATGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp CAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATCCACGTAGCGGGCGTTaGTCACATTGCTCACTGGGC +
Preference number: 4 (lower is better)
Translates to: QQRAASVPANLWLLKGEYPRSGR*SHCSLG
Trigger: GCCCAGTGAGCAATGTGAGCAACGCCCGCTACGTGG...ATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp TGCACGTGGTACAGAGAGAAGCAAACCAAGACCAACTGGATCCCAACGTGGGTATGGGCCTCGTCCACCTaGAGAGTGTCACAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: CTWYREKQTKTNWIPTWVWASST*RVSQSP
Trigger: GGGGGACTGTGACACTCTGCAGGTGGACGAGGCCCA...TACCCACGTTGGGATCCAGTTGGTCTTGGTTTGCTTCTCTCTGTACCACGTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GAAGTGGCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCGTAACCTTTCAGAGTTaGAATCGGGCCGTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: EVAKLVVVLIGTQQHWGIVTFQS*NRAVLP
Trigger: GGGCAGGACGGCCCGATTCCAACTCTGAAAGGTTAC...GATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGCCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp GAAGTGGCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCGTCGTGTCCAGGTCCTaGATTCGCAGTCGTGAACCA +
Preference number: 4 (lower is better)
Translates to: EVAKLVVVLIGTQQHWGIVVSRS*IRSREP
Trigger: TGGTTCACGACTGCGAATCCAGGACCTGGACACGAC...GATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGCCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp GAAGTGGCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCATTTGGGCTGTGCGTTaGACCCAGCCGCACAAACAG +
Preference number: 4 (lower is better)
Translates to: EVAKLVVVLIGTQQHWGIIWAVR*TQPHKQ
Trigger: CTGTTTGTGCGGCTGGGTCCAACGCACAGCCCAAAT...GATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGCCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTTGCAGGGCCCACGGCTaGCACTGGTGGCCTGACTTG +
Preference number: 4 (lower is better)
Translates to: GNAESILFMSLSALGPGSCRAHG*HWWPDL
Trigger: CAAGTCAGGCCACCAGTGCCAGCCGTGGGCCCTGCA...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp TTCATCCTCAAACCAACAGACCAGATCGGTTGTCAGGAACCTCAAGACCCGAGGGTCGCCGCTGCGGTGTaGACGCAGATGCCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: FILKPTDQIGCQEPQDPRVAAAV*TQMPSA
Trigger: AGCAGAAGGCATCTGCGTCCACACCGCAGCGGCGAC...CCTCGGGTCTTGAGGTTCCTGACAACCGATCTGGTCTGTTGGTTTGAGGATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp TATGGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTGCGTGGTGTTGCTaGCCCCCGAGGTCTGCGCCG +
Preference number: 4 (lower is better)
Translates to: YGNAESILFMSLSALGPGSAWCC*PPRSAP
Trigger: CGGCGCAGACCTCGGGGGCCAGCAACACCACGCAGA...CCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCCATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp GTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCGATGAACTGGGGCTGTaGGAAGGGCGGGGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: VPANLWLLKGEYSQQGGSDELGL*EGRGLL
Trigger: CAGAAGGCCCCGCCCTTCCCACAGCCCCAGTTCATC...GCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp CCTCAAACCAACAGACCAGATCGGTTGTCAGGAACCTCAAGACCCGAGGTGCCTTGCAAACAAGCCCACTaGCCGGCGGGCTCTTGTGAT +
Preference number: 4 (lower is better)
Translates to: PQTNRPDRLSGTSRPEVPCKQAH*PAGSCD
Trigger: ATCACAAGAGCCCGCCGGCCAGTGGGCTTGTTTGCA...AGGCACCTCGGGTCTTGAGGTTCCTGACAACCGATCTGGTCTGTTGGTTTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR CAA 72 bp CAGGCAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTaGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: QAAEGSLRSSES*AAKGRIFSAGR
Trigger: CCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp TTCATCCTCAAACCAACAGACCAGATCGGTTGTCAGGAACCTCAAGACCCGAGGTGGGATGGCGAACTGTaGGCACTGGTCCGACAGGTG +
Preference number: 4 (lower is better)
Translates to: FILKPTDQIGCQEPQDPRWDGEL*ALVRQV
Trigger: CACCTGTCGGACCAGTGCTCACAGTTCGCCATCCCA...CCTCGGGTCTTGAGGTTCCTGACAACCGATCTGGTCTGTTGGTTTGAGGATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp TGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCAGAAATGGAGCCCCTTCACACTTGGGCAGCTaGAGCCGCATGAGGATGAGC +
Preference number: 4 (lower is better)
Translates to: WLLKGEYSQQGGSRNGAPSHLGS*SRMRMS
Trigger: GCTCATCCTCATGCGGCTTCAGCTGCCCAAGTGTGA...AGGGGCTCCATTTCTGCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAATCACACTTGGGCAGCTaGAGCCGCATGAGGATGAGC +
Preference number: 4 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKSHLGS*SRMRMS
Trigger: GCTCATCCTCATGCGGCTTCAGCTGCCCAAGTGTGA...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR TCA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTGCTGCAGGCCGTAGCTaGAGACCTCCCACAGGACCA +
Preference number: 4 (lower is better)
Translates to: GNAESILFMSLSALGPGSAAGRS*RPPTGP
Trigger: TGGTCCTGTGGGAGGTCTTCAGCTACGGCCTGCAGC...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAACACTGGTCCGACAGGTaGGTAGACGTGCCGATCATG +
Preference number: 4 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKHWSDR*VDVPIM
Trigger: CATGATCGGCACGTCTACGCACCTGTCGGACCAGTG...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp GAAGTGGCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCGGCCTGACTTGGTGGTaGTTGCCGTTCCTCTGTAAT +
Preference number: 4 (lower is better)
Translates to: EVAKLVVVLIGTQQHWGIGLTWW*LPFLCN
Trigger: ATTACAGAGGAACGGCAAGCACCACCAAGTCAGGCC...GATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGCCACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp CACTACCAGTCTACCACCAGAATCAATGTATACAGCCCTGGGGATGACCATGTGCGCAGCATAGCCTCATaGCGGAACTCCTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: HYQSTTRINVYSPGDDHVRSIAS*RNSSRR
Trigger: CCTGCGGGAGGAGTTCCGGCATGAGGCTATGCTGCG...CACATGGTCATCCCCAGGGCTGTATACATTGATTCTGGTGGTAGACTGGTAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTCGCAGCATAGCCTCATaGCGGAACTCCTCCCGCAGG +
Preference number: 4 (lower is better)
Translates to: GNAESILFMSLSALGPGSRSIAS*RNSSRR
Trigger: CCTGCGGGAGGAGTTCCGGCATGAGGCTATGCTGCG...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp ACATGGAGTGAAGCTGCCACCTATTTTCTTGAAAGGCATTTGCTGCTCACTACCCTGCCCACGTCCGAGTaGGGCGAGCGCATGACCAGG +
Preference number: 4 (lower is better)
Translates to: TWSEAATYFLERHLLLTTLPTSE*GERMTR
Trigger: CCTGGTCATGCGCTCGCCGCACTCGGACGTGGGCAG...GGTAGTGAGCAGCAAATGCCTTTCAAGAAAATAGGTGGCAGCTTCACTCCATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp TATGGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGGGTCATCATCGGTGCTaGCCACGTCCGAGTGCGGCG +
Preference number: 4 (lower is better)
Translates to: YGNAESILFMSLSALGPGGHHRC*PRPSAA
Trigger: CGCCGCACTCGGACGTGGGCAGCACCGATGATGACC...CCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTTGCGGTCATCATCGGTaGTGCCCACGTCCGAGTGCG +
Preference number: 4 (lower is better)
Translates to: GNAESILFMSLSALGPGSCGHHR*CPRPSA
Trigger: CGCACTCGGACGTGGGCAGCACCGATGATGACCGCA...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp AAATGGAGCCCCTTCATCCTCAAACCAACAGACCAGATCGGTTGTCAGGAACCTCCCCGCCGCGATCTGTaGCACAAGGTGCACGAAGTC +
Preference number: 4 (lower is better)
Translates to: KWSPFILKPTDQIGCQEPPRRDL*HKVHEV
Trigger: GACTTCGTGCACCTTGTGGCACAGATCGCGGCGGGG...AGGTTCCTGACAACCGATCTGGTCTGTTGGTTTGAGGATGAAGGGGCTCCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp CAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATGGGCGTTGCTCACATTaGTCACTGGGCTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: QQRAASVPANLWLLKGEYGRCSH*SLGWCS
Trigger: TGAGCACCAGCCCAGTGAGCAATGTGAGCAACGCCC...ATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp TGCACGTGGTACAGAGAGAAGCAAACCAAGACCAACTGGATCCCAACGTGGGTACCTCAAGACCCGAGGTaGCTCCTCGCTGCCTTTTGC +
Preference number: 4 (lower is better)
Translates to: CTWYREKQTKTNWIPTWVPQDPR*LLAAFC
Trigger: GCAAAAGGCAGCGAGGAGGCACCTCGGGTCTTGAGG...TACCCACGTTGGGATCCAGTTGGTCTTGGTTTGCTTCTCTCTGTACCACGTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAAGCGAACTGTGAGCACTaGTCCGACAGGTGCGTAGAC +
Preference number: 4 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKANCEH*SDRCVD
Trigger: GTCTACGCACCTGTCGGACCAGTGCTCACAGTTCGC...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp GAAGTGGCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCAGAGGAAACACGAAGTaGCAGAAGGATGGGATGGCG +
Preference number: 4 (lower is better)
Translates to: EVAKLVVVLIGTQQHWGIRGNTK*QKDGMA
Trigger: CGCCATCCCATCCTTCTGCCACTTCGTGTTTCCTCT...GATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGCCACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp CATTTGCTGCTCACTACCAGTCTACCACCAGAATCAATGTATACAGCCCTGGGGGGTTGGAGCGGGCGATaGTGTACTCCTGGCGGCACA +
Preference number: 4 (lower is better)
Translates to: HLLLTTSLPPESMYTALGGWSGR*CTPGGT
Trigger: TGTGCCGCCAGGAGTACACCATCGCCCGCTCCAACC...CCCCAGGGCTGTATACATTGATTCTGGTGGTAGACTGGTAGTGAGCAGCAAATG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTGGTTGGAGCGGGCGATaGTGTACTCCTGGCGGCACA +
Preference number: 4 (lower is better)
Translates to: GNAESILFMSLSALGPGSGWSGR*CTPGGT
Trigger: TGTGCCGCCAGGAGTACACCATCGCCCGCTCCAACC...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp TATGGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGCGGGGCTCTCAGGCATaGGCAGCGCCTCACACTTGG +
Preference number: 4 (lower is better)
Translates to: YGNAESILFMSLSALGPGRGSQA*AAPHTW
Trigger: CCAAGTGTGAGGCGCTGCCCATGCCTGAGAGCCCCG...CCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp GTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCCAATGCGCATGCAGTTaGCAGCGTCGGGGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: VPANLWLLKGEYSQQGGSQCACS*QRRGSQ
Trigger: CTGAGAGCCCCGACGCTGCCAACTGCATGCGCATTG...GCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp TATGGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGGTGCTGGACAGGTGGTaGCTGTGGGGGTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: YGNAESILFMSLSALGPGVLDRW*LWGCCR
Trigger: CCTGCAGCACCCCCACAGCCACCACCTGTCCAGCAC...CCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp TTCCGACCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTTTGGCCTGTTTGTGCTaGTTAATGAGGGGCATTTCC +
Preference number: 4 (lower is better)
Translates to: FRPQQAAEGSLRSSESLALACLC*LMRGIS
Trigger: GGAAATGCCCCTCATTAACCAGCACAAACAGGCCAA...AGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGGTCGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GTGGGATTTACAAATAGGACCAACAATGTGTGCGGGGCACAGACGGCTGCCTGTGAACCACGTGGTGGCTaGATAGGTACTCCATCCCCG +
Preference number: 4 (lower is better)
Translates to: VGFTNRTNNVCGAQTAACEPRGG*IGTPSP
Trigger: CGGGGATGGAGTACCTATCCAGCCACCACGTGGTTC...ACAGGCAGCCGTCTGTGCCCCGCACACATTGTTGGTCCTATTTGTAAATCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp TATGGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGGCTCGGAGCCGGCTGTaGATGTCCTTGAAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: YGNAESILFMSLSALGPGARSRL*MSLKRG
Trigger: GCCCCGCTTCAAGGACATCCACAGCCGGCTCCGAGC...CCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp GTGGGATTTACAAATAGGACCAACAATGTGTGCGGGGCACAGACGGCTGCCTGTCTGGGCCCCATCTTCTaGGGCGTTCTGTGTGTCATC +
Preference number: 4 (lower is better)
Translates to: VGFTNRTNNVCGAQTAACLGPIF*GVLCVI
Trigger: GATGACACACAGAACGCCCCAGAAGATGGGGCCCAG...ACAGGCAGCCGTCTGTGCCCCGCACACATTGTTGGTCCTATTTGTAAATCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR CAA 72 bp TTGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTaGTCTTCCGACCCCAACAGGCAGCAGAGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LLYLRNSHFRSP*SSDPNRQQRAA
Trigger: GGCTGCCCTCTGCTGCCTGTTGGGGTCGGAAGACAAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp TATGGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGCTCCCAGCTCCTCCATaGACCTCACCGCAGACAGGC +
Preference number: 4 (lower is better)
Translates to: YGNAESILFMSLSALGPGLPAPP*TSPQTG
Trigger: GCCTGTCTGCGGTGAGGTTCATGGAGGAGCTGGGAG...CCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR TCA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTGTGGCCAGGTCCTTGTaGACCACGTGGTGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: GNAESILFMSLSALGPGSVARSL*TTWWLD
Trigger: ATCCAGCCACCACGTGGTTCACAAGGACCTGGCCAC...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR TCA 90 bp CATTTGCTGCTCACTACCAGTCTACCACCAGAATCAATGTATACAGCCCTGGGGTCCAGCACTCGATCATaGGGGCATACACCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: HLLLTTSLPPESMYTALGSSTRS*GHTPRR
Trigger: CCGCCTGGGTGTATGCCCTCATGATCGAGTGCTGGA...CCCCAGGGCTGTATACATTGATTCTGGTGGTAGACTGGTAGTGAGCAGCAAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAAAGGGGGTGGGTTTCCTaGCACCTTGCAGTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKRGWVS*HLAVQN
Trigger: ATTCTGCACTGCAAGGTGGCAGGAAACCCACCCCCT...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp CATAAAAATATTCATGGGGCTTCCTCTTCCAACCACATGAAGCCAGAATGGACATGGCTGTGGGGGTGCTaGAGGGCCCACGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: HKNIHGASSSNHMKPEWTWLWGC*RAHGWH
Trigger: GTGCCAGCCGTGGGCCCTGCAGCACCCCCACAGCCA...TGTCCATTCTGGCTTCATGTGGTTGGAAGAGGAAGCCCCATGAATATTTTTATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAACGGTGTGGACGCAGATaGCTTCTGCTTATTCCGGCA +
Preference number: 4 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKRCGRR*LLLIPA
Trigger: TGCCGGAATAAGCAGAAGGCATCTGCGTCCACACCG...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp TATGGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGGAAGTCACATGGCAGTaGAGGCTGGGGTCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: YGNAESILFMSLSALGPGEVTWQ*RLGSRG
Trigger: GCCACGGGACCCCAGCCTGCACTGCCATGTGACTTC...CCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp CATTTGCTGCTCACTACCAGTCTACCACCAGAATCAATGTATACAGCCCTGGGGAGGACCAACAATGTGTaGGGGGCACAGACGGCTGCC +
Preference number: 4 (lower is better)
Translates to: HLLLTTSLPPESMYTALGRTNNV*GAQTAA
Trigger: GGCAGCCGTCTGTGCCCCGCACACATTGTTGGTCCT...CCCCAGGGCTGTATACATTGATTCTGGTGGTAGACTGGTAGTGAGCAGCAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp CAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATGTCGTGTCCAGGTCCTaGATTCGCAGTCGTGAACCA +
Preference number: 4 (lower is better)
Translates to: QQRAASVPANLWLLKGEYVVSRS*IRSREP
Trigger: TGGTTCACGACTGCGAATCCAGGACCTGGACACGAC...ATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp TGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCAGAAATGGAGCCCCTTGGTCTTCATCCCGTTaGTGGCCACGCACTGGTAGT +
Preference number: 4 (lower is better)
Translates to: WLLKGEYSQQGGSRNGAPWSSSR*WPRTGS
Trigger: ACTACCAGTGCGTGGCCACCAACGGGATGAAGACCA...AGGGGCTCCATTTCTGCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAAGGCAGAAGGATGGGATaGCGAACTGTGAGCACTGGT +
Preference number: 4 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKGRRMG*RTVSTG
Trigger: ACCAGTGCTCACAGTTCGCCATCCCATCCTTCTGCC...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp TATGGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGGCGATGGTGTACTCCTaGCGGCACAGGTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: YGNAESILFMSLSALGPGAMVYS*RHRSLS
Trigger: GGAGAGCGACCTGTGCCGCCAGGAGTACACCATCGC...CCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTCACGGCTGGCACTGGTaGCCTGACTTGGTGGTGCTT +
Preference number: 4 (lower is better)
Translates to: GNAESILFMSLSALGPGSHGWHW*PDLVVL
Trigger: AAGCACCACCAAGTCAGGCCACCAGTGCCAGCCGTG...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp GAAGGCACACATTTTGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTTGTCTGCAGGGCCCACGGCTaGCACTGGTGGCCTGACTTG +
Preference number: 4 (lower is better)
Translates to: EGTHFVVSQELPFQKPLVCRAHG*HWWPDL
Trigger: CAAGTCAGGCCACCAGTGCCAGCCGTGGGCCCTGCA...GACAAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAAGCAAGCGATGACCAGTaGAATTGCGATGCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKASDDQ*NCDAGD
Trigger: GTCCCCAGCATCGCAATTCCACTGGTCATCGCTTGC...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAATTTCCATGTCTTGGCTaGGCGAGGCCATCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKFPCLG*ARPSAV
Trigger: GACAGCTGATGGCCTCGCCCAGCCAAGACATGGAAA...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp CAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATATGACCAGGAATTCGTaGAGGTCGCCGTGCGAACAG +
Preference number: 4 (lower is better)
Translates to: QQRAASVPANLWLLKGEYMTRNS*RSPCEQ
Trigger: CTGTTCGCACGGCGACCTCCACGAATTCCTGGTCAT...ATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAAATGACCAGGAATTCGTaGAGGTCGCCGTGCGAACAG +
Preference number: 4 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKMTRNS*RSPCEQ
Trigger: CTGTTCGCACGGCGACCTCCACGAATTCCTGGTCAT...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp GTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCCCACCACATCCTGGTTaGAGTACCCGCAGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: VPANLWLLKGEYSQQGGSPPHPG*STRSRA
Trigger: AGCCCTACTGCGGGTACTCCAACCAGGATGTGGTGG...GCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GAAGGCACACATTTTGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTTGTCGCTCGGAGCCGGCTGTaGATGTCCTTGAAGCGGGGC +
Preference number: 4 (lower is better)
Translates to: EGTHFVVSQELPFQKPLVARSRL*MSLKRG
Trigger: GCCCCGCTTCAAGGACATCCACAGCCGGCTCCGAGC...GACAAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAACCGAGCTGTTGTAGTTaGAAAGGTTGCCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKPSCCS*KGCPRL
Trigger: GAGCCTGGGGCAACCTTTCCAACTACAACAGCTCGG...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp GTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCCATTGCTCACTGGGCTaGTGCTCAGGGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: VPANLWLLKGEYSQQGGSHCSLG*CSGSWS
Trigger: AGACCAGCTCCCTGAGCACCAGCCCAGTGAGCAATG...GCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTGCGGTTGAAGTCACATaGCAGTGCAGGCTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: GNAESILFMSLSALGPGSAVEVT*QCRLGS
Trigger: GGACCCCAGCCTGCACTGCCATGTGACTTCAACCGC...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp CATTTGCTGCTCACTACCAGTCTACCACCAGAATCAATGTATACAGCCCTGGGGGCACCGGGTAGAAGTTaGGCAGGTAGGCCCCATAGG +
Preference number: 4 (lower is better)
Translates to: HLLLTTSLPPESMYTALGAPGRS*AGRPHR
Trigger: CCTATGGGGCCTACCTGCCCAACTTCTACCCGGTGC...CCCCAGGGCTGTATACATTGATTCTGGTGGTAGACTGGTAGTGAGCAGCAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp ACATGGAGTGAAGCTGCCACCTATTTTCTTGAAAGGCATTTGCTGCTCACTACCCCGAACCCCGGGCCCTaGTGCCACTCAAGCTTCCAG +
Preference number: 4 (lower is better)
Translates to: TWSEAATYFLERHLLLTTPNPGP*CHSSFQ
Trigger: CTGGAAGCTTGAGTGGCACCAGGGCCCGGGGTTCGG...GGTAGTGAGCAGCAAATGCCTTTCAAGAAAATAGGTGGCAGCTTCACTCCATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp GAAGTGGCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCTCTGTAATCCATGCCTaGGCCGTTATAGCACTGATG +
Preference number: 4 (lower is better)
Translates to: EVAKLVVVLIGTQQHWGISVIHA*AVIALM
Trigger: CATCAGTGCTATAACGGCTCAGGCATGGATTACAGA...GATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGCCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR TCA 90 bp ACATGGAGTGAAGCTGCCACCTATTTTCTTGAAAGGCATTTGCTGCTCACTACCCTCCCAGCTCCTCCATaGACCTCACCGCAGACAGGC +
Preference number: 4 (lower is better)
Translates to: TWSEAATYFLERHLLLTTLPAPP*TSPQTG
Trigger: GCCTGTCTGCGGTGAGGTTCATGGAGGAGCTGGGAG...GGTAGTGAGCAGCAAATGCCTTTCAAGAAAATAGGTGGCAGCTTCACTCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp CCTCAAACCAACAGACCAGATCGGTTGTCAGGAACCTCAAGACCCGAGGTGCCTGAAGAGGCCCAAGTCTaGGATCTTCACGTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: PQTNRPDRLSGTSRPEVPEEAQV*DLHVQL
Trigger: AAGCTGAACGTGAAGATCTCAGACTTGGGCCTCTTC...AGGCACCTCGGGTCTTGAGGTTCCTGACAACCGATCTGGTCTGTTGGTTTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp CATTTGCTGCTCACTACCAGTCTACCACCAGAATCAATGTATACAGCCCTGGGGAGAACTTGCCGTACATaGTGGCCTCTGGGGCCATCC +
Preference number: 4 (lower is better)
Translates to: HLLLTTSLPPESMYTALGRTCRT*WPLGPS
Trigger: GGATGGCCCCAGAGGCCATCATGTACGGCAAGTTCT...CCCCAGGGCTGTATACATTGATTCTGGTGGTAGACTGGTAGTGAGCAGCAAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp ACATGGAGTGAAGCTGCCACCTATTTTCTTGAAAGGCATTTGCTGCTCACTACCGCTGCAGGCCGTAGCTaGAGACCTCCCACAGGACCA +
Preference number: 4 (lower is better)
Translates to: TWSEAATYFLERHLLLTTAAGRS*RPPTGP
Trigger: TGGTCCTGTGGGAGGTCTTCAGCTACGGCCTGCAGC...GGTAGTGAGCAGCAAATGCCTTTCAAGAAAATAGGTGGCAGCTTCACTCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp GAAGTGGCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCCTCTTCCAACCACATaGAGCCAGAATGGACATGAA +
Preference number: 4 (lower is better)
Translates to: EVAKLVVVLIGTQQHWGIPLPTT*SQNGHE
Trigger: TTCATGTCCATTCTGGCTTCATGTGGTTGGAAGAGG...GATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGCCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR TCA 90 bp CTTTATTGGATACACCGGGTGTGGGATTTACAAATAGGACCAACAATGTGTGCGGTCATCAGCGCCCTCTaGGAGCAGGGCTGCCCTGTC +
Preference number: 4 (lower is better)
Translates to: LYWIHRVWDLQIGPTMCAVISAL*EQGCPV
Trigger: GACAGGGCAGCCCTGCTCTCAGAGGGCGCTGATGAC...CGCACACATTGTTGGTCCTATTTGTAAATCCCACACCCGGTGTATCCAATAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp AAATGGAGCCCCTTCATCCTCAAACCAACAGACCAGATCGGTTGTCAGGAACCTCCTGCCACCTTGCAGTaGAGAATTGCCGTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: KWSPFILKPTDQIGCQEPPATLQ*RIAVWP
Trigger: AGGCCAGACGGCAATTCTGCACTGCAAGGTGGCAGG...AGGTTCCTGACAACCGATCTGGTCTGTTGGTTTGAGGATGAAGGGGCTCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAAGGTTTCCTGCCACCTTaGAGTGCAGAATTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKGFLPP*SAELPS
Trigger: AGACGGCAATTCTGCACTGCAAGGTGGCAGGAAACC...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAAGTTGCCAATGAAGCGTaGACAGGCAATTCCCCGGTA +
Preference number: 4 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKVANEA*TGNSPV
Trigger: TACCGGGGAATTGCCTGTGCACGCTTCATTGGCAAC...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp CACTACCAGTCTACCACCAGAATCAATGTATACAGCCCTGGGGATGACCATGTGCACTGGTCCGACAGGTaGGTAGACGTGCCGATCATG +
Preference number: 4 (lower is better)
Translates to: HYQSTTRINVYSPGDDHVHWSDR*VDVPIM
Trigger: CATGATCGGCACGTCTACGCACCTGTCGGACCAGTG...CACATGGTCATCCCCAGGGCTGTATACATTGATTCTGGTGGTAGACTGGTAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp ACATGGAGTGAAGCTGCCACCTATTTTCTTGAAAGGCATTTGCTGCTCACTACCGGATGCCAATGCGCATaGAGTTGGCAGCGTCGGGGC +
Preference number: 4 (lower is better)
Translates to: TWSEAATYFLERHLLLTTGCQCA*SWQRRG
Trigger: GCCCCGACGCTGCCAACTGCATGCGCATTGGCATCC...GGTAGTGAGCAGCAAATGCCTTTCAAGAAAATAGGTGGCAGCTTCACTCCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp TTCATCCTCAAACCAACAGACCAGATCGGTTGTCAGGAACCTCAAGACCCGAGGGAATCCCCATCTTGCTaGTGTCTCGGGGACTACACG +
Preference number: 4 (lower is better)
Translates to: FILKPTDQIGCQEPQDPRESPSC*CLGDYT
Trigger: CGTGTAGTCCCCGAGACAGCAGCAAGATGGGGATTC...CCTCGGGTCTTGAGGTTCCTGACAACCGATCTGGTCTGTTGGTTTGAGGATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp GAAGGCACACATTTTGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTTGTCATCAGCTGTCGCCGCTaGGGTGTGGACGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: EGTHFVVSQELPFQKPLVISCRR*GVDADA
Trigger: GGCATCTGCGTCCACACCGCAGCGGCGACAGCTGAT...GACAAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp GAAGGCACACATTTTGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTTGTCGGGCAAGGCAGCACCTaGCGGTTCCGGATCATCTCC +
Preference number: 4 (lower is better)
Translates to: EGTHFVVSQELPFQKPLVGQGST*RFRIIS
Trigger: GGAGATGATCCGGAACCGGCAGGTGCTGCCTTGCCC...GACAAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp GAAGGCACACATTTTGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTTGTCTGCTGCGGGGCCATCTaGATTGGGATCTGCACCGGG +
Preference number: 4 (lower is better)
Translates to: EGTHFVVSQELPFQKPLVCCGAI*IGICTG
Trigger: CCCGGTGCAGATCCCAATGCAGATGGCCCCGCAGCA...GACAAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp ACATGGAGTGAAGCTGCCACCTATTTTCTTGAAAGGCATTTGCTGCTCACTACCTGCTGCCAGACCCCCTaGCTGGCTTGGGTGCTCCTA +
Preference number: 4 (lower is better)
Translates to: TWSEAATYFLERHLLLTTCCQTP*LAWVLL
Trigger: TAGGAGCACCCAAGCCAGGCAGGGGGTCTGGCAGCA...GGTAGTGAGCAGCAAATGCCTTTCAAGAAAATAGGTGGCAGCTTCACTCCATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp CCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTGCTAAATTGAAAGGCATTTGCTaGTCACTACCAGTCTACCAC +
Preference number: 4 (lower is better)
Translates to: PQQAAEGSLRSSESLAAKLKGIC*SLPVYH
Trigger: GTGGTAGACTGGTAGTGAGCAGCAAATGCCTTTCAA...TTTAGCAGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp TATGGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGCCGCACGTTAGGGGGTaGGTTTCCTGCCACCTTGCA +
Preference number: 4 (lower is better)
Translates to: YGNAESILFMSLSALGPGPHVRG*VSCHLA
Trigger: TGCAAGGTGGCAGGAAACCCACCCCCTAACGTGCGG...CCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCCATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp AAATGGAGCCCCTTCATCCTCAAACCAACAGACCAGATCGGTTGTCAGGAACCTGGTGGCCTGACTTGGTaGTGCTTGCCGTTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: KWSPFILKPTDQIGCQEPGGLTW*CLPFLC
Trigger: ACAGAGGAACGGCAAGCACCACCAAGTCAGGCCACC...AGGTTCCTGACAACCGATCTGGTCTGTTGGTTTGAGGATGAAGGGGCTCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp TATGGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGCAGGGAAGTCTGTGCTaGACAGGTGGTGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: YGNAESILFMSLSALGPGQGSLC*TGGGCG
Trigger: CCCACAGCCACCACCTGTCCAGCACAGACTTCCCTG...CCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp AAATGGAGCCCCTTCATCCTCAAACCAACAGACCAGATCGGTTGTCAGGAACCTGGCATTTCCATGTCTTaGCTGGGCGAGGCCATCAGC +
Preference number: 4 (lower is better)
Translates to: KWSPFILKPTDQIGCQEPGISMS*LGEAIS
Trigger: GCTGATGGCCTCGCCCAGCCAAGACATGGAAATGCC...AGGTTCCTGACAACCGATCTGGTCTGTTGGTTTGAGGATGAAGGGGCTCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTCCACCACATCCTGGTTaGAGTACCCGCAGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: GNAESILFMSLSALGPGSPPHPG*STRSRA
Trigger: AGCCCTACTGCGGGTACTCCAACCAGGATGTGGTGG...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp CATAAAAATATTCATGGGGCTTCCTCTTCCAACCACATGAAGCCAGAATGGACAGGGAGCTGGTCTGCGTaGTGTTGCTGGCCCCCGAGG +
Preference number: 4 (lower is better)
Translates to: HKNIHGASSSNHMKPEWTGSWSA*CCWPPR
Trigger: CCTCGGGGGCCAGCAACACCACGCAGACCAGCTCCC...TGTCCATTCTGGCTTCATGTGGTTGGAAGAGGAAGCCCCATGAATATTTTTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAAGCTGTTGATGTGAAGTaGCCAAGCTCGTGGTGGTGT +
Preference number: 4 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKAVDVK*PSSWWC
Trigger: ACACCACCACGAGCTTGGCCACTTCACATCAACAGC...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR TCA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAAAGAAAAGGCAAGCGATaGCCAGTGGAATTGCGATGC +
Preference number: 4 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKRKGKR*PVELRC
Trigger: GCATCGCAATTCCACTGGTCATCGCTTGCCTTTTCT...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR TCA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTTGTCCTTCAGCGTTTTaGTGGCCACAGCCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: GNAESILFMSLSALGPGSCPSAF*WPQPGS
Trigger: AGACCCAGGCTGTGGCCATCAAAACGCTGAAGGACA...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR TCA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTGGTCTGTCATGCGGTTaGAGTCACATGGCAGTGCAG +
Preference number: 4 (lower is better)
Translates to: GNAESILFMSLSALGPGSGLSCG*SHMAVQ
Trigger: CTGCACTGCCATGTGACTTCAACCGCATGACAGACC...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp TATGGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGGGAATCGGGCCGTCCTaGCCATCAAGGGGTCCTAAA +
Preference number: 4 (lower is better)
Translates to: YGNAESILFMSLSALGPGGIGPS*PSRGPK
Trigger: TTTAGGACCCCTTGATGGGCAGGACGGCCCGATTCC...CCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCCATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp TGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCAGAAATGGAGCCCCTCTTGCAGTGCAGAATTaGCGTCTGGCCTTGGACAAT +
Preference number: 4 (lower is better)
Translates to: WLLKGEYSQQGGSRNGAPLAVQN*RLALDN
Trigger: ATTGTCCAAGGCCAGACGGCAATTCTGCACTGCAAG...AGGGGCTCCATTTCTGCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAACTTGCAGTGCAGAATTaGCGTCTGGCCTTGGACAAT +
Preference number: 4 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKLAVQN*RLALDN
Trigger: ATTGTCCAAGGCCAGACGGCAATTCTGCACTGCAAG...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp TATGGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGCCTGCCACCTTGCAGTaGAGAATTGCCGTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: YGNAESILFMSLSALGPGPATLQ*RIAVWP
Trigger: AGGCCAGACGGCAATTCTGCACTGCAAGGTGGCAGG...CCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp TGCACGTGGTACAGAGAGAAGCAAACCAAGACCAACTGGATCCCAACGTGGGTAGTTGCCAATGAAGCGTaGACAGGCAATTCCCCGGTA +
Preference number: 4 (lower is better)
Translates to: CTWYREKQTKTNWIPTWVVANEA*TGNSPV
Trigger: TACCGGGGAATTGCCTGTGCACGCTTCATTGGCAAC...TACCCACGTTGGGATCCAGTTGGTCTTGGTTTGCTTCTCTCTGTACCACGTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp TATGGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGGCTCAGGGAAGTCTGTaGTGGACAGGTGGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: YGNAESILFMSLSALGPGAQGSL*WTGGGC
Trigger: ACAGCCACCACCTGTCCAGCACAGACTTCCCTGAGC...CCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTGAATCCCCATCTTGCTaGTGTCTCGGGGACTACACG +
Preference number: 4 (lower is better)
Translates to: GNAESILFMSLSALGPGSESPSC*CLGDYT
Trigger: CGTGTAGTCCCCGAGACAGCAGCAAGATGGGGATTC...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp CAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATCCAGTGGAATTGCGATaGTGGGGACCAAGATGTACA +
Preference number: 4 (lower is better)
Translates to: QQRAASVPANLWLLKGEYPVELR*WGPRCT
Trigger: TGTACATCTTGGTCCCCAGCATCGCAATTCCACTGG...ATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp TGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCAGAAATGGAGCCCCTGACGCAGATGCCTTCTaGTTATTCCGGCACATGCAA +
Preference number: 4 (lower is better)
Translates to: WLLKGEYSQQGGSRNGAPDADAF*LFRHMQ
Trigger: TTGCATGTGCCGGAATAAGCAGAAGGCATCTGCGTC...AGGGGCTCCATTTCTGCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp GAATCTTTGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCAGAAATGGACGACGTTGGGGTGTTaGAGCCGTGCTCGCAGCATA +
Preference number: 4 (lower is better)
Translates to: ESLAAKGRIFSAGRQQKWTTLGC*SRARSI
Trigger: TATGCTGCGAGCACGGCTGCAACACCCCAACGTCGT...CCATTTCTGCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCAAAGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp AAAATGAATGGACCTCATGTGCACGTGGTACAGAGAGAAGCAAACCAAGACCAATGCGGTCATCATCGGTaGTGCCCACGTCCGAGTGCG +
Preference number: 4 (lower is better)
Translates to: KMNGPHVHVVQREANQDQCGHHR*CPRPSA
Trigger: CGCACTCGGACGTGGGCAGCACCGATGATGACCGCA...TTGGTCTTGGTTTGCTTCTCTCTGTACCACGTGCACATGAGGTCCATTCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp AAATGGAGCCCCTTCATCCTCAAACCAACAGACCAGATCGGTTGTCAGGAACCTCGTACACTAGCACATTaGGGGTGGCCAGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: KWSPFILKPTDQIGCQEPRTLAH*GWPGPC
Trigger: ACAAGGACCTGGCCACCCGCAATGTGCTAGTGTACG...AGGTTCCTGACAACCGATCTGGTCTGTTGGTTTGAGGATGAAGGGGCTCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp CATAAAAATATTCATGGGGCTTCCTCTTCCAACCACATGAAGCCAGAATGGACATGGTCTGCGTGGTGTTaGTGGCCCCCGAGGTCTGCG +
Preference number: 4 (lower is better)
Translates to: HKNIHGASSSNHMKPEWTWSAWC*WPPRSA
Trigger: CGCAGACCTCGGGGGCCAGCAACACCACGCAGACCA...TGTCCATTCTGGCTTCATGTGGTTGGAAGAGGAAGCCCCATGAATATTTTTATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp CGTTTTGAAATATTCACTCCATATATGACATGGAGTGAAGCTGCCACCTATTTTCTTCTCCGGCCCGGATaGGCCGCTCGGCTCCGGCCA +
Preference number: 4 (lower is better)
Translates to: RFEIFTPYMTWSEAATYFLLRPG*AARLRP
Trigger: TGGCCGGAGCCGAGCGGCGCATCCGGGCCGGAGAAG...AAAATAGGTGGCAGCTTCACTCCATGTCATATATGGAGTGAATATTTCAAAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp GAAGGCACACATTTTGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTTGTCCAGGGCTGCCCTGTCTaGCATGGATGTGTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: EGTHFVVSQELPFQKPLVQGCPV*HGCVGG
Trigger: CCCTCCAACACATCCATGGCAGACAGGGCAGCCCTG...GACAAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp AAATGGAGCCCCTTCATCCTCAAACCAACAGACCAGATCGGTTGTCAGGAACCTCTCCTCGCTGCCTTTTaGAGGCCCTTATTCCCAACG +
Preference number: 4 (lower is better)
Translates to: KWSPFILKPTDQIGCQEPLLAAF*RPLFPT
Trigger: CGTTGGGAATAAGGGCCTGCAAAAGGCAGCGAGGAG...AGGTTCCTGACAACCGATCTGGTCTGTTGGTTTGAGGATGAAGGGGCTCCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTTGGTCTTCATCCCGTTaGTGGCCACGCACTGGTAGT +
Preference number: 4 (lower is better)
Translates to: GNAESILFMSLSALGPGSWSSSR*WPRTGS
Trigger: ACTACCAGTGCGTGGCCACCAACGGGATGAAGACCA...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp TTCATCCTCAAACCAACAGACCAGATCGGTTGTCAGGAACCTCAAGACCCGAGGAGAGGAAACACGAAGTaGCAGAAGGATGGGATGGCG +
Preference number: 4 (lower is better)
Translates to: FILKPTDQIGCQEPQDPRRGNTK*QKDGMA
Trigger: CGCCATCCCATCCTTCTGCCACTTCGTGTTTCCTCT...CCTCGGGTCTTGAGGTTCCTGACAACCGATCTGGTCTGTTGGTTTGAGGATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp ACATGGAGTGAAGCTGCCACCTATTTTCTTGAAAGGCATTTGCTGCTCACTACCTTCATGGGGATGAACTaGGGCTGTGGGAAGGGCGGG +
Preference number: 4 (lower is better)
Translates to: TWSEAATYFLERHLLLTTFMGMN*GCGKGG
Trigger: CCCGCCCTTCCCACAGCCCCAGTTCATCCCCATGAA...GGTAGTGAGCAGCAAATGCCTTTCAAGAAAATAGGTGGCAGCTTCACTCCATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp CATAAAAATATTCATGGGGCTTCCTCTTCCAACCACATGAAGCCAGAATGGACACTGGCACTGGTGGCCTaGCTTGGTGGTGCTTGCCGT +
Preference number: 4 (lower is better)
Translates to: HKNIHGASSSNHMKPEWTLALVA*LGGACR
Trigger: ACGGCAAGCACCACCAAGTCAGGCCACCAGTGCCAG...TGTCCATTCTGGCTTCATGTGGTTGGAAGAGGAAGCCCCATGAATATTTTTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR TCA 90 bp AAAATGAATGGACCTCATGTGCACGTGGTACAGAGAGAAGCAAACCAAGACCAAGTGGCCAGGTCCTTGTaGACCACGTGGTGGCTGGAT +
Preference number: 4 (lower is better)
Translates to: KMNGPHVHVVQREANQDQVARSL*TTWWLD
Trigger: ATCCAGCCACCACGTGGTTCACAAGGACCTGGCCAC...TTGGTCTTGGTTTGCTTCTCTCTGTACCACGTGCACATGAGGTCCATTCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp ACATGGAGTGAAGCTGCCACCTATTTTCTTGAAAGGCATTTGCTGCTCACTACCGCCGGCGGGCTCTTGTaGTTGCTGAGTATGGTGTCT +
Preference number: 4 (lower is better)
Translates to: TWSEAATYFLERHLLLTTAGGLL*LLSMVS
Trigger: AGACACCATACTCAGCAATCACAAGAGCCCGCCGGC...GGTAGTGAGCAGCAAATGCCTTTCAAGAAAATAGGTGGCAGCTTCACTCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp CATTTGCTGCTCACTACCAGTCTACCACCAGAATCAATGTATACAGCCCTGGGGGGTTTCCTGCCACCTTaGAGTGCAGAATTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: HLLLTTSLPPESMYTALGGFLPP*SAELPS
Trigger: AGACGGCAATTCTGCACTGCAAGGTGGCAGGAAACC...CCCCAGGGCTGTATACATTGATTCTGGTGGTAGACTGGTAGTGAGCAGCAAATG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp GAATCTTTGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCAGAAATGGAGGGGGTGGGTTTCCTaGCACCTTGCAGTGCAGAAT +
Preference number: 4 (lower is better)
Translates to: ESLAAKGRIFSAGRQQKWRGWVS*HLAVQN
Trigger: ATTCTGCACTGCAAGGTGGCAGGAAACCCACCCCCT...CCATTTCTGCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCAAAGATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTACAGAATCCCCATCTTaGTGCTGTCTCGGGGACTAC +
Preference number: 4 (lower is better)
Translates to: GNAESILFMSLSALGPGSTESPS*CCLGDY
Trigger: GTAGTCCCCGAGACAGCAGCAAGATGGGGATTCTGT...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp CATAAAAATATTCATGGGGCTTCCTCTTCCAACCACATGAAGCCAGAATGGACAATCAGCTGTCGCCGCTaGGGTGTGGACGCAGATGCC +
Preference number: 4 (lower is better)
Translates to: HKNIHGASSSNHMKPEWTISCRR*GVDADA
Trigger: GGCATCTGCGTCCACACCGCAGCGGCGACAGCTGAT...TGTCCATTCTGGCTTCATGTGGTTGGAAGAGGAAGCCCCATGAATATTTTTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp CCTCAAACCAACAGACCAGATCGGTTGTCAGGAACCTCAAGACCCGAGGTGCCTAGTTTGGCCTGTTTGTaGTGGTTAATGAGGGGCATT +
Preference number: 4 (lower is better)
Translates to: PQTNRPDRLSGTSRPEVPSLACL*WLMRGI
Trigger: AATGCCCCTCATTAACCAGCACAAACAGGCCAAACT...AGGCACCTCGGGTCTTGAGGTTCCTGACAACCGATCTGGTCTGTTGGTTTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp CTTTATTGGATACACCGGGTGTGGGATTTACAAATAGGACCAACAATGTGTGCGGGGGTGTTGCAGCCGTaGTCGCAGCATAGCCTCATG +
Preference number: 4 (lower is better)
Translates to: LYWIHRVWDLQIGPTMCAGVLQP*SQHSLM
Trigger: CATGAGGCTATGCTGCGAGCACGGCTGCAACACCCC...CGCACACATTGTTGGTCCTATTTGTAAATCCCACACCCGGTGTATCCAATAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp CATAAAAATATTCATGGGGCTTCCTCTTCCAACCACATGAAGCCAGAATGGACAGGGCGGACTTCACCGTaGGGTCATCATCGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: HKNIHGASSSNHMKPEWTGRTSP*GHHRCC
Trigger: GCAGCACCGATGATGACCGCACGGTGAAGTCCGCCC...TGTCCATTCTGGCTTCATGTGGTTGGAAGAGGAAGCCCCATGAATATTTTTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp CATAAAAATATTCATGGGGCTTCCTCTTCCAACCACATGAAGCCAGAATGGACACCCCGCCGCGATCTGTaGCACAAGGTGCACGAAGTC +
Preference number: 4 (lower is better)
Translates to: HKNIHGASSSNHMKPEWTPRRDL*HKVHEV
Trigger: GACTTCGTGCACCTTGTGGCACAGATCGCGGCGGGG...TGTCCATTCTGGCTTCATGTGGTTGGAAGAGGAAGCCCCATGAATATTTTTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp AAAATGAATGGACCTCATGTGCACGTGGTACAGAGAGAAGCAAACCAAGACCAACTGCTTCCTGCACGGTaGTCTGGGCCCCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: KMNGPHVHVVQREANQDQLLPAR*SGPHLL
Trigger: CAGAAGATGGGGCCCAGAGCACCGTGCAGGAAGCAG...TTGGTCTTGGTTTGCTTCTCTCTGTACCACGTGCACATGAGGTCCATTCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp TTGAAGGCACACATTTTGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTTGCCGCACGTTAGGGGGTaGGTTTCCTGCCACCTTGCA +
Preference number: 4 (lower is better)
Translates to: LKAHILLYLRNSHFRSPLPHVRG*VSCHLA
Trigger: TGCAAGGTGGCAGGAAACCCACCCCCTAACGTGCGG...CAAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp TGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCAGAAATGGAGCCCCTCTGAAAGTTATGATTTaGGCTGTGCGTTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: WLLKGEYSQQGGSRNGAPLKVMI*AVRWTQ
Trigger: CTGGGTCCAACGCACAGCCCAAATCATAACTTTCAG...AGGGGCTCCATTTCTGCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp TTGAAGGCACACATTTTGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTTGCAGGGAAGTCTGTGCTaGACAGGTGGTGGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: LKAHILLYLRNSHFRSPLQGSLC*TGGGCG
Trigger: CCCACAGCCACCACCTGTCCAGCACAGACTTCCCTG...CAAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GAATCTTTGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCAGAAATGGGCAAGCGATGACCAGTaGAATTGCGATGCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: ESLAAKGRIFSAGRQQKWASDDQ*NCDAGD
Trigger: GTCCCCAGCATCGCAATTCCACTGGTCATCGCTTGC...CCATTTCTGCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCAAAGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTTACAACATTGCTCACTaGGCTGGTGCTCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: GNAESILFMSLSALGPGSYNIAH*AGAQGA
Trigger: AGCTCCCTGAGCACCAGCCCAGTGAGCAATGTTGTA...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp CGTTTTGAAATATTCACTCCATATATGACATGGAGTGAAGCTGCCACCTATTTTCCATGCCGCAGGCAGTaGGGGCCGGGAAGCCCTCAG +
Preference number: 4 (lower is better)
Translates to: RFEIFTPYMTWSEAATYFPCRRQ*GPGSPQ
Trigger: CTGAGGGCTTCCCGGCCCCCACTGCCTGCGGCATGG...AAAATAGGTGGCAGCTTCACTCCATGTCATATATGGAGTGAATATTTCAAAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp CACTACCAGTCTACCACCAGAATCAATGTATACAGCCCTGGGGATGACCATGTGACCATGGGTCTGATCTaGCCCTTCATGGGGATGAAC +
Preference number: 4 (lower is better)
Translates to: HYQSTTRINVYSPGDDHVTMGLI*PFMGMN
Trigger: GTTCATCCCCATGAAGGGCCAGATCAGACCCATGGT...CACATGGTCATCCCCAGGGCTGTATACATTGATTCTGGTGGTAGACTGGTAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp CTTTATTGGATACACCGGGTGTGGGATTTACAAATAGGACCAACAATGTGTGCGGGTGTGAGCTGGGCTTaGGGACCATCTGAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LYWIHRVWDLQIGPTMCAGVSWA*GPSEEA
Trigger: TGCCTCCTCAGATGGTCCCCAAGCCCAGCTCACACC...CGCACACATTGTTGGTCCTATTTGTAAATCCCACACCCGGTGTATCCAATAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GTGGGATTTACAAATAGGACCAACAATGTGTGCGGGGCACAGACGGCTGCCTGTCAAACCAAGACCAACTaGATCCCAACGTGGGTAACA +
Preference number: 4 (lower is better)
Translates to: VGFTNRTNNVCGAQTAACQTKTN*IPTWVT
Trigger: TGTTACCCACGTTGGGATCCAGTTGGTCTTGGTTTG...ACAGGCAGCCGTCTGTGCCCCGCACACATTGTTGGTCCTATTTGTAAATCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp CCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTGCTAAATTTGTTTCACTTTATTaGATACACCGGGTGTGGGAT +
Preference number: 4 (lower is better)
Translates to: PQQAAEGSLRSSESLAAKFVSLY*IHRVWD
Trigger: ATCCCACACCCGGTGTATCCAATAAAGTGAAACAAA...TTTAGCAGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTCTGGATTCGCAGTCGTaGACCATATTCTGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: GNAESILFMSLSALGPGSLDSQS*TIFCLP
Trigger: CGGAAGACAGAATATGGTTCACGACTGCGAATCCAG...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR TCA 90 bp TGCACGTGGTACAGAGAGAAGCAAACCAAGACCAACTGGATCCCAACGTGGGTATCTGTAATCCATGCCTaGGCCGTTATAGCACTGATG +
Preference number: 4 (lower is better)
Translates to: CTWYREKQTKTNWIPTWVSVIHA*AVIALM
Trigger: CATCAGTGCTATAACGGCTCAGGCATGGATTACAGA...TACCCACGTTGGGATCCAGTTGGTCTTGGTTTGCTTCTCTCTGTACCACGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp CATAAAAATATTCATGGGGCTTCCTCTTCCAACCACATGAAGCCAGAATGGACATCCAGCACTCGATCATaGGGGCATACACCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: HKNIHGASSSNHMKPEWTSSTRS*GHTPRR
Trigger: CCGCCTGGGTGTATGCCCTCATGATCGAGTGCTGGA...TGTCCATTCTGGCTTCATGTGGTTGGAAGAGGAAGCCCCATGAATATTTTTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR TCA 90 bp GTGGGATTTACAAATAGGACCAACAATGTGTGCGGGGCACAGACGGCTGCCTGTGGCTCTTGTGATTGCTaGGTATGGTGTCTTCTCAAA +
Preference number: 4 (lower is better)
Translates to: VGFTNRTNNVCGAQTAACGSCDC*VWCLLK
Trigger: TTTGAGAAGACACCATACTCAGCAATCACAAGAGCC...ACAGGCAGCCGTCTGTGCCCCGCACACATTGTTGGTCCTATTTGTAAATCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp CATAAAAATATTCATGGGGCTTCCTCTTCCAACCACATGAAGCCAGAATGGACAGAGCGTCTCCCAGCCTaGGACTGTCCCGATTCTCAC +
Preference number: 4 (lower is better)
Translates to: HKNIHGASSSNHMKPEWTERLPA*DCPDSH
Trigger: GTGAGAATCGGGACAGTCGCAGGCTGGGAGACGCTC...TGTCCATTCTGGCTTCATGTGGTTGGAAGAGGAAGCCCCATGAATATTTTTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTCGTACGTTTTTATTCTaGGTAAAGCACCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GNAESILFMSLSALGPGSRTFLF*VKHQGP
Trigger: GGGCCCCTGGTGCTTTACGCAGAATAAAAACGTACG...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp CAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATCGTCACACAGTTCCATaGGTACGTTTTTATTCTGCG +
Preference number: 4 (lower is better)
Translates to: QQRAASVPANLWLLKGEYRHTVP*VRFYSA
Trigger: CGCAGAATAAAAACGTACGCATGGAACTGTGTGACG...ATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTGCATCCTTACAACATTaGTCACTGGGCTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: GNAESILFMSLSALGPGSASLQH*SLGWCS
Trigger: TGAGCACCAGCCCAGTGAGCAATGTTGTAAGGATGC...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp ACATGGAGTGAAGCTGCCACCTATTTTCTTGAAAGGCATTTGCTGCTCACTACCGAGGTGCCTCCTCGCTaGCTTTTGCAGGCCCTTATT +
Preference number: 4 (lower is better)
Translates to: TWSEAATYFLERHLLLTTEVPPR*LLQALI
Trigger: AATAAGGGCCTGCAAAAGGCAGCGAGGAGGCACCTC...GGTAGTGAGCAGCAAATGCCTTTCAAGAAAATAGGTGGCAGCTTCACTCCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GAAGGCACACATTTTGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTTGTCATTTGGGCTGTGCGTTaGACCCAGCCGCACAAACAG +
Preference number: 4 (lower is better)
Translates to: EGTHFVVSQELPFQKPLVIWAVR*TQPHKQ
Trigger: CTGTTTGTGCGGCTGGGTCCAACGCACAGCCCAAAT...GACAAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GAAGGCACACATTTTGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTTGTCTTTCCATGTCTTGGCTaGGCGAGGCCATCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: EGTHFVVSQELPFQKPLVFPCLG*ARPSAV
Trigger: GACAGCTGATGGCCTCGCCCAGCCAAGACATGGAAA...GACAAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp CATAAAAATATTCATGGGGCTTCCTCTTCCAACCACATGAAGCCAGAATGGACAATCATGCTCAGGGGCTaGTCCTTGGTCACCACGCCC +
Preference number: 4 (lower is better)
Translates to: HKNIHGASSSNHMKPEWTIMLRG*SLVTTP
Trigger: GGGCGTGGTGACCAAGGACCAGCCCCTGAGCATGAT...TGTCCATTCTGGCTTCATGTGGTTGGAAGAGGAAGCCCCATGAATATTTTTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp CATAAAAATATTCATGGGGCTTCCTCTTCCAACCACATGAAGCCAGAATGGACATGGTGCTCAGGGAGCTaGTCTGCGTGGTGTTGCTGG +
Preference number: 4 (lower is better)
Translates to: HKNIHGASSSNHMKPEWTWCSGS*SAWCCW
Trigger: CCAGCAACACCACGCAGACCAGCTCCCTGAGCACCA...TGTCCATTCTGGCTTCATGTGGTTGGAAGAGGAAGCCCCATGAATATTTTTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp TATGGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGCCACAACAAAGCGTTTaGCGTCTCCGTCATCCAGCA +
Preference number: 4 (lower is better)
Translates to: YGNAESILFMSLSALGPGPQQSV*RLRHPA
Trigger: TGCTGGATGACGGAGACGCCAAACGCTTTGTTGTGG...CCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp CATAAAAATATTCATGGGGCTTCCTCTTCCAACCACATGAAGCCAGAATGGACACAGGCTGGGGTCCCGTaGCATAACGCGAAAGTCGGT +
Preference number: 4 (lower is better)
Translates to: HKNIHGASSSNHMKPEWTQAGVP*HNAKVG
Trigger: ACCGACTTTCGCGTTATGCCACGGGACCCCAGCCTG...TGTCCATTCTGGCTTCATGTGGTTGGAAGAGGAAGCCCCATGAATATTTTTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp TTGAAGGCACACATTTTGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTTGGCTCACATTGCTCACTaGGCTGGTGCTCAGGGAGCT +
Preference number: 4 (lower is better)
Translates to: LKAHILLYLRNSHFRSPLAHIAH*AGAQGA
Trigger: AGCTCCCTGAGCACCAGCCCAGTGAGCAATGTGAGC...CAAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp TATGGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGAATCTGCTGTTGATGTaGAGTGGCCAAGCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: YGNAESILFMSLSALGPGNLLLM*SGQARG
Trigger: ACCACGAGCTTGGCCACTTCACATCAACAGCAGATT...CCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR TCA 90 bp TTTGAAGGCACACATTTTGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTTCTTCTCAAAGGTGACTaGGGTCCCTGTGGGGTCTCG +
Preference number: 4 (lower is better)
Translates to: FEGTHFVVSQELPFQKPLLLKGD*GPCGVS
Trigger: CGAGACCCCACAGGGACCTCAGTCACCTTTGAGAAG...AAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp GTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCTGCCACCTATTTTCTTaGAAGGCATTTGCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: VPANLWLLKGEYSQQGGSCHLFS*KAFAAH
Trigger: GTGAGCAGCAAATGCCTTTCAAGAAAATAGGTGGCA...GCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp TATGGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGCCAGTGGAATTGCGATaGTGGGGACCAAGATGTACA +
Preference number: 4 (lower is better)
Translates to: YGNAESILFMSLSALGPGPVELR*WGPRCT
Trigger: TGTACATCTTGGTCCCCAGCATCGCAATTCCACTGG...CCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp CATAAAAATATTCATGGGGCTTCCTCTTCCAACCACATGAAGCCAGAATGGACAACGACGTTGGGGTGTTaGAGCCGTGCTCGCAGCATA +
Preference number: 4 (lower is better)
Translates to: HKNIHGASSSNHMKPEWTTTLGC*SRARSI
Trigger: TATGCTGCGAGCACGGCTGCAACACCCCAACGTCGT...TGTCCATTCTGGCTTCATGTGGTTGGAAGAGGAAGCCCCATGAATATTTTTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp CGTTTTGAAATATTCACTCCATATATGACATGGAGTGAAGCTGCCACCTATTTTGGTCATCATCGGTGCTaGCCACGTCCGAGTGCGGCG +
Preference number: 4 (lower is better)
Translates to: RFEIFTPYMTWSEAATYFGHHRC*PRPSAA
Trigger: CGCCGCACTCGGACGTGGGCAGCACCGATGATGACC...AAAATAGGTGGCAGCTTCACTCCATGTCATATATGGAGTGAATATTTCAAAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp CAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATTTCTTGAAAGGCATTTaGTGCTCACTACCAGTCTAC +
Preference number: 4 (lower is better)
Translates to: QQRAASVPANLWLLKGEYFLKGI*CSLPVY
Trigger: GTAGACTGGTAGTGAGCAGCAAATGCCTTTCAAGAA...ATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTCTGAAAGTTATGATTTaGGCTGTGCGTTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: GNAESILFMSLSALGPGSLKVMI*AVRWTQ
Trigger: CTGGGTCCAACGCACAGCCCAAATCATAACTTTCAG...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp AAAATGAATGGACCTCATGTGCACGTGGTACAGAGAGAAGCAAACCAAGACCAACCGAGCTGTTGTAGTTaGAAAGGTTGCCCCAGGCTC +
Preference number: 4 (lower is better)
Translates to: KMNGPHVHVVQREANQDQPSCCS*KGCPRL
Trigger: GAGCCTGGGGCAACCTTTCCAACTACAACAGCTCGG...TTGGTCTTGGTTTGCTTCTCTCTGTACCACGTGCACATGAGGTCCATTCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp CATAAAAATATTCATGGGGCTTCCTCTTCCAACCACATGAAGCCAGAATGGACACATTGCTCACTGGGCTaGTGCTCAGGGAGCTGGTCT +
Preference number: 4 (lower is better)
Translates to: HKNIHGASSSNHMKPEWTHCSLG*CSGSWS
Trigger: AGACCAGCTCCCTGAGCACCAGCCCAGTGAGCAATG...TGTCCATTCTGGCTTCATGTGGTTGGAAGAGGAAGCCCCATGAATATTTTTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR TCA 90 bp TATGGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGGGCCTTGGACAATGGTaGTATTGTTTACTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: YGNAESILFMSLSALGPGGLGQW*YCLLAP
Trigger: TGGAGCCAGTAAACAATATCACCATTGTCCAAGGCC...CCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCCATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR TCA 90 bp ACATGGAGTGAAGCTGCCACCTATTTTCTTGAAAGGCATTTGCTGCTCACTACCCTGGATTCGCAGTCGTaGACCATATTCTGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: TWSEAATYFLERHLLLTTLDSQS*TIFCLP
Trigger: CGGAAGACAGAATATGGTTCACGACTGCGAATCCAG...GGTAGTGAGCAGCAAATGCCTTTCAAGAAAATAGGTGGCAGCTTCACTCCATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAAAAGCCAGAATGGACATaGAACTTCTTCCCATTTCAA +
Preference number: 4 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKKPEWT*NFFPFQ
Trigger: TTGAAATGGGAAGAAGTTTCATGTCCATTCTGGCTT...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp CATTTGCTGCTCACTACCAGTCTACCACCAGAATCAATGTATACAGCCCTGGGGTTCCTCTGTAATCCATaGCTGAGCCGTTATAGCACT +
Preference number: 4 (lower is better)
Translates to: HLLLTTSLPPESMYTALGFLCNP*LSRYST
Trigger: AGTGCTATAACGGCTCAGGCATGGATTACAGAGGAA...CCCCAGGGCTGTATACATTGATTCTGGTGGTAGACTGGTAGTGAGCAGCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTTTCCTCTGTAATCCATaGCTGAGCCGTTATAGCACT +
Preference number: 4 (lower is better)
Translates to: GNAESILFMSLSALGPGSFLCNP*LSRYST
Trigger: AGTGCTATAACGGCTCAGGCATGGATTACAGAGGAA...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp TTTGAAGGCACACATTTTGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTTCGGTGTGGACGCAGATaGCTTCTGCTTATTCCGGCA +
Preference number: 4 (lower is better)
Translates to: FEGTHFVVSQELPFQKPLRCGRR*LLLIPA
Trigger: TGCCGGAATAAGCAGAAGGCATCTGCGTCCACACCG...AAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp CATAAAAATATTCATGGGGCTTCCTCTTCCAACCACATGAAGCCAGAATGGACACGTACACTAGCACATTaGGGGTGGCCAGGTCCTTGT +
Preference number: 4 (lower is better)
Translates to: HKNIHGASSSNHMKPEWTRTLAH*GWPGPC
Trigger: ACAAGGACCTGGCCACCCGCAATGTGCTAGTGTACG...TGTCCATTCTGGCTTCATGTGGTTGGAAGAGGAAGCCCCATGAATATTTTTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp CATAAAAATATTCATGGGGCTTCCTCTTCCAACCACATGAAGCCAGAATGGACAAGCACTGCCTCCCGCTaGCTCGCATCCTTACAACAT +
Preference number: 4 (lower is better)
Translates to: HKNIHGASSSNHMKPEWTSTASR*LASLQH
Trigger: ATGTTGTAAGGATGCGAGGCAGCGGGAGGCAGTGCT...TGTCCATTCTGGCTTCATGTGGTTGGAAGAGGAAGCCCCATGAATATTTTTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp CATAAAAATATTCATGGGGCTTCCTCTTCCAACCACATGAAGCCAGAATGGACAGTTCATGAGTCTGAGTaGTCTGGGCCCAGGGTCTGT +
Preference number: 4 (lower is better)
Translates to: HKNIHGASSSNHMKPEWTVHESE*SGPRVC
Trigger: ACAGACCCTGGGCCCAGAGCACTCAGACTCATGAAC...TGTCCATTCTGGCTTCATGTGGTTGGAAGAGGAAGCCCCATGAATATTTTTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp GAATCTTTGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCAGAAATGGTGCAGAATTGCCGTCTaGCCTTGGACAATGGTGATA +
Preference number: 4 (lower is better)
Translates to: ESLAAKGRIFSAGRQQKWCRIAV*PWTMVI
Trigger: TATCACCATTGTCCAAGGCCAGACGGCAATTCTGCA...CCATTTCTGCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCAAAGATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp TATGGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGGTGGAATTGCGATGCTaGGGACCAAGATGTACAGAA +
Preference number: 4 (lower is better)
Translates to: YGNAESILFMSLSALGPGVELRC*GPRCTE
Trigger: TTCTGTACATCTTGGTCCCCAGCATCGCAATTCCAC...CCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp CACTACCAGTCTACCACCAGAATCAATGTATACAGCCCTGGGGATGACCATGTGTGGATACACCGGGTGTaGGATTTACAAATAGGACCA +
Preference number: 4 (lower is better)
Translates to: HYQSTTRINVYSPGDDHVWIHRV*DLQIGP
Trigger: TGGTCCTATTTGTAAATCCCACACCCGGTGTATCCA...CACATGGTCATCCCCAGGGCTGTATACATTGATTCTGGTGGTAGACTGGTAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp CATAAAAATATTCATGGGGCTTCCTCTTCCAACCACATGAAGCCAGAATGGACAGTAGGACCAGATGTCTaGGTCGATGGAGAACTTGCC +
Preference number: 4 (lower is better)
Translates to: HKNIHGASSSNHMKPEWTVGPDV*VDGELA
Trigger: GGCAAGTTCTCCATCGACTCAGACATCTGGTCCTAC...TGTCCATTCTGGCTTCATGTGGTTGGAAGAGGAAGCCCCATGAATATTTTTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR TCA 90 bp TTGAAGGCACACATTTTGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTTGACAGGGGCTGTAAAATaGATGGACCTCATGTGCACG +
Preference number: 4 (lower is better)
Translates to: LKAHILLYLRNSHFRSPLTGAVK*MDLMCT
Trigger: CGTGCACATGAGGTCCATTCATTTTACAGCCCCTGT...CAAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp TTGAAGGCACACATTTTGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTTGCGTACGTTTTTATTCTaGGTAAAGCACCAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: LKAHILLYLRNSHFRSPLRTFLF*VKHQGP
Trigger: GGGCCCCTGGTGCTTTACGCAGAATAAAAACGTACG...CAAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp TATGGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGAGTTTGGCCTGTTTGTaGTGGTTAATGAGGGGCATT +
Preference number: 4 (lower is better)
Translates to: YGNAESILFMSLSALGPGSLACL*WLMRGI
Trigger: AATGCCCCTCATTAACCAGCACAAACAGGCCAAACT...CCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp CGTTTTGAAATATTCACTCCATATATGACATGGAGTGAAGCTGCCACCTATTTTCCACCTCACCCAGTCTaGAAACAAGCCCACTGGCCG +
Preference number: 4 (lower is better)
Translates to: RFEIFTPYMTWSEAATYFPPHPV*KQAHWP
Trigger: CGGCCAGTGGGCTTGTTTGCAGACTGGGTGAGGTGG...AAAATAGGTGGCAGCTTCACTCCATGTCATATATGGAGTGAATATTTCAAAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp CGTTTTGAAATATTCACTCCATATATGACATGGAGTGAAGCTGCCACCTATTTTGATGACCATGTGTCCTaGTCCCCAGGACGCCGTGCT +
Preference number: 4 (lower is better)
Translates to: RFEIFTPYMTWSEAATYFDDHVS*SPGRRA
Trigger: AGCACGGCGTCCTGGGGAGCAGGACACATGGTCATC...AAAATAGGTGGCAGCTTCACTCCATGTCATATATGGAGTGAATATTTCAAAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTATTGCCGTCTGGCCTTaGACAATGGTGATATTGTTT +
Preference number: 4 (lower is better)
Translates to: GNAESILFMSLSALGPGSIAVWP*TMVILF
Trigger: AAACAATATCACCATTGTCCAAGGCCAGACGGCAAT...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTGGCACTCAACAGCACTaGGGCATCCATAAAAATATT +
Preference number: 4 (lower is better)
Translates to: GNAESILFMSLSALGPGSGTQQH*GIHKNI
Trigger: AATATTTTTATGGATGCCCCAGTGCTGTTGAGTGCC...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp CGTTTTGAAATATTCACTCCATATATGACATGGAGTGAAGCTGCCACCTATTTTGCTTCCAGCTGGACTTaGGCCTCGTCCACCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RFEIFTPYMTWSEAATYFASSWT*ASSTCR
Trigger: TCTGCAGGTGGACGAGGCCCAAGTCCAGCTGGAAGC...AAAATAGGTGGCAGCTTCACTCCATGTCATATATGGAGTGAATATTTCAAAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp CACTACCAGTCTACCACCAGAATCAATGTATACAGCCCTGGGGATGACCATGTGACTCCATATATGACATaGAGTGAAGCTGCCACCTAT +
Preference number: 4 (lower is better)
Translates to: HYQSTTRINVYSPGDDHVTPYMT*SEAATY
Trigger: ATAGGTGGCAGCTTCACTCCATGTCATATATGGAGT...CACATGGTCATCCCCAGGGCTGTATACATTGATTCTGGTGGTAGACTGGTAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp CACTACCAGTCTACCACCAGAATCAATGTATACAGCCCTGGGGATGACCATGTGGTTCCAGCGAATCTTTaGCTGCTAAAGGGAGAATAT +
Preference number: 4 (lower is better)
Translates to: HYQSTTRINVYSPGDDHVVPANL*LLKGEY
Trigger: ATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAAC...CACATGGTCATCCCCAGGGCTGTATACATTGATTCTGGTGGTAGACTGGTAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp AAAATGAATGGACCTCATGTGCACGTGGTACAGAGAGAAGCAAACCAAGACCAAGGCCTTGGACAATGGTaGTATTGTTTACTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: KMNGPHVHVVQREANQDQGLGQW*YCLLAP
Trigger: TGGAGCCAGTAAACAATATCACCATTGTCCAAGGCC...TTGGTCTTGGTTTGCTTCTCTCTGTACCACGTGCACATGAGGTCCATTCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp CATAAAAATATTCATGGGGCTTCCTCTTCCAACCACATGAAGCCAGAATGGACAGAAGAGGCCCAAGTCTaGGATCTTCACGTTCAGCTT +
Preference number: 4 (lower is better)
Translates to: HKNIHGASSSNHMKPEWTEEAQV*DLHVQL
Trigger: AAGCTGAACGTGAAGATCTCAGACTTGGGCCTCTTC...TGTCCATTCTGGCTTCATGTGGTTGGAAGAGGAAGCCCCATGAATATTTTTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp CATAAAAATATTCATGGGGCTTCCTCTTCCAACCACATGAAGCCAGAATGGACAGACGCAGATGCCTTCTaGTTATTCCGGCACATGCAA +
Preference number: 4 (lower is better)
Translates to: HKNIHGASSSNHMKPEWTDADAF*LFRHMQ
Trigger: TTGCATGTGCCGGAATAAGCAGAAGGCATCTGCGTC...TGTCCATTCTGGCTTCATGTGGTTGGAAGAGGAAGCCCCATGAATATTTTTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp AAAATGAATGGACCTCATGTGCACGTGGTACAGAGAGAAGCAAACCAAGACCAAGTGGAATTGCGATGCTaGGGACCAAGATGTACAGAA +
Preference number: 4 (lower is better)
Translates to: KMNGPHVHVVQREANQDQVELRC*GPRCTE
Trigger: TTCTGTACATCTTGGTCCCCAGCATCGCAATTCCAC...TTGGTCTTGGTTTGCTTCTCTCTGTACCACGTGCACATGAGGTCCATTCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp CGTTTTGAAATATTCACTCCATATATGACATGGAGTGAAGCTGCCACCTATTTTGTAACCTTTCAGAGTTaGAATCGGGCCGTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: RFEIFTPYMTWSEAATYFVTFQS*NRAVLP
Trigger: GGGCAGGACGGCCCGATTCCAACTCTGAAAGGTTAC...AAAATAGGTGGCAGCTTCACTCCATGTCATATATGGAGTGAATATTTCAAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CCA 90 bp CATAAAAATATTCATGGGGCTTCCTCTTCCAACCACATGAAGCCAGAATGGACATTGGCCTGTTTGTGCTaGTTAATGAGGGGCATTTCC +
Preference number: 4 (lower is better)
Translates to: HKNIHGASSSNHMKPEWTLACLC*LMRGIS
Trigger: GGAAATGCCCCTCATTAACCAGCACAAACAGGCCAA...TGTCCATTCTGGCTTCATGTGGTTGGAAGAGGAAGCCCCATGAATATTTTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR TCA 90 bp TTGAAGGCACACATTTTGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTTGTATTCACTCCATATATaGCATGGAGTGAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LKAHILLYLRNSHFRSPLYSLHI*HGVKLP
Trigger: TGGCAGCTTCACTCCATGTCATATATGGAGTGAATA...CAAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp CATAAAAATATTCATGGGGCTTCCTCTTCCAACCACATGAAGCCAGAATGGACACGTCACACAGTTCCATaGGTACGTTTTTATTCTGCG +
Preference number: 4 (lower is better)
Translates to: HKNIHGASSSNHMKPEWTRHTVP*VRFYSA
Trigger: CGCAGAATAAAAACGTACGCATGGAACTGTGTGACG...TGTCCATTCTGGCTTCATGTGGTTGGAAGAGGAAGCCCCATGAATATTTTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR GCA 90 bp CATAAAAATATTCATGGGGCTTCCTCTTCCAACCACATGAAGCCAGAATGGACAGCTTATTCCGGCACATaGAAACCAAGAAGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: HKNIHGASSSNHMKPEWTAYSGT*KPRRKG
Trigger: GCCTTTTCTTCTTGGTTTGCATGTGCCGGAATAAGC...TGTCCATTCTGGCTTCATGTGGTTGGAAGAGGAAGCCCCATGAATATTTTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CCA 90 bp CTTTATTGGATACACCGGGTGTGGGATTTACAAATAGGACCAACAATGTGTGCGATTGCCGTCTGGCCTTaGACAATGGTGATATTGTTT +
Preference number: 4 (lower is better)
Translates to: LYWIHRVWDLQIGPTMCAIAVWP*TMVILF
Trigger: AAACAATATCACCATTGTCCAAGGCCAGACGGCAAT...CGCACACATTGTTGGTCCTATTTGTAAATCCCACACCCGGTGTATCCAATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp TTGAAGGCACACATTTTGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTTGATATATGACATGGAGTaGAGCTGCCACCTATTTTCT +
Preference number: 4 (lower is better)
Translates to: LKAHILLYLRNSHFRSPLIYDME*SCHLFS
Trigger: AGAAAATAGGTGGCAGCTTCACTCCATGTCATATAT...CAAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR CAA 72 bp AATACAAAGCTGTCAGTTTCTTTGAAGGCACACATTTaGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCC +
Preference number: 4 (lower is better)
Translates to: NTKLSVSLKAHI*LYLRNSHFRSP
Trigger: GGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTCAAAGAAACTGACAGCTTTGTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR GCA 90 bp CGTTTTGAAATATTCACTCCATATATGACATGGAGTGAAGCTGCCACCTATTTTGCTTATTCCGGCACATaGAAACCAAGAAGAAAAGGC +
Preference number: 4 (lower is better)
Translates to: RFEIFTPYMTWSEAATYFAYSGT*KPRRKG
Trigger: GCCTTTTCTTCTTGGTTTGCATGTGCCGGAATAAGC...AAAATAGGTGGCAGCTTCACTCCATGTCATATATGGAGTGAATATTTCAAAACG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR TCA 90 bp CGTTTTGAAATATTCACTCCATATATGACATGGAGTGAAGCTGCCACCTATTTTCAATACTGCTTCCTCTaGACATTCCAAACCCAAGAA +
Preference number: 4 (lower is better)
Translates to: RFEIFTPYMTWSEAATYFQYCFL*TFQTQE
Trigger: TTCTTGGGTTTGGAATGTTCAGAGGAAGCAGTATTG...AAAATAGGTGGCAGCTTCACTCCATGTCATATATGGAGTGAATATTTCAAAACG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
3UTR CAA 72 bp AAAACCATTTCACCAAATACAAAGCTGTCAGTTTCTTaGAAGGCACACATTTTGTTGTATCTCAGGAACTCC +
Preference number: 4 (lower is better)
Translates to: KTISPNTKLSVS*KAHILLYLRNS
Trigger: GGAGTTCCTGAGATACAACAAAATGTGTGCCTTCAAAGAAACTGACAGCTTTGTATTTGGTGAAATGGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS CCA 90 bp TTCTCCGGCCCGGATGCGCCGCTCGGCTCCGGCCACGGCAAGGGCTaGCTGGGGAGGTTCCTTGGCGCGGGCTGGGGCGTCCCGCCGGCC +
Preference number: 5 (lower is better)
Translates to: FSGPDAPLGSGHGKG*LGRFLGAGWGVPPA
Trigger: GGCCGGCGGGACGCCCCAGCCCGCGCCAAGGAACCTCCCCAGCCAGCCCTTGCCGTGGCCGGAGCCGAGCGGCGCATCCGGGCCGGAGAA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS GCA 90 bp GGTCCACTTCGAGGACCTCGTCGTCGTCCTCTTCTCCGGCCCGGATaGGCCGCTCGGCTCCGGCCACGGCAAGGGCTGGCTGGGGAGGTT +
Preference number: 5 (lower is better)
Translates to: GPLRGPRRRPLLRPG*AARLRPRQGLAGEV
Trigger: AACCTCCCCAGCCAGCCCTTGCCGTGGCCGGAGCCGAGCGGCGCATCCGGGCCGGAGAAGAGGACGACGACGAGGTCCTCGAAGTGGACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS GCA 90 bp GGTCACCACGCCCAGCAGGCAGACGACGTTGGGGTGTTGCAGCCGTaGTCGCAGCATAGCCTCATGCCGGAACTCCTCCCGCAGGGGCCC +
Preference number: 5 (lower is better)
Translates to: GHHAQQADDVGVLQP*SQHSLMPELLPQGP
Trigger: GGGCCCCTGCGGGAGGAGTTCCGGCATGAGGCTATGCTGCGAGCACGGCTGCAACACCCCAACGTCGTCTGCCTGCTGGGCGTGGTGACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS CCA 90 bp AGCCGCATGAGGATGAGCGGGTTGGAGCGGGCGATGGTGTACTCCTaGCGGCACAGGTCGCTCTCCAGCACCTCGCACTCGTCGCGGCAC +
Preference number: 5 (lower is better)
Translates to: SRMRMSGLERAMVYS*RHRSLSSTSHSSRH
Trigger: GTGCCGCGACGAGTGCGAGGTGCTGGAGAGCGACCTGTGCCGCCAGGAGTACACCATCGCCCGCTCCAACCCGCTCATCCTCATGCGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS CCA 90 bp GGTAGCGGCCCAGCCTCTCGGCTGGGATGCCAATGCGCATGCAGTTaGCAGCGTCGGGGCTCTCAGGCATGGGCAGCGCCTCACACTTGG +
Preference number: 5 (lower is better)
Translates to: GSGPASRLGCQCACS*QRRGSQAWAAPHTW
Trigger: CCAAGTGTGAGGCGCTGCCCATGCCTGAGAGCCCCGACGCTGCCAACTGCATGCGCATTGGCATCCCAGCCGAGAGGCTGGGCCGCTACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS TCA 90 bp GCGTCGGGGCTCTCAGGCATGGGCAGCGCCTCACACTTGGGCAGCTaGAGCCGCATGAGGATGAGCGGGTTGGAGCGGGCGATGGTGTAC +
Preference number: 5 (lower is better)
Translates to: ASGLSGMGSASHLGS*SRMRMSGLERAMVY
Trigger: GTACACCATCGCCCGCTCCAACCCGCTCATCCTCATGCGGCTTCAGCTGCCCAAGTGTGAGGCGCTGCCCATGCCTGAGAGCCCCGACGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS GCA 90 bp ACTGATGGTAGCGGCCCAGCCTCTCGGCTGGGATGCCAATGCGCATaGAGTTGGCAGCGTCGGGGCTCTCAGGCATGGGCAGCGCCTCAC +
Preference number: 5 (lower is better)
Translates to: TDGSGPASRLGCQCA*SWQRRGSQAWAAPH
Trigger: GTGAGGCGCTGCCCATGCCTGAGAGCCCCGACGCTGCCAACTGCATGCGCATTGGCATCCCAGCCGAGAGGCTGGGCCGCTACCATCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS GCA 90 bp TGGTCCTTGGTCACCACGCCCAGCAGGCAGACGACGTTGGGGTGTTaGAGCCGTGCTCGCAGCATAGCCTCATGCCGGAACTCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: WSLVTTPSRQTTLGC*SRARSIASCRNSSR
Trigger: GCGGGAGGAGTTCCGGCATGAGGCTATGCTGCGAGCACGGCTGCAACACCCCAACGTCGTCTGCCTGCTGGGCGTGGTGACCAAGGACCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS GCA 90 bp GCGGACTTCACCGTGCGGTCATCATCGGTGCTGCCCACGTCCGAGTaGGGCGAGCGCATGACCAGGAATTCGTGGAGGTCGCCGTGCGAA +
Preference number: 5 (lower is better)
Translates to: ADFTVRSSSVLPTSE*GERMTRNSWRSPCE
Trigger: TTCGCACGGCGACCTCCACGAATTCCTGGTCATGCGCTCGCCGCACTCGGACGTGGGCAGCACCGATGATGACCGCACGGTGAAGTCCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS CCA 90 bp GGCGCCACCACCCCTTTCTACGATGCGTCCGCTCCTCCTTCTCCCTaGCGCTTCGCAAACGGGTCCACTTCGAGGACCTCGTCGTCGTCC +
Preference number: 5 (lower is better)
Translates to: GATTPFYDASAPPSP*RFANGSTSRTSSSS
Trigger: GGACGACGACGAGGTCCTCGAAGTGGACCCGTTTGCGAAGCGCCAGGGAGAAGGAGGAGCGGACGCATCGTAGAAAGGGGTGGTGGCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS CCA 90 bp CTTCTGCTTGGGCCCCACGTAGCGGGCGTTGCTCACATTGCTCACTaGGCTGGTGCTCAGGGAGCTGGTCTGCGTGGTGTTGCTGGCCCC +
Preference number: 5 (lower is better)
Translates to: LLLGPHVAGVAHIAH*AGAQGAGLRGVAGP
Trigger: GGGGCCAGCAACACCACGCAGACCAGCTCCCTGAGCACCAGCCCAGTGAGCAATGTGAGCAACGCCCGCTACGTGGGGCCCAAGCAGAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375708.4
ENST00000550066.5
CDS-3UTR CAA 90 bp GGAGCAGGGCTCCACCTCACCCAGTCTGCAAACAAGCCCACTGGCCGGCGGGCTGGGCATTTCCATGTCTaGGCTGGGCGAGGCCATCAG +
Preference number: 5 (lower is better)
Translates to: GAGLHLTQSANKPTGRRAGHFHV*AGRGHQ
Trigger: CTGATGGCCTCGCCCAGCCAAGACATGGAAATGCCC...AGCCCGCCGGCCAGTGGGCTTGTTTGCAGACTGGGTGAGGTGGAGCCCTGCTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS GCA 90 bp TATAGCACTGATGGTAGCGGCCCAGCCTCTCGGCTGGGATGCCAATaGGCATGCAGTTGGCAGCGTCGGGGCTCTCAGGCATGGGCAGCG +
Preference number: 5 (lower is better)
Translates to: YSTDGSGPASRLGCQ*ACSWQRRGSQAWAA
Trigger: CGCTGCCCATGCCTGAGAGCCCCGACGCTGCCAACTGCATGCGCATTGGCATCCCAGCCGAGAGGCTGGGCCGCTACCATCAGTGCTATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS-3UTR CAA 90 bp AAGCCCCTTGTCTTCCGACCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCAGCTTCCAGCTGGACTaGGGCCTCGTCCACCTGCAG +
Preference number: 5 (lower is better)
Translates to: KPLVFRPQQAAEGSLRSSSFQLD*GLVHLQ
Trigger: CTGCAGGTGGACGAGGCCCAAGTCCAGCTGGAAGCT...GCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGGTCGGAAGACAAGGGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS GCA 90 bp AGCCGTTATAGCACTGATGGTAGCGGCCCAGCCTCTCGGCTGGGATaGCAATGCGCATGCAGTTGGCAGCGTCGGGGCTCTCAGGCATGG +
Preference number: 5 (lower is better)
Translates to: SRYSTDGSGPASRLG*QCACSWQRRGSQAW
Trigger: CCATGCCTGAGAGCCCCGACGCTGCCAACTGCATGCGCATTGGCATCCCAGCCGAGAGGCTGGGCCGCTACCATCAGTGCTATAACGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS GCA 90 bp AGGGCATACACCCAGGCGGGACAGTCATCGGGGCAAGGCAGCACCTaGCGGTTCCGGATCATCTCCACCACATCCTGGTTGGAGTACCCG +
Preference number: 5 (lower is better)
Translates to: RAYTQAGQSSGQGST*RFRIISTTSWLEYP
Trigger: CGGGTACTCCAACCAGGATGTGGTGGAGATGATCCGGAACCGGCAGGTGCTGCCTTGCCCCGATGACTGTCCCGCCTGGGTGTATGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS CCA 90 bp GGCTTGGGTGTCCGGGAGCGCGCGTCGCACAGAGGAAACACGAAGTaGCAGAAGGATGGGATGGCGAACTGTGAGCACTGGTCCGACAGG +
Preference number: 5 (lower is better)
Translates to: GLGVRERASHRGNTK*QKDGMANCEHWSDR
Trigger: CCTGTCGGACCAGTGCTCACAGTTCGCCATCCCATCCTTCTGCCACTTCGTGTTTCCTCTGTGCGACGCGCGCTCCCGGACACCCAAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS GCA 90 bp CCTGGTGCCACTCAAGCTTCCAGCTGGACTTGGGCCTCGTCCACCTaGAGAGTGTCACAGTCCCCCAGCAGCTCAGTCTCTGGGACAGAG +
Preference number: 5 (lower is better)
Translates to: PGATQASSWTWASST*RVSQSPSSSVSGTE
Trigger: CTCTGTCCCAGAGACTGAGCTGCTGGGGGACTGTGACACTCTGCAGGTGGACGAGGCCCAAGTCCAGCTGGAAGCTTGAGTGGCACCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375708.4
ENST00000550066.5
CDS CCA 90 bp GTGTCGTTCTTCAGGTGGCAGAAGTGTTGGGTCAACTGTCCTGTGTaGCTCCTTGGGCCGGCTAGGGCGGCAGGCCAGGATACCTGGAGC +
Preference number: 5 (lower is better)
Translates to: VSFFRWQKCWVNCPV*LLGPARAAGQDTWS
Trigger: GCTCCAGGTATCCTGGCCTGCCGCCCTAGCCGGCCCAAGGAGCCACACAGGACAGTTGACCCAACACTTCTGCCACCTGAAGAACGACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493846.1
ENST00000495386.5
ENST00000546883.1
CDS-3UTR CAA 90 bp GAAGTGGCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCTGGTCTGCGTGGTGTaGCTGGCCCCCGAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: EVAKLVVVLIGTQQHWGILVCVV*LAPEVC
Trigger: GCAGACCTCGGGGGCCAGCAACACCACGCAGACCAG...GATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGCCACTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp ACAGACCAGATCGGTTGTCAGGAACCTCAAGACCCGAGGTGCCTCCTCGCTGCCTCTGCCATGGATGTGTaGGAGGGGGCCGTGGTGACG +
Preference number: 5 (lower is better)
Translates to: TDQIGCQEPQDPRCLLAASAMDV*EGAVVT
Trigger: CGTCACCACGGCCCCCTCCAACACATCCATGGCAGA...GGCAGCGAGGAGGCACCTCGGGTCTTGAGGTTCCTGACAACCGATCTGGTCTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS TCA 90 bp TTGCTAGGACCCCTGCGGTCGAGGGCCTTGGGTTGCTACTCCAGGTaGCAGCCTCCCATCCTAGGCAAAGGGTACATTCGTGGGGAGGAG +
Preference number: 5 (lower is better)
Translates to: LLGPLRSRALGCYSR*QPPILGKGYIRGEE
Trigger: CTCCTCCCCACGAATGTACCCTTTGCCTAGGATGGGAGGCTGTCACCTGGAGTAGCAACCCAAGGCCCTCGACCGCAGGGGTCCTAGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550066.5
CDS GCA 90 bp TGCTCTGGGCCCAGGGTCTGTCATGCGGTTGAAGTCACATGGCAGTaGAGGCTGGGGTCCCGTGGCATAACGCGAAAGTCGGTGGCTTCA +
Preference number: 5 (lower is better)
Translates to: CSGPRVCHAVEVTWQ*RLGSRGITRKSVAS
Trigger: TGAAGCCACCGACTTTCGCGTTATGCCACGGGACCCCAGCCTGCACTGCCATGTGACTTCAACCGCATGACAGACCCTGGGCCCAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS CCA 90 bp TCTGAGTGCTCTGGGCCCAGGGTCTGTCATGCGGTTGAAGTCACATaGCAGTGCAGGCTGGGGTCCCGTGGCATAACGCGAAAGTCGGTG +
Preference number: 5 (lower is better)
Translates to: SECSGPRVCHAVEVT*QCRLGSRGITRKSV
Trigger: CACCGACTTTCGCGTTATGCCACGGGACCCCAGCCTGCACTGCCATGTGACTTCAACCGCATGACAGACCCTGGGCCCAGAGCACTCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS CCA 90 bp GTGTCGTTCTTCAGGTGGCAGAAGTGTTGGGTCAACTGTCCTGTGTaGCTCCTGAAGTCCGGGACACTGAGAGCAGAAGCGCGGCGGCCG +
Preference number: 5 (lower is better)
Translates to: VSFFRWQKCWVNCPV*LLKSGTLRAEARRP
Trigger: CGGCCGCCGCGCTTCTGCTCTCAGTGTCCCGGACTTCAGGAGCCACACAGGACAGTTGACCCAACACTTCTGCCACCTGAAGAACGACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476440.1
CDS-3UTR CAA 90 bp GAAGTGGCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCAACCTCCACTTCACCTaGGGCCGGCTAGGGCGGCAG +
Preference number: 5 (lower is better)
Translates to: EVAKLVVVLIGTQQHWGINLHFT*GRLGRQ
Trigger: CTGCCGCCCTAGCCGGCCCAAGGTGAAGTGGAGGTT...GATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGCCACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp TGCACGTGGTACAGAGAGAAGCAAACCAAGACCAACTGGATCCCAACGTGGGTACACAGCTCACGCGGCTaGGGTGTCCGGGAGCGCGCG +
Preference number: 5 (lower is better)
Translates to: CTWYREKQTKTNWIPTWVHSSRG*GVRERA
Trigger: CGCGCGCTCCCGGACACCCAAGCCGCGTGAGCTGTG...TACCCACGTTGGGATCCAGTTGGTCTTGGTTTGCTTCTCTCTGTACCACGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CAA 90 bp TTCCGACCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTCACTGGTGGCCTGACTaGGTGGTGCTTGCCGTTCCT +
Preference number: 5 (lower is better)
Translates to: FRPQQAAEGSLRSSESLAHWWPD*VVLAVP
Trigger: AGGAACGGCAAGCACCACCAAGTCAGGCCACCAGTG...AGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGGTCGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CAA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAACGGCTGTGGATGTCCTaGAAGCGGGGCCGCCGGCTG +
Preference number: 5 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKRLWMS*KRGRRL
Trigger: CAGCCGGCGGCCCCGCTTCAAGGACATCCACAGCCG...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS GCA 90 bp GGCATTTCCATGTCTTGGCTGGGCGAGGCCATCAGCTGTCGCCGCTaGGGTGTGGACGCAGATGCCTTCTGCTTATTCCGGCACATGCAA +
Preference number: 5 (lower is better)
Translates to: GISMSWLGEAISCRR*GVDADAFCLFRHMQ
Trigger: TTGCATGTGCCGGAATAAGCAGAAGGCATCTGCGTCCACACCGCAGCGGCGACAGCTGATGGCCTCGCCCAGCCAAGACATGGAAATGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS GCA 90 bp ATCCCGAGTGAGGCCGCTTTCAACTTCTCTGGCTCCCAGAGCAGATaGACAAAGGCAAGGCTTGCTAGGACCCCTGCGGTCGAGGGCCTT +
Preference number: 5 (lower is better)
Translates to: IPSEAAFNFSGSQSR*TKARLARTPAVEGL
Trigger: AAGGCCCTCGACCGCAGGGGTCCTAGCAAGCCTTGCCTTTGTGCATCTGCTCTGGGAGCCAGAGAAGTTGAAAGCGGCCTCACTCGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550066.5
CDS CCA 90 bp CCATGTCTTGGCTGGGCGAGGCCATCAGCTGTCGCCGCTGCGGTGTaGACGCAGATGCCTTCTGCTTATTCCGGCACATGCAAACCAAGA +
Preference number: 5 (lower is better)
Translates to: PCLGWARPSAVAAAV*TQMPSAYSGTCKPR
Trigger: TCTTGGTTTGCATGTGCCGGAATAAGCAGAAGGCATCTGCGTCCACACCGCAGCGGCGACAGCTGATGGCCTCGCCCAGCCAAGACATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS-3UTR CAA 90 bp GAAGTGGCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCGACGACGTTGGGGTGTaGCAGCCGTGCTCGCAGCAT +
Preference number: 5 (lower is better)
Translates to: EVAKLVVVLIGTQQHWGIDDVGV*QPCSQH
Trigger: ATGCTGCGAGCACGGCTGCAACACCCCAACGTCGTC...GATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGCCACTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp GTGGGATTTACAAATAGGACCAACAATGTGTGCGGGGCACAGACGGCTGCCTGTCTGGTCTGCGTGGTGTaGCTGGCCCCCGAGGTCTGC +
Preference number: 5 (lower is better)
Translates to: VGFTNRTNNVCGAQTAACLVCVV*LAPEVC
Trigger: GCAGACCTCGGGGGCCAGCAACACCACGCAGACCAG...ACAGGCAGCCGTCTGTGCCCCGCACACATTGTTGGTCCTATTTGTAAATCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS GCA 90 bp CGTGAACCATATTCTGTCTTCCGGATGATGATCCGCCGCGGCTCCTaGACCACCGGGGCATCATTCTTTAGCCACCGCACGTTAGGGGGT +
Preference number: 5 (lower is better)
Translates to: REPYSVFRMMIRRGS*TTGASFFSHRTLGG
Trigger: ACCCCCTAACGTGCGGTGGCTAAAGAATGATGCCCCGGTGGTGCAGGAGCCGCGGCGGATCATCATCCGGAAGACAGAATATGGTTCACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000495386.5
ENST00000550066.5
CDS GCA 90 bp ACTGGTGGCCTGACTTGGTGGTGCTTGCCGTTCCTCTGTAATCCATaGCTGAGCCGTTATAGCACTGATGGTAGCGGCCCAGCCTCTCGG +
Preference number: 5 (lower is better)
Translates to: TGGLTWWCLPFLCNP*LSRYSTDGSGPASR
Trigger: CCGAGAGGCTGGGCCGCTACCATCAGTGCTATAACGGCTCAGGCATGGATTACAGAGGAACGGCAAGCACCACCAAGTCAGGCCACCAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS GCA 90 bp GCTGGGCGAGGCCATCAGCTGTCGCCGCTGCGGTGTGGACGCAGATaGCTTCTGCTTATTCCGGCACATGCAAACCAAGAAGAAAAGGCA +
Preference number: 5 (lower is better)
Translates to: AGRGHQLSPLRCGRR*LLLIPAHANQEEKA
Trigger: TGCCTTTTCTTCTTGGTTTGCATGTGCCGGAATAAGCAGAAGGCATCTGCGTCCACACCGCAGCGGCGACAGCTGATGGCCTCGCCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS CCA 90 bp AGTTTGGCCTGTTTGTGCTGGTTAATGAGGGGCATTTCCATGTCTTaGCTGGGCGAGGCCATCAGCTGTCGCCGCTGCGGTGTGGACGCA +
Preference number: 5 (lower is better)
Translates to: SLACLCWLMRGISMS*LGEAISCRRCGVDA
Trigger: TGCGTCCACACCGCAGCGGCGACAGCTGATGGCCTCGCCCAGCCAAGACATGGAAATGCCCCTCATTAACCAGCACAAACAGGCCAAACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS CCA 90 bp CCGGCAGGAACCAACTCCAGACACATTATGCCACAACAAAGCGTTTaGCGTCTCCGTCATCCAGCACTGCCTCCCGCTGCCTCGCATCCT +
Preference number: 5 (lower is better)
Translates to: PAGTNSRHIMPQQSV*RLRHPALPPAASHP
Trigger: AGGATGCGAGGCAGCGGGAGGCAGTGCTGGATGACGGAGACGCCAAACGCTTTGTTGTGGCATAATGTGTCTGGAGTTGGTTCCTGCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS CCA 90 bp AGAGATGGAGGAATGCAGGTGTCGTTCTTCAGGTGGCAGAAGTGTTaGGTCAACTGTCCTGTGTGGCTCCTTGGGCCGGCTAGGGCGGCA +
Preference number: 5 (lower is better)
Translates to: RDGGMQVSFFRWQKC*VNCPVWLLGPARAA
Trigger: TGCCGCCCTAGCCGGCCCAAGGAGCCACACAGGACAGTTGACCCAACACTTCTGCCACCTGAAGAACGACACCTGCATTCCTCCATCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493846.1
ENST00000495386.5
ENST00000546883.1
CDS-3UTR CAA 90 bp ACAGACCAGATCGGTTGTCAGGAACCTCAAGACCCGAGGTGCCTCCTCGCTGCCAGTAACCTTTCAGAGTaGGAATCGGGCCGTCCTGCC +
Preference number: 5 (lower is better)
Translates to: TDQIGCQEPQDPRCLLAASNLSE*ESGRPA
Trigger: GGCAGGACGGCCCGATTCCAACTCTGAAAGGTTACT...GGCAGCGAGGAGGCACCTCGGGTCTTGAGGTTCCTGACAACCGATCTGGTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS CCA 90 bp CTTGGTGGTCCCAGAGATGGAGGAATGCAGGTGTCGTTCTTCAGGTaGCAGAAGTGTTGGGTCAACTGTCCTGTGTGGCTCCTTGGGCCG +
Preference number: 5 (lower is better)
Translates to: LGGPRDGGMQVSFFR*QKCWVNCPVWLLGP
Trigger: CGGCCCAAGGAGCCACACAGGACAGTTGACCCAACACTTCTGCCACCTGAAGAACGACACCTGCATTCCTCCATCTCTGGGACCACCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493846.1
ENST00000495386.5
ENST00000546883.1
CDS-3UTR CAA 90 bp GAAGTGGCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCGGGTTTCCTGCCACCTaGCAGTGCAGAATTGCCGTC +
Preference number: 5 (lower is better)
Translates to: EVAKLVVVLIGTQQHWGIGFPAT*QCRIAV
Trigger: GACGGCAATTCTGCACTGCAAGGTGGCAGGAAACCC...GATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGCCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp GTGGGATTTACAAATAGGACCAACAATGTGTGCGGGGCACAGACGGCTGCCTGTGACGACGTTGGGGTGTaGCAGCCGTGCTCGCAGCAT +
Preference number: 5 (lower is better)
Translates to: VGFTNRTNNVCGAQTAACDDVGV*QPCSQH
Trigger: ATGCTGCGAGCACGGCTGCAACACCCCAACGTCGTC...ACAGGCAGCCGTCTGTGCCCCGCACACATTGTTGGTCCTATTTGTAAATCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS TCA 90 bp GTAGTAGCCAGTGTCTGTCGTGTCCAGGTCCTGGATTCGCAGTCGTaGACCATATTCTGTCTTCCGGATGATGATCCGCCGCGGCTCCTG +
Preference number: 5 (lower is better)
Translates to: VVASVCRVQVLDSQS*TIFCLPDDDPPRLL
Trigger: CAGGAGCCGCGGCGGATCATCATCCGGAAGACAGAATATGGTTCACGACTGCGAATCCAGGACCTGGACACGACAGACACTGGCTACTAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000495386.5
ENST00000550066.5
CDS GCA 90 bp GAGGCCATCAGCTGTCGCCGCTGCGGTGTGGACGCAGATGCCTTCTaGTTATTCCGGCACATGCAAACCAAGAAGAAAAGGCAAGCGATG +
Preference number: 5 (lower is better)
Translates to: EAISCRRCGVDADAF*LFRHMQTKKKRQAM
Trigger: CATCGCTTGCCTTTTCTTCTTGGTTTGCATGTGCCGGAATAAGCAGAAGGCATCTGCGTCCACACCGCAGCGGCGACAGCTGATGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS-3UTR CAA 90 bp CCTCAAACCAACAGACCAGATCGGTTGTCAGGAACCTCAAGACCCGAGGTGCCTGATTTGGGCTGTGCGTaGGACCCAGCCGCACAAACA +
Preference number: 5 (lower is better)
Translates to: PQTNRPDRLSGTSRPEVPDLGCA*DPAAQT
Trigger: TGTTTGTGCGGCTGGGTCCAACGCACAGCCCAAATC...AGGCACCTCGGGTCTTGAGGTTCCTGACAACCGATCTGGTCTGTTGGTTTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CAA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAACACTGGTGGCCTGACTaGGTGGTGCTTGCCGTTCCT +
Preference number: 5 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKHWWPD*VVLAVP
Trigger: AGGAACGGCAAGCACCACCAAGTCAGGCCACCAGTG...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp AAGCCCCTTGTCTTCCGACCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCCTGATCTCTTTGAGTTaGGCCTGTTTGTGCTGGTTA +
Preference number: 5 (lower is better)
Translates to: KPLVFRPQQAAEGSLRSSLISLS*ACLCWL
Trigger: TAACCAGCACAAACAGGCCAAACTCAAAGAGATCAG...GCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGGTCGGAAGACAAGGGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CAA 90 bp GAAGTGGCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCGGGTCTGTCATGCGGTaGAAGTCACATGGCAGTGCA +
Preference number: 5 (lower is better)
Translates to: EVAKLVVVLIGTQQHWGIGSVMR*KSHGSA
Trigger: TGCACTGCCATGTGACTTCAACCGCATGACAGACCC...GATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGCCACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp GTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCCGGGCGTTGCTCACATaGCTCACTGGGCTGGTGCTC +
Preference number: 5 (lower is better)
Translates to: VPANLWLLKGEYSQQGGSRALLT*LTGLVL
Trigger: GAGCACCAGCCCAGTGAGCAATGTGAGCAACGCCCG...GCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CAA 90 bp GTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCGCGGGGCCATCTGCATaGGGATCTGCACCGGGTAGA +
Preference number: 5 (lower is better)
Translates to: VPANLWLLKGEYSQQGGSAGPSA*GSAPGR
Trigger: TCTACCCGGTGCAGATCCCAATGCAGATGGCCCCGC...GCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS GCA 90 bp CCGCACGTTAGGGGGTGGGTTTCCTGCCACCTTGCAGTGCAGAATTaGCGTCTGGCCTTGGACAATGGTGATATTGTTTACTGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: PHVRGWVSCHLAVQN*RLALDNGDIVYWLQ
Trigger: CTGGAGCCAGTAAACAATATCACCATTGTCCAAGGCCAGACGGCAATTCTGCACTGCAAGGTGGCAGGAAACCCACCCCCTAACGTGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000495386.5
ENST00000546883.1
ENST00000548585.2
ENST00000550066.5
CDS GCA 90 bp ACATTATGCCACAACAAAGCGTTTGGCGTCTCCGTCATCCAGCACTaGCTCCCGCTGCCTCGCATCCTTACAACATTGCTCACTGGGCTG +
Preference number: 5 (lower is better)
Translates to: TLCHNKAFGVSVIQH*LPLPRILTTLLTGL
Trigger: CAGCCCAGTGAGCAATGTTGTAAGGATGCGAGGCAGCGGGAGGCAGTGCTGGATGACGGAGACGCCAAACGCTTTGTTGTGGCATAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS CCA 90 bp CTTGGTGGTCCCAGAGATGGAGGAATGCAGGTGTCGTTCTTCAGGTaGCAGAAGTGTTGGGTCAACTGTCCTGTGTGGCTCCTGAAGTCC +
Preference number: 5 (lower is better)
Translates to: LGGPRDGGMQVSFFR*QKCWVNCPVWLLKS
Trigger: GGACTTCAGGAGCCACACAGGACAGTTGACCCAACACTTCTGCCACCTGAAGAACGACACCTGCATTCCTCCATCTCTGGGACCACCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476440.1
CDS-3UTR CAA 90 bp CATAAAAATATTCATGGGGCTTCCTCTTCCAACCACATGAAGCCAGAATGGACACACAGCTCACGCGGCTaGGGTGTCCGGGAGCGCGCG +
Preference number: 5 (lower is better)
Translates to: HKNIHGASSSNHMKPEWTHSSRG*GVRERA
Trigger: CGCGCGCTCCCGGACACCCAAGCCGCGTGAGCTGTG...TGTCCATTCTGGCTTCATGTGGTTGGAAGAGGAAGCCCCATGAATATTTTTATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp CATTTGCTGCTCACTACCAGTCTACCACCAGAATCAATGTATACAGCCCTGGGGCCAATGCGCATGCAGTaGGCAGCGTCGGGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: HLLLTTSLPPESMYTALGPMRMQ*AASGLS
Trigger: TGAGAGCCCCGACGCTGCCAACTGCATGCGCATTGG...CCCCAGGGCTGTATACATTGATTCTGGTGGTAGACTGGTAGTGAGCAGCAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CAA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTAGCAGGCAGACGACGTaGGGGTGTTGCAGCCGTGCT +
Preference number: 5 (lower is better)
Translates to: GNAESILFMSLSALGPGSSRQTT*GCCSRA
Trigger: AGCACGGCTGCAACACCCCAACGTCGTCTGCCTGCT...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAAGCCACAACAAAGCGTTaGGCGTCTCCGTCATCCAGC +
Preference number: 5 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKATTKR*ASPSSS
Trigger: GCTGGATGACGGAGACGCCAAACGCTTTGTTGTGGC...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp GAAGTGGCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCAAGCTCGTGGTGGTGTaGATAGGCACTCAACAGCAC +
Preference number: 5 (lower is better)
Translates to: EVAKLVVVLIGTQQHWGIKLVVV*IGTQQH
Trigger: GTGCTGTTGAGTGCCTATCAACACCACCACGAGCTT...GATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGCCACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp CCTCAAACCAACAGACCAGATCGGTTGTCAGGAACCTCAAGACCCGAGGTGCCTCATTTCAGAAGCCCCTaGTCTTCCGACCCCAACAGG +
Preference number: 5 (lower is better)
Translates to: PQTNRPDRLSGTSRPEVPHFRSP*SSDPNR
Trigger: CCTGTTGGGGTCGGAAGACAAGGGGCTTCTGAAATG...AGGCACCTCGGGTCTTGAGGTTCCTGACAACCGATCTGGTCTGTTGGTTTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS CCA 90 bp AGAGATGGAGGAATGCAGGTGTCGTTCTTCAGGTGGCAGAAGTGTTaGGTCAACTGTCCTGTGTGGCTCCTGAAGTCCGGGACACTGAGA +
Preference number: 5 (lower is better)
Translates to: RDGGMQVSFFRWQKC*VNCPVWLLKSGTLR
Trigger: TCTCAGTGTCCCGGACTTCAGGAGCCACACAGGACAGTTGACCCAACACTTCTGCCACCTGAAGAACGACACCTGCATTCCTCCATCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476440.1
CDS-3UTR CAA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAAAGTAACCTTTCAGAGTaGGAATCGGGCCGTCCTGCC +
Preference number: 5 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKSNLSE*ESGRPA
Trigger: GGCAGGACGGCCCGATTCCAACTCTGAAAGGTTACT...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTATGAGGATGAGCGGGTaGGAGCGGGCGATGGTGTAC +
Preference number: 5 (lower is better)
Translates to: GNAESILFMSLSALGPGSMRMSG*ERAMVY
Trigger: GTACACCATCGCCCGCTCCAACCCGCTCATCCTCAT...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp GAAGTGGCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCGACAGGCTGATCTCTTaGAGTTTGGCCTGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: EVAKLVVVLIGTQQHWGIDRLIS*SLACLC
Trigger: GCACAAACAGGCCAAACTCAAAGAGATCAGCCTGTC...GATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGCCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp GAATCTTTGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCAGAAATGGAGCAGGCAGACGACGTaGGGGTGTTGCAGCCGTGCT +
Preference number: 5 (lower is better)
Translates to: ESLAAKGRIFSAGRQQKWSRQTT*GCCSRA
Trigger: AGCACGGCTGCAACACCCCAACGTCGTCTGCCTGCT...CCATTTCTGCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCAAAGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CAA 90 bp TTTGAAGGCACACATTTTGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTTCGGCTGTGGATGTCCTaGAAGCGGGGCCGCCGGCTG +
Preference number: 5 (lower is better)
Translates to: FEGTHFVVSQELPFQKPLRLWMS*KRGRRL
Trigger: CAGCCGGCGGCCCCGCTTCAAGGACATCCACAGCCG...AAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CAA 90 bp TTCCGACCCCAACAGGCAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTCTTTGTTTCACTTTATaGGATACACCGGGTGTGGGA +
Preference number: 5 (lower is better)
Translates to: FRPQQAAEGSLRSSESLALCFTL*DTPGVG
Trigger: TCCCACACCCGGTGTATCCAATAAAGTGAAACAAAG...AGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTGCCTGTTGGGGTCGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CAA 90 bp TTCATCCTCAAACCAACAGACCAGATCGGTTGTCAGGAACCTCAAGACCCGAGGCCTTGCAGTGCAGAATaGCCGTCTGGCCTTGGACAA +
Preference number: 5 (lower is better)
Translates to: FILKPTDQIGCQEPQDPRPCSAE*PSGLGQ
Trigger: TTGTCCAAGGCCAGACGGCAATTCTGCACTGCAAGG...CCTCGGGTCTTGAGGTTCCTGACAACCGATCTGGTCTGTTGGTTTGAGGATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CAA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTGATTTGGGCTGTGCGTaGGACCCAGCCGCACAAACA +
Preference number: 5 (lower is better)
Translates to: GNAESILFMSLSALGPGSDLGCA*DPAAQT
Trigger: TGTTTGTGCGGCTGGGTCCAACGCACAGCCCAAATC...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAATACAGAATCCCCATCTaGCTGCTGTCTCGGGGACTA +
Preference number: 5 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKYRIPI*LLSRGL
Trigger: TAGTCCCCGAGACAGCAGCAAGATGGGGATTCTGTA...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp TATGGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGGGGCATTTCCATGTCTaGGCTGGGCGAGGCCATCAG +
Preference number: 5 (lower is better)
Translates to: YGNAESILFMSLSALGPGGHFHV*AGRGHQ
Trigger: CTGATGGCCTCGCCCAGCCAAGACATGGAAATGCCC...CCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCCATA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTTCGTACACTAGCACATaGCGGGTGGCCAGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: GNAESILFMSLSALGPGSSYTST*RVARSL
Trigger: CAAGGACCTGGCCACCCGCAATGTGCTAGTGTACGA...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp AAATGGAGCCCCTTCATCCTCAAACCAACAGACCAGATCGGTTGTCAGGAACCTCCTCCTCGCTGCCTTTaGCAGGCCCTTATTCCCAAC +
Preference number: 5 (lower is better)
Translates to: KWSPFILKPTDQIGCQEPPPRCL*QALIPN
Trigger: GTTGGGAATAAGGGCCTGCAAAAGGCAGCGAGGAGG...AGGTTCCTGACAACCGATCTGGTCTGTTGGTTTGAGGATGAAGGGGCTCCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CAA 90 bp TGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCAGAAATGGAGCCCCTAACAGACCAGATCGGTaGTCAGGAACCTCAAGACCC +
Preference number: 5 (lower is better)
Translates to: WLLKGEYSQQGGSRNGAPNRPDR*SGTSRP
Trigger: GGGTCTTGAGGTTCCTGACAACCGATCTGGTCTGTT...AGGGGCTCCATTTCTGCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS GCA 90 bp TTTAGCCACCGCACGTTAGGGGGTGGGTTTCCTGCCACCTTGCAGTaGAGAATTGCCGTCTGGCCTTGGACAATGGTGATATTGTTTACT +
Preference number: 5 (lower is better)
Translates to: FSHRTLGGGFPATLQ*RIAVWPWTMVILFT
Trigger: AGTAAACAATATCACCATTGTCCAAGGCCAGACGGCAATTCTGCACTGCAAGGTGGCAGGAAACCCACCCCCTAACGTGCGGTGGCTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000495386.5
ENST00000546883.1
ENST00000548585.2
ENST00000550066.5
CDS-3UTR CAA 90 bp GCCAAGCTCGTGGTGGTGTTGATAGGCACTCAACAGCACTGGGGCATCCATAAACCTGAAAGTTATGATTaGGGCTGTGCGTTGGACCCA +
Preference number: 5 (lower is better)
Translates to: AKLVVVLIGTQQHWGIHKPESYD*GCALDP
Trigger: TGGGTCCAACGCACAGCCCAAATCATAACTTTCAGG...TTTATGGATGCCCCAGTGCTGTTGAGTGCCTATCAACACCACCACGAGCTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp CAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATGACAGGCTGATCTCTTaGAGTTTGGCCTGTTTGTGC +
Preference number: 5 (lower is better)
Translates to: QQRAASVPANLWLLKGEYDRLIS*SLACLC
Trigger: GCACAAACAGGCCAAACTCAAAGAGATCAGCCTGTC...ATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CAA 90 bp GAAGGCACACATTTTGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTTGTCGGGTTTCCTGCCACCTaGCAGTGCAGAATTGCCGTC +
Preference number: 5 (lower is better)
Translates to: EGTHFVVSQELPFQKPLVGFPAT*QCRIAV
Trigger: GACGGCAATTCTGCACTGCAAGGTGGCAGGAAACCC...GACAAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CAA 90 bp CTTTATTGGATACACCGGGTGTGGGATTTACAAATAGGACCAACAATGTGTGCGATGAGGATGAGCGGGTaGGAGCGGGCGATGGTGTAC +
Preference number: 5 (lower is better)
Translates to: LYWIHRVWDLQIGPTMCAMRMSG*ERAMVY
Trigger: GTACACCATCGCCCGCTCCAACCCGCTCATCCTCAT...CGCACACATTGTTGGTCCTATTTGTAAATCCCACACCCGGTGTATCCAATAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CAA 90 bp CATAAAAATATTCATGGGGCTTCCTCTTCCAACCACATGAAGCCAGAATGGACACCAATGCGCATGCAGTaGGCAGCGTCGGGGCTCTCA +
Preference number: 5 (lower is better)
Translates to: HKNIHGASSSNHMKPEWTPMRMQ*AASGLS
Trigger: TGAGAGCCCCGACGCTGCCAACTGCATGCGCATTGG...TGTCCATTCTGGCTTCATGTGGTTGGAAGAGGAAGCCCCATGAATATTTTTATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTCTGACTTGGTGGTGCTaGCCGTTCCTCTGTAATCCA +
Preference number: 5 (lower is better)
Translates to: GNAESILFMSLSALGPGSLTWWC*PFLCNP
Trigger: TGGATTACAGAGGAACGGCAAGCACCACCAAGTCAG...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp TATGGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTTGTCCTTCAGCGTTTaGATGGCCACAGCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: YGNAESILFMSLSALGPGLSFSV*MATAWV
Trigger: GACCCAGGCTGTGGCCATCAAAACGCTGAAGGACAA...CCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp ACATGGAGTGAAGCTGCCACCTATTTTCTTGAAAGGCATTTGCTGCTCACTACCTCGTACACTAGCACATaGCGGGTGGCCAGGTCCTTG +
Preference number: 5 (lower is better)
Translates to: TWSEAATYFLERHLLLTTSYTST*RVARSL
Trigger: CAAGGACCTGGCCACCCGCAATGTGCTAGTGTACGA...GGTAGTGAGCAGCAAATGCCTTTCAAGAAAATAGGTGGCAGCTTCACTCCATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CAA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTGAGTCGATGGAGAACTaGCCGTACATGATGGCCTCT +
Preference number: 5 (lower is better)
Translates to: GNAESILFMSLSALGPGSESMEN*PYMMAS
Trigger: AGAGGCCATCATGTACGGCAAGTTCTCCATCGACTC...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp TATGGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGCGCATCCTTACAACATaGCTCACTGGGCTGGTGCTC +
Preference number: 5 (lower is better)
Translates to: YGNAESILFMSLSALGPGRILTT*LTGLVL
Trigger: GAGCACCAGCCCAGTGAGCAATGTTGTAAGGATGCG...CCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS CCA 90 bp TTAGGGGGTGGGTTTCCTGCCACCTTGCAGTGCAGAATTGCCGTCTaGCCTTGGACAATGGTGATATTGTTTACTGGCTCCAGAAAATTC +
Preference number: 5 (lower is better)
Translates to: LGGGFPATLQCRIAV*PWTMVILFTGSRKF
Trigger: GAATTTTCTGGAGCCAGTAAACAATATCACCATTGTCCAAGGCCAGACGGCAATTCTGCACTGCAAGGTGGCAGGAAACCCACCCCCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000495386.5
ENST00000546883.1
ENST00000548585.2
ENST00000550066.5
CDS-3UTR CAA 90 bp CACTACCAGTCTACCACCAGAATCAATGTATACAGCCCTGGGGATGACCATGTGTTGAGTTTGGCCTGTTaGTGCTGGTTAATGAGGGGC +
Preference number: 5 (lower is better)
Translates to: HYQSTTRINVYSPGDDHVLSLAC*CWLMRG
Trigger: GCCCCTCATTAACCAGCACAAACAGGCCAAACTCAA...CACATGGTCATCCCCAGGGCTGTATACATTGATTCTGGTGGTAGACTGGTAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CAA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTTTGAGTTTGGCCTGTTaGTGCTGGTTAATGAGGGGC +
Preference number: 5 (lower is better)
Translates to: GNAESILFMSLSALGPGSLSLAC*CWLMRG
Trigger: GCCCCTCATTAACCAGCACAAACAGGCCAAACTCAA...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp GTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCCGTTCCAGCGAATCTTaGGCTGCTAAAGGGAGAATA +
Preference number: 5 (lower is better)
Translates to: VPANLWLLKGEYSQQGGSRSSES*AAKGRI
Trigger: TATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAACG...GCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CAA 90 bp CCTCAAACCAACAGACCAGATCGGTTGTCAGGAACCTCAAGACCCGAGGTGCCTAAGGCACACATTTTGTaGTATCTCAGGAACTCCCAT +
Preference number: 5 (lower is better)
Translates to: PQTNRPDRLSGTSRPEVPKAHIL*YLRNSH
Trigger: ATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTT...AGGCACCTCGGGTCTTGAGGTTCCTGACAACCGATCTGGTCTGTTGGTTTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS TCA 90 bp TCTGCTTATTCCGGCACATGCAAACCAAGAAGAAAAGGCAAGCGATaGCCAGTGGAATTGCGATGCTGGGGACCAAGATGTACAGAATCC +
Preference number: 5 (lower is better)
Translates to: SAYSGTCKPRRKGKR*PVELRCWGPRCTES
Trigger: GGATTCTGTACATCTTGGTCCCCAGCATCGCAATTCCACTGGTCATCGCTTGCCTTTTCTTCTTGGTTTGCATGTGCCGGAATAAGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS TCA 90 bp TTATCCAGGACTGTCGGGAAATACAACCTCTTCAAAAATCCCGAGTaGGGCCGCTTTCAACTTCTCTGGCTCCCAGAGCAGATGCACAAA +
Preference number: 5 (lower is better)
Translates to: LSRTVGKYNLFKNPE*GRFQLLWLPEQMHK
Trigger: TTTGTGCATCTGCTCTGGGAGCCAGAGAAGTTGAAAGCGGCCTCACTCGGGATTTTTGAAGAGGTTGTATTTCCCGACAGTCCTGGATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550066.5
CDS GCA 90 bp TATAAATACAGACCCAGAAGGGACTCCCCTGACAGTCAGACTGCCTaGCGTGTCTTTTATCCAGGACTGTCGGGAAATACAACCTCTTCA +
Preference number: 5 (lower is better)
Translates to: YKYRPRRDSPDSQTA*RVFYPGLSGNTTSS
Trigger: TGAAGAGGTTGTATTTCCCGACAGTCCTGGATAAAAGACACGGCAGGCAGTCTGACTGTCAGGGGAGTCCCTTCTGGGTCTGTATTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550066.5
CDS-3UTR CAA 90 bp TTGAAGGCACACATTTTGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTTGTTGTCCTTCAGCGTTTaGATGGCCACAGCCTGGGTC +
Preference number: 5 (lower is better)
Translates to: LKAHILLYLRNSHFRSPLLSFSV*MATAWV
Trigger: GACCCAGGCTGTGGCCATCAAAACGCTGAAGGACAA...CAAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CAA 90 bp GTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCATCTTCACGTTCAGCTaGTCGTACACTAGCACATTG +
Preference number: 5 (lower is better)
Translates to: VPANLWLLKGEYSQQGGSIFTFS*SYTSTL
Trigger: CAATGTGCTAGTGTACGACAAGCTGAACGTGAAGAT...GCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CAA 90 bp CAGCAGAGGGCAGCCTCCGTTCCAGCGAATCTTTGGCTGCTAAAGGGAGAATATTTGAAGGCACACATTTaGTTGTATCTCAGGAACTCC +
Preference number: 5 (lower is better)
Translates to: QQRAASVPANLWLLKGEYLKAHI*LYLRNS
Trigger: GGAGTTCCTGAGATACAACAAAATGTGTGCCTTCAA...ATATTCTCCCTTTAGCAGCCAAAGATTCGCTGGAACGGAGGCTGCCCTCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CAA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTAATTGCCGTCTGGCCTaGGACAATGGTGATATTGTT +
Preference number: 5 (lower is better)
Translates to: GNAESILFMSLSALGPGSNCRLA*DNGDIV
Trigger: AACAATATCACCATTGTCCAAGGCCAGACGGCAATT...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp CATAAAAATATTCATGGGGCTTCCTCTTCCAACCACATGAAGCCAGAATGGACACCTTGCAGTGCAGAATaGCCGTCTGGCCTTGGACAA +
Preference number: 5 (lower is better)
Translates to: HKNIHGASSSNHMKPEWTPCSAE*PSGLGQ
Trigger: TTGTCCAAGGCCAGACGGCAATTCTGCACTGCAAGG...TGTCCATTCTGGCTTCATGTGGTTGGAAGAGGAAGCCCCATGAATATTTTTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp AAAATGAATGGACCTCATGTGCACGTGGTACAGAGAGAAGCAAACCAAGACCAACTGACTTGGTGGTGCTaGCCGTTCCTCTGTAATCCA +
Preference number: 5 (lower is better)
Translates to: KMNGPHVHVVQREANQDQLTWWC*PFLCNP
Trigger: TGGATTACAGAGGAACGGCAAGCACCACCAAGTCAG...TTGGTCTTGGTTTGCTTCTCTCTGTACCACGTGCACATGAGGTCCATTCATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CAA 90 bp TTGAAGGCACACATTTTGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTTGTACAGAATCCCCATCTaGCTGCTGTCTCGGGGACTA +
Preference number: 5 (lower is better)
Translates to: LKAHILLYLRNSHFRSPLYRIPI*LLSRGL
Trigger: TAGTCCCCGAGACAGCAGCAAGATGGGGATTCTGTA...CAAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS CCA 90 bp TGTGAAGCCCAGCCAACTTCTAGCAAATTCGGCAAAGACATGAGCTaGCAGGATTTAAACCCCGGATTCCTACATAACAAAAACCCTCAG +
Preference number: 5 (lower is better)
Translates to: CEAQPTSSKFGKDMS*QDLNPGFLHNKNPQ
Trigger: CTGAGGGTTTTTGTTATGTAGGAATCCGGGGTTTAAATCCTGCCAGCTCATGTCTTTGCCGAATTTGCTAGAAGTTGGCTGGGCTTCACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548585.2
CDS CCA 90 bp TTCGGATCCAGAACCTCCACTTCACAAGGAAGGCCGTTTTCAGGATaGCATGGCTATCCGATGAGTCAGTATCTTTTTGATCTGAGAGAT +
Preference number: 5 (lower is better)
Translates to: FGSRTSTSQGRPFSG*HGYPMSQYLFDLRD
Trigger: ATCTCTCAGATCAAAAAGATACTGACTCATCGGATAGCCATGCCATCCTGAAAACGGCCTTCCTTGTGAAGTGGAGGTTCTGGATCCGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000546883.1
CDS-3UTR CAA 90 bp GAATCTTTGGCTGCTAAAGGGAGAATATTCTCAGCAGGGAGGCAGCAGAAATGGAATTGCCGTCTGGCCTaGGACAATGGTGATATTGTT +
Preference number: 5 (lower is better)
Translates to: ESLAAKGRIFSAGRQQKWNCRLA*DNGDIV
Trigger: AACAATATCACCATTGTCCAAGGCCAGACGGCAATT...CCATTTCTGCTGCCTCCCTGCTGAGAATATTCTCCCTTTAGCAGCCAAAGATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CAA 90 bp TATGGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGCTGATCTCTTTGAGTTaGGCCTGTTTGTGCTGGTTA +
Preference number: 5 (lower is better)
Translates to: YGNAESILFMSLSALGPGLISLS*ACLCWL
Trigger: TAACCAGCACAAACAGGCCAAACTCAAAGAGATCAG...CCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp TTTGAAGGCACACATTTTGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTTGAGTCGATGGAGAACTaGCCGTACATGATGGCCTCT +
Preference number: 5 (lower is better)
Translates to: FEGTHFVVSQELPFQKPLESMEN*PYMMAS
Trigger: AGAGGCCATCATGTACGGCAAGTTCTCCATCGACTC...AAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS TCA 90 bp CTGCCACCTTGCAGTGCAGAATTGCCGTCTGGCCTTGGACAATGGTaGTATTGTTTACTGGCTCCAGAAAATTCAGAAAGTAACCTTTCA +
Preference number: 5 (lower is better)
Translates to: LPPCSAELPSGLGQW*YCLLAPENSESNLS
Trigger: TGAAAGGTTACTTTCTGAATTTTCTGGAGCCAGTAAACAATATCACCATTGTCCAAGGCCAGACGGCAATTCTGCACTGCAAGGTGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000495386.5
ENST00000546883.1
ENST00000548585.2
ENST00000550066.5
CDS-3UTR CAA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTTGGACAATGGTGATATaGTTTACTGGCTCCAGAAAA +
Preference number: 5 (lower is better)
Translates to: GNAESILFMSLSALGPGSWTMVI*FTGSRK
Trigger: TTTTCTGGAGCCAGTAAACAATATCACCATTGTCCA...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp TTTGAAGGCACACATTTTGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTTCCTGAAAGTTATGATTaGGGCTGTGCGTTGGACCCA +
Preference number: 5 (lower is better)
Translates to: FEGTHFVVSQELPFQKPLPESYD*GCALDP
Trigger: TGGGTCCAACGCACAGCCCAAATCATAACTTTCAGG...AAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CAA 90 bp ACATGGAGTGAAGCTGCCACCTATTTTCTTGAAAGGCATTTGCTGCTCACTACCCTGCCACCTATTTTCTaGAAAGGCATTTGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: TWSEAATYFLERHLLLTTLPPIF*KGICCS
Trigger: TGAGCAGCAAATGCCTTTCAAGAAAATAGGTGGCAG...GGTAGTGAGCAGCAAATGCCTTTCAAGAAAATAGGTGGCAGCTTCACTCCATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS-3UTR CAA 90 bp GGGAATGCTGAATCTATTTTGTTCATGAGTCTGAGTGCTCTGGGCCCAGGGTCTAATGCTGAATCTATTTaGTTCATGAGTCTGAGTGCT +
Preference number: 5 (lower is better)
Translates to: GNAESILFMSLSALGPGSNAESI*FMSLSA
Trigger: AGCACTCAGACTCATGAACAAAATAGATTCAGCATT...AGACCCTGGGCCCAGAGCACTCAGACTCATGAACAAAATAGATTCAGCATTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp CATAAAAATATTCATGGGGCTTCCTCTTCCAACCACATGAAGCCAGAATGGACAATCTTCACGTTCAGCTaGTCGTACACTAGCACATTG +
Preference number: 5 (lower is better)
Translates to: HKNIHGASSSNHMKPEWTIFTFS*SYTSTL
Trigger: CAATGTGCTAGTGTACGACAAGCTGAACGTGAAGAT...TGTCCATTCTGGCTTCATGTGGTTGGAAGAGGAAGCCCCATGAATATTTTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS-3UTR CAA 90 bp TTGAAGGCACACATTTTGTTGTATCTCAGGAACTCCCATTTCAGAAGCCCCTTGTGGACAATGGTGATATaGTTTACTGGCTCCAGAAAA +
Preference number: 5 (lower is better)
Translates to: LKAHILLYLRNSHFRSPLWTMVI*FTGSRK
Trigger: TTTTCTGGAGCCAGTAAACAATATCACCATTGTCCA...CAAGGGGCTTCTGAAATGGGAGTTCCTGAGATACAACAAAATGTGTGCCTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS CCA 72 bp ATGCGCCGCTCGGCTCCGGCCACGGCAAGGGCTGGCTaGGGAGGTTCCTTGGCGCGGGCTGGGGCGTCCCGC +
Preference number: 6 (lower is better)
Translates to: MRRSAPATARAG*GGSLARAGASR
Trigger: GCGGGACGCCCCAGCCCGCGCCAAGGAACCTCCCCAGCCAGCCCTTGCCGTGGCCGGAGCCGAGCGGCGCAT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS GCA 72 bp CGAGGACCTCGTCGTCGTCCTCTTCTCCGGCCCGGATaGGCCGCTCGGCTCCGGCCACGGCAAGGGCTGGCT +
Preference number: 6 (lower is better)
Translates to: RGPRRRPLLRPG*AARLRPRQGLA
Trigger: AGCCAGCCCTTGCCGTGGCCGGAGCCGAGCGGCGCATCCGGGCCGGAGAAGAGGACGACGACGAGGTCCTCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS GCA 72 bp GGGCGCGGGGTCGGGCGCCACCACCCCTTTCTACGATaGGTCCGCTCCTCCTTCTCCCTGGCGCTTCGCAAA +
Preference number: 6 (lower is better)
Translates to: GRGVGRHHPFLR*VRSSFSLALRK
Trigger: TTTGCGAAGCGCCAGGGAGAAGGAGGAGCGGACGCATCGTAGAAAGGGGTGGTGGCGCCCGACCCCGCGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS CAA 72 bp AGCACCTCGCACTCGTCGCGGCACAGCTCACGCGGCTaGGGTGTCCGGGAGCGCGCGTCGCACAGAGGAAAC +
Preference number: 6 (lower is better)
Translates to: STSHSSRHSSRG*GVRERASHRGN
Trigger: GTTTCCTCTGTGCGACGCGCGCTCCCGGACACCCAAGCCGCGTGAGCTGTGCCGCGACGAGTGCGAGGTGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS CAA 72 bp CCCAGCCTCTCGGCTGGGATGCCAATGCGCATGCAGTaGGCAGCGTCGGGGCTCTCAGGCATGGGCAGCGCC +
Preference number: 6 (lower is better)
Translates to: PSLSAGMPMRMQ*AASGLSGMGSA
Trigger: GGCGCTGCCCATGCCTGAGAGCCCCGACGCTGCCAACTGCATGCGCATTGGCATCCCAGCCGAGAGGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS CAA 90 bp TCGCTCTCCAGCACCTCGCACTCGTCGCGGCACAGCTCACGCGGCTaGGGTGTCCGGGAGCGCGCGTCGCACAGAGGAAACACGAAGTGG +
Preference number: 6 (lower is better)
Translates to: SLSSTSHSSRHSSRG*GVRERASHRGNTKW
Trigger: CCACTTCGTGTTTCCTCTGTGCGACGCGCGCTCCCGGACACCCAAGCCGCGTGAGCTGTGCCGCGACGAGTGCGAGGTGCTGGAGAGCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS GCA 72 bp AGCGGCCCAGCCTCTCGGCTGGGATGCCAATGCGCATaGAGTTGGCAGCGTCGGGGCTCTCAGGCATGGGCA +
Preference number: 6 (lower is better)
Translates to: SGPASRLGCQCA*SWQRRGSQAWA
Trigger: TGCCCATGCCTGAGAGCCCCGACGCTGCCAACTGCATGCGCATTGGCATCCCAGCCGAGAGGCTGGGCCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS TCA 72 bp CTCTCAGGCATGGGCAGCGCCTCACACTTGGGCAGCTaGAGCCGCATGAGGATGAGCGGGTTGGAGCGGGCG +
Preference number: 6 (lower is better)
Translates to: LSGMGSASHLGS*SRMRMSGLERA
Trigger: CGCCCGCTCCAACCCGCTCATCCTCATGCGGCTTCAGCTGCCCAAGTGTGAGGCGCTGCCCATGCCTGAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS GCA 72 bp GATGGTAGCGGCCCAGCCTCTCGGCTGGGATGCCAATaGGCATGCAGTTGGCAGCGTCGGGGCTCTCAGGCA +
Preference number: 6 (lower is better)
Translates to: DGSGPASRLGCQ*ACSWQRRGSQA
Trigger: TGCCTGAGAGCCCCGACGCTGCCAACTGCATGCGCATTGGCATCCCAGCCGAGAGGCTGGGCCGCTACCATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS GCA 72 bp GCCCAGCAGGCAGACGACGTTGGGGTGTTGCAGCCGTaGTCGCAGCATAGCCTCATGCCGGAACTCCTCCCG +
Preference number: 6 (lower is better)
Translates to: AQQADDVGVLQP*SQHSLMPELLP
Trigger: CGGGAGGAGTTCCGGCATGAGGCTATGCTGCGAGCACGGCTGCAACACCCCAACGTCGTCTGCCTGCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS GCA 72 bp CTGGGCTGGTGCTCAGGGAGCTGGTCTGCGTGGTGTTaGTGGCCCCCGAGGTCTGCGCCGAGCTGTTGTAGT +
Preference number: 6 (lower is better)
Translates to: LGWCSGSWSAWC*WPPRSAPSCCS
Trigger: ACTACAACAGCTCGGCGCAGACCTCGGGGGCCAGCAACACCACGCAGACCAGCTCCCTGAGCACCAGCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS CCA 72 bp TGCGCATGCAGTTGGCAGCGTCGGGGCTCTCAGGCATaGGCAGCGCCTCACACTTGGGCAGCTGAAGCCGCA +
Preference number: 6 (lower is better)
Translates to: CACSWQRRGSQA*AAPHTWAAEAA
Trigger: TGCGGCTTCAGCTGCCCAAGTGTGAGGCGCTGCCCATGCCTGAGAGCCCCGACGCTGCCAACTGCATGCGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS CCA 72 bp TGCTGGCCCCCGAGGTCTGCGCCGAGCTGTTGTAGTTaGAAAGGTTGCCCCAGGCTCGGAGCCGGCTGTGGA +
Preference number: 6 (lower is better)
Translates to: CWPPRSAPSCCS*KGCPRLGAGCG
Trigger: TCCACAGCCGGCTCCGAGCCTGGGGCAACCTTTCCAACTACAACAGCTCGGCGCAGACCTCGGGGGCCAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS CCA 72 bp GGCTGGTGCTCAGGGAGCTGGTCTGCGTGGTGTTGCTaGCCCCCGAGGTCTGCGCCGAGCTGTTGTAGTTGG +
Preference number: 6 (lower is better)
Translates to: GWCSGSWSAWCC*PPRSAPSCCSW
Trigger: CCAACTACAACAGCTCGGCGCAGACCTCGGGGGCCAGCAACACCACGCAGACCAGCTCCCTGAGCACCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS CCA 72 bp CCGGGCCCTGGTGCCACTCAAGCTTCCAGCTGGACTTaGGCCTCGTCCACCTGCAGAGTGTCACAGTCCCCC +
Preference number: 6 (lower is better)
Translates to: PGPGATQASSWT*ASSTCRVSQSP
Trigger: GGGGGACTGTGACACTCTGCAGGTGGACGAGGCCCAAGTCCAGCTGGAAGCTTGAGTGGCACCAGGGCCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375708.4
ENST00000550066.5
CDS CAA 72 bp CCCGGGCCCTGGTGCCACTCAAGCTTCCAGCTGGACTaGGGCCTCGTCCACCTGCAGAGTGTCACAGTCCCC +
Preference number: 6 (lower is better)
Translates to: PGPWCHSSFQLD*GLVHLQSVTVP
Trigger: GGGGACTGTGACACTCTGCAGGTGGACGAGGCCCAAGTCCAGCTGGAAGCTTGAGTGGCACCAGGGCCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375708.4
ENST00000550066.5
CDS CAA 90 bp CTGGTCCTTGGTCACCACGCCCAGCAGGCAGACGACGTTGGGGTGTaGCAGCCGTGCTCGCAGCATAGCCTCATGCCGGAACTCCTCCCG +
Preference number: 6 (lower is better)
Translates to: LVLGHHAQQADDVGV*QPCSQHSLMPELLP
Trigger: CGGGAGGAGTTCCGGCATGAGGCTATGCTGCGAGCACGGCTGCAACACCCCAACGTCGTCTGCCTGCTGGGCGTGGTGACCAAGGACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS CAA 90 bp CTCAGGGGCTGGTCCTTGGTCACCACGCCCAGCAGGCAGACGACGTaGGGGTGTTGCAGCCGTGCTCGCAGCATAGCCTCATGCCGGAAC +
Preference number: 6 (lower is better)
Translates to: LRGWSLVTTPSRQTT*GCCSRARSIASCRN
Trigger: GTTCCGGCATGAGGCTATGCTGCGAGCACGGCTGCAACACCCCAACGTCGTCTGCCTGCTGGGCGTGGTGACCAAGGACCAGCCCCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS TCA 72 bp CATCGGTGCTGCCCACGTCCGAGTGCGGCGAGCGCATaGCCAGGAATTCGTGGAGGTCGCCGTGCGAACAGT +
Preference number: 6 (lower is better)
Translates to: HRCCPRPSAASA*PGIRGGRRANS
Trigger: ACTGTTCGCACGGCGACCTCCACGAATTCCTGGTCATGCGCTCGCCGCACTCGGACGTGGGCAGCACCGATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS GCA 72 bp AGCACTGATGGTAGCGGCCCAGCCTCTCGGCTGGGATaGCAATGCGCATGCAGTTGGCAGCGTCGGGGCTCT +
Preference number: 6 (lower is better)
Translates to: STDGSGPASRLG*QCACSWQRRGS
Trigger: AGAGCCCCGACGCTGCCAACTGCATGCGCATTGGCATCCCAGCCGAGAGGCTGGGCCGCTACCATCAGTGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS GCA 72 bp GTCACCACGCCCAGCAGGCAGACGACGTTGGGGTGTTaGAGCCGTGCTCGCAGCATAGCCTCATGCCGGAAC +
Preference number: 6 (lower is better)
Translates to: VTTPSRQTTLGC*SRARSIASCRN
Trigger: GTTCCGGCATGAGGCTATGCTGCGAGCACGGCTGCAACACCCCAACGTCGTCTGCCTGCTGGGCGTGGTGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS GCA 72 bp ACCGTGCGGTCATCATCGGTGCTGCCCACGTCCGAGTaGGGCGAGCGCATGACCAGGAATTCGTGGAGGTCG +
Preference number: 6 (lower is better)
Translates to: TVRSSSVLPTSE*GERMTRNSWRS
Trigger: CGACCTCCACGAATTCCTGGTCATGCGCTCGCCGCACTCGGACGTGGGCAGCACCGATGATGACCGCACGGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS CCA 72 bp GGCTGGGCGAGGCCATCAGCTGTCGCCGCTGCGGTGTaGACGCAGATGCCTTCTGCTTATTCCGGCACATGC +
Preference number: 6 (lower is better)
Translates to: GWARPSAVAAAV*TQMPSAYSGTC
Trigger: GCATGTGCCGGAATAAGCAGAAGGCATCTGCGTCCACACCGCAGCGGCGACAGCTGATGGCCTCGCCCAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS CCA 72 bp GGGCCCCACGTAGCGGGCGTTGCTCACATTGCTCACTaGGCTGGTGCTCAGGGAGCTGGTCTGCGTGGTGTT +
Preference number: 6 (lower is better)
Translates to: GPHVAGVAHIAH*AGAQGAGLRGV
Trigger: AACACCACGCAGACCAGCTCCCTGAGCACCAGCCCAGTGAGCAATGTGAGCAACGCCCGCTACGTGGGGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375708.4
ENST00000550066.5
CDS CCA 72 bp GGGCCATCTGCATTGGGATCTGCACCGGGTAGAAGTTaGGCAGGTAGGCCCCATAGGCCGGCACCGGCTGGT +
Preference number: 6 (lower is better)
Translates to: GPSALGSAPGRS*AGRPHRPAPAG
Trigger: ACCAGCCGGTGCCGGCCTATGGGGCCTACCTGCCCAACTTCTACCCGGTGCAGATCCCAATGCAGATGGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375708.4
ENST00000550066.5
CDS CCA 72 bp CGAACCCCGGGCCCTGGTGCCACTCAAGCTTCCAGCTaGACTTGGGCCTCGTCCACCTGCAGAGTGTCACAG +
Preference number: 6 (lower is better)
Translates to: RTPGPGATQASS*TWASSTCRVSQ
Trigger: CTGTGACACTCTGCAGGTGGACGAGGCCCAAGTCCAGCTGGAAGCTTGAGTGGCACCAGGGCCCGGGGTTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375708.4
ENST00000550066.5
CDS TCA 72 bp GGGGTGCTGCAGGGCCCACGGCTGGCACTGGTGGCCTaGCTTGGTGGTGCTTGCCGTTCCTCTGTAATCCAT +
Preference number: 6 (lower is better)
Translates to: GVLQGPRLALVA*LGGACRSSVIH
Trigger: ATGGATTACAGAGGAACGGCAAGCACCACCAAGTCAGGCCACCAGTGCCAGCCGTGGGCCCTGCAGCACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS GCA 72 bp ACCCAGGCGGGACAGTCATCGGGGCAAGGCAGCACCTaGCGGTTCCGGATCATCTCCACCACATCCTGGTTG +
Preference number: 6 (lower is better)
Translates to: TQAGQSSGQGST*RFRIISTTSWL
Trigger: CAACCAGGATGTGGTGGAGATGATCCGGAACCGGCAGGTGCTGCCTTGCCCCGATGACTGTCCCGCCTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS CCA 72 bp GCTGCAGGGCCCACGGCTGGCACTGGTGGCCTGACTTaGTGGTGCTTGCCGTTCCTCTGTAATCCATGCCTG +
Preference number: 6 (lower is better)
Translates to: AAGPTAGTGGLT*WCLPFLCNPCL
Trigger: CAGGCATGGATTACAGAGGAACGGCAAGCACCACCAAGTCAGGCCACCAGTGCCAGCCGTGGGCCCTGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS CAA 72 bp TGGTCCTTGGTCACCACGCCCAGCAGGCAGACGACGTaGGGGTGTTGCAGCCGTGCTCGCAGCATAGCCTCA +
Preference number: 6 (lower is better)
Translates to: WSLVTTPSRQTT*GCCSRARSIAS
Trigger: TGAGGCTATGCTGCGAGCACGGCTGCAACACCCCAACGTCGTCTGCCTGCTGGGCGTGGTGACCAAGGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS GCA 72 bp ATGTCTTGGCTGGGCGAGGCCATCAGCTGTCGCCGCTaGGGTGTGGACGCAGATGCCTTCTGCTTATTCCGG +
Preference number: 6 (lower is better)
Translates to: MSWLGEAISCRR*GVDADAFCLFR
Trigger: CCGGAATAAGCAGAAGGCATCTGCGTCCACACCGCAGCGGCGACAGCTGATGGCCTCGCCCAGCCAAGACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS CCA 72 bp GTCCGGGAGCGCGCGTCGCACAGAGGAAACACGAAGTaGCAGAAGGATGGGATGGCGAACTGTGAGCACTGG +
Preference number: 6 (lower is better)
Translates to: VRERASHRGNTK*QKDGMANCEHW
Trigger: CCAGTGCTCACAGTTCGCCATCCCATCCTTCTGCCACTTCGTGTTTCCTCTGTGCGACGCGCGCTCCCGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS CCA 72 bp GTTATAGCACTGATGGTAGCGGCCCAGCCTCTCGGCTaGGATGCCAATGCGCATGCAGTTGGCAGCGTCGGG +
Preference number: 6 (lower is better)
Translates to: VIALMVAAQPLG*DANAHAVGSVG
Trigger: CCCGACGCTGCCAACTGCATGCGCATTGGCATCCCAGCCGAGAGGCTGGGCCGCTACCATCAGTGCTATAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS CCA 72 bp TCTGGGCCCAGGGTCTGTCATGCGGTTGAAGTCACATaGCAGTGCAGGCTGGGGTCCCGTGGCATAACGCGA +
Preference number: 6 (lower is better)
Translates to: SGPRVCHAVEVT*QCRLGSRGITR
Trigger: TCGCGTTATGCCACGGGACCCCAGCCTGCACTGCCATGTGACTTCAACCGCATGACAGACCCTGGGCCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS CCA 72 bp ACCCCTTTCTACGATGCGTCCGCTCCTCCTTCTCCCTaGCGCTTCGCAAACGGGTCCACTTCGAGGACCTCG +
Preference number: 6 (lower is better)
Translates to: TPFYDASAPPSP*RFANGSTSRTS
Trigger: CGAGGTCCTCGAAGTGGACCCGTTTGCGAAGCGCCAGGGAGAAGGAGGAGCGGACGCATCGTAGAAAGGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375708.4
CDS CCA 72 bp CATCTGAGGAGGCACCTGCTGCGGGGCCATCTGCATTaGGATCTGCACCGGGTAGAAGTTGGGCAGGTAGGC +
Preference number: 6 (lower is better)
Translates to: HLRRHLLRGHLH*DLHRVEVGQVG
Trigger: GCCTACCTGCCCAACTTCTACCCGGTGCAGATCCCAATGCAGATGGCCCCGCAGCAGGTGCCTCCTCAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375708.4
ENST00000550066.5
CDS CAA 72 bp CCATCTGAGGAGGCACCTGCTGCGGGGCCATCTGCATaGGGATCTGCACCGGGTAGAAGTTGGGCAGGTAGG +
Preference number: 6 (lower is better)
Translates to: PSEEAPAAGPSA*GSAPGRSWAGR
Trigger: CCTACCTGCCCAACTTCTACCCGGTGCAGATCCCAATGCAGATGGCCCCGCAGCAGGTGCCTCCTCAGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375708.4
ENST00000550066.5
CDS CAA 72 bp TCTCTGGCTCCCAGAGCAGATGCACAAAGGCAAGGCTaGCTAGGACCCCTGCGGTCGAGGGCCTTGGGTTGC +
Preference number: 6 (lower is better)
Translates to: SLAPRADAQRQG*LGPLRSRALGC
Trigger: GCAACCCAAGGCCCTCGACCGCAGGGGTCCTAGCAAGCCTTGCCTTTGTGCATCTGCTCTGGGAGCCAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550066.5
CDS GCA 72 bp CCCAGGGTCTGTCATGCGGTTGAAGTCACATGGCAGTaGAGGCTGGGGTCCCGTGGCATAACGCGAAAGTCG +
Preference number: 6 (lower is better)
Translates to: PRVCHAVEVTWQ*RLGSRGITRKS
Trigger: CGACTTTCGCGTTATGCCACGGGACCCCAGCCTGCACTGCCATGTGACTTCAACCGCATGACAGACCCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS CAA 90 bp GAGTTTGGCCTGTTTGTGCTGGTTAATGAGGGGCATTTCCATGTCTaGGCTGGGCGAGGCCATCAGCTGTCGCCGCTGCGGTGTGGACGC +
Preference number: 6 (lower is better)
Translates to: EFGLFVLVNEGHFHV*AGRGHQLSPLRCGR
Trigger: GCGTCCACACCGCAGCGGCGACAGCTGATGGCCTCGCCCAGCCAAGACATGGAAATGCCCCTCATTAACCAGCACAAACAGGCCAAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS CAA 90 bp AGGCTGGGGTCCCGTGGCATAACGCGAAAGTCGGTGGCTTCATCCTaGAAGTCAGCGAGACCACGAACCCACCGGCAGGAACCAACTCCA +
Preference number: 6 (lower is better)
Translates to: RLGSRGITRKSVASS*KSARPRTHRQEPTP
Trigger: TGGAGTTGGTTCCTGCCGGTGGGTTCGTGGTCTCGCTGACTTCAAGGATGAAGCCACCGACTTTCGCGTTATGCCACGGGACCCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS GCA 72 bp ACTCAAGCTTCCAGCTGGACTTGGGCCTCGTCCACCTaGAGAGTGTCACAGTCCCCCAGCAGCTCAGTCTCT +
Preference number: 6 (lower is better)
Translates to: TQASSWTWASST*RVSQSPSSSVS
Trigger: AGAGACTGAGCTGCTGGGGGACTGTGACACTCTGCAGGTGGACGAGGCCCAAGTCCAGCTGGAAGCTTGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375708.4
ENST00000550066.5
CDS CAA 72 bp AGCCACCGCACGTTAGGGGGTGGGTTTCCTGCCACCTaGCAGTGCAGAATTGCCGTCTGGCCTTGGACAATG +
Preference number: 6 (lower is better)
Translates to: SHRTLGGGFPAT*QCRIAVWPWTM
Trigger: CATTGTCCAAGGCCAGACGGCAATTCTGCACTGCAAGGTGGCAGGAAACCCACCCCCTAACGTGCGGTGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000495386.5
ENST00000546883.1
ENST00000548585.2
ENST00000550066.5
CDS CAA 72 bp CTGTTTGTGCTGGTTAATGAGGGGCATTTCCATGTCTaGGCTGGGCGAGGCCATCAGCTGTCGCCGCTGCGG +
Preference number: 6 (lower is better)
Translates to: LFVLVNEGHFHV*AGRGHQLSPLR
Trigger: CCGCAGCGGCGACAGCTGATGGCCTCGCCCAGCCAAGACATGGAAATGCCCCTCATTAACCAGCACAAACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS CAA 90 bp CTTTCAACTTCTCTGGCTCCCAGAGCAGATGCACAAAGGCAAGGCTaGCTAGGACCCCTGCGGTCGAGGGCCTTGGGTTGCTACTCCAGG +
Preference number: 6 (lower is better)
Translates to: LSTSLAPRADAQRQG*LGPLRSRALGCYSR
Trigger: CCTGGAGTAGCAACCCAAGGCCCTCGACCGCAGGGGTCCTAGCAAGCCTTGCCTTTGTGCATCTGCTCTGGGAGCCAGAGAAGTTGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550066.5
CDS TCA 72 bp CCAGGAATTCGTGGAGGTCGCCGTGCGAACAGTAGCTaGAGATCATGCTCAGGGGCTGGTCCTTGGTCACCA +
Preference number: 6 (lower is better)
Translates to: PGIRGGRRANSS*RSCSGAGPWSP
Trigger: TGGTGACCAAGGACCAGCCCCTGAGCATGATCTTCAGCTACTGTTCGCACGGCGACCTCCACGAATTCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS GCA 72 bp GGCCATCAGCTGTCGCCGCTGCGGTGTGGACGCAGATaGCTTCTGCTTATTCCGGCACATGCAAACCAAGAA +
Preference number: 6 (lower is better)
Translates to: GHQLSPLRCGRR*LLLIPAHANQE
Trigger: TTCTTGGTTTGCATGTGCCGGAATAAGCAGAAGGCATCTGCGTCCACACCGCAGCGGCGACAGCTGATGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS CCA 72 bp GGAATGCAGGTGTCGTTCTTCAGGTGGCAGAAGTGTTaGGTCAACTGTCCTGTGTGGCTCCTTGGGCCGGCT +
Preference number: 6 (lower is better)
Translates to: GMQVSFFRWQKC*VNCPVWLLGPA
Trigger: AGCCGGCCCAAGGAGCCACACAGGACAGTTGACCCAACACTTCTGCCACCTGAAGAACGACACCTGCATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493846.1
ENST00000495386.5
ENST00000546883.1
CDS CAA 72 bp AGGAATGCAGGTGTCGTTCTTCAGGTGGCAGAAGTGTaGGGTCAACTGTCCTGTGTGGCTCCTTGGGCCGGC +
Preference number: 6 (lower is better)
Translates to: RNAGVVLQVAEV*GQLSCVAPWAG
Trigger: GCCGGCCCAAGGAGCCACACAGGACAGTTGACCCAACACTTCTGCCACCTGAAGAACGACACCTGCATTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000493846.1
ENST00000495386.5
ENST00000546883.1
CDS TCA 72 bp AAACACGAAGTGGCAGAAGGATGGGATGGCGAACTGTaGGCACTGGTCCGACAGGTGCGTAGACGTGCCGAT +
Preference number: 6 (lower is better)
Translates to: KHEVAEGWDGEL*ALVRQVRRRAD
Trigger: ATCGGCACGTCTACGCACCTGTCGGACCAGTGCTCACAGTTCGCCATCCCATCCTTCTGCCACTTCGTGTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS TCA 72 bp CTTGGTGGTGCTTGCCGTTCCTCTGTAATCCATGCCTaGGCCGTTATAGCACTGATGGTAGCGGCCCAGCCT +
Preference number: 6 (lower is better)
Translates to: LGGACRSSVIHA*AVIALMVAAQP
Trigger: AGGCTGGGCCGCTACCATCAGTGCTATAACGGCTCAGGCATGGATTACAGAGGAACGGCAAGCACCACCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS GCA 72 bp CGCACGTTAGGGGGTGGGTTTCCTGCCACCTTGCAGTaGAGAATTGCCGTCTGGCCTTGGACAATGGTGATA +
Preference number: 6 (lower is better)
Translates to: RTLGGGFPATLQ*RIAVWPWTMVI
Trigger: TATCACCATTGTCCAAGGCCAGACGGCAATTCTGCACTGCAAGGTGGCAGGAAACCCACCCCCTAACGTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000495386.5
ENST00000546883.1
ENST00000548585.2
ENST00000550066.5
CDS CCA 72 bp ACCAACTCCAGACACATTATGCCACAACAAAGCGTTTaGCGTCTCCGTCATCCAGCACTGCCTCCCGCTGCC +
Preference number: 6 (lower is better)
Translates to: TNSRHIMPQQSV*RLRHPALPPAA
Trigger: GGCAGCGGGAGGCAGTGCTGGATGACGGAGACGCCAAACGCTTTGTTGTGGCATAATGTGTCTGGAGTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS CCA 72 bp TTCAGGTGGCAGAAGTGTTGGGTCAACTGTCCTGTGTaGCTCCTGAAGTCCGGGACACTGAGAGCAGAAGCG +
Preference number: 6 (lower is better)
Translates to: FRWQKCWVNCPV*LLKSGTLRAEA
Trigger: CGCTTCTGCTCTCAGTGTCCCGGACTTCAGGAGCCACACAGGACAGTTGACCCAACACTTCTGCCACCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476440.1
CDS CCA 72 bp GGAATGCAGGTGTCGTTCTTCAGGTGGCAGAAGTGTTaGGTCAACTGTCCTGTGTGGCTCCTGAAGTCCGGG +
Preference number: 6 (lower is better)
Translates to: GMQVSFFRWQKC*VNCPVWLLKSG
Trigger: CCCGGACTTCAGGAGCCACACAGGACAGTTGACCCAACACTTCTGCCACCTGAAGAACGACACCTGCATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476440.1
CDS CAA 90 bp CAGAGATGGAGGAATGCAGGTGTCGTTCTTCAGGTGGCAGAAGTGTaGGGTCAACTGTCCTGTGTGGCTCCTGAAGTCCGGGACACTGAG +
Preference number: 6 (lower is better)
Translates to: QRWRNAGVVLQVAEV*GQLSCVAPEVRDTE
Trigger: CTCAGTGTCCCGGACTTCAGGAGCCACACAGGACAGTTGACCCAACACTTCTGCCACCTGAAGAACGACACCTGCATTCCTCCATCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476440.1
CDS GCA 72 bp CTGACTTGGTGGTGCTTGCCGTTCCTCTGTAATCCATaGCTGAGCCGTTATAGCACTGATGGTAGCGGCCCA +
Preference number: 6 (lower is better)
Translates to: LTWWCLPFLCNP*LSRYSTDGSGP
Trigger: TGGGCCGCTACCATCAGTGCTATAACGGCTCAGGCATGGATTACAGAGGAACGGCAAGCACCACCAAGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS GCA 72 bp GGTACGTCACACAGTTCCATGCGTACGTTTTTATTCTaGGTAAAGCACCAGGGGCCCTCCATCTGGCCTCCG +
Preference number: 6 (lower is better)
Translates to: GTSHSSMRTFLF*VKHQGPSIWPP
Trigger: CGGAGGCCAGATGGAGGGCCCCTGGTGCTTTACGCAGAATAAAAACGTACGCATGGAACTGTGTGACGTACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS GCA 72 bp AGCTGTCGCCGCTGCGGTGTGGACGCAGATGCCTTCTaGTTATTCCGGCACATGCAAACCAAGAAGAAAAGG +
Preference number: 6 (lower is better)
Translates to: SCRRCGVDADAF*LFRHMQTKKKR
Trigger: CCTTTTCTTCTTGGTTTGCATGTGCCGGAATAAGCAGAAGGCATCTGCGTCCACACCGCAGCGGCGACAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS CAA 72 bp AACCAACTCCAGACACATTATGCCACAACAAAGCGTTaGGCGTCTCCGTCATCCAGCACTGCCTCCCGCTGC +
Preference number: 6 (lower is better)
Translates to: NQLQTHYATTKR*ASPSSSTASRC
Trigger: GCAGCGGGAGGCAGTGCTGGATGACGGAGACGCCAAACGCTTTGTTGTGGCATAATGTGTCTGGAGTTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375715.5
CDS CAA 72 bp AGGAATGCAGGTGTCGTTCTTCAGGTGGCAGAAGTGTaGGGTCAACTGTCCTGTGTGGCTCCTGAAGTCCGG +
Preference number: 6 (lower is better)
Translates to: RNAGVVLQVAEV*GQLSCVAPEVR
Trigger: CCGGACTTCAGGAGCCACACAGGACAGTTGACCCAACACTTCTGCCACCTGAAGAACGACACCTGCATTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476440.1
CDS TCA 72 bp AGTGTCTGTCGTGTCCAGGTCCTGGATTCGCAGTCGTaGACCATATTCTGTCTTCCGGATGATGATCCGCCG +
Preference number: 6 (lower is better)
Translates to: SVCRVQVLDSQS*TIFCLPDDDPP
Trigger: CGGCGGATCATCATCCGGAAGACAGAATATGGTTCACGACTGCGAATCCAGGACCTGGACACGACAGACACT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000495386.5
ENST00000550066.5
CDS GCA 72 bp AGACCCAGAAGGGACTCCCCTGACAGTCAGACTGCCTaGCGTGTCTTTTATCCAGGACTGTCGGGAAATACA +
Preference number: 6 (lower is better)
Translates to: RPRRDSPDSQTA*RVFYPGLSGNT
Trigger: TGTATTTCCCGACAGTCCTGGATAAAAGACACGGCAGGCAGTCTGACTGTCAGGGGAGTCCCTTCTGGGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550066.5
CDS CAA 90 bp TCATTCTTTAGCCACCGCACGTTAGGGGGTGGGTTTCCTGCCACCTaGCAGTGCAGAATTGCCGTCTGGCCTTGGACAATGGTGATATTG +
Preference number: 6 (lower is better)
Translates to: SFFSHRTLGGGFPAT*QCRIAVWPWTMVIL
Trigger: CAATATCACCATTGTCCAAGGCCAGACGGCAATTCTGCACTGCAAGGTGGCAGGAAACCCACCCCCTAACGTGCGGTGGCTAAAGAATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000495386.5
ENST00000546883.1
ENST00000548585.2
ENST00000550066.5
CDS GCA 72 bp AGGGGGTGGGTTTCCTGCCACCTTGCAGTGCAGAATTaGCGTCTGGCCTTGGACAATGGTGATATTGTTTAC +
Preference number: 6 (lower is better)
Translates to: RGWVSCHLAVQN*RLALDNGDIVY
Trigger: GTAAACAATATCACCATTGTCCAAGGCCAGACGGCAATTCTGCACTGCAAGGTGGCAGGAAACCCACCCCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000495386.5
ENST00000546883.1
ENST00000548585.2
ENST00000550066.5
CDS CCA 72 bp GGGTTTCCTGCCACCTTGCAGTGCAGAATTGCCGTCTaGCCTTGGACAATGGTGATATTGTTTACTGGCTCC +
Preference number: 6 (lower is better)
Translates to: GFPATLQCRIAV*PWTMVILFTGS
Trigger: GGAGCCAGTAAACAATATCACCATTGTCCAAGGCCAGACGGCAATTCTGCACTGCAAGGTGGCAGGAAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000495386.5
ENST00000546883.1
ENST00000548585.2
ENST00000550066.5
CDS CCA 72 bp CCCATCCTCGTGGTAATCATCCTGAAAGTTATGATTTaGGCTGTGCGTTGGACCCAGCCGCACAAACAGGAC +
Preference number: 6 (lower is better)
Translates to: PILVVIILKVMI*AVRWTQPHKQD
Trigger: GTCCTGTTTGTGCGGCTGGGTCCAACGCACAGCCCAAATCATAACTTTCAGGATGATTACCACGAGGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS TCA 72 bp ACTGTCGGGAAATACAACCTCTTCAAAAATCCCGAGTaGGGCCGCTTTCAACTTCTCTGGCTCCCAGAGCAG +
Preference number: 6 (lower is better)
Translates to: TVGKYNLFKNPE*GRFQLLWLPEQ
Trigger: CTGCTCTGGGAGCCAGAGAAGTTGAAAGCGGCCTCACTCGGGATTTTTGAAGAGGTTGTATTTCCCGACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550066.5
CDS CCA 72 bp AAAGGGTCGTTCGGATCCAGAACCTCCACTTCACCTTaGAAGACGAGATCCAGAAAGCTTCACAGGAACTGG +
Preference number: 6 (lower is better)
Translates to: KGSFGSRTSTSP*KTRSRKLHRNW
Trigger: CCAGTTCCTGTGAAGCTTTCTGGATCTCGTCTTCCAAGGTGAAGTGGAGGTTCTGGATCCGAACGACCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495386.5
ENST00000550066.5
CDS CAA 72 bp ACCCATCCTCGTGGTAATCATCCTGAAAGTTATGATTaGGGCTGTGCGTTGGACCCAGCCGCACAAACAGGA +
Preference number: 6 (lower is better)
Translates to: THPRGNHPESYD*GCALDPAAQTG
Trigger: TCCTGTTTGTGCGGCTGGGTCCAACGCACAGCCCAAATCATAACTTTCAGGATGATTACCACGAGGATGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000550066.5
CDS CCA 72 bp CCTGCCACCTTGCAGTGCAGAATTGCCGTCTGGCCTTaGACAATGGTGATATTGTTTACTGGCTCCAGAAAA +
Preference number: 6 (lower is better)
Translates to: PATLQCRIAVWP*TMVILFTGSRK
Trigger: TTTTCTGGAGCCAGTAAACAATATCACCATTGTCCAAGGCCAGACGGCAATTCTGCACTGCAAGGTGGCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000495386.5
ENST00000546883.1
ENST00000548585.2
ENST00000550066.5
CDS TCA 72 bp TGCAGTGCAGAATTGCCGTCTGGCCTTGGACAATGGTaGTATTGTTTACTGGCTCCAGAAAATTCAGAAAGT +
Preference number: 6 (lower is better)
Translates to: CSAELPSGLGQW*YCLLAPENSES
Trigger: ACTTTCTGAATTTTCTGGAGCCAGTAAACAATATCACCATTGTCCAAGGCCAGACGGCAATTCTGCACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000375708.4
ENST00000375715.5
ENST00000495386.5
ENST00000546883.1
ENST00000548585.2
ENST00000550066.5
CDS CCA 72 bp CAGCCAACTTCTAGCAAATTCGGCAAAGACATGAGCTaGCAGGATTTAAACCCCGGATTCCTACATAACAAA +
Preference number: 6 (lower is better)
Translates to: QPTSSKFGKDMS*QDLNPGFLHNK
Trigger: TTTGTTATGTAGGAATCCGGGGTTTAAATCCTGCCAGCTCATGTCTTTGCCGAATTTGCTAGAAGTTGGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548585.2
CDS CAA 72 bp AGTTCAATCTCTTCAACAGGGTGGGAGTCACTCAACTaGTTCATTTCATCACTCTTCATGTTTCCCACTCAC +
Preference number: 6 (lower is better)
Translates to: SSISSTGWESLN*FISSLFMFPTH
Trigger: GTGAGTGGGAAACATGAAGAGTGATGAAATGAACAAGTTGAGTGACTCCCACCCTGTTGAAGAGATTGAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000495386.5
ENST00000550066.5
CDS CAA 90 bp TCCCATCCTAGGCAAAGGGTACATTCGTGGGGAGGAGGAAATCTTTaGAGAGTTCCATTTCTAACATCCAATTATTTGAAAGTTGCCATC +
Preference number: 6 (lower is better)
Translates to: SHPRQRVHSWGGGNL*RVPFLTSNYLKVAI
Trigger: GATGGCAACTTTCAAATAATTGGATGTTAGAAATGGAACTCTCAAAAGATTTCCTCCTCCCCACGAATGTACCCTTTGCCTAGGATGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550066.5
CDS CAA 72 bp AGGCAAAGGGTACATTCGTGGGGAGGAGGAAATCTTTaGAGAGTTCCATTTCTAACATCCAATTATTTGAAA +
Preference number: 6 (lower is better)
Translates to: RQRVHSWGGGNL*RVPFLTSNYLK
Trigger: TTTCAAATAATTGGATGTTAGAAATGGAACTCTCAAAAGATTTCCTCCTCCCCACGAATGTACCCTTTGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550066.5
CDS CAA 72 bp CTCACATGCAATTTTACCAAAGTGCTTATAAACTTGTaGCTTGTTGCAAATAATGTACACACAAGGAAGGCC +
Preference number: 6 (lower is better)
Translates to: LTCNFTKVLINL*LVANNVHTRKA
Trigger: GGCCTTCCTTGTGTGTACATTATTTGCAACAAGCAACAAGTTTATAAGCACTTTGGTAAAATTGCATGTGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476440.1
ENST00000493846.1