Pregenerated sensors for ROPN1L (Homo sapiens)
Ensembl gene IDs: ENSG00000145491Ensembl transcript IDs: ENST00000274134.5, ENST00000503804.5, ENST00000510520.5, ENST00000512022.1, ENST00000515762.5
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CGCGGGGCTTGCGGCCAGGGCCGCCTCCCATCCCGTTCCCGAGGTTaGGGCCGGATTCGCGGGGCTCTTACCCGCTCCTCCGCGGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: RGACGQGRLPSRSRG*GRIRGALTRSSAGF Trigger: GAAGCCCGCGGAGGAGCGGGTAAGAGCCCCGCGAATCCGGCCCCAACCTCGGGAACGGGATGGGAGGCGGCCCTGGCCGCAAGCCCCGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000274134.5 ENST00000510520.5 |
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| CDS CCA 90 bp | GCGCACGCGCACGCGGCCCTGAGCGAGGCGGGGCTGCTCCCGGGCTaGACAAGGAGGTGCTGGCGTAGTCCGACTAGCAGCAGCCGCTGC | + |
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Preference number: 5 (lower is better) Translates to: AHAHAALSEAGLLPG*TRRCWRSPTSSSRC Trigger: GCAGCGGCTGCTGCTAGTCGGACTACGCCAGCACCTCCTTGTCCAGCCCGGGAGCAGCCCCGCCTCGCTCAGGGCCGCGTGCGCGTGCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503804.5 |
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| CDS GCA 90 bp | GCGGCCCTGAGCGAGGCGGGGCTGCTCCCGGGCTGGACAAGGAGGTaGTGGCGTAGTCCGACTAGCAGCAGCCGCTGCTCCCCGGTGGTT | + |
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Preference number: 5 (lower is better) Translates to: AALSEAGLLPGWTRR*WRSPTSSSRCSPVV Trigger: AACCACCGGGGAGCAGCGGCTGCTGCTAGTCGGACTACGCCAGCACCTCCTTGTCCAGCCCGGGAGCAGCCCCGCCTCGCTCAGGGCCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503804.5 |
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| CDS CCA 90 bp | GCCCTGAGCGAGGCGGGGCTGCTCCCGGGCTGGACAAGGAGGTGCTaGCGTAGTCCGACTAGCAGCAGCCGCTGCTCCCCGGTGGTTCAG | + |
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Preference number: 5 (lower is better) Translates to: ALSEAGLLPGWTRRC*RSPTSSSRCSPVVQ Trigger: CTGAACCACCGGGGAGCAGCGGCTGCTGCTAGTCGGACTACGCCAGCACCTCCTTGTCCAGCCCGGGAGCAGCCCCGCCTCGCTCAGGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503804.5 |
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| CDS TCA 90 bp | GGTGTCGGGAAGCGGCATCGCTCTCCGCAGAAGGGACCAGGCTGGTaGATCGCGGCGCGCTGCGAGGAAGAAGGGCGGCTGTCGGCTACG | + |
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Preference number: 5 (lower is better) Translates to: GVGKRHRSPQKGPGW*IAARCEEEGRLSAT Trigger: CGTAGCCGACAGCCGCCCTTCTTCCTCGCAGCGCGCCGCGATTCACCAGCCTGGTCCCTTCTGCGGAGAGCGATGCCGCTTCCCGACACC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000274134.5 ENST00000510520.5 ENST00000512022.1 |
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| CDS GCA 90 bp | CGAGCGGGCCCGCCCTCCGGATCGTCCGTGAGGATCTCGCACAGGTaGTTCAGCGCAGTGTTCAAGGACCCACCAAGCATGCTGCATCCA | + |
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Preference number: 5 (lower is better) Translates to: RAGPPSGSSVRISHR*FSAVFKDPPSMLHP Trigger: TGGATGCAGCATGCTTGGTGGGTCCTTGAACACTGCGCTGAAGCACCTGTGCGAGATCCTCACGGACGATCCGGAGGGCGGGCCCGCTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000274134.5 ENST00000503804.5 ENST00000510520.5 ENST00000512022.1 ENST00000515762.5 |
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| CDS CCA 90 bp | TGTCCGGCAGCTCCGGGGGAATGTGGATCTGCTGAGCGCAGAACATaGTGTCGGGAAGCGGCATCGCTCTCCGCAGAAGGGACCAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: CPAAPGECGSAERRT*CREAASLSAEGTRL Trigger: CAGCCTGGTCCCTTCTGCGGAGAGCGATGCCGCTTCCCGACACCATGTTCTGCGCTCAGCAGATCCACATTCCCCCGGAGCTGCCGGACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000274134.5 ENST00000503804.5 ENST00000510520.5 ENST00000512022.1 ENST00000515762.5 |
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| CDS CCA 90 bp | GGAGGTGCTGGCGTAGTCCGACTAGCAGCAGCCGCTGCTCCCCGGTaGTTCAGAGCCGCGCGAGCTGAGCGTTTCGCCTACAAAAGCATC | + |
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Preference number: 5 (lower is better) Translates to: GGAGVVRLAAAAAPR*FRAARAERFAYKSI Trigger: GATGCTTTTGTAGGCGAAACGCTCAGCTCGCGCGGCTCTGAACCACCGGGGAGCAGCGGCTGCTGCTAGTCGGACTACGCCAGCACCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503804.5 |
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| CDS TCA 90 bp | ACTAGCAGCAGCCGCTGCTCCCCGGTGGTTCAGAGCCGCGCGAGCTaGGCGTTTCGCCTACAAAAGCATCTTCGGATCGGTTTCCCACCG | + |
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Preference number: 5 (lower is better) Translates to: TSSSRCSPVVQSRAS*AFRLQKHLRIGFPP Trigger: CGGTGGGAAACCGATCCGAAGATGCTTTTGTAGGCGAAACGCTCAGCTCGCGCGGCTCTGAACCACCGGGGAGCAGCGGCTGCTGCTAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503804.5 |
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| CDS GCA 90 bp | GGGAGAAATTCGGACCAACTGCCACTCCGACAACACCCTAGACCCTaGAGTTCCCTAGCGCCAGCCGCCACTACGGACGCGCTCGGTATC | + |
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Preference number: 5 (lower is better) Translates to: GRNSDQLPLRQHPRP*SSLAPAATTDALGI Trigger: GATACCGAGCGCGTCCGTAGTGGCGGCTGGCGCTAGGGAACTGCAGGGTCTAGGGTGTTGTCGGAGTGGCAGTTGGTCCGAATTTCTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000274134.5 ENST00000503804.5 ENST00000510520.5 |
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| CDS TCA 90 bp | AATTGCTTCAGGATGTCCGGCAGCTCCGGGGGAATGTGGATCTGCTaGGCGCAGAACATGGTGTCGGGAAGCGGCATCGCTCTCCGCAGA | + |
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Preference number: 5 (lower is better) Translates to: NCFRMSGSSGGMWIC*AQNMVSGSGIALRR Trigger: TCTGCGGAGAGCGATGCCGCTTCCCGACACCATGTTCTGCGCTCAGCAGATCCACATTCCCCCGGAGCTGCCGGACATCCTGAAGCAATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000274134.5 ENST00000503804.5 ENST00000510520.5 ENST00000512022.1 ENST00000515762.5 |
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| CDS GCA 90 bp | AACTTTCAGGAGTCCTTGAGTCAGGCCTGTGTCTGTTTTCTGGGTTaGCGTGGGCATTTCCATTCTGTCCTTTACAGGAAGTGGATCTCC | + |
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Preference number: 5 (lower is better) Translates to: NFQESLSQACVCFLG*RGHFHSVLYRKWIS Trigger: GGAGATCCACTTCCTGTAAAGGACAGAATGGAAATGCCCACGGCAACCCAGAAAACAGACACAGGCCTGACTCAAGGACTCCTGAAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000274134.5 ENST00000503804.5 ENST00000510520.5 ENST00000512022.1 ENST00000515762.5 |
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| CDS CCA 90 bp | ATGGTCGAATGGCCGTGTGCTGGACCCCACCATGTCTTCATCGAATaGCCGTGTGCTGGATATTTCAAACTTCTTTGTCTAGCACATTCC | + |
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Preference number: 5 (lower is better) Translates to: MVEWPCAGPHHVFIE*PCAGYFKLLCLAHS Trigger: GGAATGTGCTAGACAAAGAAGTTTGAAATATCCAGCACACGGCCATTCGATGAAGACATGGTGGGGTCCAGCACACGGCCATTCGACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510520.5 |
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| CDS CAA 90 bp | GCGGCTGTCGGCTACGACGCGGTGGACCCGCTAGCAGCGCGGGGCTaGCGGCCAGGGCCGCCTCCCATCCCGTTCCCGAGGTTGGGGCCG | + |
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Preference number: 6 (lower is better) Translates to: AAVGYDAVDPLAARG*RPGPPPIPFPRLGP Trigger: CGGCCCCAACCTCGGGAACGGGATGGGAGGCGGCCCTGGCCGCAAGCCCCGCGCTGCTAGCGGGTCCACCGCGTCGTAGCCGACAGCCGC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000274134.5 ENST00000510520.5 |
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| CDS CAA 72 bp | GGCTACGACGCGGTGGACCCGCTAGCAGCGCGGGGCTaGCGGCCAGGGCCGCCTCCCATCCCGTTCCCGAGG | + |
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Preference number: 6 (lower is better) Translates to: GYDAVDPLAARG*RPGPPPIPFPR Trigger: CCTCGGGAACGGGATGGGAGGCGGCCCTGGCCGCAAGCCCCGCGCTGCTAGCGGGTCCACCGCGTCGTAGCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000274134.5 ENST00000510520.5 |
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| CDS CCA 72 bp | TGCGGCCAGGGCCGCCTCCCATCCCGTTCCCGAGGTTaGGGCCGGATTCGCGGGGCTCTTACCCGCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: CGQGRLPSRSRG*GRIRGALTRSS Trigger: GGAGGAGCGGGTAAGAGCCCCGCGAATCCGGCCCCAACCTCGGGAACGGGATGGGAGGCGGCCCTGGCCGCA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000274134.5 ENST00000510520.5 |
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| CDS CCA 72 bp | GAGGCGGGGCTGCTCCCGGGCTGGACAAGGAGGTGCTaGCGTAGTCCGACTAGCAGCAGCCGCTGCTCCCCG | + |
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Preference number: 6 (lower is better) Translates to: EAGLLPGWTRRC*RSPTSSSRCSP Trigger: CGGGGAGCAGCGGCTGCTGCTAGTCGGACTACGCCAGCACCTCCTTGTCCAGCCCGGGAGCAGCCCCGCCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503804.5 |
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| CDS CCA 72 bp | CACGCGGCCCTGAGCGAGGCGGGGCTGCTCCCGGGCTaGACAAGGAGGTGCTGGCGTAGTCCGACTAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: HAALSEAGLLPG*TRRCWRSPTSS Trigger: GCTGCTAGTCGGACTACGCCAGCACCTCCTTGTCCAGCCCGGGAGCAGCCCCGCCTCGCTCAGGGCCGCGTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503804.5 |
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| CDS GCA 72 bp | AGCGAGGCGGGGCTGCTCCCGGGCTGGACAAGGAGGTaGTGGCGTAGTCCGACTAGCAGCAGCCGCTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: SEAGLLPGWTRR*WRSPTSSSRCS Trigger: GGAGCAGCGGCTGCTGCTAGTCGGACTACGCCAGCACCTCCTTGTCCAGCCCGGGAGCAGCCCCGCCTCGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503804.5 |
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| CDS TCA 72 bp | AAGCGGCATCGCTCTCCGCAGAAGGGACCAGGCTGGTaGATCGCGGCGCGCTGCGAGGAAGAAGGGCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: KRHRSPQKGPGW*IAARCEEEGRL Trigger: CAGCCGCCCTTCTTCCTCGCAGCGCGCCGCGATTCACCAGCCTGGTCCCTTCTGCGGAGAGCGATGCCGCTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000274134.5 ENST00000510520.5 ENST00000512022.1 |
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| CDS CCA 72 bp | GGCGTAGTCCGACTAGCAGCAGCCGCTGCTCCCCGGTaGTTCAGAGCCGCGCGAGCTGAGCGTTTCGCCTAC | + |
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Preference number: 6 (lower is better) Translates to: GVVRLAAAAAPR*FRAARAERFAY Trigger: GTAGGCGAAACGCTCAGCTCGCGCGGCTCTGAACCACCGGGGAGCAGCGGCTGCTGCTAGTCGGACTACGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000503804.5 |
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| CDS TCA 72 bp | AGGGGATGCGAGCGGGCCCGCCCTCCGGATCGTCCGTaGGGATCTCGCACAGGTGCTTCAGCGCAGTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: RGCERARPPDRP*GSRTGASAQCS Trigger: TGAACACTGCGCTGAAGCACCTGTGCGAGATCCTCACGGACGATCCGGAGGGCGGGCCCGCTCGCATCCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000274134.5 ENST00000503804.5 ENST00000510520.5 ENST00000512022.1 ENST00000515762.5 |
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| CDS CAA 90 bp | CCGCCGAATGTGAGCGGCGAACTCACGAAGGACTCCCTCTTCCCCTaGCTCTGGCTGCGTGAGGCTGAGGCTAGGGGACTCGGGCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: PPNVSGELTKDSLFP*LWLREAEARGLGPA Trigger: AGCAGGCCCGAGTCCCCTAGCCTCAGCCTCACGCAGCCAGAGCAAGGGGAAGAGGGAGTCCTTCGTGAGTTCGCCGCTCACATTCGGCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503804.5 |
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| CDS GCA 72 bp | TCGGACCAACTGCCACTCCGACAACACCCTAGACCCTaGAGTTCCCTAGCGCCAGCCGCCACTACGGACGCG | + |
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Preference number: 6 (lower is better) Translates to: SDQLPLRQHPRP*SSLAPAATTDA Trigger: CGCGTCCGTAGTGGCGGCTGGCGCTAGGGAACTGCAGGGTCTAGGGTGTTGTCGGAGTGGCAGTTGGTCCGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000274134.5 ENST00000503804.5 ENST00000510520.5 |
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| CDS CCA 72 bp | GCTCCGGGGGAATGTGGATCTGCTGAGCGCAGAACATaGTGTCGGGAAGCGGCATCGCTCTCCGCAGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: APGECGSAERRT*CREAASLSAEG Trigger: CCCTTCTGCGGAGAGCGATGCCGCTTCCCGACACCATGTTCTGCGCTCAGCAGATCCACATTCCCCCGGAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000274134.5 ENST00000503804.5 ENST00000510520.5 ENST00000512022.1 ENST00000515762.5 |
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| CDS TCA 72 bp | AGGATGTCCGGCAGCTCCGGGGGAATGTGGATCTGCTaGGCGCAGAACATGGTGTCGGGAAGCGGCATCGCT | + |
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Preference number: 6 (lower is better) Translates to: RMSGSSGGMWIC*AQNMVSGSGIA Trigger: AGCGATGCCGCTTCCCGACACCATGTTCTGCGCTCAGCAGATCCACATTCCCCCGGAGCTGCCGGACATCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000274134.5 ENST00000503804.5 ENST00000510520.5 ENST00000512022.1 ENST00000515762.5 |
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| CDS TCA 72 bp | AGCCGCTGCTCCCCGGTGGTTCAGAGCCGCGCGAGCTaGGCGTTTCGCCTACAAAAGCATCTTCGGATCGGT | + |
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Preference number: 6 (lower is better) Translates to: SRCSPVVQSRAS*AFRLQKHLRIG Trigger: ACCGATCCGAAGATGCTTTTGTAGGCGAAACGCTCAGCTCGCGCGGCTCTGAACCACCGGGGAGCAGCGGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503804.5 |
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| CDS GCA 72 bp | GCTCCTCCGCGGGCTTCGGGAGAAATTCGGACCAACTaGCACTCCGACAACACCCTAGACCCTGCAGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: APPRASGEIRTN*HSDNTLDPAVP Trigger: GGGAACTGCAGGGTCTAGGGTGTTGTCGGAGTGGCAGTTGGTCCGAATTTCTCCCGAAGCCCGCGGAGGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000274134.5 ENST00000503804.5 ENST00000510520.5 |
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| CDS GCA 72 bp | CCGCCCTCCGGATCGTCCGTGAGGATCTCGCACAGGTaGTTCAGCGCAGTGTTCAAGGACCCACCAAGCATG | + |
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Preference number: 6 (lower is better) Translates to: PPSGSSVRISHR*FSAVFKDPPSM Trigger: CATGCTTGGTGGGTCCTTGAACACTGCGCTGAAGCACCTGTGCGAGATCCTCACGGACGATCCGGAGGGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000274134.5 ENST00000503804.5 ENST00000510520.5 ENST00000512022.1 ENST00000515762.5 |
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| CDS TCA 72 bp | ATCTGGCCAAGTAGCGGTAAACGTAGGAAAACGTCTTaGAGGGGATGCGAGCGGGCCCGCCCTCCGGATCGT | + |
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Preference number: 6 (lower is better) Translates to: IWPSSGKRRKTS*RGCERARPPDR Trigger: ACGATCCGGAGGGCGGGCCCGCTCGCATCCCCTTCAAGACGTTTTCCTACGTTTACCGCTACTTGGCCAGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000274134.5 ENST00000503804.5 ENST00000510520.5 ENST00000512022.1 ENST00000515762.5 |
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| CDS GCA 72 bp | CCACCGCATCTTCACCCAAATGGTCGAATGGCCGTGTaGTGGACCCCACCATGTCTTCATCGAATGGCCGTG | + |
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Preference number: 6 (lower is better) Translates to: PPHLHPNGRMAV*WTPPCLHRMAV Trigger: CACGGCCATTCGATGAAGACATGGTGGGGTCCAGCACACGGCCATTCGACCATTTGGGTGAAGATGCGGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510520.5 |
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| CDS CCA 72 bp | CCGCATCTTCACCCAAATGGTCGAATGGCCGTGTGCTaGACCCCACCATGTCTTCATCGAATGGCCGTGTGC | + |
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Preference number: 6 (lower is better) Translates to: PHLHPNGRMAVC*TPPCLHRMAVC Trigger: GCACACGGCCATTCGATGAAGACATGGTGGGGTCCAGCACACGGCCATTCGACCATTTGGGTGAAGATGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510520.5 |
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| CDS TCA 72 bp | AAAAGCATCTTCGGATCGGTTTCCCACCGCCGAATGTaGGCGGCGAACTCACGAAGGACTCCCTCTTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: KSIFGSVSHRRM*AANSRRTPSSP Trigger: AGGGGAAGAGGGAGTCCTTCGTGAGTTCGCCGCTCACATTCGGCGGTGGGAAACCGATCCGAAGATGCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000503804.5 |
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| CDS CAA 90 bp | ATACCGCTTGTGGTGACACTGCTTGTGCAAAACTTTCAGGAGTCCTaGAGTCAGGCCTGTGTCTGTTTTCTGGGTTGCCGTGGGCATTTC | + |
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Preference number: 6 (lower is better) Translates to: IPLVVTLLVQNFQES*SQACVCFLGCRGHF Trigger: GAAATGCCCACGGCAACCCAGAAAACAGACACAGGCCTGACTCAAGGACTCCTGAAAGTTTTGCACAAGCAGTGTCACCACAAGCGGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000274134.5 ENST00000503804.5 ENST00000510520.5 ENST00000512022.1 ENST00000515762.5 |
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| CDS CAA 72 bp | GTGGTGACACTGCTTGTGCAAAACTTTCAGGAGTCCTaGAGTCAGGCCTGTGTCTGTTTTCTGGGTTGCCGT | + |
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Preference number: 6 (lower is better) Translates to: VVTLLVQNFQES*SQACVCFLGCR Trigger: ACGGCAACCCAGAAAACAGACACAGGCCTGACTCAAGGACTCCTGAAAGTTTTGCACAAGCAGTGTCACCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000274134.5 ENST00000503804.5 ENST00000510520.5 ENST00000512022.1 ENST00000515762.5 |
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| CDS CCA 72 bp | TGGCCGTGTGCTGGACCCCACCATGTCTTCATCGAATaGCCGTGTGCTGGATATTTCAAACTTCTTTGTCTA | + |
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Preference number: 6 (lower is better) Translates to: WPCAGPHHVFIE*PCAGYFKLLCL Trigger: TAGACAAAGAAGTTTGAAATATCCAGCACACGGCCATTCGATGAAGACATGGTGGGGTCCAGCACACGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510520.5 |
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| CDS CAA 90 bp | AAACTTTCAGGAGTCCTTGAGTCAGGCCTGTGTCTGTTTTCTGGGTaGCCGTGGGCATTTCCATTCTGTCCTTTACAGGAAGTGGATCTC | + |
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Preference number: 6 (lower is better) Translates to: KLSGVLESGLCLFSG*PWAFPFCPLQEVDL Trigger: GAGATCCACTTCCTGTAAAGGACAGAATGGAAATGCCCACGGCAACCCAGAAAACAGACACAGGCCTGACTCAAGGACTCCTGAAAGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000274134.5 ENST00000503804.5 ENST00000510520.5 ENST00000512022.1 ENST00000515762.5 |
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| CDS CCA 72 bp | CCCTACAAGGGGGAAGTGAAACAGGAAATTCTCCCATaGTCAACATACCTGAATCCTAGAGAGGGTGCATAC | + |
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Preference number: 6 (lower is better) Translates to: PYKGEVKQEILP*STYLNPREGAY Trigger: GTATGCACCCTCTCTAGGATTCAGGTATGTTGACCATGGGAGAATTTCCTGTTTCACTTCCCCCTTGTAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000512022.1 ENST00000515762.5 |
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| CDS CCA 72 bp | TGGACCCCACCATGTCTTCATCGAATGGCCGTGTGCTaGATATTTCAAACTTCTTTGTCTAGCACATTCCTT | + |
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Preference number: 6 (lower is better) Translates to: WTPPCLHRMAVC*IFQTSLSSTFL Trigger: AAGGAATGTGCTAGACAAAGAAGTTTGAAATATCCAGCACACGGCCATTCGATGAAGACATGGTGGGGTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510520.5 |
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| CDS GCA 72 bp | AATTTTTCCTTCGGCAGGCACAAGTTCTTCCACTTCTaGTCAAGATCTGTTAATTCCACATACCGCTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: NFSFGRHKFFHF*SRSVNSTYRLW Trigger: CCACAAGCGGTATGTGGAATTAACAGATCTTGAGCAGAAGTGGAAGAACTTGTGCCTGCCGAAGGAAAAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000274134.5 ENST00000503804.5 ENST00000510520.5 ENST00000512022.1 ENST00000515762.5 |
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| CDS GCA 72 bp | TCCTCTTTGGAAAGAAGAAATCTGAAAGACCTATCATaGCGTTCTTCCTGGCGTCTATATTTTCCTTTAGAG | + |
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Preference number: 6 (lower is better) Translates to: SSLERRNLKDLS*RSSWRLYFPLE Trigger: CTCTAAAGGAAAATATAGACGCCAGGAAGAACGGCATGATAGGTCTTTCAGATTTCTTCTTTCCAAAGAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000274134.5 ENST00000503804.5 |
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| CDS CAA 72 bp | CTGCATCCAAGCGCTAAAAAGTTTATCCACTTGATTTaGTTTTCACAAGGATCCAGTTGTAAGAGCGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: LHPSAKKFIHLI*FSQGSSCKSAL Trigger: CAAAGCGCTCTTACAACTGGATCCTTGTGAAAACAAAATCAAGTGGATAAACTTTTTAGCGCTTGGATGCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENST00000274134.5 ENST00000503804.5 ENST00000510520.5 ENST00000512022.1 ENST00000515762.5 |
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