RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ROGDI (Homo sapiens)

Ensembl gene IDs: ENSG00000067836

Ensembl transcript IDs: ENST00000322048.12, ENST00000585653.1, ENST00000585871.1, ENST00000586153.1, ENST00000586336.5, ENST00000586504.5, ENST00000587377.5, ENST00000587711.5, ENST00000587843.5, ENST00000588201.5, ENST00000589543.5, ENST00000590198.1, ENST00000591292.5, ENST00000591392.5, ENST00000592019.1, ENST00000592112.1

Found 466 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGAGGGTGGCGGGGGTGGTGAGCCGGTTTCGGGCTCTGGTCAGCTaGAGCATCACTGCGTCCATCAGCTGCAGGGAGAGGCGGGGTTGG +
Preference number: 1 (lower is better)
Translates to: VRVAGVVSRFRALVS*SITASISCRERRGW
Trigger: CCAACCCCGCCTCTCCCTGCAGCTGATGGACGCAGTGATGCTGCAGCTGACCAGAGCCCGAAACCGGCTCACCACCCCCGCCACCCTCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588201.5
3UTR TCA 90 bp AATAGCAGCCTGGCGTTGGCACTGGCTGGTGCTCTGTGGTGGGTATaGGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTG +
Preference number: 1 (lower is better)
Translates to: NSSLALALAGALWWV*VGDGAAFLETSSWV
Trigger: CACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCACAGAGCACCAGCCAGTGCCAACGCCAGGCTGCTATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
3UTR TCA 90 bp GTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTGCTGTaGTCAGAAGGGTCTGTAGCTCCAGTAGCTGGAGAACACGGAGAT +
Preference number: 1 (lower is better)
Translates to: VGDGAAFLETSSWVL*SEGSVAPVAGEHGD
Trigger: ATCTCCGTGTTCTCCAGCTACTGGAGCTACAGACCCTTCTGATCACAGCACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
3UTR CCA 90 bp AGCTGCAGCATCACTGCGTCCATCAGCTGCAGGGAGAGGCGGGGTTaGCTCTGCGTCCTCCCGTGTCCCCATGCATTAAGGAACAACAGA +
Preference number: 1 (lower is better)
Translates to: SCSITASISCRERRG*LCVLPCPHALRNNR
Trigger: TCTGTTGTTCCTTAATGCATGGGGACACGGGAGGACGCAGAGCCAACCCCGCCTCTCCCTGCAGCTGATGGACGCAGTGATGCTGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588201.5
3UTR GCA 90 bp AGCATCACTGCGTCCATCAGCTGCAGGGAGAGGCGGGGTTGGCTCTaGGTCCTCCCGTGTCCCCATGCATTAAGGAACAACAGACATGGT +
Preference number: 1 (lower is better)
Translates to: SITASISCRERRGWL*VLPCPHALRNNRHG
Trigger: ACCATGTCTGTTGTTCCTTAATGCATGGGGACACGGGAGGACGCAGAGCCAACCCCGCCTCTCCCTGCAGCTGATGGACGCAGTGATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588201.5
3UTR CCA 90 bp ACACAGTCACCAGCACTATACTCACTCCTAGGGTGGCTCTGTCTGTaGCGTTCCTCACCATCCCCGGGACTCATAGCTCAGTGCCACCCC +
Preference number: 1 (lower is better)
Translates to: TQSPALYSLLGWLCL*RSSPSPGLIAQCHP
Trigger: GGGGTGGCACTGAGCTATGAGTCCCGGGGATGGTGAGGAACGCCACAGACAGAGCCACCCTAGGAGTGAGTATAGTGCTGGTGACTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
3UTR CCA 90 bp AGTGTCCATTCCCGGCAGTGCAAATGTGTTAGGTGGGGTAGGGGGTaGGATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGGCTGGT +
Preference number: 1 (lower is better)
Translates to: SVHSRQCKCVRWGRG*DREINSSLALALAG
Trigger: ACCAGCCAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATCCCACCCCCTACCCCACCTAACACATTTGCACTGCCGGGAATGGACACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
3UTR CCA 90 bp CCTGGCACTTCCAGTGTCCATTCCCGGCAGTGCAAATGTGTTAGGTaGGGTAGGGGGTGGGATAGGGAGATAAATAGCAGCCTGGCGTTG +
Preference number: 1 (lower is better)
Translates to: PGTSSVHSRQCKCVR*GRGWDREINSSLAL
Trigger: CAACGCCAGGCTGCTATTTATCTCCCTATCCCACCCCCTACCCCACCTAACACATTTGCACTGCCGGGAATGGACACTGGAAGTGCCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
3UTR CCA 90 bp TGGGGCTATGAAACACAGTCACCAGCACTATACTCACTCCTAGGGTaGCTCTGTCTGTGGCGTTCCTCACCATCCCCGGGACTCATAGCT +
Preference number: 1 (lower is better)
Translates to: WGYETQSPALYSLLG*LCLWRSSPSPGLIA
Trigger: AGCTATGAGTCCCGGGGATGGTGAGGAACGCCACAGACAGAGCCACCCTAGGAGTGAGTATAGTGCTGGTGACTGTGTTTCATAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
3UTR TCA 90 bp GAGTCTGATGATCTTTATTTCTTAGACAGCCCTGGACTGGGGCTATaGAACACAGTCACCAGCACTATACTCACTCCTAGGGTGGCTCTG +
Preference number: 1 (lower is better)
Translates to: ESDDLYFLDSPGLGL*NTVTSTILTPRVAL
Trigger: CAGAGCCACCCTAGGAGTGAGTATAGTGCTGGTGACTGTGTTTCATAGCCCCAGTCCAGGGCTGTCTAAGAAATAAAGATCATCAGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322048.12
ENST00000587843.5
3UTR-3UTR CCA 90 bp CATCCGCGTGAGGCCGCTGGCGGCGATCTCGGGGAGGGTGAGGGTGGCGGGGGTGCCTGGCGTTGGCACTaGCTGGTGCTCTGTGGTGGG +
Preference number: 2 (lower is better)
Translates to: HPREAAGGDLGEGEGGGGAWRWH*LVLCGG
Trigger: CCCACCACAGAGCACCAGCCAGTGCCAACGCCAGGC...ACCCCCGCCACCCTCACCCTCCCCGAGATCGCCGCCAGCGGCCTCACGCGGATG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
3UTR-3UTR TCA 90 bp CAGGCGCTGAGAGCCCCACTCGAACATGGCCCCAGGGCTATGCAGCACCGCGCCGCTCTGTGGTGGGTATaGGTAGGGGACGGGGCCGCC +
Preference number: 2 (lower is better)
Translates to: QALRAPLEHGPRAMQHRAALWWV*VGDGAA
Trigger: GGCGGCCCCGTCCCCTACTCATACCCACCACAGAGC...GGCGCGGTGCTGCATAGCCCTGGGGCCATGTTCGAGTGGGGCTCTCAGCGCCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
3UTR-3UTR TCA 90 bp CATCCGCGTGAGGCCGCTGGCGGCGATCTCGGGGAGGGTGAGGGTGGCGGGGGTCGCCTGGCCCTGTCCTaGGTCCAAAGATTCCCATGG +
Preference number: 2 (lower is better)
Translates to: HPREAAGGDLGEGEGGGGRLALS*VQRFPW
Trigger: CCATGGGAATCTTTGGACTCAGGACAGGGCCAGGCG...ACCCCCGCCACCCTCACCCTCCCCGAGATCGCCGCCAGCGGCCTCACGCGGATG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587843.5
3UTR-3UTR CCA 90 bp CCCACTCGAACATGGCCCCAGGGCTATGCAGCACCGCGCCCCCAGCTGGGCGGATGCAGGGCATGCAGCTaGTACACCGTGAGGCAGAGC +
Preference number: 2 (lower is better)
Translates to: PTRTWPQGYAAPRPQLGGCRACS*YTVRQS
Trigger: GCTCTGCCTCACGGTGTACCAGCTGCATGCCCTGCA...TCCGCCCAGCTGGGGGCGCGGTGCTGCATAGCCCTGGGGCCATGTTCGAGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
3UTR-3UTR TCA 90 bp GTTGACCAGCAGGTCGGACGGCAGGGCAGGGGCGAACATCCGCGTGAGGCCGCTCGGAGATCTTGTCCTTaGGCTGCTGGCAGAGCTGCA +
Preference number: 2 (lower is better)
Translates to: VDQQVGRQGRGEHPREAARRSCP*AAGRAA
Trigger: TGCAGCTCTGCCAGCAGCTCAAGGACAAGATCTCCG...AGCGGCCTCACGCGGATGTTCGCCCCTGCCCTGCCGTCCGACCTGCTGGTCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
3UTR-3UTR CCA 90 bp CCCACTCGAACATGGCCCCAGGGCTATGCAGCACCGCGCCCCCAGCTGGGCGGAATCAGAGGGCGGTGTTaGGAATGTGGGACACCCTTG +
Preference number: 2 (lower is better)
Translates to: PTRTWPQGYAAPRPQLGGIRGRC*ECGTPL
Trigger: CAAGGGTGTCCCACATTCCCAACACCGCCCTCTGAT...TCCGCCCAGCTGGGGGCGCGGTGCTGCATAGCCCTGGGGCCATGTTCGAGTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587843.5
3UTR-3UTR TCA 90 bp GATTCCCATGGTGATCAGAGGGCGGTGTTGGGAATGTGGGACACCCTTGGCCCCGCTCTGTGGTGGGTATaGGTAGGGGACGGGGCCGCC +
Preference number: 2 (lower is better)
Translates to: DSHGDQRAVLGMWDTLGPALWWV*VGDGAA
Trigger: GGCGGCCCCGTCCCCTACTCATACCCACCACAGAGC...GGGGCCAAGGGTGTCCCACATTCCCAACACCGCCCTCTGATCACCATGGGAATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
3UTR-3UTR CCA 90 bp GTTGATGTAGACGTTGACCAGCAGGTCGGACGGCAGGGCAGGGGCGAACATCCGGCGGTGTTGGGAATGTaGGACACCCTTGGCCCCGCC +
Preference number: 2 (lower is better)
Translates to: VDVDVDQQVGRQGRGEHPAVLGM*DTLGPA
Trigger: GGCGGGGCCAAGGGTGTCCCACATTCCCAACACCGC...CGGATGTTCGCCCCTGCCCTGCCGTCCGACCTGCTGGTCAACGTCTACATCAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587843.5
3UTR-3UTR CCA 90 bp TCACTGCGTCCATCAGCTGCAGGGAGAGGCGGGGTTGGCTCTGCGTCCTCCCGTGCCGGTTTCGGGCTCTaGTCAGCTGCAGCATCACTG +
Preference number: 2 (lower is better)
Translates to: SLRPSAAGRGGVGSASSRAGFGL*SAAASL
Trigger: CAGTGATGCTGCAGCTGACCAGAGCCCGAAACCGGC...ACGGGAGGACGCAGAGCCAACCCCGCCTCTCCCTGCAGCTGATGGACGCAGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588201.5
3UTR-3UTR TCA 90 bp GGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACGTGGCTCACCTCAGACCAGGGCGTCGTTaGGCCAGGGGATCACGCACT +
Preference number: 2 (lower is better)
Translates to: GVVEPGDHALHFVHVAHLRPGRR*ARGSRT
Trigger: AGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCT...GAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
3UTR-3UTR TCA 90 bp GTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACGTGGCTCACCTCCAGGCGCCTCAGCGCCCGTCTTaGACTGGTAGCTCTGGTCCC +
Preference number: 2 (lower is better)
Translates to: VEPGDHALHFVHVAHLQAPQRPS*TGSSGP
Trigger: GGGACCAGAGCTACCAGTTCAAGACGGGCGCTGAGG...CGCCTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
3UTR-3UTR TCA 90 bp TGGTGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTGCGTCCATCAGCTTaGGGACCTCAGCGCCCGTCT +
Preference number: 2 (lower is better)
Translates to: WCSVVGMSRGRGRLPGDKLRPSA*GPQRPS
Trigger: AGACGGGCGCTGAGGTCCTCAAGCTGATGGACGCAG...CTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCACAGAGCACCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587843.5
3UTR-3UTR CCA 90 bp CTGGTCAGCTGCAGCATCACTGCGTCCATCAGCTGCAGGGAGAGGCGGGGTTGGTGCAGGGCATGCAGCTaGTACACCGTGAGGCAGAGC +
Preference number: 2 (lower is better)
Translates to: LVSCSITASISCRERRGWCRACS*YTVRQS
Trigger: GCTCTGCCTCACGGTGTACCAGCTGCATGCCCTGCA...CCAACCCCGCCTCTCCCTGCAGCTGATGGACGCAGTGATGCTGCAGCTGACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588201.5
3UTR CAA 90 bp CCCTGTCCTGAGTCCAAAGATTCCCATGGTGATCAGAGGGCGGTGTaGGGAATGTGGGACACCCTTGGCCCCGCCTCCCTGACCTCCCCA +
Preference number: 2 (lower is better)
Translates to: PCPESKDSHGDQRAV*GMWDTLGPASLTSP
Trigger: TGGGGAGGTCAGGGAGGCGGGGCCAAGGGTGTCCCACATTCCCAACACCGCCCTCTGATCACCATGGGAATCTTTGGACTCAGGACAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
3UTR-3UTR TCA 90 bp CCTCCTGGCACTTCCAGTGTCCATTCCCGGCAGTGCAAATGTGTTAGGTGGGGTGCTCTGTGGTGGGTATaGGTAGGGGACGGGGCCGCC +
Preference number: 2 (lower is better)
Translates to: PPGTSSVHSRQCKCVRWGALWWV*VGDGAA
Trigger: GGCGGCCCCGTCCCCTACTCATACCCACCACAGAGC...ACCCCACCTAACACATTTGCACTGCCGGGAATGGACACTGGAAGTGCCAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
3UTR-3UTR TCA 90 bp GTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACGTGGCTCACCTCCAGGCGCGCCTGGCCCTGTCCTaGGTCCAAAGATTCCCATGG +
Preference number: 2 (lower is better)
Translates to: VEPGDHALHFVHVAHLQARLALS*VQRFPW
Trigger: CCATGGGAATCTTTGGACTCAGGACAGGGCCAGGCG...CGCCTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587377.5
ENST00000587843.5
3UTR-3UTR GCA 90 bp GTCCATCAGCTGCAGGGAGAGGCGGGGTTGGCTCTGCGTCCTCCCGTGTCCCCAAGACAAGCTCCTGGGTaGTGTGATCAGAAGGGTCTG +
Preference number: 2 (lower is better)
Translates to: VHQLQGEAGLALRPPVSPRQAPG*CDQKGL
Trigger: CAGACCCTTCTGATCACAGCACCCAGGAGCTTGTCT...TGGGGACACGGGAGGACGCAGAGCCAACCCCGCCTCTCCCTGCAGCTGATGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588201.5
3UTR-3UTR GCA 90 bp TGGTGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGTCCCGGAAGGCGAAGTaGAGCAGCTGGTTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: WCSVVGMSRGRGRLPGDKSRKAK*SSWLFR
Trigger: CCGGAACAACCAGCTGCTGCACTTCGCCTTCCGGGA...CTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCACAGAGCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
3UTR-3UTR GCA 90 bp GTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACGTGGCTCACCTCCAGGCGTGCTGCAGCTTCCACTaGTTGTCCTCCCGGAAGGCG +
Preference number: 2 (lower is better)
Translates to: VEPGDHALHFVHVAHLQACCSFH*LSSRKA
Trigger: CGCCTTCCGGGAGGACAAGCAGTGGAAGCTGCAGCA...CGCCTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
3UTR-3UTR CCA 90 bp TGGTGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGGGCGTTGGCACTGGCTaGTGCTCTGTGGTGGGTATG +
Preference number: 2 (lower is better)
Translates to: WCSVVGMSRGRGRLPGDKGVGTG*CSVVGM
Trigger: CATACCCACCACAGAGCACCAGCCAGTGCCAACGCC...CTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCACAGAGCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
3UTR-3UTR CCA 90 bp GGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACGTGGCTCACCTCGCCGGTTTCGGGCTCTaGTCAGCTGCAGCATCACTG +
Preference number: 2 (lower is better)
Translates to: GVVEPGDHALHFVHVAHLAGFGL*SAAASL
Trigger: CAGTGATGCTGCAGCTGACCAGAGCCCGAAACCGGC...GAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
3UTR CAA 90 bp CAGCTGCAGCATCACTGCGTCCATCAGCTGCAGGGAGAGGCGGGGTaGGCTCTGCGTCCTCCCGTGTCCCCATGCATTAAGGAACAACAG +
Preference number: 2 (lower is better)
Translates to: QLQHHCVHQLQGEAG*ALRPPVSPCIKEQQ
Trigger: CTGTTGTTCCTTAATGCATGGGGACACGGGAGGACGCAGAGCCAACCCCGCCTCTCCCTGCAGCTGATGGACGCAGTGATGCTGCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588201.5
3UTR-3UTR GCA 90 bp GTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACGTGGCTCACCTCCAGGCGACGCACTCCACTTTGTaGACGTGGCTCACCTCCAGG +
Preference number: 2 (lower is better)
Translates to: VEPGDHALHFVHVAHLQATHSTL*TWLTSR
Trigger: CCTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCGT...CGCCTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
3UTR-3UTR GCA 90 bp GATTCCCATGGTGATCAGAGGGCGGTGTTGGGAATGTGGGACACCCTTGGCCCCTCCCGGAAGGCGAAGTaGAGCAGCTGGTTGTTCCGG +
Preference number: 2 (lower is better)
Translates to: DSHGDQRAVLGMWDTLGPSRKAK*SSWLFR
Trigger: CCGGAACAACCAGCTGCTGCACTTCGCCTTCCGGGA...GGGGCCAAGGGTGTCCCACATTCCCAACACCGCCCTCTGATCACCATGGGAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587843.5
3UTR-3UTR CCA 90 bp GTGAGCCGGTTTCGGGCTCTGGTCAGCTGCAGCATCACTGCGTCCATCAGCTTGGGCGTTGGCACTGGCTaGTGCTCTGTGGTGGGTATG +
Preference number: 2 (lower is better)
Translates to: VSRFRALVSCSITASISLGVGTG*CSVVGM
Trigger: CATACCCACCACAGAGCACCAGCCAGTGCCAACGCC...CAAGCTGATGGACGCAGTGATGCTGCAGCTGACCAGAGCCCGAAACCGGCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587843.5
3UTR-3UTR TCA 90 bp TGTCCTGAGTCCAAAGATTCCCATGGTGATCAGAGGGCGGTGTTGGGAATGTGGGCTCTGTGGTGGGTATaGGTAGGGGACGGGGCCGCC +
Preference number: 2 (lower is better)
Translates to: CPESKDSHGDQRAVLGMWALWWV*VGDGAA
Trigger: GGCGGCCCCGTCCCCTACTCATACCCACCACAGAGC...CCACATTCCCAACACCGCCCTCTGATCACCATGGGAATCTTTGGACTCAGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
3UTR-3UTR GCA 90 bp TGGTGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGGTTGGCACTGGCTGGTaGTCTGTGGTGGGTATGAGT +
Preference number: 2 (lower is better)
Translates to: WCSVVGMSRGRGRLPGDKVGTGW*SVVGMS
Trigger: ACTCATACCCACCACAGAGCACCAGCCAGTGCCAAC...CTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCACAGAGCACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
3UTR-3UTR GCA 90 bp GAGCCAGGGGATCACGCACTCCACTTTGTGCACGTGGCTCACCTCCAGGCGCTGAGACAAGCTCCTGGGTaGTGTGATCAGAAGGGTCTG +
Preference number: 2 (lower is better)
Translates to: EPGDHALHFVHVAHLQALRQAPG*CDQKGL
Trigger: CAGACCCTTCTGATCACAGCACCCAGGAGCTTGTCT...CAGCGCCTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGATCCCCTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
3UTR-3UTR CCA 90 bp GGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACGTGGCTCACCTCATCAGAGGGCGGTGTTaGGAATGTGGGACACCCTTG +
Preference number: 2 (lower is better)
Translates to: GVVEPGDHALHFVHVAHLIRGRC*ECGTPL
Trigger: CAAGGGTGTCCCACATTCCCAACACCGCCCTCTGAT...GAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587377.5
ENST00000587843.5
3UTR-3UTR TCA 90 bp AAAGATTCCCATGGTGATCAGAGGGCGGTGTTGGGAATGTGGGACACCCTTGGCGCTGCAGGGAGACGGTaGAGTAGACCAGGGCGTCGT +
Preference number: 2 (lower is better)
Translates to: KDSHGDQRAVLGMWDTLGAAGRR*SRPGRR
Trigger: ACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAGC...GCCAAGGGTGTCCCACATTCCCAACACCGCCCTCTGATCACCATGGGAATCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587377.5
ENST00000587843.5
3UTR-3UTR TCA 90 bp ACAGTCACCAGCACTATACTCACTCCTAGGGTGGCTCTGTCTGTGGCGTTCCTCCCTCAGCGCCCGTCTTaGACTGGTAGCTCTGGTCCC +
Preference number: 2 (lower is better)
Translates to: TVTSTILTPRVALSVAFLPQRPS*TGSSGP
Trigger: GGGACCAGAGCTACCAGTTCAAGACGGGCGCTGAGG...GAGGAACGCCACAGACAGAGCCACCCTAGGAGTGAGTATAGTGCTGGTGACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587843.5
3UTR-3UTR CCA 90 bp TGTCCTGAGTCCAAAGATTCCCATGGTGATCAGAGGGCGGTGTTGGGAATGTGGGCCTGGCGTTGGCACTaGCTGGTGCTCTGTGGTGGG +
Preference number: 2 (lower is better)
Translates to: CPESKDSHGDQRAVLGMWAWRWH*LVLCGG
Trigger: CCCACCACAGAGCACCAGCCAGTGCCAACGCCAGGC...CCACATTCCCAACACCGCCCTCTGATCACCATGGGAATCTTTGGACTCAGGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
3UTR-3UTR CCA 90 bp GCCCTGGACTGGGGCTATGAAACACAGTCACCAGCACTATACTCACTCCTAGGGAATGTGGGACACCCTTaGCCCCGCCTCCCTGACCTC +
Preference number: 2 (lower is better)
Translates to: ALDWGYETQSPALYSLLGNVGHP*PRLPDL
Trigger: GAGGTCAGGGAGGCGGGGCCAAGGGTGTCCCACATT...CCCTAGGAGTGAGTATAGTGCTGGTGACTGTGTTTCATAGCCCCAGTCCAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
3UTR-3UTR CCA 90 bp AACATGGCCCCAGGGCTATGCAGCACCGCGCCCCCAGCTGGGCGGAAGTTCTTGTGTAGCTCCAGTAGCTaGAGAACACGGAGATCTTGT +
Preference number: 2 (lower is better)
Translates to: NMAPGLCSTAPPAGRKFLCSSSS*RTRRSC
Trigger: ACAAGATCTCCGTGTTCTCCAGCTACTGGAGCTACA...CAAGAACTTCCGCCCAGCTGGGGGCGCGGTGCTGCATAGCCCTGGGGCCATGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
3UTR CAA 90 bp AGCTTCCACTGCTTGTCCTCCCGGAAGGCGAAGTGCAGCAGCTGGTaGTTCCGGGGCATCTTCAGGTTCACATCCGTGTGCAAAGAACCC +
Preference number: 2 (lower is better)
Translates to: SFHCLSSRKAKCSSW*FRGIFRFTSVCKEP
Trigger: GGGTTCTTTGCACACGGATGTGAACCTGAAGATGCCCCGGAACAACCAGCTGCTGCACTTCGCCTTCCGGGAGGACAAGCAGTGGAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588201.5
3UTR-3UTR GCA 90 bp TTGTTCCGGGGCATCTTCAGGTTCACATCCGTGTGCAAAGAACCCCTCTCCTGCTGCTGCAGCTTCCACTaGTTGTCCTCCCGGAAGGCG +
Preference number: 2 (lower is better)
Translates to: LFRGIFRFTSVCKEPLSCCCSFH*LSSRKA
Trigger: CGCCTTCCGGGAGGACAAGCAGTGGAAGCTGCAGCA...GCAGGAGAGGGGTTCTTTGCACACGGATGTGAACCTGAAGATGCCCCGGAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588201.5
3UTR-3UTR GCA 90 bp CGGAAGTTCTTGGTGGAGTTGGGCTGCAGGGCATGCAGCTGGTACACCGTGAGGAGGTTCACATCCGTGTaGAAAGAACCCCTCTCCTGC +
Preference number: 2 (lower is better)
Translates to: RKFLVELGCRACSWYTVRRFTSV*KEPLSC
Trigger: GCAGGAGAGGGGTTCTTTGCACACGGATGTGAACCT...CCTCACGGTGTACCAGCTGCATGCCCTGCAGCCCAACTCCACCAAGAACTTCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588201.5
3UTR-3UTR CCA 90 bp TGTCCTGAGTCCAAAGATTCCCATGGTGATCAGAGGGCGGTGTTGGGAATGTGGAATGTGGGACACCCTTaGCCCCGCCTCCCTGACCTC +
Preference number: 2 (lower is better)
Translates to: CPESKDSHGDQRAVLGMWNVGHP*PRLPDL
Trigger: GAGGTCAGGGAGGCGGGGCCAAGGGTGTCCCACATT...CCACATTCCCAACACCGCCCTCTGATCACCATGGGAATCTTTGGACTCAGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
3UTR-3UTR TCA 90 bp GCCCTGGACTGGGGCTATGAAACACAGTCACCAGCACTATACTCACTCCTAGGGCGGAGATCTTGTCCTTaGGCTGCTGGCAGAGCTGCA +
Preference number: 2 (lower is better)
Translates to: ALDWGYETQSPALYSLLGRRSCP*AAGRAA
Trigger: TGCAGCTCTGCCAGCAGCTCAAGGACAAGATCTCCG...CCCTAGGAGTGAGTATAGTGCTGGTGACTGTGTTTCATAGCCCCAGTCCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587377.5
ENST00000587843.5
3UTR-3UTR GCA 90 bp ACAGTCACCAGCACTATACTCACTCCTAGGGTGGCTCTGTCTGTGGCGTTCCTCACGCACTCCACTTTGTaGACGTGGCTCACCTCCAGG +
Preference number: 2 (lower is better)
Translates to: TVTSTILTPRVALSVAFLTHSTL*TWLTSR
Trigger: CCTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCGT...GAGGAACGCCACAGACAGAGCCACCCTAGGAGTGAGTATAGTGCTGGTGACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587377.5
ENST00000587843.5
3UTR-3UTR CCA 90 bp ACAGTCACCAGCACTATACTCACTCCTAGGGTGGCTCTGTCTGTGGCGTTCCTCATAGCAGCCTGGCGTTaGCACTGGCTGGTGCTCTGT +
Preference number: 2 (lower is better)
Translates to: TVTSTILTPRVALSVAFLIAAWR*HWLVLC
Trigger: ACAGAGCACCAGCCAGTGCCAACGCCAGGCTGCTAT...GAGGAACGCCACAGACAGAGCCACCCTAGGAGTGAGTATAGTGCTGGTGACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
3UTR-3UTR CCA 90 bp CCTCCTGGCACTTCCAGTGTCCATTCCCGGCAGTGCAAATGTGTTAGGTGGGGTTACTCACTCCTAGGGTaGCTCTGTCTGTGGCGTTCC +
Preference number: 2 (lower is better)
Translates to: PPGTSSVHSRQCKCVRWGYSLLG*LCLWRS
Trigger: GGAACGCCACAGACAGAGCCACCCTAGGAGTGAGTA...ACCCCACCTAACACATTTGCACTGCCGGGAATGGACACTGGAAGTGCCAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
3UTR-3UTR TCA 90 bp GCCCTGGACTGGGGCTATGAAACACAGTCACCAGCACTATACTCACTCCTAGGGCAAAGATTCCCATGGTaGTCAGAGGGCGGTGTTGGG +
Preference number: 2 (lower is better)
Translates to: ALDWGYETQSPALYSLLGQRFPW*SEGGVG
Trigger: CCCAACACCGCCCTCTGATCACCATGGGAATCTTTG...CCCTAGGAGTGAGTATAGTGCTGGTGACTGTGTTTCATAGCCCCAGTCCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
3UTR-3UTR CCA 90 bp TATGAAACACAGTCACCAGCACTATACTCACTCCTAGGGTGGCTCTGTCTGTGGGGGTGGCTCTGTCTGTaGCGTTCCTCACCATCCCCG +
Preference number: 2 (lower is better)
Translates to: YETQSPALYSLLGWLCLWGWLCL*RSSPSP
Trigger: CGGGGATGGTGAGGAACGCCACAGACAGAGCCACCC...CCACAGACAGAGCCACCCTAGGAGTGAGTATAGTGCTGGTGACTGTGTTTCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
3UTR-3UTR CCA 90 bp GATTCCCATGGTGATCAGAGGGCGGTGTTGGGAATGTGGGACACCCTTGGCCCCTGTAGCTCCAGTAGCTaGAGAACACGGAGATCTTGT +
Preference number: 2 (lower is better)
Translates to: DSHGDQRAVLGMWDTLGPCSSSS*RTRRSC
Trigger: ACAAGATCTCCGTGTTCTCCAGCTACTGGAGCTACA...GGGGCCAAGGGTGTCCCACATTCCCAACACCGCCCTCTGATCACCATGGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587377.5
ENST00000587843.5
3UTR-3UTR CCA 90 bp GTAGCTCTGGTCCCGGCTGGTAAGCAGGTAAATGGCTTGGCTCACATGGTTTCTGCGAAGTGCAGCAGCTaGTTGTTCCGGGGCATCTTC +
Preference number: 2 (lower is better)
Translates to: VALVPAGKQVNGLAHMVSAKCSS*LFRGIF
Trigger: GAAGATGCCCCGGAACAACCAGCTGCTGCACTTCGC...AGAAACCATGTGAGCCAAGCCATTTACCTGCTTACCAGCCGGGACCAGAGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
3UTR-3UTR CCA 90 bp CCTCCTGGCACTTCCAGTGTCCATTCCCGGCAGTGCAAATGTGTTAGGTGGGGTTGGTTTCTGGCATCCTaGATCTGCTGCAGCTTCCAC +
Preference number: 2 (lower is better)
Translates to: PPGTSSVHSRQCKCVRWGWFLAS*ICCSFH
Trigger: GTGGAAGCTGCAGCAGATCCAGGATGCCAGAAACCA...ACCCCACCTAACACATTTGCACTGCCGGGAATGGACACTGGAAGTGCCAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
3UTR CAA 90 bp CTTGAACTGGTAGCTCTGGTCCCGGCTGGTAAGCAGGTAAATGGCTaGGCTCACATGGTTTCTGGCATCCTGGATCTGCTGCAGCTTCCA +
Preference number: 2 (lower is better)
Translates to: LELVALVPAGKQVNG*AHMVSGILDLLQLP
Trigger: TGGAAGCTGCAGCAGATCCAGGATGCCAGAAACCATGTGAGCCAAGCCATTTACCTGCTTACCAGCCGGGACCAGAGCTACCAGTTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
3UTR-3UTR GCA 90 bp TGTCCTGAGTCCAAAGATTCCCATGGTGATCAGAGGGCGGTGTTGGGAATGTGGGTTGGCACTGGCTGGTaGTCTGTGGTGGGTATGAGT +
Preference number: 2 (lower is better)
Translates to: CPESKDSHGDQRAVLGMWVGTGW*SVVGMS
Trigger: ACTCATACCCACCACAGAGCACCAGCCAGTGCCAAC...CCACATTCCCAACACCGCCCTCTGATCACCATGGGAATCTTTGGACTCAGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
3UTR-3UTR GCA 90 bp TCTGTAGCTCCAGTAGCTGGAGAACACGGAGATCTTGTCCTTGAGCTGCTGGCAGTTGGCACTGGCTGGTaGTCTGTGGTGGGTATGAGT +
Preference number: 2 (lower is better)
Translates to: SVAPVAGEHGDLVLELLAVGTGW*SVVGMS
Trigger: ACTCATACCCACCACAGAGCACCAGCCAGTGCCAAC...TGCCAGCAGCTCAAGGACAAGATCTCCGTGTTCTCCAGCTACTGGAGCTACAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
3UTR-3UTR GCA 90 bp GTAGCTCTGGTCCCGGCTGGTAAGCAGGTAAATGGCTTGGCTCACATGGTTTCTATCTTGTCCTTGAGCTaGTGGCAGAGCTGCAGGGAG +
Preference number: 2 (lower is better)
Translates to: VALVPAGKQVNGLAHMVSILSLS*WQSCRE
Trigger: CTCCCTGCAGCTCTGCCAGCAGCTCAAGGACAAGAT...AGAAACCATGTGAGCCAAGCCATTTACCTGCTTACCAGCCGGGACCAGAGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
3UTR-3UTR GCA 90 bp GGTAAGCAGGTAAATGGCTTGGCTCACATGGTTTCTGGCATCCTGGATCTGCTGGCATCCTGGATCTGCTaGAGCTTCCACTGCTTGTCC +
Preference number: 2 (lower is better)
Translates to: GKQVNGLAHMVSGILDLLASWIC*SFHCLS
Trigger: GGACAAGCAGTGGAAGCTGCAGCAGATCCAGGATGC...CAGCAGATCCAGGATGCCAGAAACCATGTGAGCCAAGCCATTTACCTGCTTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
3UTR-3UTR GCA 90 bp TTTCTTAGACAGCCCTGGACTGGGGCTATGAAACACAGTCACCAGCACTATACTTTGGGCTGCAGGGCATaGAGCTGGTACACCGTGAGG +
Preference number: 2 (lower is better)
Translates to: FLRQPWTGAMKHSHQHYTLGCRA*SWYTVR
Trigger: CCTCACGGTGTACCAGCTGCATGCCCTGCAGCCCAA...AGTATAGTGCTGGTGACTGTGTTTCATAGCCCCAGTCCAGGGCTGTCTAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587843.5
3UTR-3UTR GCA 90 bp CTTAGACAGCCCTGGACTGGGGCTATGAAACACAGTCACCAGCACTATACTCACAGACAAGCTCCTGGGTaGTGTGATCAGAAGGGTCTG +
Preference number: 2 (lower is better)
Translates to: LRQPWTGAMKHSHQHYTHRQAPG*CDQKGL
Trigger: CAGACCCTTCTGATCACAGCACCCAGGAGCTTGTCT...GTGAGTATAGTGCTGGTGACTGTGTTTCATAGCCCCAGTCCAGGGCTGTCTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587377.5
ENST00000587843.5
3UTR-3UTR CCA 90 bp TTTCTTAGACAGCCCTGGACTGGGGCTATGAAACACAGTCACCAGCACTATACTATCAGAGGGCGGTGTTaGGAATGTGGGACACCCTTG +
Preference number: 2 (lower is better)
Translates to: FLRQPWTGAMKHSHQHYTIRGRC*ECGTPL
Trigger: CAAGGGTGTCCCACATTCCCAACACCGCCCTCTGAT...AGTATAGTGCTGGTGACTGTGTTTCATAGCCCCAGTCCAGGGCTGTCTAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
3UTR CCA 72 bp CATGGCCCCAGGGCTATGCAGCACCGCGCCCCCAGCTaGGCGGAAGTTCTTGGTGGAGTTGGGCTGCAGGGC +
Preference number: 3 (lower is better)
Translates to: HGPRAMQHRAPS*AEVLGGVGLQG
Trigger: GCCCTGCAGCCCAACTCCACCAAGAACTTCCGCCCAGCTGGGGGCGCGGTGCTGCATAGCCCTGGGGCCATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
3UTR GCA 72 bp GCGGGGGTGGTGAGCCGGTTTCGGGCTCTGGTCAGCTaGAGCATCACTGCGTCCATCAGCTGCAGGGAGAGG +
Preference number: 3 (lower is better)
Translates to: AGVVSRFRALVS*SITASISCRER
Trigger: CCTCTCCCTGCAGCTGATGGACGCAGTGATGCTGCAGCTGACCAGAGCCCGAAACCGGCTCACCACCCCCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588201.5
3UTR TCA 72 bp CTGGCGTTGGCACTGGCTGGTGCTCTGTGGTGGGTATaGGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGC +
Preference number: 3 (lower is better)
Translates to: LALALAGALWWV*VGDGAAFLETS
Trigger: GCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCACAGAGCACCAGCCAGTGCCAACGCCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
3UTR-3UTR CAA 90 bp GCAGCATCACTGCGTCCATCAGCTGCAGGGAGAGGCGGGGTTGGCTCTGCGTCCAATAGCAGCCTGGCGTaGGCACTGGCTGGTGCTCTG +
Preference number: 3 (lower is better)
Translates to: AASLRPSAAGRGGVGSASNSSLA*ALAGAL
Trigger: CAGAGCACCAGCCAGTGCCAACGCCAGGCTGCTATT...GGACGCAGAGCCAACCCCGCCTCTCCCTGCAGCTGATGGACGCAGTGATGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588201.5
3UTR TCA 72 bp CACTCCACTTTGTGCACGTGGCTCACCTCCAGGCGCTaGGAGCCCCACTCGAACATGGCCCCAGGGCTATGC +
Preference number: 3 (lower is better)
Translates to: HSTLCTWLTSRR*EPHSNMAPGLC
Trigger: GCATAGCCCTGGGGCCATGTTCGAGTGGGGCTCTCAGCGCCTGGAGGTGAGCCACGTGCACAAAGTGGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
3UTR GCA 72 bp GCGGGGGTGGTGAGCCGGTTTCGGGCTCTGGTCAGCTaGAGCATCACTGCGTCCATCAGCTTGAGGACCTCA +
Preference number: 3 (lower is better)
Translates to: AGVVSRFRALVS*SITASISLRTS
Trigger: TGAGGTCCTCAAGCTGATGGACGCAGTGATGCTGCAGCTGACCAGAGCCCGAAACCGGCTCACCACCCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587843.5
3UTR GCA 72 bp GCGTCCATCAGCTGCAGGGAGAGGCGGGGTTGGCTCTaGGTCCTCCCGTGTCCCCATGCATTAAGGAACAAC +
Preference number: 3 (lower is better)
Translates to: ASISCRERRGWL*VLPCPHALRNN
Trigger: GTTGTTCCTTAATGCATGGGGACACGGGAGGACGCAGAGCCAACCCCGCCTCTCCCTGCAGCTGATGGACGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588201.5
3UTR CCA 72 bp AACAGACATGGTAGCTCCCACTCCCACCCAGCCCAGTaGCTACTGTTCCCAGGTCCCGAAACCCGGCAGCAG +
Preference number: 3 (lower is better)
Translates to: NRHGSSHSHPAQ*LLFPGPETRQQ
Trigger: CTGCTGCCGGGTTTCGGGACCTGGGAACAGTAGCCACTGGGCTGGGTGGGAGTGGGAGCTACCATGTCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588201.5
3UTR CCA 72 bp ATCACTGCGTCCATCAGCTGCAGGGAGAGGCGGGGTTaGCTCTGCGTCCTCCCGTGTCCCCATGCATTAAGG +
Preference number: 3 (lower is better)
Translates to: ITASISCRERRG*LCVLPCPHALR
Trigger: CCTTAATGCATGGGGACACGGGAGGACGCAGAGCCAACCCCGCCTCTCCCTGCAGCTGATGGACGCAGTGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588201.5
3UTR GCA 72 bp GGGCGGAAGTTCTTGGTGGAGTTGGGCTGCAGGGCATaGAGCTGGTACACCGTGAGGCAGAGCTTGTTGAGG +
Preference number: 3 (lower is better)
Translates to: GRKFLVELGCRA*SWYTVRQSLLR
Trigger: CCTCAACAAGCTCTGCCTCACGGTGTACCAGCTGCATGCCCTGCAGCCCAACTCCACCAAGAACTTCCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
3UTR-3UTR CAA 90 bp CATCACTGCGTCCATCAGCTGCAGGGAGAGGCGGGGTTGGCTCTGCGTCCTCCCAAGCAGGTAAATGGCTaGGCTCACATGGTTTCTGGC +
Preference number: 3 (lower is better)
Translates to: HHCVHQLQGEAGLALRPPKQVNG*AHMVSG
Trigger: GCCAGAAACCATGTGAGCCAAGCCATTTACCTGCTT...GGGAGGACGCAGAGCCAACCCCGCCTCTCCCTGCAGCTGATGGACGCAGTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588201.5
3UTR-3UTR CAA 90 bp GGCACTTCCAGTGTCCATTCCCGGCAGTGCAAATGTGTTAGGTGGGGTAGGGGGAAGTGCAGCAGCTGGTaGTTCCGGGGCATCTTCAGG +
Preference number: 3 (lower is better)
Translates to: GTSSVHSRQCKCVRWGRGKCSSW*FRGIFR
Trigger: CCTGAAGATGCCCCGGAACAACCAGCTGCTGCACTT...CCCCCTACCCCACCTAACACATTTGCACTGCCGGGAATGGACACTGGAAGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
3UTR-3UTR CAA 90 bp AAAGATTCCCATGGTGATCAGAGGGCGGTGTTGGGAATGTGGGACACCCTTGGCAATAGCAGCCTGGCGTaGGCACTGGCTGGTGCTCTG +
Preference number: 3 (lower is better)
Translates to: KDSHGDQRAVLGMWDTLGNSSLA*ALAGAL
Trigger: CAGAGCACCAGCCAGTGCCAACGCCAGGCTGCTATT...GCCAAGGGTGTCCCACATTCCCAACACCGCCCTCTGATCACCATGGGAATCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
3UTR CCA 72 bp CCAGCACTATACTCACTCCTAGGGTGGCTCTGTCTGTaGCGTTCCTCACCATCCCCGGGACTCATAGCTCAG +
Preference number: 3 (lower is better)
Translates to: PALYSLLGWLCL*RSSPSPGLIAQ
Trigger: CTGAGCTATGAGTCCCGGGGATGGTGAGGAACGCCACAGACAGAGCCACCCTAGGAGTGAGTATAGTGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
3UTR CCA 72 bp TCCCGGCAGTGCAAATGTGTTAGGTGGGGTAGGGGGTaGGATAGGGAGATAAATAGCAGCCTGGCGTTGGCA +
Preference number: 3 (lower is better)
Translates to: SRQCKCVRWGRG*DREINSSLALA
Trigger: TGCCAACGCCAGGCTGCTATTTATCTCCCTATCCCACCCCCTACCCCACCTAACACATTTGCACTGCCGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
3UTR CCA 72 bp GAAACACAGTCACCAGCACTATACTCACTCCTAGGGTaGCTCTGTCTGTGGCGTTCCTCACCATCCCCGGGA +
Preference number: 3 (lower is better)
Translates to: ETQSPALYSLLG*LCLWRSSPSPG
Trigger: TCCCGGGGATGGTGAGGAACGCCACAGACAGAGCCACCCTAGGAGTGAGTATAGTGCTGGTGACTGTGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
3UTR-3UTR CAA 90 bp AGACAGCCCTGGACTGGGGCTATGAAACACAGTCACCAGCACTATACTCACTCCGATCAGAGGGCGGTGTaGGGAATGTGGGACACCCTT +
Preference number: 3 (lower is better)
Translates to: RQPWTGAMKHSHQHYTHSDQRAV*GMWDTL
Trigger: AAGGGTGTCCCACATTCCCAACACCGCCCTCTGATC...GGAGTGAGTATAGTGCTGGTGACTGTGTTTCATAGCCCCAGTCCAGGGCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
3UTR-3UTR CAA 90 bp GTAGCTCTGGTCCCGGCTGGTAAGCAGGTAAATGGCTTGGCTCACATGGTTTCTATCACGCACTCCACTTaGTGCACGTGGCTCACCTCC +
Preference number: 3 (lower is better)
Translates to: VALVPAGKQVNGLAHMVSITHST*CTWLTS
Trigger: GGAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGAT...AGAAACCATGTGAGCCAAGCCATTTACCTGCTTACCAGCCGGGACCAGAGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
3UTR-3UTR CAA 90 bp AGACAGCCCTGGACTGGGGCTATGAAACACAGTCACCAGCACTATACTCACTCCACGGAGATCTTGTCCTaGAGCTGCTGGCAGAGCTGC +
Preference number: 3 (lower is better)
Translates to: RQPWTGAMKHSHQHYTHSTEILS*SCWQSC
Trigger: GCAGCTCTGCCAGCAGCTCAAGGACAAGATCTCCGT...GGAGTGAGTATAGTGCTGGTGACTGTGTTTCATAGCCCCAGTCCAGGGCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587377.5
ENST00000587843.5
3UTR CCA 72 bp AAGTTCTTGGTGGAGTTGGGCTGCAGGGCATGCAGCTaGTACACCGTGAGGCAGAGCTTGTTGAGGTTGATG +
Preference number: 3 (lower is better)
Translates to: KFLVELGCRACS*YTVRQSLLRLM
Trigger: CATCAACCTCAACAAGCTCTGCCTCACGGTGTACCAGCTGCATGCCCTGCAGCCCAACTCCACCAAGAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp CATCCGCGTGAGGCCGCTGGCGGCGATCTCGGGGAGGGTGAGGGTGGCGGGGGTTCCCGGAAGGCGAAGTaGAGCAGCTGGTTGTTCCGG +
Preference number: 4 (lower is better)
Translates to: HPREAAGGDLGEGEGGGGSRKAK*SSWLFR
Trigger: CCGGAACAACCAGCTGCTGCACTTCGCCTTCCGGGA...ACCCCCGCCACCCTCACCCTCCCCGAGATCGCCGCCAGCGGCCTCACGCGGATG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp AGGGTGAGGGTGGCGGGGGTGGTGAGCCGGTTTCGGGCTCTGGTCAGCTGCAGCATGGCCCCAGGGCTATaGAGCACCGCGCCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RVRVAGVVSRFRALVSCSMAPGL*STAPPA
Trigger: AGCTGGGGGCGCGGTGCTGCATAGCCCTGGGGCCAT...GCTGCAGCTGACCAGAGCCCGAAACCGGCTCACCACCCCCGCCACCCTCACCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GTTGACCAGCAGGTCGGACGGCAGGGCAGGGGCGAACATCCGCGTGAGGCCGCTGCGTGCACCTCGTCGTaGAGCAGCCAGCGGAACTCC +
Preference number: 4 (lower is better)
Translates to: VDQQVGRQGRGEHPREAAACTSS*SSQRNS
Trigger: GGAGTTCCGCTGGCTGCTGCACGACGAGGTGCACGC...AGCGGCCTCACGCGGATGTTCGCCCCTGCCCTGCCGTCCGACCTGCTGGTCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GAGCCAGGGGATCACGCACTCCACTTTGTGCACGTGGCTCACCTCCAGGCGCTGCCATCACGGTGGCCATaGCCGCAGGCCGCCGCCGAG +
Preference number: 4 (lower is better)
Translates to: EPGDHALHFVHVAHLQALPSRWP*PQAAAE
Trigger: CTCGGCGGCGGCCTGCGGCCATGGCCACCGTGATGG...CAGCGCCTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGATCCCCTGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTGCTCCATCACGGTGGCCATaGCCGCAGGCCGCCGCCGAG +
Preference number: 4 (lower is better)
Translates to: VGMSRGRGRLPGDKLLGAPSRWP*PQAAAE
Trigger: CTCGGCGGCGGCCTGCGGCCATGGCCACCGTGATGG...AGCACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR TCA 90 bp CGTCCATCAGCTGCAGGGAGAGGCGGGGTTGGCTCTGCGTCCTCCCGTGTCCCCCCTCAGCGCCCGTCTTaGACTGGTAGCTCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: RPSAAGRGGVGSASSRVPPQRPS*TGSSGP
Trigger: GGGACCAGAGCTACCAGTTCAAGACGGGCGCTGAGG...GGGGACACGGGAGGACGCAGAGCCAACCCCGCCTCTCCCTGCAGCTGATGGACG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000588201.5
CDS-3UTR TCA 90 bp GGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACGGGTGGCGGGGGTGGTaGGCCGGTTTCGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GDGEVDQGVVEPGDHALHGWRGW*AGFGLW
Trigger: CCAGAGCCCGAAACCGGCTCACCACCCCCGCCACCC...GTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR TCA 90 bp GAGCTGCAGGGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGGGTGGCGGGGGTGGTaGGCCGGTTTCGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: ELQGDGEVDQGVVEPGDHGWRGW*AGFGLW
Trigger: CCAGAGCCCGAAACCGGCTCACCACCCCCGCCACCC...GTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR TCA 90 bp CATCCGCGTGAGGCCGCTGGCGGCGATCTCGGGGAGGGTGAGGGTGGCGGGGGTTCCCGGGAGAAGGTGTaGGGGTTGCTGTCATTTTCC +
Preference number: 4 (lower is better)
Translates to: HPREAAGGDLGEGEGGGGSREKV*GLLSFS
Trigger: GGAAAATGACAGCAACCCTCACACCTTCTCCCGGGA...ACCCCCGCCACCCTCACCCTCCCCGAGATCGCCGCCAGCGGCCTCACGCGGATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000588201.5
CDS-3UTR CCA 90 bp GGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTGCTGTGTCGCTGCCATCACGGTaGCCATGGCCGCAGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GMSRGRGRLPGDKLLGAVSLPSR*PWPQAA
Trigger: GGCGGCCTGCGGCCATGGCCACCGTGATGGCAGCGA...CACAGCACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp ACATGGCCCCAGGGCTATGCAGCACCGCGCCCCCAGCTGGGCGGAAGTTCTTGGCACCGCGCCCCCAGCTaGGCGGAAGTTCTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: TWPQGYAAPRPQLGGSSWHRAPS*AEVLGG
Trigger: TCCACCAAGAACTTCCGCCCAGCTGGGGGCGCGGTG...CCAAGAACTTCCGCCCAGCTGGGGGCGCGGTGCTGCATAGCCCTGGGGCCATGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
CDS-3UTR TCA 90 bp GTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTCGGAGCCCGGCAGAGTaGAGCGCAGAGAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: VVGMSRGRGRLPGDKLLGRSPAE*SAERPP
Trigger: AGGAGGCCTCTCTGCGCTTCACTCTGCCGGGCTCCG...ACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR TCA 90 bp GTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTGCTCTGTGGTGGGTATaGGTAGGGGACGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: VVGMSRGRGRLPGDKLLGALWWV*VGDGAA
Trigger: GGCGGCCCCGTCCCCTACTCATACCCACCACAGAGC...ACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
CDS-3UTR GCA 90 bp AACATGGCCCCAGGGCTATGCAGCACCGCGCCCCCAGCTGGGCGGAAGTTCTTGGCGTGCACCTCGTCGTaGAGCAGCCAGCGGAACTCC +
Preference number: 4 (lower is better)
Translates to: NMAPGLCSTAPPAGRKFLACTSS*SSQRNS
Trigger: GGAGTTCCGCTGGCTGCTGCACGACGAGGTGCACGC...CAAGAACTTCCGCCCAGCTGGGGGCGCGGTGCTGCATAGCCCTGGGGCCATGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GTTGACCAGCAGGTCGGACGGCAGGGCAGGGGCGAACATCCGCGTGAGGCCGCTTTGGGCTGCAGGGCATaGAGCTGGTACACCGTGAGG +
Preference number: 4 (lower is better)
Translates to: VDQQVGRQGRGEHPREAALGCRA*SWYTVR
Trigger: CCTCACGGTGTACCAGCTGCATGCCCTGCAGCCCAA...AGCGGCCTCACGCGGATGTTCGCCCCTGCCCTGCCGTCCGACCTGCTGGTCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
CDS-3UTR TCA 90 bp CAGCCTGGCGTTGGCACTGGCTGGTGCTCTGTGGTGGGTATGAGTAGGGGACGGTCACATCCGCCTGGCTaGGGGCATCCCCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: QPGVGTGWCSVVGMSRGRSHPPG*GHPPAE
Trigger: CTCTGCAGGGGGATGCCCTCAGCCAGGCGGATGTGA...CCGTCCCCTACTCATACCCACCACAGAGCACCAGCCAGTGCCAACGCCAGGCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322048.12
ENST00000587377.5
CDS-3UTR TCA 90 bp GACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGGGTGGCGGGGGTGGTaGGCCGGTTTCGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: DGEVDQGVVEPGDHALHFGWRGW*AGFGLW
Trigger: CCAGAGCCCGAAACCGGCTCACCACCCCCGCCACCC...AAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR TCA 90 bp CTGCAGGGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCAGCTCTGTGGTGGGTATaGGTAGGGGACGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: LQGDGEVDQGVVEPGDHAALWWV*VGDGAA
Trigger: GGCGGCCCCGTCCCCTACTCATACCCACCACAGAGC...TGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTGCGTGCACCTCGTCGTaGAGCAGCCAGCGGAACTCC +
Preference number: 4 (lower is better)
Translates to: VVGMSRGRGRLPGDKLLGACTSS*SSQRNS
Trigger: GGAGTTCCGCTGGCTGCTGCACGACGAGGTGCACGC...ACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp CAGGGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCATGGCCCCAGGGCTATaGAGCACCGCGCCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: QGDGEVDQGVVEPGDHALMAPGL*STAPPA
Trigger: AGCTGGGGGCGCGGTGCTGCATAGCCCTGGGGCCAT...GAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp TGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCATGGCCCCAGGGCTATaGAGCACCGCGCCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: CSVVGMSRGRGRLPGDKLMAPGL*STAPPA
Trigger: AGCTGGGGGCGCGGTGCTGCATAGCCCTGGGGCCAT...GAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCACAGAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GTTGACCAGCAGGTCGGACGGCAGGGCAGGGGCGAACATCCGCGTGAGGCCGCTCAGCTGCAGCATCACTaGGTCCATCAGCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: VDQQVGRQGRGEHPREAAQLQHH*VHQLQG
Trigger: TCCCTGCAGCTGATGGACGCAGTGATGCTGCAGCTG...AGCGGCCTCACGCGGATGTTCGCCCCTGCCCTGCCGTCCGACCTGCTGGTCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588201.5
CDS-3UTR CCA 90 bp GGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGCCATCACGGTGGCCATaGCCGCAGGCCGCCGCCGAG +
Preference number: 4 (lower is better)
Translates to: GEVDQGVVEPGDHALHFVPSRWP*PQAAAE
Trigger: CTCGGCGGCGGCCTGCGGCCATGGCCACCGTGATGG...CACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GTTGACCAGCAGGTCGGACGGCAGGGCAGGGGCGAACATCCGCGTGAGGCCGCTGGCGGAAGTTCTTGGTaGAGTTGGGCTGCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: VDQQVGRQGRGEHPREAAGGSSW*SWAAGH
Trigger: ATGCCCTGCAGCCCAACTCCACCAAGAACTTCCGCC...AGCGGCCTCACGCGGATGTTCGCCCCTGCCCTGCCGTCCGACCTGCTGGTCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTCACCGCGCCCCCAGCTaGGCGGAAGTTCTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: VVGMSRGRGRLPGDKLLGHRAPS*AEVLGG
Trigger: TCCACCAAGAACTTCCGCCCAGCTGGGGGCGCGGTG...ACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR TCA 90 bp GGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTGCTGTGCCTCAGCGCCCGTCTTaGACTGGTAGCTCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: GMSRGRGRLPGDKLLGAVPQRPS*TGSSGP
Trigger: GGGACCAGAGCTACCAGTTCAAGACGGGCGCTGAGG...CACAGCACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587843.5
ENST00000588201.5
CDS-3UTR TCA 90 bp CGCACTCCACTTTGTGCACGTGGCTCACCTCCAGGCGCTGAGAGCCCCACTCGACCTCAGCGCCCGTCTTaGACTGGTAGCTCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: RTPLCARGSPPGAESPTRPQRPS*TGSSGP
Trigger: GGGACCAGAGCTACCAGTTCAAGACGGGCGCTGAGG...TCGAGTGGGGCTCTCAGCGCCTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
CDS-3UTR TCA 90 bp CAGCCTGGCGTTGGCACTGGCTGGTGCTCTGTGGTGGGTATGAGTAGGGGACGGCTGCGTCCATCAGCTTaGGGACCTCAGCGCCCGTCT +
Preference number: 4 (lower is better)
Translates to: QPGVGTGWCSVVGMSRGRLRPSA*GPQRPS
Trigger: AGACGGGCGCTGAGGTCCTCAAGCTGATGGACGCAG...CCGTCCCCTACTCATACCCACCACAGAGCACCAGCCAGTGCCAACGCCAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322048.12
ENST00000587843.5
CDS-3UTR TCA 90 bp GTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTGCTAGACCAGGGCGTCGTTaGGCCAGGGGATCACGCACT +
Preference number: 4 (lower is better)
Translates to: VGMSRGRGRLPGDKLLGARPGRR*ARGSRT
Trigger: AGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCT...AGCACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
CDS-3UTR TCA 90 bp CCTGGCGTTGGCACTGGCTGGTGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCCGCCTGGCCCTGTCCTaGGTCCAAAGATTCCCATGG +
Preference number: 4 (lower is better)
Translates to: PGVGTGWCSVVGMSRGRGRLALS*VQRFPW
Trigger: CCATGGGAATCTTTGGACTCAGGACAGGGCCAGGCG...GCCCCGTCCCCTACTCATACCCACCACAGAGCACCAGCCAGTGCCAACGCCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR GCA 90 bp AGGTGGGGTAGGGGGTGGGATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGCTCCGCCGCCGTCGCTaGCATCACGGTGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: RWGRGWDREINSSLALALLRRRR*HHGGHG
Trigger: GCCATGGCCACCGTGATGGCAGCGACGGCGGCGGAG...CAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATCCCACCCCCTACCCCACCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GCAGAGCTGCAGGGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATAGGCGGGGTTGGCTCTaGGTCCTCCCGTGTCCCCAT +
Preference number: 4 (lower is better)
Translates to: AELQGDGEVDQGVVEPGDRRGWL*VLPCPH
Trigger: ATGGGGACACGGGAGGACGCAGAGCCAACCCCGCCT...ATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAGCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588201.5
CDS-3UTR CCA 90 bp CGCACTCCACTTTGTGCACGTGGCTCACCTCCAGGCGCTGAGAGCCCCACTCGAAGGTTCACATCCGCCTaGCTGAGGGCATCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: RTPLCARGSPPGAESPTRRFTSA*LRASPC
Trigger: GCAGGGGGATGCCCTCAGCCAGGCGGATGTGAACCT...TCGAGTGGGGCTCTCAGCGCCTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587377.5
CDS-3UTR CCA 90 bp GGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACCACCGCGCCCCCAGCTaGGCGGAAGTTCTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: GDGEVDQGVVEPGDHALHHRAPS*AEVLGG
Trigger: TCCACCAAGAACTTCCGCCCAGCTGGGGGCGCGGTG...GTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GCAGAGCTGCAGGGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATGCGGTGTTGGGAATGTaGGACACCCTTGGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: AELQGDGEVDQGVVEPGDAVLGM*DTLGPA
Trigger: GGCGGGGCCAAGGGTGTCCCACATTCCCAACACCGC...ATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAGCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587377.5
ENST00000587843.5
CDS-3UTR CCA 90 bp CAGCCTGGCGTTGGCACTGGCTGGTGCTCTGTGGTGGGTATGAGTAGGGGACGGGGGTGGCTCTGTCTGTaGCGTTCCTCACCATCCCCG +
Preference number: 4 (lower is better)
Translates to: QPGVGTGWCSVVGMSRGRGWLCL*RSSPSP
Trigger: CGGGGATGGTGAGGAACGCCACAGACAGAGCCACCC...CCGTCCCCTACTCATACCCACCACAGAGCACCAGCCAGTGCCAACGCCAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR CCA 90 bp GTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTGCTGGGTGGCTCTGTCTGTaGCGTTCCTCACCATCCCCG +
Preference number: 4 (lower is better)
Translates to: VGMSRGRGRLPGDKLLGAGWLCL*RSSPSP
Trigger: CGGGGATGGTGAGGAACGCCACAGACAGAGCCACCC...AGCACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR CCA 90 bp GAGCTGCAGGGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACAGGGAGAGGCGGGGTTaGCTCTGCGTCCTCCCGTGT +
Preference number: 4 (lower is better)
Translates to: ELQGDGEVDQGVVEPGDHRERRG*LCVLPC
Trigger: ACACGGGAGGACGCAGAGCCAACCCCGCCTCTCCCT...GTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588201.5
CDS-3UTR TCA 90 bp AGGGGGTGGGATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGGCTGGTGCTCGGAGCCCGGCAGAGTaGAGCGCAGAGAGGCCTCCT +
Preference number: 4 (lower is better)
Translates to: RGWDREINSSLALALAGARSPAE*SAERPP
Trigger: AGGAGGCCTCTCTGCGCTTCACTCTGCCGGGCTCCG...AGCACCAGCCAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATCCCACCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR TCA 90 bp GCAGAGCTGCAGGGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCCTCAGCGCCCGTCTTaGACTGGTAGCTCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: AELQGDGEVDQGVVEPGDPQRPS*TGSSGP
Trigger: GGGACCAGAGCTACCAGTTCAAGACGGGCGCTGAGG...ATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAGCTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586153.1
ENST00000587843.5
ENST00000588201.5
CDS-3UTR TCA 90 bp AAAGATTCCCATGGTGATCAGAGGGCGGTGTTGGGAATGTGGGACACCCTTGGCGGGTGGCGGGGGTGGTaGGCCGGTTTCGGGCTCTGG +
Preference number: 4 (lower is better)
Translates to: KDSHGDQRAVLGMWDTLGGWRGW*AGFGLW
Trigger: CCAGAGCCCGAAACCGGCTCACCACCCCCGCCACCC...GCCAAGGGTGTCCCACATTCCCAACACCGCCCTCTGATCACCATGGGAATCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR TCA 90 bp GTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACGTGGCTCACCTCCAGGCGAGACCAGGGCGTCGTTaGGCCAGGGGATCACGCACT +
Preference number: 4 (lower is better)
Translates to: VEPGDHALHFVHVAHLQARPGRR*ARGSRT
Trigger: AGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCT...CGCCTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR TCA 90 bp GGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACGCTGCAGGGAGACGGTaGAGTAGACCAGGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: GDGEVDQGVVEPGDHALHAAGRR*SRPGRR
Trigger: ACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAGC...GTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR TCA 90 bp CTGCAGGGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCAGCTGCAGGGAGACGGTaGAGTAGACCAGGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: LQGDGEVDQGVVEPGDHAAAGRR*SRPGRR
Trigger: ACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAGC...TGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR TCA 90 bp GAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACGCTCTGTGGTGGGTATaGGTAGGGGACGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: EVDQGVVEPGDHALHFVHALWWV*VGDGAA
Trigger: GGCGGCCCCGTCCCCTACTCATACCCACCACAGAGC...GTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR TCA 90 bp AGGTGGGGTAGGGGGTGGGATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGGCTCTGTGGTGGGTATaGGTAGGGGACGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: RWGRGWDREINSSLALALALWWV*VGDGAA
Trigger: GGCGGCCCCGTCCCCTACTCATACCCACCACAGAGC...CAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATCCCACCCCCTACCCCACCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
CDS-3UTR TCA 90 bp GTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTCGCCTGGCCCTGTCCTaGGTCCAAAGATTCCCATGG +
Preference number: 4 (lower is better)
Translates to: VVGMSRGRGRLPGDKLLGRLALS*VQRFPW
Trigger: CCATGGGAATCTTTGGACTCAGGACAGGGCCAGGCG...ACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR TCA 90 bp GGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACGCTCAGCGCCCGTCTTaGACTGGTAGCTCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: GDGEVDQGVVEPGDHALHAQRPS*TGSSGP
Trigger: GGGACCAGAGCTACCAGTTCAAGACGGGCGCTGAGC...GTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587377.5
CDS-3UTR GCA 90 bp GTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTCTCCCCACCGGCCGCTaGTCCTGTCCACCAATCTTT +
Preference number: 4 (lower is better)
Translates to: VVGMSRGRGRLPGDKLLGLPTGR*SCPPIF
Trigger: AAAGATTGGTGGACAGGAGCAGCGGCCGGTGGGGAG...ACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp CCTGGCGTTGGCACTGGCTGGTGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCTGCTTCAACACAGCGTaGACCTCGTCGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PGVGTGWCSVVGMSRGRGCFNTA*TSSCSS
Trigger: GCTGCTGCACGACGAGGTGCACGCTGTGTTGAAGCA...GCCCCGTCCCCTACTCATACCCACCACAGAGCACCAGCCAGTGCCAACGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp ACATGGCCCCAGGGCTATGCAGCACCGCGCCCCCAGCTGGGCGGAAGTTCTTGGAGGATGTCCTGCAGCTaGTTCAACACAGCGTGCACC +
Preference number: 4 (lower is better)
Translates to: TWPQGYAAPRPQLGGSSWRMSCS*FNTACT
Trigger: GGTGCACGCTGTGTTGAAGCAGCTGCAGGACATCCT...CCAAGAACTTCCGCCCAGCTGGGGGCGCGGTGCTGCATAGCCCTGGGGCCATGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp AGGGTGAGGGTGGCGGGGGTGGTGAGCCGGTTTCGGGCTCTGGTCAGCTGCAGCTCCTTGAGGATGTCCTaGAGCTGCTTCAACACAGCG +
Preference number: 4 (lower is better)
Translates to: RVRVAGVVSRFRALVSCSSLRMS*SCFNTA
Trigger: CGCTGTGTTGAAGCAGCTGCAGGACATCCTCAAGGA...GCTGCAGCTGACCAGAGCCCGAAACCGGCTCACCACCCCCGCCACCCTCACCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTGCTTCCCGGAAGGCGAAGTaGAGCAGCTGGTTGTTCCGG +
Preference number: 4 (lower is better)
Translates to: VGMSRGRGRLPGDKLLGASRKAK*SSWLFR
Trigger: CCGGAACAACCAGCTGCTGCACTTCGCCTTCCGGGA...AGCACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTTGCTGCAGCTTCCACTaGTTGTCCTCCCGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: VVGMSRGRGRLPGDKLLGCCSFH*LSSRKA
Trigger: CGCCTTCCGGGAGGACAAGCAGTGGAAGCTGCAGCA...ACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
CDS-3UTR GCA 90 bp GTGCACGTGGCTCACCTCCAGGCGCTGAGAGCCCCACTCGAACATGGCCCCAGGGCATCCTGGATCTGCTaGAGCTTCCACTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: VHVAHLQALRAPLEHGPRASWIC*SFHCLS
Trigger: GGACAAGCAGTGGAAGCTGCAGCAGATCCAGGATGC...CCTGGGGCCATGTTCGAGTGGGGCTCTCAGCGCCTGGAGGTGAGCCACGTGCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTGCTTTGGGCTGCAGGGCATaGAGCTGGTACACCGTGAGG +
Preference number: 4 (lower is better)
Translates to: VGMSRGRGRLPGDKLLGALGCRA*SWYTVR
Trigger: CCTCACGGTGTACCAGCTGCATGCCCTGCAGCCCAA...AGCACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp CCTGGCGTTGGCACTGGCTGGTGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCTTGGTGGAGTTGGGCTaGAGGGCATGCAGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: PGVGTGWCSVVGMSRGRGLVELG*RACSWY
Trigger: GTACCAGCTGCATGCCCTGCAGCCCAACTCCACCAA...GCCCCGTCCCCTACTCATACCCACCACAGAGCACCAGCCAGTGCCAACGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GGCACTTCCAGTGTCCATTCCCGGCAGTGCAAATGTGTTAGGTGGGGTAGGGGGATGGCCCCAGGGCTATaGAGCACCGCGCCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: GTSSVHSRQCKCVRWGRGMAPGL*STAPPA
Trigger: AGCTGGGGGCGCGGTGCTGCATAGCCCTGGGGCCAT...CCCCCTACCCCACCTAACACATTTGCACTGCCGGGAATGGACACTGGAAGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp CACTCGAACATGGCCCCAGGGCTATGCAGCACCGCGCCCCCAGCTGGGCGGAAGAGACAAGCTCCTGGGTaGTGTGATCAGAAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: HSNMAPGLCSTAPPAGRKRQAPG*CDQKGL
Trigger: CAGACCCTTCTGATCACAGCACCCAGGAGCTTGTCT...CTTCCGCCCAGCTGGGGGCGCGGTGCTGCATAGCCCTGGGGCCATGTTCGAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACGTGGCTCACCTCCAGGCGACTGCGTCCATCAGCTaGAGGGAGAGGCGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: VEPGDHALHFVHVAHLQATASIS*RERRGW
Trigger: CCAACCCCGCCTCTCCCTGCAGCTGATGGACGCAGT...CGCCTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587377.5
ENST00000588201.5
CDS-3UTR CCA 90 bp TGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCAGGTTCACATCCGCCTaGCTGAGGGCATCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: CSVVGMSRGRGRLPGDKLRFTSA*LRASPC
Trigger: GCAGGGGGATGCCCTCAGCCAGGCGGATGTGAACCT...GAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCACAGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322048.12
ENST00000587377.5
CDS-3UTR CCA 90 bp GTTGACCAGCAGGTCGGACGGCAGGGCAGGGGCGAACATCCGCGTGAGGCCGCTTGGTTTCTGGCATCCTaGATCTGCTGCAGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: VDQQVGRQGRGEHPREAAWFLAS*ICCSFH
Trigger: GTGGAAGCTGCAGCAGATCCAGGATGCCAGAAACCA...AGCGGCCTCACGCGGATGTTCGCCCCTGCCCTGCCGTCCGACCTGCTGGTCAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp CAGCCTGGCGTTGGCACTGGCTGGTGCTCTGTGGTGGGTATGAGTAGGGGACGGGCCGGTTTCGGGCTCTaGTCAGCTGCAGCATCACTG +
Preference number: 4 (lower is better)
Translates to: QPGVGTGWCSVVGMSRGRAGFGL*SAAASL
Trigger: CAGTGATGCTGCAGCTGACCAGAGCCCGAAACCGGC...CCGTCCCCTACTCATACCCACCACAGAGCACCAGCCAGTGCCAACGCCAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp CTGGTCAGCTGCAGCATCACTGCGTCCATCAGCTGCAGGGAGAGGCGGGGTTGGGCCGGTTTCGGGCTCTaGTCAGCTGCAGCATCACTG +
Preference number: 4 (lower is better)
Translates to: LVSCSITASISCRERRGWAGFGL*SAAASL
Trigger: CAGTGATGCTGCAGCTGACCAGAGCCCGAAACCGGC...CCAACCCCGCCTCTCCCTGCAGCTGATGGACGCAGTGATGCTGCAGCTGACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588201.5
CDS-3UTR CCA 90 bp CCTGGCGTTGGCACTGGCTGGTGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCGGCGGAAGTTCTTGGTaGAGTTGGGCTGCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: PGVGTGWCSVVGMSRGRGGGSSW*SWAAGH
Trigger: ATGCCCTGCAGCCCAACTCCACCAAGAACTTCCGCC...GCCCCGTCCCCTACTCATACCCACCACAGAGCACCAGCCAGTGCCAACGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp CAGCCTGGCGTTGGCACTGGCTGGTGCTCTGTGGTGGGTATGAGTAGGGGACGGCTGGGCGGAAGTTCTTaGTGGAGTTGGGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: QPGVGTGWCSVVGMSRGRLGGSS*WSWAAG
Trigger: CCCTGCAGCCCAACTCCACCAAGAACTTCCGCCCAG...CCGTCCCCTACTCATACCCACCACAGAGCACCAGCCAGTGCCAACGCCAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACGTGGCTCACCTCCAGCACCGCGCCCCCAGCTaGGCGGAAGTTCTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: VVEPGDHALHFVHVAHLQHRAPS*AEVLGG
Trigger: TCCACCAAGAACTTCCGCCCAGCTGGGGGCGCGGTG...CTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTAGCCCCACTCGAACATaGCCCCAGGGCTATGCAGCA +
Preference number: 4 (lower is better)
Translates to: VVGMSRGRGRLPGDKLLGSPTRT*PQGYAA
Trigger: TGCTGCATAGCCCTGGGGCCATGTTCGAGTGGGGCT...ACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GGATCACGCACTCCACTTTGTGCACGTGGCTCACCTCCAGGCGCTGAGAGCCCCAGCCCCACTCGAACATaGCCCCAGGGCTATGCAGCA +
Preference number: 4 (lower is better)
Translates to: GSRTPLCARGSPPGAESPSPTRT*PQGYAA
Trigger: TGCTGCATAGCCCTGGGGCCATGTTCGAGTGGGGCT...GGGGCTCTCAGCGCCTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GTGGCTCTGTCTGTGGCGTTCCTCACCATCCCCGGGACTCATAGCTCAGTGCCAGCCTGGCGTTGGCACTaGCTGGTGCTCTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: VALSVAFLTIPGTHSSVPAWRWH*LVLCGG
Trigger: CCCACCACAGAGCACCAGCCAGTGCCAACGCCAGGC...TGGCACTGAGCTATGAGTCCCGGGGATGGTGAGGAACGCCACAGACAGAGCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR CCA 90 bp CAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACGTGGCTCACAATGTGGGACACCCTTaGCCCCGCCTCCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: QGVVEPGDHALHFVHVAHNVGHP*PRLPDL
Trigger: GAGGTCAGGGAGGCGGGGCCAAGGGTGTCCCACATT...GTGAGCCACGTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587377.5
ENST00000587843.5
CDS-3UTR CCA 90 bp GGCACTTCCAGTGTCCATTCCCGGCAGTGCAAATGTGTTAGGTGGGGTAGGGGGTCCCCATTGGCAGGATaGGAGGGGACAGGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: GTSSVHSRQCKCVRWGRGSPLAG*EGTGPG
Trigger: CCCCGGCCCTGTCCCCTCCCATCCTGCCAATGGGGA...CCCCCTACCCCACCTAACACATTTGCACTGCCGGGAATGGACACTGGAAGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000588201.5
CDS-3UTR TCA 90 bp GTGGCTACTGTTCCCAGGTCCCGAAACCCGGCAGCAGGGACCTTGAGGACCTCAGCAGAGAGGCCTCCTTaGGGATGTCCTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: VATVPRSRNPAAGTLRTSAERPP*GCPAAA
Trigger: AGCAGCTGCAGGACATCCTCAAGGAGGCCTCTCTGC...TGAGGTCCTCAAGGTCCCTGCTGCCGGGTTTCGGGACCTGGGAACAGTAGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588201.5
CDS-3UTR TCA 90 bp GTGAGCCGGTTTCGGGCTCTGGTCAGCTGCAGCATCACTGCGTCCATCAGCTTGCTGCGTCCATCAGCTTaGGGACCTCAGCGCCCGTCT +
Preference number: 4 (lower is better)
Translates to: VSRFRALVSCSITASISLLRPSA*GPQRPS
Trigger: AGACGGGCGCTGAGGTCCTCAAGCTGATGGACGCAG...CAAGCTGATGGACGCAGTGATGCTGCAGCTGACCAGAGCCCGAAACCGGCTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587843.5
CDS-3UTR TCA 90 bp CGGAAGTTCTTGGTGGAGTTGGGCTGCAGGGCATGCAGCTGGTACACCGTGAGGGCTGCAGGGAGACGGTaGAGTAGACCAGGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: RKFLVELGCRACSWYTVRAAGRR*SRPGRR
Trigger: ACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAGC...CCTCACGGTGTACCAGCTGCATGCCCTGCAGCCCAACTCCACCAAGAACTTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
CDS-3UTR TCA 90 bp GATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGGCTGGTGCTCTGTGGTGGGCTCTGTGGTGGGTATaGGTAGGGGACGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: DREINSSLALALAGALWWALWWV*VGDGAA
Trigger: GGCGGCCCCGTCCCCTACTCATACCCACCACAGAGC...CCACCACAGAGCACCAGCCAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
CDS-3UTR TCA 90 bp AACATGGCCCCAGGGCTATGCAGCACCGCGCCCCCAGCTGGGCGGAAGTTCTTGCAAAGATTCCCATGGTaGTCAGAGGGCGGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: NMAPGLCSTAPPAGRKFLQRFPW*SEGGVG
Trigger: CCCAACACCGCCCTCTGATCACCATGGGAATCTTTG...CAAGAACTTCCGCCCAGCTGGGGGCGCGGTGCTGCATAGCCCTGGGGCCATGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587843.5
CDS-3UTR TCA 90 bp GACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTCTCACCTCCAGGCGCTaGGAGCCCCAAACATGGCCC +
Preference number: 4 (lower is better)
Translates to: DGEVDQGVVEPGDHALHFLTSRR*EPQTWP
Trigger: GGGCCATGTTTGGGGCTCTCAGCGCCTGGAGGTGAG...AAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586153.1
CDS-3UTR GCA 90 bp CTGCAGGGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCCCACCGGCCGCTaGTCCTGTCCACCAATCTTT +
Preference number: 4 (lower is better)
Translates to: LQGDGEVDQGVVEPGDHALPTGR*SCPPIF
Trigger: AAAGATTGGTGGACAGGAGCAGCGGCCGGTGGGGAG...TGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp TGGTGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCCCACCGGCCGCTaGTCCTGTCCACCAATCTTT +
Preference number: 4 (lower is better)
Translates to: WCSVVGMSRGRGRLPGDKLPTGR*SCPPIF
Trigger: AAAGATTGGTGGACAGGAGCAGCGGCCGGTGGGGAG...CTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCACAGAGCACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp AAAGATTCCCATGGTGATCAGAGGGCGGTGTTGGGAATGTGGGACACCCTTGGCCTCCGCCGCCGTCGCTaGCATCACGGTGGCCATGGC +
Preference number: 4 (lower is better)
Translates to: KDSHGDQRAVLGMWDTLGLRRRR*HHGGHG
Trigger: GCCATGGCCACCGTGATGGCAGCGACGGCGGCGGAG...GCCAAGGGTGTCCCACATTCCCAACACCGCCCTCTGATCACCATGGGAATCTTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR GCA 90 bp GAGCTGCAGGGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACCTGAGGGCATCCCCCTaGAGAGTCAGCACACCCTTC +
Preference number: 4 (lower is better)
Translates to: ELQGDGEVDQGVVEPGDHLRASP*RVSTPF
Trigger: GAAGGGTGTGCTGACTCTGCAGGGGGATGCCCTCAG...GTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587377.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTGCTGCAGCTTCCACTaGTTGTCCTCCCGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: GDGEVDQGVVEPGDHALHCCSFH*LSSRKA
Trigger: CGCCTTCCGGGAGGACAAGCAGTGGAAGCTGCAGCA...GTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GGATCACGCACTCCACTTTGTGCACGTGGCTCACCTCCAGGCGCTGAGAGCCCCCAGCTGCAGCATCACTaGGTCCATCAGCTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GSRTPLCARGSPPGAESPQLQHH*VHQLQG
Trigger: TCCCTGCAGCTGATGGACGCAGTGATGCTGCAGCTG...GGGGCTCTCAGCGCCTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587377.5
ENST00000588201.5
CDS-3UTR GCA 90 bp CAGGCGCTGAGAGCCCCACTCGAACATGGCCCCAGGGCTATGCAGCACCGCGCCCCTCCCGTGTCCCCATaGATTAAGGAACAACAGACA +
Preference number: 4 (lower is better)
Translates to: QALRAPLEHGPRAMQHRAPPVSP*IKEQQT
Trigger: TGTCTGTTGTTCCTTAATGCATGGGGACACGGGAGG...GGCGCGGTGCTGCATAGCCCTGGGGCCATGTTCGAGTGGGGCTCTCAGCGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000588201.5
CDS-3UTR CCA 90 bp GTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTGCTGCGAAGTGCAGCAGCTaGTTGTTCCGGGGCATCTTC +
Preference number: 4 (lower is better)
Translates to: VGMSRGRGRLPGDKLLGAAKCSS*LFRGIF
Trigger: GAAGATGCCCCGGAACAACCAGCTGCTGCACTTCGC...AGCACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GAGCTGCAGGGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCCGGTTTCGGGCTCTaGTCAGCTGCAGCATCACTG +
Preference number: 4 (lower is better)
Translates to: ELQGDGEVDQGVVEPGDHAGFGL*SAAASL
Trigger: CAGTGATGCTGCAGCTGACCAGAGCCCGAAACCGGC...GTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp TGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCTGCAGGGCATGCAGCTaGTACACCGTGAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: CSVVGMSRGRGRLPGDKLCRACS*YTVRQS
Trigger: GCTCTGCCTCACGGTGTACCAGCTGCATGCCCTGCA...GAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCACAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACGTGGCTCACCTCTGCAGGGCATGCAGCTaGTACACCGTGAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: GVVEPGDHALHFVHVAHLCRACS*YTVRQS
Trigger: GCTCTGCCTCACGGTGTACCAGCTGCATGCCCTGCA...GAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GAGCTGCAGGGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACCTGGGCGGAAGTTCTTaGTGGAGTTGGGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: ELQGDGEVDQGVVEPGDHLGGSS*WSWAAG
Trigger: CCCTGCAGCCCAACTCCACCAAGAACTTCCGCCCAG...GTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GTTGATGTAGACGTTGACCAGCAGGTCGGACGGCAGGGCAGGGGCGAACATCCGCTGGGCGGAAGTTCTTaGTGGAGTTGGGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: VDVDVDQQVGRQGRGEHPLGGSS*WSWAAG
Trigger: CCCTGCAGCCCAACTCCACCAAGAACTTCCGCCCAG...CGGATGTTCGCCCCTGCCCTGCCGTCCGACCTGCTGGTCAACGTCTACATCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp CGCACTCCACTTTGTGCACGTGGCTCACCTCCAGGCGCTGAGAGCCCCACTCGAATAGCAGCCTGGCGTTaGCACTGGCTGGTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: RTPLCARGSPPGAESPTRIAAWR*HWLVLC
Trigger: ACAGAGCACCAGCCAGTGCCAACGCCAGGCTGCTAT...TCGAGTGGGGCTCTCAGCGCCTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACGTGGGGTGGCTCTGTCTGTaGCGTTCCTCACCATCCCCG +
Preference number: 4 (lower is better)
Translates to: VDQGVVEPGDHALHFVHVGWLCL*RSSPSP
Trigger: CGGGGATGGTGAGGAACGCCACAGACAGAGCCACCC...CACGTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000587377.5
ENST00000587843.5
3UTR CAA 72 bp CATCACTGCGTCCATCAGCTGCAGGGAGAGGCGGGGTaGGCTCTGCGTCCTCCCGTGTCCCCATGCATTAAG +
Preference number: 4 (lower is better)
Translates to: HHCVHQLQGEAG*ALRPPVSPCIK
Trigger: CTTAATGCATGGGGACACGGGAGGACGCAGAGCCAACCCCGCCTCTCCCTGCAGCTGATGGACGCAGTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588201.5
CDS-3UTR TCA 90 bp GATTCCCATGGTGATCAGAGGGCGGTGTTGGGAATGTGGGACACCCTTGGCCCCGCAGAGAGGCCTCCTTaGGGATGTCCTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: DSHGDQRAVLGMWDTLGPAERPP*GCPAAA
Trigger: AGCAGCTGCAGGACATCCTCAAGGAGGCCTCTCTGC...GGGGCCAAGGGTGTCCCACATTCCCAACACCGCCCTCTGATCACCATGGGAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR TCA 90 bp GAGCCAGGGGATCACGCACTCCACTTTGTGCACGTGGCTCACCTCCAGGCGCTGCACAGCTGCCTAGGATaGAGTTCTCTTGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: EPGDHALHFVHVAHLQALHSCLG*SSLAWR
Trigger: CCGCCAAGCAAGAGAACTTCATCCTAGGCAGCTGTG...CAGCGCCTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGATCCCCTGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR TCA 90 bp GACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTAGACCAGGGCGTCGTTaGGCCAGGGGATCACGCACT +
Preference number: 4 (lower is better)
Translates to: DGEVDQGVVEPGDHALHFRPGRR*ARGSRT
Trigger: AGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCT...AAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR TCA 90 bp AGGTGGGGTAGGGGGTGGGATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGAGACCAGGGCGTCGTTaGGCCAGGGGATCACGCACT +
Preference number: 4 (lower is better)
Translates to: RWGRGWDREINSSLALALRPGRR*ARGSRT
Trigger: AGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCT...CAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATCCCACCCCCTACCCCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
CDS-3UTR TCA 90 bp TGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCGGAGATCTTGTCCTTaGGCTGCTGGCAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: CSVVGMSRGRGRLPGDKLRRSCP*AAGRAA
Trigger: TGCAGCTCTGCCAGCAGCTCAAGGACAAGATCTCCG...GAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCACAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
CDS-3UTR TCA 90 bp GGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACCGGAGATCTTGTCCTTaGGCTGCTGGCAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GDGEVDQGVVEPGDHALHRRSCP*AAGRAA
Trigger: TGCAGCTCTGCCAGCAGCTCAAGGACAAGATCTCCG...GTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR TCA 90 bp GTGGCTACTGTTCCCAGGTCCCGAAACCCGGCAGCAGGGACCTTGAGGACCTCACGGAGATCTTGTCCTTaGGCTGCTGGCAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: VATVPRSRNPAAGTLRTSRRSCP*AAGRAA
Trigger: TGCAGCTCTGCCAGCAGCTCAAGGACAAGATCTCCG...TGAGGTCCTCAAGGTCCCTGCTGCCGGGTTTCGGGACCTGGGAACAGTAGCCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588201.5
CDS-3UTR TCA 90 bp CAGCCTGGCGTTGGCACTGGCTGGTGCTCTGTGGTGGGTATGAGTAGGGGACGGCAAAGATTCCCATGGTaGTCAGAGGGCGGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: QPGVGTGWCSVVGMSRGRQRFPW*SEGGVG
Trigger: CCCAACACCGCCCTCTGATCACCATGGGAATCTTTG...CCGTCCCCTACTCATACCCACCACAGAGCACCAGCCAGTGCCAACGCCAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR TCA 90 bp CGTCTTGAACTGGTAGCTCTGGTCCCGGCTGGTAAGCAGGTAAATGGCTTGGCTCGGCAGCAGGGACCTTaGGGACCTCAGCGCCCGTCT +
Preference number: 4 (lower is better)
Translates to: RLELVALVPAGKQVNGLARQQGP*GPQRPS
Trigger: AGACGGGCGCTGAGGTCCTCAAGGTCCCTGCTGCCG...AGCCAAGCCATTTACCTGCTTACCAGCCGGGACCAGAGCTACCAGTTCAAGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588201.5
CDS-3UTR GCA 90 bp TGGGATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGGCTGGTGCTCTGTGGGCGTGCACCTCGTCGTaGAGCAGCCAGCGGAACTCC +
Preference number: 4 (lower is better)
Translates to: WDREINSSLALALAGALWACTSS*SSQRNS
Trigger: GGAGTTCCGCTGGCTGCTGCACGACGAGGTGCACGC...CCACAGAGCACCAGCCAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GTTGATGTAGACGTTGACCAGCAGGTCGGACGGCAGGGCAGGGGCGAACATCCGTGCTTCAACACAGCGTaGACCTCGTCGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VDVDVDQQVGRQGRGEHPCFNTA*TSSCSS
Trigger: GCTGCTGCACGACGAGGTGCACGCTGTGTTGAAGCA...CGGATGTTCGCCCCTGCCCTGCCGTCCGACCTGCTGGTCAACGTCTACATCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp CAGCCTGGCGTTGGCACTGGCTGGTGCTCTGTGGTGGGTATGAGTAGGGGACGGAGGATGAAGTTCTCTTaGTTGGCGGGCCCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: QPGVGTGWCSVVGMSRGRRMKFS*LAGPSV
Trigger: CACTGAGGGGCCCGCCAAGCAAGAGAACTTCATCCT...CCGTCCCCTACTCATACCCACCACAGAGCACCAGCCAGTGCCAACGCCAGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACGTGGCTCACCTCCAGTCCCGGAAGGCGAAGTaGAGCAGCTGGTTGTTCCGG +
Preference number: 4 (lower is better)
Translates to: VVEPGDHALHFVHVAHLQSRKAK*SSWLFR
Trigger: CCGGAACAACCAGCTGCTGCACTTCGCCTTCCGGGA...CTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTGCTGCATCCTGGATCTGCTaGAGCTTCCACTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: VGMSRGRGRLPGDKLLGAASWIC*SFHCLS
Trigger: GGACAAGCAGTGGAAGCTGCAGCAGATCCAGGATGC...AGCACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
CDS-3UTR GCA 90 bp CTGCAGGGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCAACGCACTCCACTTTGTaGACGTGGCTCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LQGDGEVDQGVVEPGDHATHSTL*TWLTSR
Trigger: CCTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCGT...TGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACACGCACTCCACTTTGTaGACGTGGCTCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GDGEVDQGVVEPGDHALHTHSTL*TWLTSR
Trigger: CCTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCGT...GTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp TGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCACGCACTCCACTTTGTaGACGTGGCTCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: CSVVGMSRGRGRLPGDKLTHSTL*TWLTSR
Trigger: CCTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCGT...GAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCACAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTGCTGTGATCTTGTCCTTGAGCTaGTGGCAGAGCTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GMSRGRGRLPGDKLLGAVILSLS*WQSCRE
Trigger: CTCCCTGCAGCTCTGCCAGCAGCTCAAGGACAAGAT...CACAGCACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
CDS-3UTR GCA 90 bp GTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTGTTGGCACTGGCTGGTaGTCTGTGGTGGGTATGAGT +
Preference number: 4 (lower is better)
Translates to: VVGMSRGRGRLPGDKLLGVGTGW*SVVGMS
Trigger: ACTCATACCCACCACAGAGCACCAGCCAGTGCCAAC...ACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
CDS-3UTR GCA 90 bp GGATCACGCACTCCACTTTGTGCACGTGGCTCACCTCCAGGCGCTGAGAGCCCCGTTGGCACTGGCTGGTaGTCTGTGGTGGGTATGAGT +
Preference number: 4 (lower is better)
Translates to: GSRTPLCARGSPPGAESPVGTGW*SVVGMS
Trigger: ACTCATACCCACCACAGAGCACCAGCCAGTGCCAAC...GGGGCTCTCAGCGCCTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp CTTAGACAGCCCTGGACTGGGGCTATGAAACACAGTCACCAGCACTATACTCACCCATCACGGTGGCCATaGCCGCAGGCCGCCGCCGAG +
Preference number: 4 (lower is better)
Translates to: LRQPWTGAMKHSHQHYTHPSRWP*PQAAAE
Trigger: CTCGGCGGCGGCCTGCGGCCATGGCCACCGTGATGG...GTGAGTATAGTGCTGGTGACTGTGTTTCATAGCCCCAGTCCAGGGCTGTCTAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR CCA 90 bp TGGTGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGGCGAAGTGCAGCAGCTaGTTGTTCCGGGGCATCTTC +
Preference number: 4 (lower is better)
Translates to: WCSVVGMSRGRGRLPGDKAKCSS*LFRGIF
Trigger: GAAGATGCCCCGGAACAACCAGCTGCTGCACTTCGC...CTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCACAGAGCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp CTGCAGGGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCAGCGAAGTGCAGCAGCTaGTTGTTCCGGGGCATCTTC +
Preference number: 4 (lower is better)
Translates to: LQGDGEVDQGVVEPGDHAAKCSS*LFRGIF
Trigger: GAAGATGCCCCGGAACAACCAGCTGCTGCACTTCGC...TGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp CCTGGCGTTGGCACTGGCTGGTGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCTGGTTTCTGGCATCCTaGATCTGCTGCAGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: PGVGTGWCSVVGMSRGRGWFLAS*ICCSFH
Trigger: GTGGAAGCTGCAGCAGATCCAGGATGCCAGAAACCA...GCCCCGTCCCCTACTCATACCCACCACAGAGCACCAGCCAGTGCCAACGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
CDS-3UTR CCA 90 bp CGGAAGTTCTTGGTGGAGTTGGGCTGCAGGGCATGCAGCTGGTACACCGTGAGGTGCAGGGCATGCAGCTaGTACACCGTGAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: RKFLVELGCRACSWYTVRCRACS*YTVRQS
Trigger: GCTCTGCCTCACGGTGTACCAGCTGCATGCCCTGCA...CCTCACGGTGTACCAGCTGCATGCCCTGCAGCCCAACTCCACCAAGAACTTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTGCTAGTTCTTGGTGGAGTTaGGCTGCAGGGCATGCAGCT +
Preference number: 4 (lower is better)
Translates to: VGMSRGRGRLPGDKLLGASSWWS*AAGHAA
Trigger: AGCTGCATGCCCTGCAGCCCAACTCCACCAAGAACT...AGCACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp TGGTGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGGGCGGAAGTTCTTGGTaGAGTTGGGCTGCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: WCSVVGMSRGRGRLPGDKGGSSW*SWAAGH
Trigger: ATGCCCTGCAGCCCAACTCCACCAAGAACTTCCGCC...CTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCACAGAGCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACGTGGCTCACCTCGGCGGAAGTTCTTGGTaGAGTTGGGCTGCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: GVVEPGDHALHFVHVAHLGGSSW*SWAAGH
Trigger: ATGCCCTGCAGCCCAACTCCACCAAGAACTTCCGCC...GAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp TGGGATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGGCTGGTGCTCTGTGGGCCTGGCGTTGGCACTaGCTGGTGCTCTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: WDREINSSLALALAGALWAWRWH*LVLCGG
Trigger: CCCACCACAGAGCACCAGCCAGTGCCAACGCCAGGC...CCACAGAGCACCAGCCAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATCCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
CDS-3UTR CCA 90 bp GATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGGCTGGTGCTCTGTGGTGGGCCTGGCGTTGGCACTaGCTGGTGCTCTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: DREINSSLALALAGALWWAWRWH*LVLCGG
Trigger: CCCACCACAGAGCACCAGCCAGTGCCAACGCCAGGC...CCACCACAGAGCACCAGCCAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
CDS-3UTR CCA 90 bp GAGCTGCAGGGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACATAGCAGCCTGGCGTTaGCACTGGCTGGTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: ELQGDGEVDQGVVEPGDHIAAWR*HWLVLC
Trigger: ACAGAGCACCAGCCAGTGCCAACGCCAGGCTGCTAT...GTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp TGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCATAGCAGCCTGGCGTTaGCACTGGCTGGTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: CSVVGMSRGRGRLPGDKLIAAWR*HWLVLC
Trigger: ACAGAGCACCAGCCAGTGCCAACGCCAGGCTGCTAT...GAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCACAGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
CDS-3UTR CCA 90 bp GGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGAATGTGGGACACCCTTaGCCCCGCCTCCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: GEVDQGVVEPGDHALHFVNVGHP*PRLPDL
Trigger: GAGGTCAGGGAGGCGGGGCCAAGGGTGTCCCACATT...CACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587377.5
ENST00000587843.5
CDS-3UTR CCA 90 bp TCTGTAGCTCCAGTAGCTGGAGAACACGGAGATCTTGTCCTTGAGCTGCTGGCAGGGGGACTCACCGCCTaGCTGAGGGCATCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: SVAPVAGEHGDLVLELLAGGLTA*LRASPC
Trigger: GCAGGGGGATGCCCTCAGCCAGGCGGTGAGTCCCCC...TGCCAGCAGCTCAAGGACAAGATCTCCGTGTTCTCCAGCTACTGGAGCTACAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000588201.5
3UTR CAA 72 bp GAGTCCAAAGATTCCCATGGTGATCAGAGGGCGGTGTaGGGAATGTGGGACACCCTTGGCCCCGCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: ESKDSHGDQRAV*GMWDTLGPASL
Trigger: CAGGGAGGCGGGGCCAAGGGTGTCCCACATTCCCAACACCGCCCTCTGATCACCATGGGAATCTTTGGACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR TCA 90 bp CCTCCTGGCACTTCCAGTGTCCATTCCCGGCAGTGCAAATGTGTTAGGTGGGGTAGACCAGGGCGTCGTTaGGCCAGGGGATCACGCACT +
Preference number: 4 (lower is better)
Translates to: PPGTSSVHSRQCKCVRWGRPGRR*ARGSRT
Trigger: AGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCT...ACCCCACCTAACACATTTGCACTGCCGGGAATGGACACTGGAAGTGCCAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR TCA 90 bp GATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGGCTGGTGCTCTGTGGTGGGCTGCAGGGAGACGGTaGAGTAGACCAGGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: DREINSSLALALAGALWWAAGRR*SRPGRR
Trigger: ACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAGC...CCACCACAGAGCACCAGCCAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
CDS-3UTR TCA 90 bp CTGCAGGGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACAAAGATTCCCATGGTaGTCAGAGGGCGGTGTTGGG +
Preference number: 4 (lower is better)
Translates to: LQGDGEVDQGVVEPGDHAQRFPW*SEGGVG
Trigger: CCCAACACCGCCCTCTGATCACCATGGGAATCTTTG...TGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587377.5
ENST00000587843.5
CDS-3UTR TCA 90 bp GGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGCGCCTGGCCCTGTCCTaGGTCCAAAGATTCCCATGG +
Preference number: 4 (lower is better)
Translates to: GEVDQGVVEPGDHALHFVRLALS*VQRFPW
Trigger: CCATGGGAATCTTTGGACTCAGGACAGGGCCAGGCG...CACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587377.5
ENST00000587843.5
CDS-3UTR GCA 90 bp GTGGCTCTGTCTGTGGCGTTCCTCACCATCCCCGGGACTCATAGCTCAGTGCCATGCTTCAACACAGCGTaGACCTCGTCGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: VALSVAFLTIPGTHSSVPCFNTA*TSSCSS
Trigger: GCTGCTGCACGACGAGGTGCACGCTGTGTTGAAGCA...TGGCACTGAGCTATGAGTCCCGGGGATGGTGAGGAACGCCACAGACAGAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR GCA 90 bp TGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCAGGATGTCCTGCAGCTaGTTCAACACAGCGTGCACC +
Preference number: 4 (lower is better)
Translates to: CSVVGMSRGRGRLPGDKLRMSCS*FNTACT
Trigger: GGTGCACGCTGTGTTGAAGCAGCTGCAGGACATCCT...GAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCACAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GTTGATGTAGACGTTGACCAGCAGGTCGGACGGCAGGGCAGGGGCGAACATCCGAGGATGTCCTGCAGCTaGTTCAACACAGCGTGCACC +
Preference number: 4 (lower is better)
Translates to: VDVDVDQQVGRQGRGEHPRMSCS*FNTACT
Trigger: GGTGCACGCTGTGTTGAAGCAGCTGCAGGACATCCT...CGGATGTTCGCCCCTGCCCTGCCGTCCGACCTGCTGGTCAACGTCTACATCAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTGCTTCCTTGAGGATGTCCTaGAGCTGCTTCAACACAGCG +
Preference number: 4 (lower is better)
Translates to: VGMSRGRGRLPGDKLLGASLRMS*SCFNTA
Trigger: CGCTGTGTTGAAGCAGCTGCAGGACATCCTCAAGGA...AGCACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp CTGCAGGGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCAAGGATGAAGTTCTCTTaGTTGGCGGGCCCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: LQGDGEVDQGVVEPGDHARMKFS*LAGPSV
Trigger: CACTGAGGGGCCCGCCAAGCAAGAGAACTTCATCCT...TGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACAGGATGAAGTTCTCTTaGTTGGCGGGCCCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: GDGEVDQGVVEPGDHALHRMKFS*LAGPSV
Trigger: CACTGAGGGGCCCGCCAAGCAAGAGAACTTCATCCT...GTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp AGGGACCTTGAGGACCTCAGCGCCCGTCTTGAACTGGTAGCTCTGGTCCCGGCTAGGATGAAGTTCTCTTaGTTGGCGGGCCCCTCAGTG +
Preference number: 4 (lower is better)
Translates to: RDLEDLSARLELVALVPARMKFS*LAGPSV
Trigger: CACTGAGGGGCCCGCCAAGCAAGAGAACTTCATCCT...AGCCGGGACCAGAGCTACCAGTTCAAGACGGGCGCTGAGGTCCTCAAGGTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588201.5
CDS-3UTR GCA 90 bp GACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTCTGAGGGCATCCCCCTaGAGAGTCAGCACACCCTTC +
Preference number: 4 (lower is better)
Translates to: DGEVDQGVVEPGDHALHFLRASP*RVSTPF
Trigger: GAAGGGTGTGCTGACTCTGCAGGGGGATGCCCTCAG...AAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587377.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGTCCCGGAAGGCGAAGTaGAGCAGCTGGTTGTTCCGG +
Preference number: 4 (lower is better)
Translates to: GEVDQGVVEPGDHALHFVSRKAK*SSWLFR
Trigger: CCGGAACAACCAGCTGCTGCACTTCGCCTTCCGGGA...CACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACGTGGCTCACCTCGCATCCTGGATCTGCTaGAGCTTCCACTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: GVVEPGDHALHFVHVAHLASWIC*SFHCLS
Trigger: GGACAAGCAGTGGAAGCTGCAGCAGATCCAGGATGC...GAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTTTGGGCTGCAGGGCATaGAGCTGGTACACCGTGAGG +
Preference number: 4 (lower is better)
Translates to: DGEVDQGVVEPGDHALHFLGCRA*SWYTVR
Trigger: CCTCACGGTGTACCAGCTGCATGCCCTGCAGCCCAA...AAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp AGGTGGGGTAGGGGGTGGGATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGTTGGGCTGCAGGGCATaGAGCTGGTACACCGTGAGG +
Preference number: 4 (lower is better)
Translates to: RWGRGWDREINSSLALALLGCRA*SWYTVR
Trigger: CCTCACGGTGTACCAGCTGCATGCCCTGCAGCCCAA...CAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATCCCACCCCCTACCCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp TGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCATCTTGTCCTTGAGCTaGTGGCAGAGCTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: CSVVGMSRGRGRLPGDKLILSLS*WQSCRE
Trigger: CTCCCTGCAGCTCTGCCAGCAGCTCAAGGACAAGAT...GAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCACAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
CDS-3UTR GCA 90 bp GTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTGCTAGACAAGCTCCTGGGTaGTGTGATCAGAAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: VGMSRGRGRLPGDKLLGARQAPG*CDQKGL
Trigger: CAGACCCTTCTGATCACAGCACCCAGGAGCTTGTCT...AGCACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
CDS-3UTR GCA 90 bp CCTCCTGGCACTTCCAGTGTCCATTCCCGGCAGTGCAAATGTGTTAGGTGGGGTACTGCGTCCATCAGCTaGAGGGAGAGGCGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: PPGTSSVHSRQCKCVRWGTASIS*RERRGW
Trigger: CCAACCCCGCCTCTCCCTGCAGCTGATGGACGCAGT...ACCCCACCTAACACATTTGCACTGCCGGGAATGGACACTGGAAGTGCCAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587377.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTGCTAGGTTCACATCCGTGTaGAAAGAACCCCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VGMSRGRGRLPGDKLLGARFTSV*KEPLSC
Trigger: GCAGGAGAGGGGTTCTTTGCACACGGATGTGAACCT...AGCACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588201.5
CDS-3UTR CCA 90 bp CGGAAGTTCTTGGTGGAGTTGGGCTGCAGGGCATGCAGCTGGTACACCGTGAGGAGCACACCCTTCACCTaGTCTGTGCCACAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RKFLVELGCRACSWYTVRSTPFT*SVPQLP
Trigger: AGGCAGCTGTGGCACAGACCAGGTGAAGGGTGTGCT...CCTCACGGTGTACCAGCTGCATGCCCTGCAGCCCAACTCCACCAAGAACTTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588201.5
CDS-3UTR CCA 90 bp GGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGTGCAGGGCATGCAGCTaGTACACCGTGAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: GEVDQGVVEPGDHALHFVCRACS*YTVRQS
Trigger: GCTCTGCCTCACGGTGTACCAGCTGCATGCCCTGCA...CACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp AGGGGGTGGGATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGGCTGGTGCTTGCAGGGCATGCAGCTaGTACACCGTGAGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: RGWDREINSSLALALAGACRACS*YTVRQS
Trigger: GCTCTGCCTCACGGTGTACCAGCTGCATGCCCTGCA...AGCACCAGCCAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATCCCACCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACAGTTCTTGGTGGAGTTaGGCTGCAGGGCATGCAGCT +
Preference number: 4 (lower is better)
Translates to: GDGEVDQGVVEPGDHALHSSWWS*AAGHAA
Trigger: AGCTGCATGCCCTGCAGCCCAACTCCACCAAGAACT...GTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp CAGGGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCAGTTCTTGGTGGAGTTaGGCTGCAGGGCATGCAGCT +
Preference number: 4 (lower is better)
Translates to: QGDGEVDQGVVEPGDHALSSWWS*AAGHAA
Trigger: AGCTGCATGCCCTGCAGCCCAACTCCACCAAGAACT...GAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTCTGGGCGGAAGTTCTTaGTGGAGTTGGGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: DGEVDQGVVEPGDHALHFLGGSS*WSWAAG
Trigger: CCCTGCAGCCCAACTCCACCAAGAACTTCCGCCCAG...AAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GGCACTTCCAGTGTCCATTCCCGGCAGTGCAAATGTGTTAGGTGGGGTAGGGGGAGCCCCACTCGAACATaGCCCCAGGGCTATGCAGCA +
Preference number: 4 (lower is better)
Translates to: GTSSVHSRQCKCVRWGRGSPTRT*PQGYAA
Trigger: TGCTGCATAGCCCTGGGGCCATGTTCGAGTGGGGCT...CCCCCTACCCCACCTAACACATTTGCACTGCCGGGAATGGACACTGGAAGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGGCGTTGGCACTGGCTaGTGCTCTGTGGTGGGTATG +
Preference number: 4 (lower is better)
Translates to: DGEVDQGVVEPGDHALHFGVGTG*CSVVGM
Trigger: CATACCCACCACAGAGCACCAGCCAGTGCCAACGCC...AAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGGGCGTTGGCACTGGCTaGTGCTCTGTGGTGGGTATG +
Preference number: 4 (lower is better)
Translates to: GEVDQGVVEPGDHALHFVGVGTG*CSVVGM
Trigger: CATACCCACCACAGAGCACCAGCCAGTGCCAACGCC...CACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GCCCTGGACTGGGGCTATGAAACACAGTCACCAGCACTATACTCACTCCTAGGGGCCTGGCGTTGGCACTaGCTGGTGCTCTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: ALDWGYETQSPALYSLLGAWRWH*LVLCGG
Trigger: CCCACCACAGAGCACCAGCCAGTGCCAACGCCAGGC...CCCTAGGAGTGAGTATAGTGCTGGTGACTGTGTTTCATAGCCCCAGTCCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR CCA 90 bp GTGGCTCTGTCTGTGGCGTTCCTCACCATCCCCGGGACTCATAGCTCAGTGCCAATAGCAGCCTGGCGTTaGCACTGGCTGGTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: VALSVAFLTIPGTHSSVPIAAWR*HWLVLC
Trigger: ACAGAGCACCAGCCAGTGCCAACGCCAGGCTGCTAT...TGGCACTGAGCTATGAGTCCCGGGGATGGTGAGGAACGCCACAGACAGAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR CCA 90 bp GCCCTGGACTGGGGCTATGAAACACAGTCACCAGCACTATACTCACTCCTAGGGGCGGTGTTGGGAATGTaGGACACCCTTGGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: ALDWGYETQSPALYSLLGAVLGM*DTLGPA
Trigger: GGCGGGGCCAAGGGTGTCCCACATTCCCAACACCGC...CCCTAGGAGTGAGTATAGTGCTGGTGACTGTGTTTCATAGCCCCAGTCCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR CCA 90 bp TGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCATCAGAGGGCGGTGTTaGGAATGTGGGACACCCTTG +
Preference number: 4 (lower is better)
Translates to: CSVVGMSRGRGRLPGDKLIRGRC*ECGTPL
Trigger: CAAGGGTGTCCCACATTCCCAACACCGCCCTCTGAT...GAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCACAGAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR CCA 90 bp GCTGGGCGGAAGTTCTTGGTGGAGTTGGGCTGCAGGGCATGCAGCTGGTACACCATCAGAGGGCGGTGTTaGGAATGTGGGACACCCTTG +
Preference number: 4 (lower is better)
Translates to: AGRKFLVELGCRACSWYTIRGRC*ECGTPL
Trigger: CAAGGGTGTCCCACATTCCCAACACCGCCCTCTGAT...GGTGTACCAGCTGCATGCCCTGCAGCCCAACTCCACCAAGAACTTCCGCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587843.5
CDS-3UTR CCA 90 bp GTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACGTGCATGCTCTTCCCCATTaGCAGGATGGGAGGGGACAG +
Preference number: 4 (lower is better)
Translates to: VDQGVVEPGDHALHFVHVHALPH*QDGRGQ
Trigger: CTGTCCCCTCCCATCCTGCCAATGGGGAAGAGCATG...CACGTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588201.5
CDS-3UTR CCA 90 bp CATCACTGCGTCCATCAGCTGCAGGGAGAGGCGGGGTTGGCTCTGCGTCCTCCCTGTACAGAGAGAAAGTaGGAGCTCCCATGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: HHCVHQLQGEAGLALRPPCTERK*ELPCSS
Trigger: GGAAGAGCATGGGAGCTCCCACTTTCTCTCTGTACA...GGGAGGACGCAGAGCCAACCCCGCCTCTCCCTGCAGCTGATGGACGCAGTGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588201.5
CDS-3UTR CCA 90 bp CCTCCTGGCACTTCCAGTGTCCATTCCCGGCAGTGCAAATGTGTTAGGTGGGGTAGGGAGAGGCGGGGTTaGCTCAGCGCCCGTCTTGAA +
Preference number: 4 (lower is better)
Translates to: PPGTSSVHSRQCKCVRWGRERRG*LSARLE
Trigger: TTCAAGACGGGCGCTGAGCCAACCCCGCCTCTCCCT...ACCCCACCTAACACATTTGCACTGCCGGGAATGGACACTGGAAGTGCCAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587377.5
CDS-3UTR TCA 90 bp TCTGTAGCTCCAGTAGCTGGAGAACACGGAGATCTTGTCCTTGAGCTGCTGGCATCACATCCGCCTGGCTaGGGGCATCCCCCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: SVAPVAGEHGDLVLELLASHPPG*GHPPAE
Trigger: CTCTGCAGGGGGATGCCCTCAGCCAGGCGGATGTGA...TGCCAGCAGCTCAAGGACAAGATCTCCGTGTTCTCCAGCTACTGGAGCTACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587377.5
CDS-3UTR TCA 90 bp ACACAGTCACCAGCACTATACTCACTCCTAGGGTGGCTCTGTCTGTGGCGTTCCGCTGCAGGGAGACGGTaGAGTAGACCAGGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: TQSPALYSLLGWLCLWRSAAGRR*SRPGRR
Trigger: ACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAGC...GGAACGCCACAGACAGAGCCACCCTAGGAGTGAGTATAGTGCTGGTGACTGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR TCA 90 bp AGGTGGGGTAGGGGGTGGGATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGCGGAGATCTTGTCCTTaGGCTGCTGGCAGAGCTGCA +
Preference number: 4 (lower is better)
Translates to: RWGRGWDREINSSLALALRRSCP*AAGRAA
Trigger: TGCAGCTCTGCCAGCAGCTCAAGGACAAGATCTCCG...CAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATCCCACCCCCTACCCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
CDS-3UTR GCA 90 bp AGGTGGGGTAGGGGGTGGGATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGTGCTTCAACACAGCGTaGACCTCGTCGTGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: RWGRGWDREINSSLALALCFNTA*TSSCSS
Trigger: GCTGCTGCACGACGAGGTGCACGCTGTGTTGAAGCA...CAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATCCCACCCCCTACCCCACCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGGCTGGTGCTCTGTGGTGGTGCTGCAGCTTCCACTaGTTGTCCTCCCGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: DREINSSLALALAGALWWCCSFH*LSSRKA
Trigger: CGCCTTCCGGGAGGACAAGCAGTGGAAGCTGCAGCA...CCACCACAGAGCACCAGCCAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
CDS-3UTR GCA 90 bp GATTCCCATGGTGATCAGAGGGCGGTGTTGGGAATGTGGGACACCCTTGGCCCCGCATCCTGGATCTGCTaGAGCTTCCACTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: DSHGDQRAVLGMWDTLGPASWIC*SFHCLS
Trigger: GGACAAGCAGTGGAAGCTGCAGCAGATCCAGGATGC...GGGGCCAAGGGTGTCCCACATTCCCAACACCGCCCTCTGATCACCATGGGAATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR GCA 90 bp GTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACGTGGCATCCTGGATCTGCTaGAGCTTCCACTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: VDQGVVEPGDHALHFVHVASWIC*SFHCLS
Trigger: GGACAAGCAGTGGAAGCTGCAGCAGATCCAGGATGC...CACGTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGTTGGTGGAGTTGGGCTaGAGGGCATGCAGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: GEVDQGVVEPGDHALHFVLVELG*RACSWY
Trigger: GTACCAGCTGCATGCCCTGCAGCCCAACTCCACCAA...CACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp AGGGGGTGGGATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGGCTGGTGCTACGCACTCCACTTTGTaGACGTGGCTCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RGWDREINSSLALALAGATHSTL*TWLTSR
Trigger: CCTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCGT...AGCACCAGCCAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATCCCACCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACGTGATCTTGTCCTTGAGCTaGTGGCAGAGCTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: VDQGVVEPGDHALHFVHVILSLS*WQSCRE
Trigger: CTCCCTGCAGCTCTGCCAGCAGCTCAAGGACAAGAT...CACGTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp TGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCAGACAAGCTCCTGGGTaGTGTGATCAGAAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: CSVVGMSRGRGRLPGDKLRQAPG*CDQKGL
Trigger: CAGACCCTTCTGATCACAGCACCCAGGAGCTTGTCT...GAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCACAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
CDS-3UTR GCA 90 bp TGGTGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGAGACAAGCTCCTGGGTaGTGTGATCAGAAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: WCSVVGMSRGRGRLPGDKRQAPG*CDQKGL
Trigger: CAGACCCTTCTGATCACAGCACCCAGGAGCTTGTCT...CTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCACAGAGCACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
CDS-3UTR GCA 90 bp GTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACGTGGCTCACCTCCAGGTTGGCACTGGCTGGTaGTCTGTGGTGGGTATGAGT +
Preference number: 4 (lower is better)
Translates to: VVEPGDHALHFVHVAHLQVGTGW*SVVGMS
Trigger: ACTCATACCCACCACAGAGCACCAGCCAGTGCCAAC...CTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GCACTCCACTTTGTGCACGTGGCTCACCTCCAGGCGCTGAGAGCCCCACTCGAATGGTTTCTGGCATCCTaGATCTGCTGCAGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: ALHFVHVAHLQALRAPLEWFLAS*ICCSFH
Trigger: GTGGAAGCTGCAGCAGATCCAGGATGCCAGAAACCA...TTCGAGTGGGGCTCTCAGCGCCTGGAGGTGAGCCACGTGCACAAAGTGGAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp TGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCTGGTTTCTGGCATCCTaGATCTGCTGCAGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: CSVVGMSRGRGRLPGDKLWFLAS*ICCSFH
Trigger: GTGGAAGCTGCAGCAGATCCAGGATGCCAGAAACCA...GAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCACAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
CDS-3UTR CCA 90 bp GTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTGCTATGGCTTGGCTCACATaGTTTCTGGCATCCTGGATC +
Preference number: 4 (lower is better)
Translates to: VGMSRGRGRLPGDKLLGAMAWLT*FLASWI
Trigger: GATCCAGGATGCCAGAAACCATGTGAGCCAAGCCAT...AGCACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACGGCGGAAGTTCTTGGTaGAGTTGGGCTGCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: EVDQGVVEPGDHALHFVHGGSSW*SWAAGH
Trigger: ATGCCCTGCAGCCCAACTCCACCAAGAACTTCCGCC...GTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp CCTCCTGGCACTTCCAGTGTCCATTCCCGGCAGTGCAAATGTGTTAGGTGGGGTAGCCCCACTCGAACATaGCCCCAGGGCTATGCAGCA +
Preference number: 4 (lower is better)
Translates to: PPGTSSVHSRQCKCVRWGSPTRT*PQGYAA
Trigger: TGCTGCATAGCCCTGGGGCCATGTTCGAGTGGGGCT...ACCCCACCTAACACATTTGCACTGCCGGGAATGGACACTGGAAGTGCCAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp CCTCCTGGCACTTCCAGTGTCCATTCCCGGCAGTGCAAATGTGTTAGGTGGGGTGGCGTTGGCACTGGCTaGTGCTCTGTGGTGGGTATG +
Preference number: 4 (lower is better)
Translates to: PPGTSSVHSRQCKCVRWGGVGTG*CSVVGM
Trigger: CATACCCACCACAGAGCACCAGCCAGTGCCAACGCC...ACCCCACCTAACACATTTGCACTGCCGGGAATGGACACTGGAAGTGCCAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp TGGGATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGGCTGGTGCTCTGTGGGGCGTTGGCACTGGCTaGTGCTCTGTGGTGGGTATG +
Preference number: 4 (lower is better)
Translates to: WDREINSSLALALAGALWGVGTG*CSVVGM
Trigger: CATACCCACCACAGAGCACCAGCCAGTGCCAACGCC...CCACAGAGCACCAGCCAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
CDS-3UTR CCA 90 bp TCTGTAGCTCCAGTAGCTGGAGAACACGGAGATCTTGTCCTTGAGCTGCTGGCAGCCTGGCGTTGGCACTaGCTGGTGCTCTGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: SVAPVAGEHGDLVLELLAAWRWH*LVLCGG
Trigger: CCCACCACAGAGCACCAGCCAGTGCCAACGCCAGGC...TGCCAGCAGCTCAAGGACAAGATCTCCGTGTTCTCCAGCTACTGGAGCTACAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTATAGCAGCCTGGCGTTaGCACTGGCTGGTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: DGEVDQGVVEPGDHALHFIAAWR*HWLVLC
Trigger: ACAGAGCACCAGCCAGTGCCAACGCCAGGCTGCTAT...AAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GTGGCTCTGTCTGTGGCGTTCCTCACCATCCCCGGGACTCATAGCTCAGTGCCATACTCACTCCTAGGGTaGCTCTGTCTGTGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: VALSVAFLTIPGTHSSVPYSLLG*LCLWRS
Trigger: GGAACGCCACAGACAGAGCCACCCTAGGAGTGAGTA...TGGCACTGAGCTATGAGTCCCGGGGATGGTGAGGAACGCCACAGACAGAGCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR CCA 90 bp GTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTGCTTCCACTTTGTGCACGTaGCTCACATGGTTTCTGGCA +
Preference number: 4 (lower is better)
Translates to: VGMSRGRGRLPGDKLLGASTLCT*LTWFLA
Trigger: TGCCAGAAACCATGTGAGCCACGTGCACAAAGTGGA...AGCACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592019.1
CDS-3UTR TCA 90 bp GCCCTGGACTGGGGCTATGAAACACAGTCACCAGCACTATACTCACTCCTAGGGGCAGAGAGGCCTCCTTaGGGATGTCCTGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: ALDWGYETQSPALYSLLGAERPP*GCPAAA
Trigger: AGCAGCTGCAGGACATCCTCAAGGAGGCCTCTCTGC...CCCTAGGAGTGAGTATAGTGCTGGTGACTGTGTTTCATAGCCCCAGTCCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR GCA 90 bp GACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTAGGATGTCCTGCAGCTaGTTCAACACAGCGTGCACC +
Preference number: 4 (lower is better)
Translates to: DGEVDQGVVEPGDHALHFRMSCS*FNTACT
Trigger: GGTGCACGCTGTGTTGAAGCAGCTGCAGGACATCCT...AAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACGCATCCTGGATCTGCTaGAGCTTCCACTGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: EVDQGVVEPGDHALHFVHASWIC*SFHCLS
Trigger: GGACAAGCAGTGGAAGCTGCAGCAGATCCAGGATGC...GTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp GATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGGCTGGTGCTCTGTGGTGGACGCACTCCACTTTGTaGACGTGGCTCACCTCCAGG +
Preference number: 4 (lower is better)
Translates to: DREINSSLALALAGALWWTHSTL*TWLTSR
Trigger: CCTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCGT...CCACCACAGAGCACCAGCCAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp TGGGATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGGCTGGTGCTCTGTGGAGCACACCCTTCACCTaGTCTGTGCCACAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: WDREINSSLALALAGALWSTPFT*SVPQLP
Trigger: AGGCAGCTGTGGCACAGACCAGGTGAAGGGTGTGCT...CCACAGAGCACCAGCCAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GATTCCCATGGTGATCAGAGGGCGGTGTTGGGAATGTGGGACACCCTTGGCCCCTGGTTTCTGGCATCCTaGATCTGCTGCAGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: DSHGDQRAVLGMWDTLGPWFLAS*ICCSFH
Trigger: GTGGAAGCTGCAGCAGATCCAGGATGCCAGAAACCA...GGGGCCAAGGGTGTCCCACATTCCCAACACCGCCCTCTGATCACCATGGGAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR CCA 90 bp CTGCAGGGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCAATGGCTTGGCTCACATaGTTTCTGGCATCCTGGATC +
Preference number: 4 (lower is better)
Translates to: LQGDGEVDQGVVEPGDHAMAWLT*FLASWI
Trigger: GATCCAGGATGCCAGAAACCATGTGAGCCAAGCCAT...TGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GGCACTTCCAGTGTCCATTCCCGGCAGTGCAAATGTGTTAGGTGGGGTAGGGGGAGTTCTTGGTGGAGTTaGGCTGCAGGGCATGCAGCT +
Preference number: 4 (lower is better)
Translates to: GTSSVHSRQCKCVRWGRGSSWWS*AAGHAA
Trigger: AGCTGCATGCCCTGCAGCCCAACTCCACCAAGAACT...CCCCCTACCCCACCTAACACATTTGCACTGCCGGGAATGGACACTGGAAGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACAGTTCTTGGTGGAGTTaGGCTGCAGGGCATGCAGCT +
Preference number: 4 (lower is better)
Translates to: EVDQGVVEPGDHALHFVHSSWWS*AAGHAA
Trigger: AGCTGCATGCCCTGCAGCCCAACTCCACCAAGAACT...GTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp ACACAGTCACCAGCACTATACTCACTCCTAGGGTGGCTCTGTCTGTGGCGTTCCCTGGGCGGAAGTTCTTaGTGGAGTTGGGCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: TQSPALYSLLGWLCLWRSLGGSS*WSWAAG
Trigger: CCCTGCAGCCCAACTCCACCAAGAACTTCCGCCCAG...GGAACGCCACAGACAGAGCCACCCTAGGAGTGAGTATAGTGCTGGTGACTGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR CCA 90 bp CTGGTCAGCTGCAGCATCACTGCGTCCATCAGCTGCAGGGAGAGGCGGGGTTGGTGTAGCTCCAGTAGCTaGAGAACACGGAGATCTTGT +
Preference number: 4 (lower is better)
Translates to: LVSCSITASISCRERRGWCSSSS*RTRRSC
Trigger: ACAAGATCTCCGTGTTCTCCAGCTACTGGAGCTACA...CCAACCCCGCCTCTCCCTGCAGCTGATGGACGCAGTGATGCTGCAGCTGACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588201.5
CDS-3UTR CCA 90 bp CTTAGACAGCCCTGGACTGGGGCTATGAAACACAGTCACCAGCACTATACTCACGCGGTGTTGGGAATGTaGGACACCCTTGGCCCCGCC +
Preference number: 4 (lower is better)
Translates to: LRQPWTGAMKHSHQHYTHAVLGM*DTLGPA
Trigger: GGCGGGGCCAAGGGTGTCCCACATTCCCAACACCGC...GTGAGTATAGTGCTGGTGACTGTGTTTCATAGCCCCAGTCCAGGGCTGTCTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR GCA 90 bp GACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTTCCTTGAGGATGTCCTaGAGCTGCTTCAACACAGCG +
Preference number: 4 (lower is better)
Translates to: DGEVDQGVVEPGDHALHFSLRMS*SCFNTA
Trigger: CGCTGTGTTGAAGCAGCTGCAGGACATCCTCAAGGA...AAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp AGACAGCCCTGGACTGGGGCTATGAAACACAGTCACCAGCACTATACTCACTCCCTGAGGGCATCCCCCTaGAGAGTCAGCACACCCTTC +
Preference number: 4 (lower is better)
Translates to: RQPWTGAMKHSHQHYTHSLRASP*RVSTPF
Trigger: GAAGGGTGTGCTGACTCTGCAGGGGGATGCCCTCAG...GGAGTGAGTATAGTGCTGGTGACTGTGTTTCATAGCCCCAGTCCAGGGCTGTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322048.12
ENST00000587377.5
CDS-3UTR GCA 90 bp GTAGCTCTGGTCCCGGCTGGTAAGCAGGTAAATGGCTTGGCTCACATGGTTTCTTGCTGCAGCTTCCACTaGTTGTCCTCCCGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: VALVPAGKQVNGLAHMVSCCSFH*LSSRKA
Trigger: CGCCTTCCGGGAGGACAAGCAGTGGAAGCTGCAGCA...AGAAACCATGTGAGCCAAGCCATTTACCTGCTTACCAGCCGGGACCAGAGCTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp AAAGATTCCCATGGTGATCAGAGGGCGGTGTTGGGAATGTGGGACACCCTTGGCTTGGTGGAGTTGGGCTaGAGGGCATGCAGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: KDSHGDQRAVLGMWDTLGLVELG*RACSWY
Trigger: GTACCAGCTGCATGCCCTGCAGCCCAACTCCACCAA...GCCAAGGGTGTCCCACATTCCCAACACCGCCCTCTGATCACCATGGGAATCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR GCA 90 bp CCTCCTGGCACTTCCAGTGTCCATTCCCGGCAGTGCAAATGTGTTAGGTGGGGTATCTTGTCCTTGAGCTaGTGGCAGAGCTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: PPGTSSVHSRQCKCVRWGILSLS*WQSCRE
Trigger: CTCCCTGCAGCTCTGCCAGCAGCTCAAGGACAAGAT...ACCCCACCTAACACATTTGCACTGCCGGGAATGGACACTGGAAGTGCCAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACTGGTTTCTGGCATCCTaGATCTGCTGCAGCTTCCAC +
Preference number: 4 (lower is better)
Translates to: EVDQGVVEPGDHALHFVHWFLAS*ICCSFH
Trigger: GTGGAAGCTGCAGCAGATCCAGGATGCCAGAAACCA...GTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp TGTCCTGAGTCCAAAGATTCCCATGGTGATCAGAGGGCGGTGTTGGGAATGTGGGCCGGTTTCGGGCTCTaGTCAGCTGCAGCATCACTG +
Preference number: 4 (lower is better)
Translates to: CPESKDSHGDQRAVLGMWAGFGL*SAAASL
Trigger: CAGTGATGCTGCAGCTGACCAGAGCCCGAAACCGGC...CCACATTCCCAACACCGCCCTCTGATCACCATGGGAATCTTTGGACTCAGGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR CCA 90 bp GCACTCCACTTTGTGCACGTGGCTCACCTCCAGGCGCTGAGAGCCCCACTCGAATGTAGCTCCAGTAGCTaGAGAACACGGAGATCTTGT +
Preference number: 4 (lower is better)
Translates to: ALHFVHVAHLQALRAPLECSSSS*RTRRSC
Trigger: ACAAGATCTCCGTGTTCTCCAGCTACTGGAGCTACA...TTCGAGTGGGGCTCTCAGCGCCTGGAGGTGAGCCACGTGCACAAAGTGGAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp CTTAGACAGCCCTGGACTGGGGCTATGAAACACAGTCACCAGCACTATACTCACAATGTGGGACACCCTTaGCCCCGCCTCCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: LRQPWTGAMKHSHQHYTHNVGHP*PRLPDL
Trigger: GAGGTCAGGGAGGCGGGGCCAAGGGTGTCCCACATT...GTGAGTATAGTGCTGGTGACTGTGTTTCATAGCCCCAGTCCAGGGCTGTCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR CCA 90 bp AGGGGGTGGGATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGGCTGGTGCTTGCACGTGGCTCACATaGTTTCTGGCATCCTGGATC +
Preference number: 4 (lower is better)
Translates to: RGWDREINSSLALALAGACTWLT*FLASWI
Trigger: GATCCAGGATGCCAGAAACCATGTGAGCCACGTGCA...AGCACCAGCCAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATCCCACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000592019.1
CDS-3UTR CCA 90 bp GGTAAGCAGGTAAATGGCTTGGCTCACATGGTTTCTGGCATCCTGGATCTGCTGTCCCACCCAGCCCAGTaGCTACTGTTCCCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: GKQVNGLAHMVSGILDLLSHPAQ*LLFPGP
Trigger: GGGACCTGGGAACAGTAGCCACTGGGCTGGGTGGGA...CAGCAGATCCAGGATGCCAGAAACCATGTGAGCCAAGCCATTTACCTGCTTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588201.5
CDS-3UTR TCA 90 bp AAAGATTCCCATGGTGATCAGAGGGCGGTGTTGGGAATGTGGGACACCCTTGGCCACAGCTGCCTAGGATaGAGTTCTCTTGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: KDSHGDQRAVLGMWDTLGHSCLG*SSLAWR
Trigger: CCGCCAAGCAAGAGAACTTCATCCTAGGCAGCTGTG...GCCAAGGGTGTCCCACATTCCCAACACCGCCCTCTGATCACCATGGGAATCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR TCA 90 bp TATGAAACACAGTCACCAGCACTATACTCACTCCTAGGGTGGCTCTGTCTGTGGAGACCAGGGCGTCGTTaGGCCAGGGGATCACGCACT +
Preference number: 4 (lower is better)
Translates to: YETQSPALYSLLGWLCLWRPGRR*ARGSRT
Trigger: AGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCT...CCACAGACAGAGCCACCCTAGGAGTGAGTATAGTGCTGGTGACTGTGTTTCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR TCA 90 bp TATGAAACACAGTCACCAGCACTATACTCACTCCTAGGGTGGCTCTGTCTGTGGGCTGCAGGGAGACGGTaGAGTAGACCAGGGCGTCGT +
Preference number: 4 (lower is better)
Translates to: YETQSPALYSLLGWLCLWAAGRR*SRPGRR
Trigger: ACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAGC...CCACAGACAGAGCCACCCTAGGAGTGAGTATAGTGCTGGTGACTGTGTTTCATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR GCA 90 bp CCTCCTGGCACTTCCAGTGTCCATTCCCGGCAGTGCAAATGTGTTAGGTGGGGTTCCTTGAGGATGTCCTaGAGCTGCTTCAACACAGCG +
Preference number: 4 (lower is better)
Translates to: PPGTSSVHSRQCKCVRWGSLRMS*SCFNTA
Trigger: CGCTGTGTTGAAGCAGCTGCAGGACATCCTCAAGGA...ACCCCACCTAACACATTTGCACTGCCGGGAATGGACACTGGAAGTGCCAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp CTTAGACAGCCCTGGACTGGGGCTATGAAACACAGTCACCAGCACTATACTCACTTGGGCTGCAGGGCATaGAGCTGGTACACCGTGAGG +
Preference number: 4 (lower is better)
Translates to: LRQPWTGAMKHSHQHYTHLGCRA*SWYTVR
Trigger: CCTCACGGTGTACCAGCTGCATGCCCTGCAGCCCAA...GTGAGTATAGTGCTGGTGACTGTGTTTCATAGCCCCAGTCCAGGGCTGTCTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR GCA 90 bp TCTGTAGCTCCAGTAGCTGGAGAACACGGAGATCTTGTCCTTGAGCTGCTGGCATTGGTGGAGTTGGGCTaGAGGGCATGCAGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: SVAPVAGEHGDLVLELLALVELG*RACSWY
Trigger: GTACCAGCTGCATGCCCTGCAGCCCAACTCCACCAA...TGCCAGCAGCTCAAGGACAAGATCTCCGTGTTCTCCAGCTACTGGAGCTACAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp AGGTGGGGTAGGGGGTGGGATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGACGCACTCCACTTTGTaGACGTGGCTCACATGGTTT +
Preference number: 4 (lower is better)
Translates to: RWGRGWDREINSSLALALTHSTL*TWLTWF
Trigger: AAACCATGTGAGCCACGTGCACAAAGTGGAGTGCGT...CAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATCCCACCCCCTACCCCACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000592019.1
CDS-3UTR CCA 90 bp GACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTATGGCTTGGCTCACATaGTTTCTGGCATCCTGGATC +
Preference number: 4 (lower is better)
Translates to: DGEVDQGVVEPGDHALHFMAWLT*FLASWI
Trigger: GATCCAGGATGCCAGAAACCATGTGAGCCAAGCCAT...AAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GGCACTTCCAGTGTCCATTCCCGGCAGTGCAAATGTGTTAGGTGGGGTAGGGGGATGGCTTGGCTCACATaGTTTCTGGCATCCTGGATC +
Preference number: 4 (lower is better)
Translates to: GTSSVHSRQCKCVRWGRGMAWLT*FLASWI
Trigger: GATCCAGGATGCCAGAAACCATGTGAGCCAAGCCAT...CCCCCTACCCCACCTAACACATTTGCACTGCCGGGAATGGACACTGGAAGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp GAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACATGGCTTGGCTCACATaGTTTCTGGCATCCTGGATC +
Preference number: 4 (lower is better)
Translates to: EVDQGVVEPGDHALHFVHMAWLT*FLASWI
Trigger: GATCCAGGATGCCAGAAACCATGTGAGCCAAGCCAT...GTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CCA 90 bp TTTCTTAGACAGCCCTGGACTGGGGCTATGAAACACAGTCACCAGCACTATACTCACCGCGCCCCCAGCTaGGCGGAAGTTCTTGGTGGA +
Preference number: 4 (lower is better)
Translates to: FLRQPWTGAMKHSHQHYTHRAPS*AEVLGG
Trigger: TCCACCAAGAACTTCCGCCCAGCTGGGGGCGCGGTG...AGTATAGTGCTGGTGACTGTGTTTCATAGCCCCAGTCCAGGGCTGTCTAAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
3UTR CAA 72 bp GTAGCTCTGGTCCCGGCTGGTAAGCAGGTAAATGGCTaGGCTCACATGGTTTCTGGCATCCTGGATCTGCTG +
Preference number: 4 (lower is better)
Translates to: VALVPAGKQVNG*AHMVSGILDLL
Trigger: CAGCAGATCCAGGATGCCAGAAACCATGTGAGCCAAGCCATTTACCTGCTTACCAGCCGGGACCAGAGCTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
CDS-3UTR TCA 90 bp TGTCCTGAGTCCAAAGATTCCCATGGTGATCAGAGGGCGGTGTTGGGAATGTGGCACAGCTGCCTAGGATaGAGTTCTCTTGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: CPESKDSHGDQRAVLGMWHSCLG*SSLAWR
Trigger: CCGCCAAGCAAGAGAACTTCATCCTAGGCAGCTGTG...CCACATTCCCAACACCGCCCTCTGATCACCATGGGAATCTTTGGACTCAGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR GCA 90 bp TATGAAACACAGTCACCAGCACTATACTCACTCCTAGGGTGGCTCTGTCTGTGGTGCTGCAGCTTCCACTaGTTGTCCTCCCGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: YETQSPALYSLLGWLCLWCCSFH*LSSRKA
Trigger: CGCCTTCCGGGAGGACAAGCAGTGGAAGCTGCAGCA...CCACAGACAGAGCCACCCTAGGAGTGAGTATAGTGCTGGTGACTGTGTTTCATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR GCA 90 bp GCCCTGGACTGGGGCTATGAAACACAGTCACCAGCACTATACTCACTCCTAGGGAGACAAGCTCCTGGGTaGTGTGATCAGAAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: ALDWGYETQSPALYSLLGRQAPG*CDQKGL
Trigger: CAGACCCTTCTGATCACAGCACCCAGGAGCTTGTCT...CCCTAGGAGTGAGTATAGTGCTGGTGACTGTGTTTCATAGCCCCAGTCCAGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR CCA 90 bp GGCACTTCCAGTGTCCATTCCCGGCAGTGCAAATGTGTTAGGTGGGGTAGGGGGTGTAGCTCCAGTAGCTaGAGAACACGGAGATCTTGT +
Preference number: 4 (lower is better)
Translates to: GTSSVHSRQCKCVRWGRGCSSSS*RTRRSC
Trigger: ACAAGATCTCCGTGTTCTCCAGCTACTGGAGCTACA...CCCCCTACCCCACCTAACACATTTGCACTGCCGGGAATGGACACTGGAAGTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR TCA 90 bp GGTAAGCAGGTAAATGGCTTGGCTCACATGGTTTCTGGCATCCTGGATCTGCTGCACAGCTGCCTAGGATaGAGTTCTCTTGCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: GKQVNGLAHMVSGILDLLHSCLG*SSLAWR
Trigger: CCGCCAAGCAAGAGAACTTCATCCTAGGCAGCTGTG...CAGCAGATCCAGGATGCCAGAAACCATGTGAGCCAAGCCATTTACCTGCTTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
CDS-3UTR GCA 90 bp TTTCTTAGACAGCCCTGGACTGGGGCTATGAAACACAGTCACCAGCACTATACTTGCTGCAGCTTCCACTaGTTGTCCTCCCGGAAGGCG +
Preference number: 4 (lower is better)
Translates to: FLRQPWTGAMKHSHQHYTCCSFH*LSSRKA
Trigger: CGCCTTCCGGGAGGACAAGCAGTGGAAGCTGCAGCA...AGTATAGTGCTGGTGACTGTGTTTCATAGCCCCAGTCCAGGGCTGTCTAAGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR CCA 90 bp TATGAAACACAGTCACCAGCACTATACTCACTCCTAGGGTGGCTCTGTCTGTGGAGCACACCCTTCACCTaGTCTGTGCCACAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: YETQSPALYSLLGWLCLWSTPFT*SVPQLP
Trigger: AGGCAGCTGTGGCACAGACCAGGTGAAGGGTGTGCT...CCACAGACAGAGCCACCCTAGGAGTGAGTATAGTGCTGGTGACTGTGTTTCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322048.12
ENST00000587377.5
CDS-3UTR CCA 90 bp ACCGATCCCGGGAGAAGGTGTGAGGGTTGCTGTCATTTTCCAAAGGAGAAAACTGCGAAGTGCAGCAGCTaGTTGTTCCGGGGCATCTTC +
Preference number: 4 (lower is better)
Translates to: TDPGRRCEGCCHFPKEKTAKCSS*LFRGIF
Trigger: GAAGATGCCCCGGAACAACCAGCTGCTGCACTTCGC...AGTTTTCTCCTTTGGAAAATGACAGCAACCCTCACACCTTCTCCCGGGATCGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000588201.5
CDS-3UTR CCA 90 bp TGGGATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGGCTGGTGCTCTGTGGTGTAGCTCCAGTAGCTaGAGAACACGGAGATCTTGT +
Preference number: 4 (lower is better)
Translates to: WDREINSSLALALAGALWCSSSS*RTRRSC
Trigger: ACAAGATCTCCGTGTTCTCCAGCTACTGGAGCTACA...CCACAGAGCACCAGCCAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
CDS-3UTR CCA 90 bp CTTAGACAGCCCTGGACTGGGGCTATGAAACACAGTCACCAGCACTATACTCACTACTCACTCCTAGGGTaGCTCTGTCTGTGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: LRQPWTGAMKHSHQHYTHYSLLG*LCLWRS
Trigger: GGAACGCCACAGACAGAGCCACCCTAGGAGTGAGTA...GTGAGTATAGTGCTGGTGACTGTGTTTCATAGCCCCAGTCCAGGGCTGTCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR CCA 90 bp GATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGGCTGGTGCTCTGTGGTGGTTTCTTAGACAGCCCTaGACTGGGGCTATGAAACAC +
Preference number: 4 (lower is better)
Translates to: DREINSSLALALAGALWWFLRQP*TGAMKH
Trigger: GTGTTTCATAGCCCCAGTCCAGGGCTGTCTAAGAAA...CCACCACAGAGCACCAGCCAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR CCA 90 bp GCCCTGGACTGGGGCTATGAAACACAGTCACCAGCACTATACTCACTCCTAGGGTTTCTTAGACAGCCCTaGACTGGGGCTATGAAACAC +
Preference number: 4 (lower is better)
Translates to: ALDWGYETQSPALYSLLGFLRQP*TGAMKH
Trigger: GTGTTTCATAGCCCCAGTCCAGGGCTGTCTAAGAAA...CCCTAGGAGTGAGTATAGTGCTGGTGACTGTGTTTCATAGCCCCAGTCCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR GCA 90 bp TTTCTTAGACAGCCCTGGACTGGGGCTATGAAACACAGTCACCAGCACTATACTATCTTGTCCTTGAGCTaGTGGCAGAGCTGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: FLRQPWTGAMKHSHQHYTILSLS*WQSCRE
Trigger: CTCCCTGCAGCTCTGCCAGCAGCTCAAGGACAAGAT...AGTATAGTGCTGGTGACTGTGTTTCATAGCCCCAGTCCAGGGCTGTCTAAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR CCA 90 bp AGACAGCCCTGGACTGGGGCTATGAAACACAGTCACCAGCACTATACTCACTCCTTTCTTAGACAGCCCTaGACTGGGGCTATGAAACAC +
Preference number: 4 (lower is better)
Translates to: RQPWTGAMKHSHQHYTHSFLRQP*TGAMKH
Trigger: GTGTTTCATAGCCCCAGTCCAGGGCTGTCTAAGAAA...GGAGTGAGTATAGTGCTGGTGACTGTGTTTCATAGCCCCAGTCCAGGGCTGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS GCA 90 bp CTGGCCCGCGCGCCTTACCAGCACCGCCCGCTCCGCCGCCGTCGCTaGCATCACGGTGGCCATGGCCGCAGGCCGCCGCCGAGCGCCCTC +
Preference number: 5 (lower is better)
Translates to: LARAPYQHRPLRRRR*HHGGHGRRPPPSAL
Trigger: GAGGGCGCTCGGCGGCGGCCTGCGGCCATGGCCACCGTGATGGCAGCGACGGCGGCGGAGCGGGCGGTGCTGGTAAGGCGCGCGGGCCAG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585653.1
ENST00000590198.1
CDS GCA 90 bp GAAGCGCAGAGAGGCCTCCAGCACCGCCCGCTCCGCCGCCGTCGCTaGCATCACGGTGGCCATGGCCGCAGGCCGCCGCCGAGCGCCCTC +
Preference number: 5 (lower is better)
Translates to: EAQRGLQHRPLRRRR*HHGGHGRRPPPSAL
Trigger: GAGGGCGCTCGGCGGCGGCCTGCGGCCATGGCCACCGTGATGGCAGCGACGGCGGCGGAGCGGGCGGTGCTGGAGGCCTCTCTGCGCTTC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591392.5
CDS CCA 90 bp TGGCGCCTGTCGGTCCGCCTCGGCCCCCGAAACCTGCGGGAGCCCTaGAACCAGACTGGCGGCTGCGGGAGTGAGGCTCGCTCCGCCTGG +
Preference number: 5 (lower is better)
Translates to: WRLSVRLGPRNLREP*NQTGGCGSEARSAW
Trigger: CCAGGCGGAGCGAGCCTCACTCCCGCAGCCGCCAGTCTGGTTCCAGGGCTCCCGCAGGTTTCGGGGGCCGAGGCGGACCGACAGGCGCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585871.1
ENST00000592112.1
CDS GCA 90 bp TCGCGATTGGCTGGCGCCTGTCGGTCCGCCTCGGCCCCCGAAACCTaGGGGAGCCCTGGAACCAGACTGGCGGCTGCGGGAGTGAGGCTC +
Preference number: 5 (lower is better)
Translates to: SRLAGACRSASAPET*GSPGTRLAAAGVRL
Trigger: GAGCCTCACTCCCGCAGCCGCCAGTCTGGTTCCAGGGCTCCCGCAGGTTTCGGGGGCCGAGGCGGACCGACAGGCGCCAGCCAATCGCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585871.1
ENST00000592112.1
CDS TCA 90 bp GGGAGGGCCGCCACGCCCGGCGGGGCAGGGCGCGGGTCGTTACCTTaGGGATGTCCTGCAGCTGCTTCAACACAGCGTGCACCTCGTCGT +
Preference number: 5 (lower is better)
Translates to: GRAATPGGAGRGSLP*GCPAAASTQRAPRR
Trigger: ACGACGAGGTGCACGCTGTGTTGAAGCAGCTGCAGGACATCCTCAAGGTAACGACCCGCGCCCTGCCCCGCCGGGCGTGGCGGCCCTCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592112.1
CDS-3UTR CAA 90 bp CATCCGCGTGAGGCCGCTGGCGGCGATCTCGGGGAGGGTGAGGGTGGCGGGGGTGATCAGAGGGCGGTGTaGGGAATGTGGGACACCCTT +
Preference number: 5 (lower is better)
Translates to: HPREAAGGDLGEGEGGGGDQRAV*GMWDTL
Trigger: AAGGGTGTCCCACATTCCCAACACCGCCCTCTGATC...ACCCCCGCCACCCTCACCCTCCCCGAGATCGCCGCCAGCGGCCTCACGCGGATG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587843.5
CDS GCA 90 bp TCACACTGCCAGGCAGAGGCAGAATTCTTCGGCTCCCAGATTGGATaGCGCTGCTCCCAAGGCGGCCTTCCCCGACCCGAGGCCGGGCGG +
Preference number: 5 (lower is better)
Translates to: SHCQAEAEFFGSQIG*RCSQGGLPRPEAGR
Trigger: CCGCCCGGCCTCGGGTCGGGGAAGGCCGCCTTGGGAGCAGCGGCATCCAATCTGGGAGCCGAAGAATTCTGCCTCTGCCTGGCAGTGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586336.5
ENST00000591292.5
ENST00000592112.1
CDS GCA 90 bp TGCCAGGCAGAGGCAGAATTCTTCGGCTCCCAGATTGGATGCCGCTaGTCCCAAGGCGGCCTTCCCCGACCCGAGGCCGGGCGGGACTCA +
Preference number: 5 (lower is better)
Translates to: CQAEAEFFGSQIGCR*SQGGLPRPEAGRDS
Trigger: TGAGTCCCGCCCGGCCTCGGGTCGGGGAAGGCCGCCTTGGGAGCAGCGGCATCCAATCTGGGAGCCGAAGAATTCTGCCTCTGCCTGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586336.5
ENST00000592112.1
CDS GCA 90 bp CACGCCCGGCGGGGCAGGGCGCGGGTCGTTACCTTGAGGATGTCCTaGAGCTGCTTCAACACAGCGTGCACCTCGTCGTGCAGCAGCCAG +
Preference number: 5 (lower is better)
Translates to: HARRGRARVVTLRMS*SCFNTACTSSCSSQ
Trigger: CTGGCTGCTGCACGACGAGGTGCACGCTGTGTTGAAGCAGCTGCAGGACATCCTCAAGGTAACGACCCGCGCCCTGCCCCGCCGGGCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592112.1
CDS-3UTR CAA 90 bp CAGGCGCTGAGAGCCCCACTCGAACATGGCCCCAGGGCTATGCAGCACCGCGCCACTGCGTCCATCAGCTaGAGGACCTCAGCGCCCGTC +
Preference number: 5 (lower is better)
Translates to: QALRAPLEHGPRAMQHRATASIS*RTSAPV
Trigger: GACGGGCGCTGAGGTCCTCAAGCTGATGGACGCAGT...GGCGCGGTGCTGCATAGCCCTGGGGCCATGTTCGAGTGGGGCTCTCAGCGCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587843.5
CDS-3UTR CAA 90 bp CCCACTCGAACATGGCCCCAGGGCTATGCAGCACCGCGCCCCCAGCTGGGCGGAAATAGCAGCCTGGCGTaGGCACTGGCTGGTGCTCTG +
Preference number: 5 (lower is better)
Translates to: PTRTWPQGYAAPRPQLGGNSSLA*ALAGAL
Trigger: CAGAGCACCAGCCAGTGCCAACGCCAGGCTGCTATT...TCCGCCCAGCTGGGGGCGCGGTGCTGCATAGCCCTGGGGCCATGTTCGAGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
CDS GCA 90 bp CGCCTAGCCCAGGCTCACCCACAGCTGCCTAGGATGAAGTTCTCTTaGTTGGCGGGCCCCTCAGTGCCGGAGCCCGGCAGAGTGAAGCGC +
Preference number: 5 (lower is better)
Translates to: RLAQAHPQLPRMKFS*LAGPSVPEPGRVKR
Trigger: GCGCTTCACTCTGCCGGGCTCCGGCACTGAGGGGCCCGCCAAGCAAGAGAACTTCATCCTAGGCAGCTGTGGGTGAGCCTGGGCTAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585871.1
ENST00000590198.1
ENST00000591292.5
CDS GCA 90 bp CGGCGGGGCAGGGCGCGGGTCGTTACCTTGAGGATGTCCTGCAGCTaGTTCAACACAGCGTGCACCTCGTCGTGCAGCAGCCAGCGGAAC +
Preference number: 5 (lower is better)
Translates to: RRGRARVVTLRMSCS*FNTACTSSCSSQRN
Trigger: GTTCCGCTGGCTGCTGCACGACGAGGTGCACGCTGTGTTGAAGCAGCTGCAGGACATCCTCAAGGTAACGACCCGCGCCCTGCCCCGCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592112.1
CDS-3UTR CAA 90 bp GTTGATGTAGACGTTGACCAGCAGGTCGGACGGCAGGGCAGGGGCGAACATCCGCCGGCAGCAGGGACCTaGAGGACCTCAGCGCCCGTC +
Preference number: 5 (lower is better)
Translates to: VDVDVDQQVGRQGRGEHPPAAGT*RTSAPV
Trigger: GACGGGCGCTGAGGTCCTCAAGGTCCCTGCTGCCGG...CGGATGTTCGCCCCTGCCCTGCCGTCCGACCTGCTGGTCAACGTCTACATCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588201.5
CDS TCA 90 bp TTATATAATGAGGTCGGCTCGAGTTCGCGGAGGCGGGGCCCTGCCTaGAAGCCGCGGCAGCCGCACACTGTAGGCGCTCAGGACGCAGCC +
Preference number: 5 (lower is better)
Translates to: LYNEVGSSSRRRGPA*KPRQPHTVGAQDAA
Trigger: GGCTGCGTCCTGAGCGCCTACAGTGTGCGGCTGCCGCGGCTTTCAGGCAGGGCCCCGCCTCCGCGAACTCGAGCCGACCTCATTATATAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592112.1
CDS CCA 90 bp GAAGTCACACTGCCAGGCAGAGGCAGAATTCTTCGGCTCCCAGATTaGATGCCGCTGCTCCCAAGGCGGCCTTCCCCGACCCGAGGCCGG +
Preference number: 5 (lower is better)
Translates to: EVTLPGRGRILRLPD*MPLLPRRPSPTRGR
Trigger: CCGGCCTCGGGTCGGGGAAGGCCGCCTTGGGAGCAGCGGCATCCAATCTGGGAGCCGAAGAATTCTGCCTCTGCCTGGCAGTGTGACTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586336.5
ENST00000591292.5
ENST00000592112.1
CDS-3UTR CAA 90 bp AGGGTGAGGGTGGCGGGGGTGGTGAGCCGGTTTCGGGCTCTGGTCAGCTGCAGCACGGAGATCTTGTCCTaGAGCTGCTGGCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: RVRVAGVVSRFRALVSCSTEILS*SCWQSC
Trigger: GCAGCTCTGCCAGCAGCTCAAGGACAAGATCTCCGT...GCTGCAGCTGACCAGAGCCCGAAACCGGCTCACCACCCCCGCCACCCTCACCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CAA 90 bp GAGCTGCAGGGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGGGGCGAACATCCGCTaGAGGACCTCAGCGCCCGTC +
Preference number: 5 (lower is better)
Translates to: ELQGDGEVDQGVVEPGDHGANIR*RTSAPV
Trigger: GACGGGCGCTGAGGTCCTCAAGCGGATGTTCGCCCC...GTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586153.1
CDS GCA 90 bp CCCTTCACCTGGTCTGTGCCACAGCTGCCTAGGATGAAGTTCTCTTaGTTGGCGGGCCCCTCAGTGCCGGAGCCCGGCAGAGTGAAGCGC +
Preference number: 5 (lower is better)
Translates to: PFTWSVPQLPRMKFS*LAGPSVPEPGRVKR
Trigger: GCGCTTCACTCTGCCGGGCTCCGGCACTGAGGGGCCCGCCAAGCAAGAGAACTTCATCCTAGGCAGCTGTGGCACAGACCAGGTGAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322048.12
ENST00000585653.1
ENST00000587377.5
ENST00000588201.5
ENST00000589543.5
ENST00000591392.5
CDS GCA 90 bp TTGAGGATGTCCTGCAGCTGCTTCAACACAGCGTGCACCTCGTCGTaGAGCAGCCAGCGGAACTCCTCCTCCTGCGGGACAGACCCGGCG +
Preference number: 5 (lower is better)
Translates to: LRMSCSCFNTACTSS*SSQRNSSSCGTDPA
Trigger: CGCCGGGTCTGTCCCGCAGGAGGAGGAGTTCCGCTGGCTGCTGCACGACGAGGTGCACGCTGTGTTGAAGCAGCTGCAGGACATCCTCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585653.1
ENST00000590198.1
CDS GCA 90 bp GGCGGGACTCAGGCCCTTGCTAGCACCCTCGTCGGGACCCGCCCCTaGCCGCACACAGGTACTTATATAATGAGGTCGGCTCGAGTTCGC +
Preference number: 5 (lower is better)
Translates to: GGTQALASTLVGTRP*PHTGTYIMRSARVR
Trigger: GCGAACTCGAGCCGACCTCATTATATAAGTACCTGTGTGCGGGCAGGGGCGGGTCCCGACGAGGGTGCTAGCAAGGGCCTGAGTCCCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592112.1
CDS-3UTR CAA 90 bp GGATCACGCACTCCACTTTGTGCACGTGGCTCACCTCCAGGCGCTGAGAGCCCCGCTGGGCGGAAGTTCTaGGTGGAGTTGGGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: GSRTPLCARGSPPGAESPAGRKF*VELGCR
Trigger: CCTGCAGCCCAACTCCACCAAGAACTTCCGCCCAGC...GGGGCTCTCAGCGCCTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CAA 90 bp CAGGCGCTGAGAGCCCCACTCGAACATGGCCCCAGGGCTATGCAGCACCGCGCCGAGAACACGGAGATCTaGTCCTTGAGCTGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: QALRAPLEHGPRAMQHRAENTEI*SLSCWQ
Trigger: CTGCCAGCAGCTCAAGGACAAGATCTCCGTGTTCTC...GGCGCGGTGCTGCATAGCCCTGGGGCCATGTTCGAGTGGGGCTCTCAGCGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CAA 90 bp AACATGGCCCCAGGGCTATGCAGCACCGCGCCCCCAGCTGGGCGGAAGTTCTTGAATAGCAGCCTGGCGTaGGCACTGGCTGGTGCTCTG +
Preference number: 5 (lower is better)
Translates to: NMAPGLCSTAPPAGRKFLNSSLA*ALAGAL
Trigger: CAGAGCACCAGCCAGTGCCAACGCCAGGCTGCTATT...CAAGAACTTCCGCCCAGCTGGGGGCGCGGTGCTGCATAGCCCTGGGGCCATGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
CDS GCA 90 bp CGGGGCATCTTCAGGTTCACATCCGCCTGGCTGAGGGCATCCCCCTaGAGAGTCAGCACACCCTTCACCTGGTCTGTGCCACAGCTGCCT +
Preference number: 5 (lower is better)
Translates to: RGIFRFTSAWLRASP*RVSTPFTWSVPQLP
Trigger: AGGCAGCTGTGGCACAGACCAGGTGAAGGGTGTGCTGACTCTGCAGGGGGATGCCCTCAGCCAGGCGGATGTGAACCTGAAGATGCCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000585653.1
ENST00000587377.5
ENST00000589543.5
ENST00000591392.5
CDS GCA 90 bp AGAGAGGCCTCCTTGAGGATGTCCTGCAGCTGCTTCAACACAGCGTaGACCTCGTCGTGCAGCAGCCAGCGGAACTCCTCCTCCTGCGGG +
Preference number: 5 (lower is better)
Translates to: REASLRMSCSCFNTA*TSSCSSQRNSSSCG
Trigger: CCCGCAGGAGGAGGAGTTCCGCTGGCTGCTGCACGACGAGGTGCACGCTGTGTTGAAGCAGCTGCAGGACATCCTCAAGGAGGCCTCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585653.1
ENST00000590198.1
CDS-3UTR CAA 90 bp CAGGGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCGCAGAGAGGCCTCCTaGAGGATGTCCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: QGDGEVDQGVVEPGDHALRREAS*RMSCSC
Trigger: GCAGCTGCAGGACATCCTCAAGGAGGCCTCTCTGCG...GAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CAA 90 bp TGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCGCAGAGAGGCCTCCTaGAGGATGTCCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: CSVVGMSRGRGRLPGDKLRREAS*RMSCSC
Trigger: GCAGCTGCAGGACATCCTCAAGGAGGCCTCTCTGCG...GAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCACAGAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CAA 90 bp CCTGGCGTTGGCACTGGCTGGTGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCAAGTTCTTGGTGGAGTaGGGCTGCAGGGCATGCAGC +
Preference number: 5 (lower is better)
Translates to: PGVGTGWCSVVGMSRGRGKFLVE*GCRACS
Trigger: GCTGCATGCCCTGCAGCCCAACTCCACCAAGAACTT...GCCCCGTCCCCTACTCATACCCACCACAGAGCACCAGCCAGTGCCAACGCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CAA 90 bp CAGGGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCGCTGGGCGGAAGTTCTaGGTGGAGTTGGGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: QGDGEVDQGVVEPGDHALAGRKF*VELGCR
Trigger: CCTGCAGCCCAACTCCACCAAGAACTTCCGCCCAGC...GAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS TCA 90 bp ACCCGCGGTCCTGGGCCACAGCAAGCACTACGCCGGTTACTTCTGTaGGCTGCCTGGCTCATTTATCTACACCCCAGCCTCGCGAAGCGG +
Preference number: 5 (lower is better)
Translates to: TRGPGPQQALRRLLL*AAWLIYLHPSLAKR
Trigger: CCGCTTCGCGAGGCTGGGGTGTAGATAAATGAGCCAGGCAGCTCACAGAAGTAACCGGCGTAGTGCTTGCTGTGGCCCAGGACCGCGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000591292.5
ENST00000592112.1
CDS TCA 90 bp TCCCGCGGTCCTGGGCCACAGCAAGCACTACGCCGGTTACTTCTGTaGGCTGCCTGGCTCATTTATCTACACCCCAGCCTCGCGAAGCGG +
Preference number: 5 (lower is better)
Translates to: SRGPGPQQALRRLLL*AAWLIYLHPSLAKR
Trigger: CCGCTTCGCGAGGCTGGGGTGTAGATAAATGAGCCAGGCAGCTCACAGAAGTAACCGGCGTAGTGCTTGCTGTGGCCCAGGACCGCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586336.5
CDS-3UTR CAA 90 bp GTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTAAGTTCTTGGTGGAGTaGGGCTGCAGGGCATGCAGC +
Preference number: 5 (lower is better)
Translates to: VVGMSRGRGRLPGDKLLGKFLVE*GCRACS
Trigger: GCTGCATGCCCTGCAGCCCAACTCCACCAAGAACTT...ACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CAA 90 bp GTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACGTGGCTGGGCGGAAGTTCTaGGTGGAGTTGGGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: VDQGVVEPGDHALHFVHVAGRKF*VELGCR
Trigger: CCTGCAGCCCAACTCCACCAAGAACTTCCGCCCAGC...CACGTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CAA 90 bp GTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTGCTATCACGCACTCCACTTaGTGCACGTGGCTCACCTCC +
Preference number: 5 (lower is better)
Translates to: VGMSRGRGRLPGDKLLGAITHST*CTWLTS
Trigger: GGAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGAT...AGCACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CAA 90 bp GTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCCTGGGTACGGAGATCTTGTCCTaGAGCTGCTGGCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: VVGMSRGRGRLPGDKLLGTEILS*SCWQSC
Trigger: GCAGCTCTGCCAGCAGCTCAAGGACAAGATCTCCGT...ACCCAGGAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
CDS-3UTR CAA 90 bp GCAGCATCACTGCGTCCATCAGCTGCAGGGAGAGGCGGGGTTGGCTCTGCGTCCGAGAACACGGAGATCTaGTCCTTGAGCTGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: AASLRPSAAGRGGVGSASENTEI*SLSCWQ
Trigger: CTGCCAGCAGCTCAAGGACAAGATCTCCGTGTTCTC...GGACGCAGAGCCAACCCCGCCTCTCCCTGCAGCTGATGGACGCAGTGATGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588201.5
CDS-3UTR CAA 90 bp GAGCTGCAGGGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACAATAGCAGCCTGGCGTaGGCACTGGCTGGTGCTCTG +
Preference number: 5 (lower is better)
Translates to: ELQGDGEVDQGVVEPGDHNSSLA*ALAGAL
Trigger: CAGAGCACCAGCCAGTGCCAACGCCAGGCTGCTATT...GTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CAA 90 bp TGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGCTCAATAGCAGCCTGGCGTaGGCACTGGCTGGTGCTCTG +
Preference number: 5 (lower is better)
Translates to: CSVVGMSRGRGRLPGDKLNSSLA*ALAGAL
Trigger: CAGAGCACCAGCCAGTGCCAACGCCAGGCTGCTATT...GAGCTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCACAGAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
CDS-3UTR CAA 90 bp GTGGCTACTGTTCCCAGGTCCCGAAACCCGGCAGCAGGGACCTTGAGGACCTCACCATGCTCTTCCCCATaGGCAGGATGGGAGGGGACA +
Preference number: 5 (lower is better)
Translates to: VATVPRSRNPAAGTLRTSPCSSP*AGWEGT
Trigger: TGTCCCCTCCCATCCTGCCAATGGGGAAGAGCATGG...TGAGGTCCTCAAGGTCCCTGCTGCCGGGTTTCGGGACCTGGGAACAGTAGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588201.5
CDS-3UTR CAA 90 bp AGGTGGGGTAGGGGGTGGGATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGCGCAGAGAGGCCTCCTaGAGGATGTCCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: RWGRGWDREINSSLALALRREAS*RMSCSC
Trigger: GCAGCTGCAGGACATCCTCAAGGAGGCCTCTCTGCG...CAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATCCCACCCCCTACCCCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CAA 90 bp GGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGCGCAGAGAGGCCTCCTaGAGGATGTCCTGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: GEVDQGVVEPGDHALHFVRREAS*RMSCSC
Trigger: GCAGCTGCAGGACATCCTCAAGGAGGCCTCTCTGCG...CACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CAA 90 bp CAGGGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCAAGTGCAGCAGCTGGTaGTTCCGGGGCATCTTCAGG +
Preference number: 5 (lower is better)
Translates to: QGDGEVDQGVVEPGDHALKCSSW*FRGIFR
Trigger: CCTGAAGATGCCCCGGAACAACCAGCTGCTGCACTT...GAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CAA 90 bp TGGTGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGAAGTGCAGCAGCTGGTaGTTCCGGGGCATCTTCAGG +
Preference number: 5 (lower is better)
Translates to: WCSVVGMSRGRGRLPGDKKCSSW*FRGIFR
Trigger: CCTGAAGATGCCCCGGAACAACCAGCTGCTGCACTT...CTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCACAGAGCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CAA 90 bp GCAGAGCTGCAGGGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATAAGTTCTTGGTGGAGTaGGGCTGCAGGGCATGCAGC +
Preference number: 5 (lower is better)
Translates to: AELQGDGEVDQGVVEPGDKFLVE*GCRACS
Trigger: GCTGCATGCCCTGCAGCCCAACTCCACCAAGAACTT...ATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAGCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CAA 90 bp GAGCTGCAGGGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACATCACGCACTCCACTTaGTGCACGTGGCTCACCTCC +
Preference number: 5 (lower is better)
Translates to: ELQGDGEVDQGVVEPGDHITHST*CTWLTS
Trigger: GGAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGAT...GTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CAA 90 bp GCAGAGCTGCAGGGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATATCACGCACTCCACTTaGTGCACGTGGCTCACCTCC +
Preference number: 5 (lower is better)
Translates to: AELQGDGEVDQGVVEPGDITHST*CTWLTS
Trigger: GGAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGAT...ATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTGCAGCTCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CAA 90 bp TGGTGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGACGGAGATCTTGTCCTaGAGCTGCTGGCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: WCSVVGMSRGRGRLPGDKTEILS*SCWQSC
Trigger: GCAGCTCTGCCAGCAGCTCAAGGACAAGATCTCCGT...CTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCACAGAGCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
CDS-3UTR CAA 90 bp GATTCCCATGGTGATCAGAGGGCGGTGTTGGGAATGTGGGACACCCTTGGCCCCAATAGCAGCCTGGCGTaGGCACTGGCTGGTGCTCTG +
Preference number: 5 (lower is better)
Translates to: DSHGDQRAVLGMWDTLGPNSSLA*ALAGAL
Trigger: CAGAGCACCAGCCAGTGCCAACGCCAGGCTGCTATT...GGGGCCAAGGGTGTCCCACATTCCCAACACCGCCCTCTGATCACCATGGGAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR CAA 90 bp TGGTGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCCGCCTTCCTGGAGACAAGGATCAGAGGGCGGTGTaGGGAATGTGGGACACCCTT +
Preference number: 5 (lower is better)
Translates to: WCSVVGMSRGRGRLPGDKDQRAV*GMWDTL
Trigger: AAGGGTGTCCCACATTCCCAACACCGCCCTCTGATC...CTTGTCTCCAGGAAGGCGGCCCCGTCCCCTACTCATACCCACCACAGAGCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS GCA 90 bp CGGTCCTGGGCCACAGCAAGCACTACGCCGGTTACTTCTGTGAGCTaGCTGGCTCATTTATCTACACCCCAGCCTCGCGAAGCGGGTACT +
Preference number: 5 (lower is better)
Translates to: RSWATASTTPVTSVS*LAHLSTPQPREAGT
Trigger: AGTACCCGCTTCGCGAGGCTGGGGTGTAGATAAATGAGCCAGGCAGCTCACAGAAGTAACCGGCGTAGTGCTTGCTGTGGCCCAGGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586336.5
ENST00000591292.5
ENST00000592112.1
CDS GCA 90 bp GGTGGTTCAGGCCTTGGCCGCTGTATAGGGCAGAGGGTCTCCCAATaGCTTGGCCGTTTGGGGGTTGAACAGGGAGGTCAGGAAACAGGA +
Preference number: 5 (lower is better)
Translates to: GGSGLGRCIGQRVSQ*LGRLGVEQGGQETG
Trigger: TCCTGTTTCCTGACCTCCCTGTTCAACCCCCAAACGGCCAAGGCATTGGGAGACCCTCTGCCCTATACAGCGGCCAAGGCCTGAACCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591292.5
CDS CCA 90 bp ATCAAGGGTCCCGCCCAGAGTCGCAGGGCTTGTACAGAGAGAAAGTaGGAGCTCCCATGCTCTTCCCCATTGGCAGGATGGGAGGGGACA +
Preference number: 5 (lower is better)
Translates to: IKGPAQSRRACTERK*ELPCSSPLAGWEGT
Trigger: TGTCCCCTCCCATCCTGCCAATGGGGAAGAGCATGGGAGCTCCCACTTTCTCTCTGTACAAGCCCTGCGACTCTGGGCGGGACCCTTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000585871.1
ENST00000588201.5
ENST00000591292.5
CDS CCA 90 bp CCCTTAAGCCCAGGGCAGAAATGGGGTGTGTGGTGGTTCAGGCCTTaGCCGCTGTATAGGGCAGAGGGTCTCCCAATGCCTTGGCCGTTT +
Preference number: 5 (lower is better)
Translates to: PLSPGQKWGVWWFRP*PLYRAEGLPMPWPF
Trigger: AAACGGCCAAGGCATTGGGAGACCCTCTGCCCTATACAGCGGCCAAGGCCTGAACCACCACACACCCCATTTCTGCCCTGGGCTTAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591292.5
CDS-3UTR CAA 90 bp AGGTGGGGTAGGGGGTGGGATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGATGAAGTTCTCTTGCTaGGCGGGCCCCTCAGTGCCG +
Preference number: 5 (lower is better)
Translates to: RWGRGWDREINSSLALALMKFSC*AGPSVP
Trigger: CGGCACTGAGGGGCCCGCCAAGCAAGAGAACTTCAT...CAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATCCCACCCCCTACCCCACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CAA 90 bp CCTGGCGTTGGCACTGGCTGGTGCTCTGTGGTGGGTATGAGTAGGGGACGGGGCAAGCAGGTAAATGGCTaGGCTCACATGGTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: PGVGTGWCSVVGMSRGRGKQVNG*AHMVSG
Trigger: GCCAGAAACCATGTGAGCCAAGCCATTTACCTGCTT...GCCCCGTCCCCTACTCATACCCACCACAGAGCACCAGCCAGTGCCAACGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CAA 90 bp TGGGATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGGCTGGTGCTCTGTGGGCTGGGCGGAAGTTCTaGGTGGAGTTGGGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: WDREINSSLALALAGALWAGRKF*VELGCR
Trigger: CCTGCAGCCCAACTCCACCAAGAACTTCCGCCCAGC...CCACAGAGCACCAGCCAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CAA 90 bp CATCACTGCGTCCATCAGCTTGAGGACCTCAGCGCCCGTCTTGAACTGGTAGCTGCTGGGCGGAAGTTCTaGGTGGAGTTGGGCTGCAGG +
Preference number: 5 (lower is better)
Translates to: HHCVHQLEDLSARLELVAAGRKF*VELGCR
Trigger: CCTGCAGCCCAACTCCACCAAGAACTTCCGCCCAGC...AGCTACCAGTTCAAGACGGGCGCTGAGGTCCTCAAGCTGATGGACGCAGTGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587843.5
CDS-3UTR CAA 90 bp GTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACGTGGCTCACCTCCAGACGGAGATCTTGTCCTaGAGCTGCTGGCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: VVEPGDHALHFVHVAHLQTEILS*SCWQSC
Trigger: GCAGCTCTGCCAGCAGCTCAAGGACAAGATCTCCGT...CTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CAA 90 bp CGGAAGTTCTTGGTGGAGTTGGGCTGCAGGGCATGCAGCTGGTACACCGTGAGGACGGAGATCTTGTCCTaGAGCTGCTGGCAGAGCTGC +
Preference number: 5 (lower is better)
Translates to: RKFLVELGCRACSWYTVRTEILS*SCWQSC
Trigger: GCAGCTCTGCCAGCAGCTCAAGGACAAGATCTCCGT...CCTCACGGTGTACCAGCTGCATGCCCTGCAGCCCAACTCCACCAAGAACTTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CAA 90 bp GTGGCTCTGTCTGTGGCGTTCCTCACCATCCCCGGGACTCATAGCTCAGTGCCAGATCAGAGGGCGGTGTaGGGAATGTGGGACACCCTT +
Preference number: 5 (lower is better)
Translates to: VALSVAFLTIPGTHSSVPDQRAV*GMWDTL
Trigger: AAGGGTGTCCCACATTCCCAACACCGCCCTCTGATC...TGGCACTGAGCTATGAGTCCCGGGGATGGTGAGGAACGCCACAGACAGAGCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR CAA 90 bp GGTAAGCAGGTAAATGGCTTGGCTCACATGGTTTCTGGCATCCTGGATCTGCTGCAGGGAGAGGCGGGGTaGGCTCTGCGTCCTCCCGTG +
Preference number: 5 (lower is better)
Translates to: GKQVNGLAHMVSGILDLLQGEAG*ALRPPV
Trigger: CACGGGAGGACGCAGAGCCAACCCCGCCTCTCCCTG...CAGCAGATCCAGGATGCCAGAAACCATGTGAGCCAAGCCATTTACCTGCTTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588201.5
CDS CCA 90 bp GGCAGAGTCAGGGAACAAGGCAGTAGTTATGGTAACCCGCGGTCCTaGGCCACAGCAAGCACTACGCCGGTTACTTCTGTGAGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: GRVREQGSSYGNPRS*ATASTTPVTSVSCL
Trigger: CAGGCAGCTCACAGAAGTAACCGGCGTAGTGCTTGCTGTGGCCCAGGACCGCGGGTTACCATAACTACTGCCTTGTTCCCTGACTCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591292.5
ENST00000592112.1
CDS CCA 90 bp ACTGTGATGTGTGGCCAGCCTAATCCACCAATGCCCATGTTTCACTaGTCCGGACGCCAGGCCAGGCCGTGTGCAAAGAACCCCTCTCCT +
Preference number: 5 (lower is better)
Translates to: TVMCGQPNPPMPMFH*SGRQARPCAKNPSP
Trigger: AGGAGAGGGGTTCTTTGCACACGGCCTGGCCTGGCGTCCGGACCAGTGAAACATGGGCATTGGTGGATTAGGCTGGCCACACATCACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591292.5
CDS-3UTR CAA 90 bp AGGGGGTGGGATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGGCTGGTGCTAAGTGCAGCAGCTGGTaGTTCCGGGGCATCTTCAGG +
Preference number: 5 (lower is better)
Translates to: RGWDREINSSLALALAGAKCSSW*FRGIFR
Trigger: CCTGAAGATGCCCCGGAACAACCAGCTGCTGCACTT...AGCACCAGCCAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATCCCACCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CAA 90 bp GAGCCAGGGGATCACGCACTCCACTTTGTGCACGTGGCTCACCTCCAGGCGCTGAAGCAGGTAAATGGCTaGGCTCACATGGTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: EPGDHALHFVHVAHLQALKQVNG*AHMVSG
Trigger: GCCAGAAACCATGTGAGCCAAGCCATTTACCTGCTT...CAGCGCCTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGATCCCCTGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CAA 90 bp AGGGGGTGGGATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGGCTGGTGCTAAGTTCTTGGTGGAGTaGGGCTGCAGGGCATGCAGC +
Preference number: 5 (lower is better)
Translates to: RGWDREINSSLALALAGAKFLVE*GCRACS
Trigger: GCTGCATGCCCTGCAGCCCAACTCCACCAAGAACTT...AGCACCAGCCAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATCCCACCCCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS GCA 90 bp AAAAGGGAGGCCCAGGGAGGTTCAGTGACTTGGCTGAAGTCACACTaGCAGGCAGAGGCAGAATTCTTCGGCTCCCAGATTGGATGCCGC +
Preference number: 5 (lower is better)
Translates to: KREAQGGSVTWLKSH*QAEAEFFGSQIGCR
Trigger: GCGGCATCCAATCTGGGAGCCGAAGAATTCTGCCTCTGCCTGGCAGTGTGACTTCAGCCAAGTCACTGAACCTCCCTGGGCCTCCCTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586336.5
ENST00000591292.5
ENST00000592112.1
CDS-3UTR CAA 90 bp CAGGGAGACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCAAGCAGGTAAATGGCTaGGCTCACATGGTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: QGDGEVDQGVVEPGDHALKQVNG*AHMVSG
Trigger: GCCAGAAACCATGTGAGCCAAGCCATTTACCTGCTT...GAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTCTCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586153.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CAA 90 bp GATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGGCTGGTGCTCTGTGGTGGATCACGCACTCCACTTaGTGCACGTGGCTCACCTCC +
Preference number: 5 (lower is better)
Translates to: DREINSSLALALAGALWWITHST*CTWLTS
Trigger: GGAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGAT...CCACCACAGAGCACCAGCCAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CAA 90 bp GACGGTGAAGTAGACCAGGGCGTCGTTGAGCCAGGGGATCACGCACTCCACTTTGAGAACACGGAGATCTaGTCCTTGAGCTGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: DGEVDQGVVEPGDHALHFENTEI*SLSCWQ
Trigger: CTGCCAGCAGCTCAAGGACAAGATCTCCGTGTTCTC...AAAGTGGAGTGCGTGATCCCCTGGCTCAACGACGCCCTGGTCTACTTCACCGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CAA 90 bp AGGGGGTGGGATAGGGAGATAAATAGCAGCCTGGCGTTGGCACTGGCTGGTGCTGAGAACACGGAGATCTaGTCCTTGAGCTGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: RGWDREINSSLALALAGAENTEI*SLSCWQ
Trigger: CTGCCAGCAGCTCAAGGACAAGATCTCCGTGTTCTC...AGCACCAGCCAGTGCCAACGCCAGGCTGCTATTTATCTCCCTATCCCACCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000592019.1
CDS-3UTR CAA 90 bp GCAGCAGCTGGTTGTTCCGGGGCATCTTCAGGTTCACATCCGTGTGCAAAGAACAAGTGCAGCAGCTGGTaGTTCCGGGGCATCTTCAGG +
Preference number: 5 (lower is better)
Translates to: AAAGCSGASSGSHPCAKNKCSSW*FRGIFR
Trigger: CCTGAAGATGCCCCGGAACAACCAGCTGCTGCACTT...GTTCTTTGCACACGGATGTGAACCTGAAGATGCCCCGGAACAACCAGCTGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588201.5
CDS-3UTR CAA 90 bp GTCGTTGAGCCAGGGGATCACGCACTCCACTTTGTGCACGTGGCTCACCTCCAGAAGCAGGTAAATGGCTaGGCTCACATGGTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: VVEPGDHALHFVHVAHLQKQVNG*AHMVSG
Trigger: GCCAGAAACCATGTGAGCCAAGCCATTTACCTGCTT...CTGGAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGATCCCCTGGCTCAACGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
CDS-3UTR CAA 90 bp CTTAGACAGCCCTGGACTGGGGCTATGAAACACAGTCACCAGCACTATACTCACACTGCGTCCATCAGCTaGAGGACCTCAGCGCCCGTC +
Preference number: 5 (lower is better)
Translates to: LRQPWTGAMKHSHQHYTHTASIS*RTSAPV
Trigger: GACGGGCGCTGAGGTCCTCAAGCTGATGGACGCAGT...GTGAGTATAGTGCTGGTGACTGTGTTTCATAGCCCCAGTCCAGGGCTGTCTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322048.12
ENST00000587843.5
CDS TCA 90 bp AGGGCACCTAACCGTGAGCCCGATCTCTGCTTATACCACATTCCCTaGACACCTCCTGTGTGCCCGCCTCGGGGAATACAAAACAGACAG +
Preference number: 5 (lower is better)
Translates to: RAPNREPDLCLYHIP*TPPVCPPRGIQNRQ
Trigger: CTGTCTGTTTTGTATTCCCCGAGGCGGGCACACAGGAGGTGTTCAGGGAATGTGGTATAAGCAGAGATCGGGCTCACGGTTAGGTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591292.5
CDS CCA 90 bp CCTTTTGCCAATGAGAAAAGGGAGGCCCAGGGAGGTTCAGTGACTTaGCTGAAGTCACACTGCCAGGCAGAGGCAGAATTCTTCGGCTCC +
Preference number: 5 (lower is better)
Translates to: PFANEKREAQGGSVT*LKSHCQAEAEFFGS
Trigger: GGAGCCGAAGAATTCTGCCTCTGCCTGGCAGTGTGACTTCAGCCAAGTCACTGAACCTCCCTGGGCCTCCCTTTTCTCATTGGCAAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586336.5
ENST00000591292.5
ENST00000592112.1
CDS-3UTR CAA 90 bp TGTCCTGAGTCCAAAGATTCCCATGGTGATCAGAGGGCGGTGTTGGGAATGTGGAAGTTCTTGGTGGAGTaGGGCTGCAGGGCATGCAGC +
Preference number: 5 (lower is better)
Translates to: CPESKDSHGDQRAVLGMWKFLVE*GCRACS
Trigger: GCTGCATGCCCTGCAGCCCAACTCCACCAAGAACTT...CCACATTCCCAACACCGCCCTCTGATCACCATGGGAATCTTTGGACTCAGGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR CAA 90 bp AGACAGCCCTGGACTGGGGCTATGAAACACAGTCACCAGCACTATACTCACTCCATCACGCACTCCACTTaGTGCACGTGGCTCACCTCC +
Preference number: 5 (lower is better)
Translates to: RQPWTGAMKHSHQHYTHSITHST*CTWLTS
Trigger: GGAGGTGAGCCACGTGCACAAAGTGGAGTGCGTGAT...GGAGTGAGTATAGTGCTGGTGACTGTGTTTCATAGCCCCAGTCCAGGGCTGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR CAA 90 bp TATGAAACACAGTCACCAGCACTATACTCACTCCTAGGGTGGCTCTGTCTGTGGAAGTGCAGCAGCTGGTaGTTCCGGGGCATCTTCAGG +
Preference number: 5 (lower is better)
Translates to: YETQSPALYSLLGWLCLWKCSSW*FRGIFR
Trigger: CCTGAAGATGCCCCGGAACAACCAGCTGCTGCACTT...CCACAGACAGAGCCACCCTAGGAGTGAGTATAGTGCTGGTGACTGTGTTTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS-3UTR CAA 90 bp ACAGTCACCAGCACTATACTCACTCCTAGGGTGGCTCTGTCTGTGGCGTTCCTCAAGCAGGTAAATGGCTaGGCTCACATGGTTTCTGGC +
Preference number: 5 (lower is better)
Translates to: TVTSTILTPRVALSVAFLKQVNG*AHMVSG
Trigger: GCCAGAAACCATGTGAGCCAAGCCATTTACCTGCTT...GAGGAACGCCACAGACAGAGCCACCCTAGGAGTGAGTATAGTGCTGGTGACTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS TCA 90 bp AGAGTCGGGTGCAGACTGGAGTTCAGGCATTGGCTGATTCAACTGTaGTGTGTGGCCAGCCTAATCCACCAATGCCCATGTTTCACTGGT +
Preference number: 5 (lower is better)
Translates to: RVGCRLEFRHWLIQL*CVASLIHQCPCFTG
Trigger: ACCAGTGAAACATGGGCATTGGTGGATTAGGCTGGCCACACATCACAGTTGAATCAGCCAATGCCTGAACTCCAGTCTGCACCCGACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591292.5
CDS-3UTR CAA 90 bp TATGAAACACAGTCACCAGCACTATACTCACTCCTAGGGTGGCTCTGTCTGTGGGAGAACACGGAGATCTaGTCCTTGAGCTGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: YETQSPALYSLLGWLCLWENTEI*SLSCWQ
Trigger: CTGCCAGCAGCTCAAGGACAAGATCTCCGTGTTCTC...CCACAGACAGAGCCACCCTAGGAGTGAGTATAGTGCTGGTGACTGTGTTTCATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322048.12
ENST00000587377.5
ENST00000587843.5
CDS GCA 72 bp GCGCCTTACCAGCACCGCCCGCTCCGCCGCCGTCGCTaGCATCACGGTGGCCATGGCCGCAGGCCGCCGCCG +
Preference number: 6 (lower is better)
Translates to: APYQHRPLRRRR*HHGGHGRRPPP
Trigger: CGGCGGCGGCCTGCGGCCATGGCCACCGTGATGGCAGCGACGGCGGCGGAGCGGGCGGTGCTGGTAAGGCGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585653.1
ENST00000590198.1
CDS GCA 72 bp CGGAGCGGGTACCACCCCGCCCCCAGGCCGGCTCCGTaGTCGCGATTGGCTGGCGCCTGTCGGTCCGCCTCG +
Preference number: 6 (lower is better)
Translates to: RSGYHPAPRPAP*SRLAGACRSAS
Trigger: CGAGGCGGACCGACAGGCGCCAGCCAATCGCGAGCACGGAGCCGGCCTGGGGGCGGGGTGGTACCCGCTCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585871.1
ENST00000592112.1
CDS CAA 72 bp CCTTCCCCGACCCGAGGCCGGGCGGGACTCAGGCCCTaGCTAGCACCCTCGTCGGGACCCGCCCCTGCCCGC +
Preference number: 6 (lower is better)
Translates to: PSPTRGRAGLRP*LAPSSGPAPAR
Trigger: GCGGGCAGGGGCGGGTCCCGACGAGGGTGCTAGCAAGGGCCTGAGTCCCGCCCGGCCTCGGGTCGGGGAAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592112.1
CDS TCA 72 bp GCTTGGCGGGCCCCTCAGTGCCGGAGCCCGGCAGAGTaGAGCGCAGAGAGGCCTCCCGCGGTCCTGGGCCAC +
Preference number: 6 (lower is better)
Translates to: AWRAPQCRSPAE*SAERPPAVLGH
Trigger: GTGGCCCAGGACCGCGGGAGGCCTCTCTGCGCTTCACTCTGCCGGGCTCCGGCACTGAGGGGCCCGCCAAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586336.5
CDS TCA 72 bp GCTTGGCGGGCCCCTCAGTGCCGGAGCCCGGCAGAGTaGAGCGCAGAGAGGCCTCCAGCACCGCCCGCTCCG +
Preference number: 6 (lower is better)
Translates to: AWRAPQCRSPAE*SAERPPAPPAP
Trigger: CGGAGCGGGCGGTGCTGGAGGCCTCTCTGCGCTTCACTCTGCCGGGCTCCGGCACTGAGGGGCCCGCCAAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591392.5
CDS GCA 72 bp GCTGGCGCCTGTCGGTCCGCCTCGGCCCCCGAAACCTaGGGGAGCCCTGGAACCAGACTGGCGGCTGCGGGA +
Preference number: 6 (lower is better)
Translates to: AGACRSASAPET*GSPGTRLAAAG
Trigger: TCCCGCAGCCGCCAGTCTGGTTCCAGGGCTCCCGCAGGTTTCGGGGGCCGAGGCGGACCGACAGGCGCCAGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000585871.1
ENST00000592112.1
CDS CAA 90 bp CCAAGGCGGCCTTCCCCGACCCGAGGCCGGGCGGGACTCAGGCCCTaGCTAGCACCCTCGTCGGGACCCGCCCCTGCCCGCACACAGGTA +
Preference number: 6 (lower is better)
Translates to: PRRPSPTRGRAGLRP*LAPSSGPAPARTQV
Trigger: TACCTGTGTGCGGGCAGGGGCGGGTCCCGACGAGGGTGCTAGCAAGGGCCTGAGTCCCGCCCGGCCTCGGGTCGGGGAAGGCCGCCTTGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000592112.1
CDS CCA 72 bp TCGGTCCGCCTCGGCCCCCGAAACCTGCGGGAGCCCTaGAACCAGACTGGCGGCTGCGGGAGTGAGGCTCGC +
Preference number: 6 (lower is better)
Translates to: SVRLGPRNLREP*NQTGGCGSEAR
Trigger: GCGAGCCTCACTCCCGCAGCCGCCAGTCTGGTTCCAGGGCTCCCGCAGGTTTCGGGGGCCGAGGCGGACCGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585871.1
ENST00000592112.1
CDS TCA 72 bp GAGGTCGGCTCGAGTTCGCGGAGGCGGGGCCCTGCCTaGAAGCCGCGGCAGCCGCACACTGTAGGCGCTCAG +
Preference number: 6 (lower is better)
Translates to: EVGSSSRRRGPA*KPRQPHTVGAQ
Trigger: CTGAGCGCCTACAGTGTGCGGCTGCCGCGGCTTTCAGGCAGGGCCCCGCCTCCGCGAACTCGAGCCGACCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592112.1
CDS CAA 90 bp AGGGAGGGCCGCCACGCCCGGCGGGGCAGGGCGCGGGTCGTTACCTaGAGGATGTCCTGCAGCTGCTTCAACACAGCGTGCACCTCGTCG +
Preference number: 6 (lower is better)
Translates to: REGRHARRGRARVVT*RMSCSCFNTACTSS
Trigger: CGACGAGGTGCACGCTGTGTTGAAGCAGCTGCAGGACATCCTCAAGGTAACGACCCGCGCCCTGCCCCGCCGGGCGTGGCGGCCCTCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592112.1
CDS CAA 72 bp CGCCACGCCCGGCGGGGCAGGGCGCGGGTCGTTACCTaGAGGATGTCCTGCAGCTGCTTCAACACAGCGTGC +
Preference number: 6 (lower is better)
Translates to: RHARRGRARVVT*RMSCSCFNTAC
Trigger: GCACGCTGTGTTGAAGCAGCTGCAGGACATCCTCAAGGTAACGACCCGCGCCCTGCCCCGCCGGGCGTGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592112.1
CDS TCA 72 bp GCTTGGCGGGCCCCTCAGTGCCGGAGCCCGGCAGAGTaGAGCGCAGAGAGGCCTCCTGTGGAACAGAGGGAA +
Preference number: 6 (lower is better)
Translates to: AWRAPQCRSPAE*SAERPPVEQRE
Trigger: TTCCCTCTGTTCCACAGGAGGCCTCTCTGCGCTTCACTCTGCCGGGCTCCGGCACTGAGGGGCCCGCCAAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000589543.5
ENST00000591292.5
CDS TCA 72 bp GCCACGCCCGGCGGGGCAGGGCGCGGGTCGTTACCTTaGGGATGTCCTGCAGCTGCTTCAACACAGCGTGCA +
Preference number: 6 (lower is better)
Translates to: ATPGGAGRGSLP*GCPAAASTQRA
Trigger: TGCACGCTGTGTTGAAGCAGCTGCAGGACATCCTCAAGGTAACGACCCGCGCCCTGCCCCGCCGGGCGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592112.1
CDS GCA 72 bp GAGGCAGAATTCTTCGGCTCCCAGATTGGATGCCGCTaGTCCCAAGGCGGCCTTCCCCGACCCGAGGCCGGG +
Preference number: 6 (lower is better)
Translates to: EAEFFGSQIGCR*SQGGLPRPEAG
Trigger: CCCGGCCTCGGGTCGGGGAAGGCCGCCTTGGGAGCAGCGGCATCCAATCTGGGAGCCGAAGAATTCTGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586336.5
ENST00000591292.5
ENST00000592112.1
CDS CCA 72 bp ACAACGTGGCCTGGCCTCACCTGGGTTCAGCTGGGGTaGGAAGACCCTGCCCAAGCCCCCAGGGCACCTAAC +
Preference number: 6 (lower is better)
Translates to: TTWPGLTWVQLG*EDPAQAPRAPN
Trigger: GTTAGGTGCCCTGGGGGCTTGGGCAGGGTCTTCCCACCCCAGCTGAACCCAGGTGAGGCCAGGCCACGTTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591292.5
CDS GCA 72 bp CAGGCTCACCCACAGCTGCCTAGGATGAAGTTCTCTTaGTTGGCGGGCCCCTCAGTGCCGGAGCCCGGCAGA +
Preference number: 6 (lower is better)
Translates to: QAHPQLPRMKFS*LAGPSVPEPGR
Trigger: TCTGCCGGGCTCCGGCACTGAGGGGCCCGCCAAGCAAGAGAACTTCATCCTAGGCAGCTGTGGGTGAGCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585871.1
ENST00000590198.1
ENST00000591292.5
CDS GCA 72 bp CAGGCAGAGGCAGAATTCTTCGGCTCCCAGATTGGATaGCGCTGCTCCCAAGGCGGCCTTCCCCGACCCGAG +
Preference number: 6 (lower is better)
Translates to: QAEAEFFGSQIG*RCSQGGLPRPE
Trigger: CTCGGGTCGGGGAAGGCCGCCTTGGGAGCAGCGGCATCCAATCTGGGAGCCGAAGAATTCTGCCTCTGCCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586336.5
ENST00000591292.5
ENST00000592112.1
CDS GCA 72 bp CGGGGCAGGGCGCGGGTCGTTACCTTGAGGATGTCCTaGAGCTGCTTCAACACAGCGTGCACCTCGTCGTGC +
Preference number: 6 (lower is better)
Translates to: RGRARVVTLRMS*SCFNTACTSSC
Trigger: GCACGACGAGGTGCACGCTGTGTTGAAGCAGCTGCAGGACATCCTCAAGGTAACGACCCGCGCCCTGCCCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592112.1
CDS CCA 72 bp CTGCCAGGCAGAGGCAGAATTCTTCGGCTCCCAGATTaGATGCCGCTGCTCCCAAGGCGGCCTTCCCCGACC +
Preference number: 6 (lower is better)
Translates to: LPGRGRILRLPD*MPLLPRRPSPT
Trigger: GGTCGGGGAAGGCCGCCTTGGGAGCAGCGGCATCCAATCTGGGAGCCGAAGAATTCTGCCTCTGCCTGGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586336.5
ENST00000591292.5
ENST00000592112.1
CDS CAA 72 bp GCTCACCCACAGCTGCCTAGGATGAAGTTCTCTTGCTaGGCGGGCCCCTCAGTGCCGGAGCCCGGCAGAGTG +
Preference number: 6 (lower is better)
Translates to: AHPQLPRMKFSC*AGPSVPEPGRV
Trigger: CACTCTGCCGGGCTCCGGCACTGAGGGGCCCGCCAAGCAAGAGAACTTCATCCTAGGCAGCTGTGGGTGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585871.1
ENST00000590198.1
ENST00000591292.5
CDS CAA 90 bp CTAGCCCAGGCTCACCCACAGCTGCCTAGGATGAAGTTCTCTTGCTaGGCGGGCCCCTCAGTGCCGGAGCCCGGCAGAGTGAAGCGCAGA +
Preference number: 6 (lower is better)
Translates to: LAQAHPQLPRMKFSC*AGPSVPEPGRVKRR
Trigger: TCTGCGCTTCACTCTGCCGGGCTCCGGCACTGAGGGGCCCGCCAAGCAAGAGAACTTCATCCTAGGCAGCTGTGGGTGAGCCTGGGCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585871.1
ENST00000590198.1
ENST00000591292.5
CDS TCA 72 bp CACTCCACTTTGTGCACGTGGCTCACCTCCAGGCGCTaGGAGCCCCACTCGCTTGGTGGAGTTGGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: HSTLCTWLTSRR*EPHSLGGVGLQ
Trigger: CTGCAGCCCAACTCCACCAAGCGAGTGGGGCTCTCAGCGCCTGGAGGTGAGCCACGTGCACAAAGTGGAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586504.5
CDS GCA 72 bp TGGTCTGTGCCACAGCTGCCTAGGATGAAGTTCTCTTaGTTGGCGGGCCCCTCAGTGCCGGAGCCCGGCAGA +
Preference number: 6 (lower is better)
Translates to: WSVPQLPRMKFS*LAGPSVPEPGR
Trigger: TCTGCCGGGCTCCGGCACTGAGGGGCCCGCCAAGCAAGAGAACTTCATCCTAGGCAGCTGTGGCACAGACCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322048.12
ENST00000585653.1
ENST00000587377.5
ENST00000588201.5
ENST00000589543.5
ENST00000591392.5
CDS GCA 72 bp TCCTGCAGCTGCTTCAACACAGCGTGCACCTCGTCGTaGAGCAGCCAGCGGAACTCCTCCTCCTGCGGGACA +
Preference number: 6 (lower is better)
Translates to: SCSCFNTACTSS*SSQRNSSSCGT
Trigger: TGTCCCGCAGGAGGAGGAGTTCCGCTGGCTGCTGCACGACGAGGTGCACGCTGTGTTGAAGCAGCTGCAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000585653.1
ENST00000590198.1
CDS CAA 72 bp TCTGTGCCACAGCTGCCTAGGATGAAGTTCTCTTGCTaGGCGGGCCCCTCAGTGCCGGAGCCCGGCAGAGTG +
Preference number: 6 (lower is better)
Translates to: SVPQLPRMKFSC*AGPSVPEPGRV
Trigger: CACTCTGCCGGGCTCCGGCACTGAGGGGCCCGCCAAGCAAGAGAACTTCATCCTAGGCAGCTGTGGCACAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322048.12
ENST00000585653.1
ENST00000587377.5
ENST00000588201.5
ENST00000589543.5
ENST00000591392.5
CDS CAA 72 bp ACTGCCAGGCAGAGGCAGAATTCTTCGGCTCCCAGATaGGATGCCGCTGCTCCCAAGGCGGCCTTCCCCGAC +
Preference number: 6 (lower is better)
Translates to: TARQRQNSSAPR*DAAAPKAAFPD
Trigger: GTCGGGGAAGGCCGCCTTGGGAGCAGCGGCATCCAATCTGGGAGCCGAAGAATTCTGCCTCTGCCTGGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586336.5
ENST00000591292.5
ENST00000592112.1
CDS CAA 72 bp CACATCCCACAGCTGCCTAGGATGAAGTTCTCTTGCTaGGCGGGCCCCTCAGTGCCGGAGCCCGGCAGAGTG +
Preference number: 6 (lower is better)
Translates to: HIPQLPRMKFSC*AGPSVPEPGRV
Trigger: CACTCTGCCGGGCTCCGGCACTGAGGGGCCCGCCAAGCAAGAGAACTTCATCCTAGGCAGCTGTGGGATGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586336.5
ENST00000587843.5
CDS CAA 90 bp TTCACCTGGTCTGTGCCACAGCTGCCTAGGATGAAGTTCTCTTGCTaGGCGGGCCCCTCAGTGCCGGAGCCCGGCAGAGTGAAGCGCAGA +
Preference number: 6 (lower is better)
Translates to: FTWSVPQLPRMKFSC*AGPSVPEPGRVKRR
Trigger: TCTGCGCTTCACTCTGCCGGGCTCCGGCACTGAGGGGCCCGCCAAGCAAGAGAACTTCATCCTAGGCAGCTGTGGCACAGACCAGGTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322048.12
ENST00000585653.1
ENST00000587377.5
ENST00000588201.5
ENST00000589543.5
ENST00000591392.5
CDS GCA 72 bp GGCCTTGGCCGCTGTATAGGGCAGAGGGTCTCCCAATaGCTTGGCCGTTTGGGGGTTGAACAGGGAGGTCAG +
Preference number: 6 (lower is better)
Translates to: GLGRCIGQRVSQ*LGRLGVEQGGQ
Trigger: CTGACCTCCCTGTTCAACCCCCAAACGGCCAAGGCATTGGGAGACCCTCTGCCCTATACAGCGGCCAAGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591292.5
CDS GCA 72 bp AGCCCCACTCGCTTGGTGGAGTTGGGCTGCAGGGCATaGAGCTGGTACACCGTGAGGCAGAGCTTGTTGAGG +
Preference number: 6 (lower is better)
Translates to: SPTRLVELGCRA*SWYTVRQSLLR
Trigger: CCTCAACAAGCTCTGCCTCACGGTGTACCAGCTGCATGCCCTGCAGCCCAACTCCACCAAGCGAGTGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586504.5
CDS GCA 72 bp GTTCACATCCCACAGCTGCCTAGGATGAAGTTCTCTTaGTTGGCGGGCCCCTCAGTGCCGGAGCCCGGCAGA +
Preference number: 6 (lower is better)
Translates to: VHIPQLPRMKFS*LAGPSVPEPGR
Trigger: TCTGCCGGGCTCCGGCACTGAGGGGCCCGCCAAGCAAGAGAACTTCATCCTAGGCAGCTGTGGGATGTGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586336.5
ENST00000587843.5
CDS GCA 72 bp AGGGCGCGGGTCGTTACCTTGAGGATGTCCTGCAGCTaGTTCAACACAGCGTGCACCTCGTCGTGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: RARVVTLRMSCS*FNTACTSSCSS
Trigger: GCTGCTGCACGACGAGGTGCACGCTGTGTTGAAGCAGCTGCAGGACATCCTCAAGGTAACGACCCGCGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592112.1
CDS GCA 72 bp CAGGCCCTTGCTAGCACCCTCGTCGGGACCCGCCCCTaGCCGCACACAGGTACTTATATAATGAGGTCGGCT +
Preference number: 6 (lower is better)
Translates to: QALASTLVGTRP*PHTGTYIMRSA
Trigger: AGCCGACCTCATTATATAAGTACCTGTGTGCGGGCAGGGGCGGGTCCCGACGAGGGTGCTAGCAAGGGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000592112.1
CDS CAA 90 bp AGCTTCCACTGCTTGTCCTCCCGGAAGGCGAAGTGCAGCAGCTGGTaGTTCCGGGGCATCTTCAGGTTCACATCCGCCTGGCTGAGGGCA +
Preference number: 6 (lower is better)
Translates to: SFHCLSSRKAKCSSW*FRGIFRFTSAWLRA
Trigger: TGCCCTCAGCCAGGCGGATGTGAACCTGAAGATGCCCCGGAACAACCAGCTGCTGCACTTCGCCTTCCGGGAGGACAAGCAGTGGAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322048.12
ENST00000585653.1
ENST00000586504.5
ENST00000587377.5
ENST00000589543.5
ENST00000591392.5
CDS CAA 90 bp CTTCAGGTTCACATCCCACAGCTGCCTAGGATGAAGTTCTCTTGCTaGGCGGGCCCCTCAGTGCCGGAGCCCGGCAGAGTGAAGCGCAGA +
Preference number: 6 (lower is better)
Translates to: LQVHIPQLPRMKFSC*AGPSVPEPGRVKRR
Trigger: TCTGCGCTTCACTCTGCCGGGCTCCGGCACTGAGGGGCCCGCCAAGCAAGAGAACTTCATCCTAGGCAGCTGTGGGATGTGAACCTGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586336.5
ENST00000587843.5
CDS GCA 72 bp TCCTTGAGGATGTCCTGCAGCTGCTTCAACACAGCGTaGACCTCGTCGTGCAGCAGCCAGCGGAACTCCTCC +
Preference number: 6 (lower is better)
Translates to: SLRMSCSCFNTA*TSSCSSQRNSS
Trigger: GGAGGAGTTCCGCTGGCTGCTGCACGACGAGGTGCACGCTGTGTTGAAGCAGCTGCAGGACATCCTCAAGGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000322048.12
ENST00000585653.1
ENST00000585871.1
ENST00000587377.5
ENST00000587843.5
ENST00000588201.5
ENST00000590198.1
CDS GCA 72 bp CCCCCTGCAGAGTCAGCACACCCTTCACCTGGTCTGTaGTGTAACATGTGGCGTCAGAGCGGTGCCTGTGGT +
Preference number: 6 (lower is better)
Translates to: PPAESAHPSPGL*CNMWRQSGACG
Trigger: ACCACAGGCACCGCTCTGACGCCACATGTTACAGCACAGACCAGGTGAAGGGTGTGCTGACTCTGCAGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000585871.1
ENST00000591292.5
CDS GCA 72 bp AGCTTGAGGATGTCCTGCAGCTGCTTCAACACAGCGTaGACCTCGTCGTGCAGCAGCCAGCGGAACTCCTCC +
Preference number: 6 (lower is better)
Translates to: SLRMSCSCFNTA*TSSCSSQRNSS
Trigger: GGAGGAGTTCCGCTGGCTGCTGCACGACGAGGTGCACGCTGTGTTGAAGCAGCTGCAGGACATCCTCAAGCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587711.5
CDS GCA 72 bp ACCTTGAGGATGTCCTGCAGCTGCTTCAACACAGCGTaGACCTCGTCGTGCAGCAGCCAGCGGAACTCCTCC +
Preference number: 6 (lower is better)
Translates to: TLRMSCSCFNTA*TSSCSSQRNSS
Trigger: GGAGGAGTTCCGCTGGCTGCTGCACGACGAGGTGCACGCTGTGTTGAAGCAGCTGCAGGACATCCTCAAGGT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592112.1
CDS CCA 72 bp CCCGCCCAGAGTCGCAGGGCTTGTACAGAGAGAAAGTaGGAGCTCCCATGCTCTTCCCCATTGGCAGGATGG +
Preference number: 6 (lower is better)
Translates to: PAQSRRACTERK*ELPCSSPLAGW
Trigger: CCATCCTGCCAATGGGGAAGAGCATGGGAGCTCCCACTTTCTCTCTGTACAAGCCCTGCGACTCTGGGCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000585871.1
ENST00000588201.5
ENST00000591292.5
CDS CCA 72 bp CCAGGGCAGAAATGGGGTGTGTGGTGGTTCAGGCCTTaGCCGCTGTATAGGGCAGAGGGTCTCCCAATGCCT +
Preference number: 6 (lower is better)
Translates to: PGQKWGVWWFRP*PLYRAEGLPMP
Trigger: AGGCATTGGGAGACCCTCTGCCCTATACAGCGGCCAAGGCCTGAACCACCACACACCCCATTTCTGCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591292.5
CDS CCA 72 bp GAGCCCTTAAGCCCAGGGCAGAAATGGGGTGTGTGGTaGTTCAGGCCTTGGCCGCTGTATAGGGCAGAGGGT +
Preference number: 6 (lower is better)
Translates to: EPLSPGQKWGVW*FRPWPLYRAEG
Trigger: ACCCTCTGCCCTATACAGCGGCCAAGGCCTGAACCACCACACACCCCATTTCTGCCCTGGGCTTAAGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591292.5
CDS CAA 72 bp GGCAGAGGGTCTCCCAATGCCTTGGCCGTTTGGGGGTaGAACAGGGAGGTCAGGAAACAGGAAACCAGGCCC +
Preference number: 6 (lower is better)
Translates to: GRGSPNALAVWG*NREVRKQETRP
Trigger: GGGCCTGGTTTCCTGTTTCCTGACCTCCCTGTTCAACCCCCAAACGGCCAAGGCATTGGGAGACCCTCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591292.5
CDS TCA 72 bp GCAGAGGGTCTCCCAATGCCTTGGCCGTTTGGGGGTTaGACAGGGAGGTCAGGAAACAGGAAACCAGGCCCA +
Preference number: 6 (lower is better)
Translates to: AEGLPMPWPFGG*TGRSGNRKPGP
Trigger: TGGGCCTGGTTTCCTGTTTCCTGACCTCCCTGTTCAACCCCCAAACGGCCAAGGCATTGGGAGACCCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591292.5
CDS GCA 72 bp GAGCCGGTTTCGGGCTCTGGTCAGCTGCAGCATCACTaGGTCCATCAGCTTGAGGATGTCCTGCAGCTGCTT +
Preference number: 6 (lower is better)
Translates to: EPVSGSGQLQHH*VHQLEDVLQLL
Trigger: AAGCAGCTGCAGGACATCCTCAAGCTGATGGACGCAGTGATGCTGCAGCTGACCAGAGCCCGAAACCGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587711.5
CDS CCA 72 bp TGTGGCCAGCCTAATCCACCAATGCCCATGTTTCACTaGTCCGGACGCCAGGCCAGGCCGTGTGCAAAGAAC +
Preference number: 6 (lower is better)
Translates to: CGQPNPPMPMFH*SGRQARPCAKN
Trigger: GTTCTTTGCACACGGCCTGGCCTGGCGTCCGGACCAGTGAAACATGGGCATTGGTGGATTAGGCTGGCCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591292.5
CDS CCA 72 bp TCTGAGCCCTTAAGCCCAGGGCAGAAATGGGGTGTGTaGTGGTTCAGGCCTTGGCCGCTGTATAGGGCAGAG +
Preference number: 6 (lower is better)
Translates to: SEPLSPGQKWGV*WFRPWPLYRAE
Trigger: CTCTGCCCTATACAGCGGCCAAGGCCTGAACCACCACACACCCCATTTCTGCCCTGGGCTTAAGGGCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591292.5
CDS CAA 90 bp CTTGGCCGCTGTATAGGGCAGAGGGTCTCCCAATGCCTTGGCCGTTaGGGGGTTGAACAGGGAGGTCAGGAAACAGGAAACCAGGCCCAA +
Preference number: 6 (lower is better)
Translates to: LGRCIGQRVSQCLGR*GVEQGGQETGNQAQ
Trigger: TTGGGCCTGGTTTCCTGTTTCCTGACCTCCCTGTTCAACCCCCAAACGGCCAAGGCATTGGGAGACCCTCTGCCCTATACAGCGGCCAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591292.5
CDS CAA 90 bp AGCTTCCACTGCTTGTCCTCCCGGAAGGCGAAGTGCAGCAGCTGGTaGTTCCGGGGCATCTTCAGGTTCACATCCCACAGCTGCCTAGGA +
Preference number: 6 (lower is better)
Translates to: SFHCLSSRKAKCSSW*FRGIFRFTSHSCLG
Trigger: TCCTAGGCAGCTGTGGGATGTGAACCTGAAGATGCCCCGGAACAACCAGCTGCTGCACTTCGCCTTCCGGGAGGACAAGCAGTGGAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586336.5
ENST00000587843.5
CDS TCA 72 bp CCTGGGCCACAGCAAGCACTACGCCGGTTACTTCTGTaGGCTGCCTGGCTCATTTATCTACACCCCAGCCTC +
Preference number: 6 (lower is better)
Translates to: PGPQQALRRLLL*AAWLIYLHPSL
Trigger: GAGGCTGGGGTGTAGATAAATGAGCCAGGCAGCTCACAGAAGTAACCGGCGTAGTGCTTGCTGTGGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586336.5
ENST00000591292.5
ENST00000592112.1
CDS CCA 72 bp ACTCGCTTGGTGGAGTTGGGCTGCAGGGCATGCAGCTaGTACACCGTGAGGCAGAGCTTGTTGAGGTTGATG +
Preference number: 6 (lower is better)
Translates to: TRLVELGCRACS*YTVRQSLLRLM
Trigger: CATCAACCTCAACAAGCTCTGCCTCACGGTGTACCAGCTGCATGCCCTGCAGCCCAACTCCACCAAGCGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586504.5
CDS CAA 72 bp CCCCAGCCTCGCGAAGCGGGTACTGTTATCTCCCTTTaGCCAATGAGAAAAGGGAGGCCCAGGGAGGTTCAG +
Preference number: 6 (lower is better)
Translates to: PQPREAGTVISL*PMRKGRPREVQ
Trigger: CTGAACCTCCCTGGGCCTCCCTTTTCTCATTGGCAAAAGGGAGATAACAGTACCCGCTTCGCGAGGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586336.5
ENST00000591292.5
ENST00000592112.1
CDS GCA 72 bp GCCCAGGGAGGTTCAGTGACTTGGCTGAAGTCACACTaGCAGGCAGAGGCAGAATTCTTCGGCTCCCAGATT +
Preference number: 6 (lower is better)
Translates to: AQGGSVTWLKSH*QAEAEFFGSQI
Trigger: AATCTGGGAGCCGAAGAATTCTGCCTCTGCCTGGCAGTGTGACTTCAGCCAAGTCACTGAACCTCCCTGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586336.5
ENST00000591292.5
ENST00000592112.1
CDS GCA 72 bp GCCACAGCAAGCACTACGCCGGTTACTTCTGTGAGCTaGCTGGCTCATTTATCTACACCCCAGCCTCGCGAA +
Preference number: 6 (lower is better)
Translates to: ATASTTPVTSVS*LAHLSTPQPRE
Trigger: TTCGCGAGGCTGGGGTGTAGATAAATGAGCCAGGCAGCTCACAGAAGTAACCGGCGTAGTGCTTGCTGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586336.5
ENST00000591292.5
ENST00000592112.1
CDS CCA 72 bp AGGGAACAAGGCAGTAGTTATGGTAACCCGCGGTCCTaGGCCACAGCAAGCACTACGCCGGTTACTTCTGTG +
Preference number: 6 (lower is better)
Translates to: REQGSSYGNPRS*ATASTTPVTSV
Trigger: CACAGAAGTAACCGGCGTAGTGCTTGCTGTGGCCCAGGACCGCGGGTTACCATAACTACTGCCTTGTTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591292.5
ENST00000592112.1
CDS TCA 72 bp AACCGTGAGCCCGATCTCTGCTTATACCACATTCCCTaGACACCTCCTGTGTGCCCGCCTCGGGGAATACAA +
Preference number: 6 (lower is better)
Translates to: NREPDLCLYHIP*TPPVCPPRGIQ
Trigger: TTGTATTCCCCGAGGCGGGCACACAGGAGGTGTTCAGGGAATGTGGTATAAGCAGAGATCGGGCTCACGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591292.5
CDS TCA 72 bp CTCGCGAAGCGGGTACTGTTATCTCCCTTTTGCCAATaGGAAAAGGGAGGCCCAGGGAGGTTCAGTGACTTG +
Preference number: 6 (lower is better)
Translates to: LAKRVLLSPFCQ*EKGGPGRFSDL
Trigger: CAAGTCACTGAACCTCCCTGGGCCTCCCTTTTCTCATTGGCAAAAGGGAGATAACAGTACCCGCTTCGCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586336.5
ENST00000591292.5
ENST00000592112.1
CDS TCA 72 bp TGCAGACTGGAGTTCAGGCATTGGCTGATTCAACTGTaGTGTGTGGCCAGCCTAATCCACCAATGCCCATGT +
Preference number: 6 (lower is better)
Translates to: CRLEFRHWLIQL*CVASLIHQCPC
Trigger: ACATGGGCATTGGTGGATTAGGCTGGCCACACATCACAGTTGAATCAGCCAATGCCTGAACTCCAGTCTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591292.5
CDS CCA 72 bp GAAACCAGGCCCAAGAAGAGCCACAAAGAAGTGAAATaGAAAGAGGTGAAGAAAGGGGAAGGGGAAGAGGAA +
Preference number: 6 (lower is better)
Translates to: ETRPKKSHKEVK*KEVKKGEGEEE
Trigger: TTCCTCTTCCCCTTCCCCTTTCTTCACCTCTTTCCATTTCACTTCTTTGTGGCTCTTCTTGGGCCTGGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591292.5