Pregenerated sensors for ROCR (Homo sapiens)
Ensembl gene IDs: ENSG00000228639Ensembl transcript IDs: ENST00000412640.6, ENST00000424417.2, ENST00000430908.8, ENST00000540802.2, ENST00000543512.1, ENST00000630770.1, ENST00000674584.1, ENST00000674753.1, ENST00000674854.1, ENST00000675006.1, ENST00000675756.1
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CCCTCGCTGCTGTTAATCTGCAACACGCCACAGCCTCTAGATCGCTaGCGTTCAGAGTCGGATGTCATGGGGGCGACTGGCAGGGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: PSLLLICNTPQPLDR*RSESDVMGATGRGS Trigger: AGAACCCCTGCCAGTCGCCCCCATGACATCCGACTCTGAACGGCAGCGATCTAGAGGCTGTGGCGTGTTGCAGATTAACAGCAGCGAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000430908.8 ENST00000674854.1 ENST00000675756.1 |
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| CDS GCA 90 bp | CTCCTGCGGCATCTGATTTGCCTCCTGCCCTCGCTGCTGTTAATCTaGAACACGCCACAGCCTCTAGATCGCTGCCGTTCAGAGTCGGAT | + |
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Preference number: 5 (lower is better) Translates to: LLRHLICLLPSLLLI*NTPQPLDRCRSESD Trigger: ATCCGACTCTGAACGGCAGCGATCTAGAGGCTGTGGCGTGTTGCAGATTAACAGCAGCGAGGGCAGGAGGCAAATCAGATGCCGCAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000430908.8 ENST00000674854.1 ENST00000675756.1 |
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| CDS TCA 90 bp | GGATGTCATGGGGGCGACTGGCAGGGGTTCTTTCTTCTTTCGGTTTaGTACATCCTTCCTTCCGCTGCTCCTCGCAATCAACCGCTAGGG | + |
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Preference number: 5 (lower is better) Translates to: GCHGGDWQGFFLLSV*YILPSAAPRNQPLG Trigger: CCCTAGCGGTTGATTGCGAGGAGCAGCGGAAGGAAGGATGTATCAAACCGAAAGAAGAAAGAACCCCTGCCAGTCGCCCCCATGACATCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000430908.8 ENST00000675756.1 |
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| CDS GCA 90 bp | GCTCTCAGGGCTAAAGAAAACAGTCAGCTCCTGCGGCATCTGATTTaGCTCCTGCCCTCGCTGCTGTTAATCTGCAACACGCCACAGCCT | + |
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Preference number: 5 (lower is better) Translates to: ALRAKENSQLLRHLI*LLPSLLLICNTPQP Trigger: AGGCTGTGGCGTGTTGCAGATTAACAGCAGCGAGGGCAGGAGGCAAATCAGATGCCGCAGGAGCTGACTGTTTTCTTTAGCCCTGAGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000430908.8 ENST00000674854.1 ENST00000675756.1 |
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| CDS TCA 90 bp | GGATGTCATGGGGGCGACTGGCAGGGGTTCTTTCTTCTTTCGGTTTaGTACATCCTTCCTTCCGCTGCTCCTCGCAATCAACCGTTCCTC | + |
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Preference number: 5 (lower is better) Translates to: GCHGGDWQGFFLLSV*YILPSAAPRNQPFL Trigger: GAGGAACGGTTGATTGCGAGGAGCAGCGGAAGGAAGGATGTATCAAACCGAAAGAAGAAAGAACCCCTGCCAGTCGCCCCCATGACATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000674854.1 |
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| CDS GCA 90 bp | CCTCAGCCCTGCTATGGAGACAGGTCCTTGGTCTCACGGAATCCCTaGAATAGTTGCTGCATTTCTGCATCTTTCTGGCTCATGGTTCCA | + |
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Preference number: 5 (lower is better) Translates to: PQPCYGDRSLVSRNP*NSCCISASFWLMVP Trigger: TGGAACCATGAGCCAGAAAGATGCAGAAATGCAGCAACTATTGCAGGGATTCCGTGAGACCAAGGACCTGTCTCCATAGCAGGGCTGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674584.1 |
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| CDS CCA 90 bp | CATCTTTCTGGCTCATGGTTCCACAGGCTGTACAGGAATCCTGGCTaGGGAGGCCTCAGGAAACTTACAATCATGATGGAAGGTGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: HLSGSWFHRLYRNPG*GGLRKLTIMMEGER Trigger: CCTTTCACCTTCCATCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCAGGATTCCTGTACAGCCTGTGGAACCATGAGCCAGAAAGATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674584.1 |
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| CDS TCA 90 bp | GAGCCTTTGTGTAAAGGAAGACACTGCACAGGAGGTCTTCCAGGCTaGCCTTGTCTGGTGACCATAGTCAAGCTACTGAAGATGGCATCT | + |
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Preference number: 5 (lower is better) Translates to: EPLCKGRHCTGGLPG*PCLVTIVKLLKMAS Trigger: AGATGCCATCTTCAGTAGCTTGACTATGGTCACCAGACAAGGTCAGCCTGGAAGACCTCCTGTGCAGTGTCTTCCTTTACACAAAGGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630770.1 |
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| CDS GCA 90 bp | CCTCAGCCCTGCTATGGAGACAGGTCCTTGGTCTCACGGAATCCCTaGAATAGTTGCTGCATTTCTGCATCTTTCATTTTGATCTGCTGC | + |
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Preference number: 5 (lower is better) Translates to: PQPCYGDRSLVSRNP*NSCCISASFILICC Trigger: GCAGCAGATCAAAATGAAAGATGCAGAAATGCAGCAACTATTGCAGGGATTCCGTGAGACCAAGGACCTGTCTCCATAGCAGGGCTGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000412640.6 |
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| CDS GCA 90 bp | TATGGAGACAGGTCCTTGGTCTCACGGAATCCCTGCAATAGTTGCTaGATTTCTGCATCTTTCTGGCTCATGGTTCCACAGGCTGTACAG | + |
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Preference number: 5 (lower is better) Translates to: YGDRSLVSRNPCNSC*ISASFWLMVPQAVQ Trigger: CTGTACAGCCTGTGGAACCATGAGCCAGAAAGATGCAGAAATGCAGCAACTATTGCAGGGATTCCGTGAGACCAAGGACCTGTCTCCATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674584.1 |
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| CDS GCA 90 bp | TGCTATGGAGACAGGTCCTTGGTCTCACGGAATCCCTGCAATAGTTaGTGCATTTCTGCATCTTTCTGGCTCATGGTTCCACAGGCTGTA | + |
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Preference number: 5 (lower is better) Translates to: CYGDRSLVSRNPCNS*CISASFWLMVPQAV Trigger: TACAGCCTGTGGAACCATGAGCCAGAAAGATGCAGAAATGCAGCAACTATTGCAGGGATTCCGTGAGACCAAGGACCTGTCTCCATAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674584.1 |
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| CDS CCA 90 bp | TTTTTACCTGGCTCATGGTTCCACAGGCTGTACAGGAATCCTGGCTaGGGAGGCCTCAGGAAACTTACAATCATGATGGAAGGTGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: FLPGSWFHRLYRNPG*GGLRKLTIMMEGER Trigger: CCTTTCACCTTCCATCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCAGGATTCCTGTACAGCCTGTGGAACCATGAGCCAGGTAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000412640.6 ENST00000424417.2 ENST00000630770.1 |
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| CDS TCA 90 bp | CCAGGACCTGATGTAATATTGCCACAGACTGATTCCCGTTGCCTTTaGTATGCAACCTGTGCCTACAGTCAGCTCTCAGGGCTAAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: PGPDVILPQTDSRCL*YATCAYSQLSGLKK Trigger: TTTCTTTAGCCCTGAGAGCTGACTGTAGGCACAGGTTGCATATCAAAGGCAACGGGAATCAGTCTGTGGCAATATTACATCAGGTCCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000675756.1 |
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| CDS TCA 90 bp | CTGTCCCCTGATGTAATATTGCCACAGACTGATTCCCGTTGCCTTTaGTATGCAACCTGTGCCTACAGTCAGCTCTCAGGGCTAAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: LSPDVILPQTDSRCL*YATCAYSQLSGLKK Trigger: TTTCTTTAGCCCTGAGAGCTGACTGTAGGCACAGGTTGCATATCAAAGGCAACGGGAATCAGTCTGTGGCAATATTACATCAGGGGACAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000674854.1 |
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| CDS CCA 90 bp | GCCAAACAACCTAGCAATTGTTCTCTCAAATGTCACCTTTCTGTATaGGCCACTGTGCCGATAAAACTCGGCTCTCTCGTTTTCTGCTCC | + |
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Preference number: 5 (lower is better) Translates to: AKQPSNCSLKCHLSV*ATVPIKLGSLVFCS Trigger: GGAGCAGAAAACGAGAGAGCCGAGTTTTATCGGCACAGTGGCCCATACAGAAAGGTGACATTTGAGAGAACAATTGCTAGGTTGTTTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000540802.2 |
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| CDS TCA 90 bp | ATGGTCCCTGATGTAATATTGCCACAGACTGATTCCCGTTGCCTTTaGTATGCAACCTGTGCCTACAGTCAGCTCTCAGGGCTAAAGAAA | + |
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Preference number: 5 (lower is better) Translates to: MVPDVILPQTDSRCL*YATCAYSQLSGLKK Trigger: TTTCTTTAGCCCTGAGAGCTGACTGTAGGCACAGGTTGCATATCAAAGGCAACGGGAATCAGTCTGTGGCAATATTACATCAGGGACCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000430908.8 |
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| CDS TCA 90 bp | GGCATAAATTCTCCAGCTTTAGGGATTGCTGGTATAGTTGACTCTTaGAGCTGCTCTTGGATTTCCAAGGGTAGCACCATTTTTACCTGG | + |
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Preference number: 5 (lower is better) Translates to: GINSPALGIAGIVDS*SCSWISKGSTIFTW Trigger: CCAGGTAAAAATGGTGCTACCCTTGGAAATCCAAGAGCAGCTTCAAGAGTCAACTATACCAGCAATCCCTAAAGCTGGAGAATTTATGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000412640.6 ENST00000424417.2 |
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| CDS TCA 90 bp | GGACCACTTATCTCTTTAATTTTCCTCCATGTTGTGAGGTCTTGCTaGGCGCAGTCTGCAACTTCTGGAGTGATGAAGAGAACAAAAAGC | + |
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Preference number: 5 (lower is better) Translates to: GPLISLIFLHVVRSC*AQSATSGVMKRTKS Trigger: GCTTTTTGTTCTCTTCATCACTCCAGAAGTTGCAGACTGCGCTCAGCAAGACCTCACAACATGGAGGAAAATTAAAGAGATAAGTGGTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000540802.2 ENST00000674584.1 ENST00000675006.1 |
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| CDS CCA 90 bp | GGATTGAGGTTACCAAAGAGGAACTGTGTAATTTCTTTATATAAATaGCTTAACCAGACCTCAAAAAGTCCTGCAATGAACACAGTTCTC | + |
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Preference number: 5 (lower is better) Translates to: GLRLPKRNCVISLYK*LNQTSKSPAMNTVL Trigger: GAGAACTGTGTTCATTGCAGGACTTTTTGAGGTCTGGTTAAGCCATTTATATAAAGAAATTACACAGTTCCTCTTTGGTAACCTCAATCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000540802.2 ENST00000674584.1 |
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| CDS TCA 90 bp | TTTCTTTATATAAATGGCTTAACCAGACCTCAAAAAGTCCTGCAATaGACACAGTTCTCTTTCGGGCTTAATGTTCTCACTTTGCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: FLYINGLTRPQKVLQ*TQFSFGLNVLTLLL Trigger: AAGAAGCAAAGTGAGAACATTAAGCCCGAAAGAGAACTGTGTTCATTGCAGGACTTTTTGAGGTCTGGTTAAGCCATTTATATAAAGAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000540802.2 ENST00000674584.1 |
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| CDS CAA 72 bp | GAACCACCAGTTGCTCCCCTGACCGTGGGTGAGACGTaGATCACTAGGTGGGGACTGGAAAGTCCTGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: EPPVAPLTVGET*ITRWGLESPGL Trigger: GAGCCCAGGACTTTCCAGTCCCCACCTAGTGATCAACGTCTCACCCACGGTCAGGGGAGCAACTGGTGGTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000674753.1 |
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| CDS GCA 72 bp | CTGTTAATCTGCAACACGCCACAGCCTCTAGATCGCTaGCGTTCAGAGTCGGATGTCATGGGGGCGACTGGC | + |
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Preference number: 6 (lower is better) Translates to: LLICNTPQPLDR*RSESDVMGATG Trigger: GCCAGTCGCCCCCATGACATCCGACTCTGAACGGCAGCGATCTAGAGGCTGTGGCGTGTTGCAGATTAACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000430908.8 ENST00000674854.1 ENST00000675756.1 |
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| CDS CAA 90 bp | CGGATGTCATGGGGGCGACTGGCAGGGGTTCTTTCTTCTTTCGGTTaGATACATCCTTCCTTCCGCTGCTCCTCGCAATCAACCGCTAGG | + |
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Preference number: 6 (lower is better) Translates to: RMSWGRLAGVLSSFG*IHPSFRCSSQSTAR Trigger: CCTAGCGGTTGATTGCGAGGAGCAGCGGAAGGAAGGATGTATCAAACCGAAAGAAGAAAGAACCCCTGCCAGTCGCCCCCATGACATCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000430908.8 ENST00000675756.1 |
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| CDS GCA 72 bp | CATCTGATTTGCCTCCTGCCCTCGCTGCTGTTAATCTaGAACACGCCACAGCCTCTAGATCGCTGCCGTTCA | + |
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Preference number: 6 (lower is better) Translates to: HLICLLPSLLLI*NTPQPLDRCRS Trigger: TGAACGGCAGCGATCTAGAGGCTGTGGCGTGTTGCAGATTAACAGCAGCGAGGGCAGGAGGCAAATCAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000430908.8 ENST00000674854.1 ENST00000675756.1 |
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| CDS CAA 90 bp | CGGATGTCATGGGGGCGACTGGCAGGGGTTCTTTCTTCTTTCGGTTaGATACATCCTTCCTTCCGCTGCTCCTCGCAATCAACCGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: RMSWGRLAGVLSSFG*IHPSFRCSSQSTVP Trigger: AGGAACGGTTGATTGCGAGGAGCAGCGGAAGGAAGGATGTATCAAACCGAAAGAAGAAAGAACCCCTGCCAGTCGCCCCCATGACATCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000674854.1 |
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| CDS CAA 72 bp | GAAGCCAGAAAGCACCGGCAGTGGAGTGCAGAAAGCTaGCTCCAGACATTGAATGAGCCCACAGAATACCTC | + |
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Preference number: 6 (lower is better) Translates to: EARKHRQWSAES*LQTLNEPTEYL Trigger: GAGGTATTCTGTGGGCTCATTCAATGTCTGGAGCAAGCTTTCTGCACTCCACTGCCGGTGCTTTCTGGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000540802.2 |
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| CDS TCA 72 bp | ATCCTGGCTGGGGAGGCCTCAGGAAACTTACAATCATaGTGGAAGGTGAAAGGGAAGCAGGCACAATCTGGA | + |
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Preference number: 6 (lower is better) Translates to: ILAGEASGNLQS*WKVKGKQAQSG Trigger: TCCAGATTGTGCCTGCTTCCCTTTCACCTTCCATCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000412640.6 ENST00000424417.2 ENST00000674584.1 |
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| CDS GCA 72 bp | CTTTCTTCTTTCGGTTTGATACATCCTTCCTTCCGCTaGTCCTCGCAATCAACCGCTAGGGGAAGGAGGGAA | + |
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Preference number: 6 (lower is better) Translates to: LSSFGLIHPSFR*SSQSTARGRRE Trigger: TTCCCTCCTTCCCCTAGCGGTTGATTGCGAGGAGCAGCGGAAGGAAGGATGTATCAAACCGAAAGAAGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000430908.8 |
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| CDS GCA 72 bp | CTTTCTTCTTTCGGTTTGATACATCCTTCCTTCCGCTaGTCCTCGCAATCAACCGTTCCTCCTCTTCCTGCC | + |
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Preference number: 6 (lower is better) Translates to: LSSFGLIHPSFR*SSQSTVPPLPA Trigger: GGCAGGAAGAGGAGGAACGGTTGATTGCGAGGAGCAGCGGAAGGAAGGATGTATCAAACCGAAAGAAGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674854.1 |
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| CDS TCA 72 bp | GGGAGGCCTCAGGAAACTTACAATCATGATGGAAGGTaGAAGGGAAGCAGGCACAATCTTCACATGGCACAG | + |
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Preference number: 6 (lower is better) Translates to: GRPQETYNHDGR*KGSRHNLHMAQ Trigger: CTGTGCCATGTGAAGATTGTGCCTGCTTCCCTTTCACCTTCCATCATGATTGTAAGTTTCCTGAGGCCTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630770.1 |
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| CDS TCA 72 bp | ATCCTGGCTGGGGAGGCCTCAGGAAACTTACAATCATaGTGGAAGGTGAAAGGGAAGCAGGCACAATCTTCA | + |
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Preference number: 6 (lower is better) Translates to: ILAGEASGNLQS*WKVKGKQAQSS Trigger: TGAAGATTGTGCCTGCTTCCCTTTCACCTTCCATCATGATTGTAAGTTTCCTGAGGCCTCCCCAGCCAGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000630770.1 |
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| CDS GCA 72 bp | CACACTCACTATCACAAGAACAGCAAGGGAAAAGTCTaGCCCCGTAATCCAATCACCTCTCACTGGATCCCT | + |
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Preference number: 6 (lower is better) Translates to: HTHYHKNSKGKV*PRNPITSHWIP Trigger: AGGGATCCAGTGAGAGGTGATTGGATTACGGGGGCAGACTTTTCCCTTGCTGTTCTTGTGATAGTGAGTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000630770.1 |
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| CDS GCA 72 bp | GACAGGTCCTTGGTCTCACGGAATCCCTGCAATAGTTaGTGCATTTCTGCATCTTTCTGGCTCATGGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: DRSLVSRNPCNS*CISASFWLMVP Trigger: TGGAACCATGAGCCAGAAAGATGCAGAAATGCAGCAACTATTGCAGGGATTCCGTGAGACCAAGGACCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674584.1 |
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| CDS TCA 72 bp | GATGTAATATTGCCACAGACTGATTCCCGTTGCCTTTaGTATGCAACCTGTGCCTACAGTCAGCTCTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: DVILPQTDSRCL*YATCAYSQLSG Trigger: CCCTGAGAGCTGACTGTAGGCACAGGTTGCATATCAAAGGCAACGGGAATCAGTCTGTGGCAATATTACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000430908.8 ENST00000674854.1 ENST00000675756.1 |
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| CDS CAA 90 bp | GCCAGAAAGCACCGGCAGTGGAGTGCAGAAAGCTTGCTCCAGACATaGAATGAGCCCACAGAATACCTCAATCTGATCTTTTATAGTGCT | + |
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Preference number: 6 (lower is better) Translates to: ARKHRQWSAESLLQT*NEPTEYLNLIFYSA Trigger: AGCACTATAAAAGATCAGATTGAGGTATTCTGTGGGCTCATTCAATGTCTGGAGCAAGCTTTCTGCACTCCACTGCCGGTGCTTTCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540802.2 |
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| CDS CAA 90 bp | GACCAATACCCAACTACACACCCAACTTCAGACCCACAGGAGGACTaGATTTCCACTATAGGCTGTAATGACACAGTGCTAACCAAGAGG | + |
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Preference number: 6 (lower is better) Translates to: DQYPTTHPTSDPQED*ISTIGCNDTVLTKR Trigger: CCTCTTGGTTAGCACTGTGTCATTACAGCCTATAGTGGAAATCAAGTCCTCCTGTGGGTCTGAAGTTGGGTGTGTAGTTGGGTATTGGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630770.1 |
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| CDS CAA 90 bp | GCAGATCCAATGACACCTACCACACAGAGTTGTTGTGAATGCAGGTaGATAGACATAAGGTACACAGCATTACGTGACTGTCGAGTGCCT | + |
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Preference number: 6 (lower is better) Translates to: ADPMTPTTQSCCECR*IDIRYTALRDCRVP Trigger: AGGCACTCGACAGTCACGTAATGCTGTGTACCTTATGTCTATCAACCTGCATTCACAACAACTCTGTGTGGTAGGTGTCATTGGATCTGC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630770.1 |
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| CDS TCA 72 bp | AGGGAAGCAGGCACAATCTGGATCTGGCATGAGGCTTaGCCAAGTCAGGTAAAACTCCAAAATCCAAATGAG | + |
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Preference number: 6 (lower is better) Translates to: REAGTIWIWHEA*PSQVKLQNPNE Trigger: CTCATTTGGATTTTGGAGTTTTACCTGACTTGGTCAAGCCTCATGCCAGATCCAGATTGTGCCTGCTTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000412640.6 ENST00000424417.2 ENST00000674584.1 |
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| CDS GCA 72 bp | TTTCCTCCATGTTGTGAGGTCTTGCTGAGCGCAGTCTaGAACTTCTGGAGTGATGAAGAGAACAAAAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: FPPCCEVLLSAV*NFWSDEENKKL Trigger: CAGCTTTTTGTTCTCTTCATCACTCCAGAAGTTGCAGACTGCGCTCAGCAAGACCTCACAACATGGAGGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000540802.2 ENST00000674584.1 ENST00000675006.1 |
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| CDS GCA 72 bp | CAAGGTCCAGTCATTTCCCTCAAGCTGGGCTTCTATTaGTCTCTCTGGAGATTCAGCATAAACATGTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: QGPVISLKLGFY*SLWRFSINMSL Trigger: CAAGGACATGTTTATGCTGAATCTCCAGAGAGAGCAATAGAAGCCCAGCTTGAGGGAAATGACTGGACCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000674854.1 |
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| CDS CCA 72 bp | CCTAGCAATTGTTCTCTCAAATGTCACCTTTCTGTATaGGCCACTGTGCCGATAAAACTCGGCTCTCTCGTT | + |
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Preference number: 6 (lower is better) Translates to: PSNCSLKCHLSV*ATVPIKLGSLV Trigger: AACGAGAGAGCCGAGTTTTATCGGCACAGTGGCCCATACAGAAAGGTGACATTTGAGAGAACAATTGCTAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540802.2 |
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| CDS CAA 72 bp | CCAACTACACACCCAACTTCAGACCCACAGGAGGACTaGATTTCCACTATAGGCTGTAATGACACAGTGCTA | + |
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Preference number: 6 (lower is better) Translates to: PTTHPTSDPQED*ISTIGCNDTVL Trigger: TAGCACTGTGTCATTACAGCCTATAGTGGAAATCAAGTCCTCCTGTGGGTCTGAAGTTGGGTGTGTAGTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630770.1 |
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| CDS TCA 72 bp | TCTCCAGCTTTAGGGATTGCTGGTATAGTTGACTCTTaGAGCTGCTCTTGGATTTCCAAGGGTAGCACCATT | + |
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Preference number: 6 (lower is better) Translates to: SPALGIAGIVDS*SCSWISKGSTI Trigger: AATGGTGCTACCCTTGGAAATCCAAGAGCAGCTTCAAGAGTCAACTATACCAGCAATCCCTAAAGCTGGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000412640.6 ENST00000424417.2 |
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| CDS TCA 72 bp | AAGCTACTGAAGATGGCATCTGTACAGCAGATCCAATaGCACCTACCACACAGAGTTGTTGTGAATGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: KLLKMASVQQIQ*HLPHRVVVNAG Trigger: ACCTGCATTCACAACAACTCTGTGTGGTAGGTGTCATTGGATCTGCTGTACAGATGCCATCTTCAGTAGCTT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630770.1 |
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| CDS CCA 72 bp | TCCCTGGATTGTGCACAAAATTATGCCAATTTATGGTaGGGTAAGGGGATACTCCATGGACCACTTATCTCT | + |
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Preference number: 6 (lower is better) Translates to: SLDCAQNYANLW*GKGILHGPLIS Trigger: AGAGATAAGTGGTCCATGGAGTATCCCCTTACCCCACCATAAATTGGCATAATTTTGTGCACAATCCAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000540802.2 ENST00000543512.1 ENST00000674584.1 ENST00000675006.1 |
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| CDS TCA 72 bp | AGCAGATCCAATGACACCTACCACACAGAGTTGTTGTaGATGCAGGTTGATAGACATAAGGTACACAGCATT | + |
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Preference number: 6 (lower is better) Translates to: SRSNDTYHTELL*MQVDRHKVHSI Trigger: AATGCTGTGTACCTTATGTCTATCAACCTGCATTCACAACAACTCTGTGTGGTAGGTGTCATTGGATCTGCT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630770.1 |
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| CDS GCA 72 bp | GATCCAATGACACCTACCACACAGAGTTGTTGTGAATaGAGGTTGATAGACATAAGGTACACAGCATTACGT | + |
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Preference number: 6 (lower is better) Translates to: DPMTPTTQSCCE*RLIDIRYTALR Trigger: ACGTAATGCTGTGTACCTTATGTCTATCAACCTGCATTCACAACAACTCTGTGTGGTAGGTGTCATTGGATC 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000630770.1 |
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| CDS CAA 72 bp | GTAGTTCAAATAGGCTGGTCATACAGCAGCACGCATTaGACTGTATTCCAAAACATGTGTCTTAAAAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: VVQIGWSYSSTH*TVFQNMCLKRL Trigger: GAGCCTTTTAAGACACATGTTTTGGAATACAGTCAAATGCGTGCTGCTGTATGACCAGCCTATTTGAACTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENST00000430908.8 ENST00000540802.2 ENST00000674584.1 ENST00000674753.1 ENST00000674854.1 ENST00000675756.1 |
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| CDS TCA 72 bp | ATAAATGGCTTAACCAGACCTCAAAAAGTCCTGCAATaGACACAGTTCTCTTTCGGGCTTAATGTTCTCACT | + |
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Preference number: 6 (lower is better) Translates to: INGLTRPQKVLQ*TQFSFGLNVLT Trigger: AGTGAGAACATTAAGCCCGAAAGAGAACTGTGTTCATTGCAGGACTTTTTGAGGTCTGGTTAAGCCATTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000540802.2 ENST00000674584.1 |
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| CDS CAA 72 bp | CATAATCAAATAGGCTGGTCATACAGCAGCACGCATTaGACTGTATTCCAAAACATGTGTCTTAAAAGGCTC | + |
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Preference number: 6 (lower is better) Translates to: HNQIGWSYSSTH*TVFQNMCLKRL Trigger: GAGCCTTTTAAGACACATGTTTTGGAATACAGTCAAATGCGTGCTGCTGTATGACCAGCCTATTTGATTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000675006.1 |
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| CDS CAA 90 bp | AAACCATCTGACTCCCCTTTGAAATCCTCTTGTTTCCTCCTGAGATaGTCTAATTATAGAGTAATGCTGGAAGTATTCTTCACTTGCAGA | + |
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Preference number: 6 (lower is better) Translates to: KPSDSPLKSSCFLLR*SNYRVMLEVFFTCR Trigger: TCTGCAAGTGAAGAATACTTCCAGCATTACTCTATAATTAGACAATCTCAGGAGGAAACAAGAGGATTTCAAAGGGGAGTCAGATGGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000430908.8 ENST00000540802.2 ENST00000674584.1 ENST00000674753.1 ENST00000674854.1 ENST00000675756.1 |
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| CDS GCA 72 bp | TTCCAGACTAAAGCTGCAACTAGATGGAAAAATGCATaGTCAAGATTAAAGTTCTGCTATTTTGGAGCCTTT | + |
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Preference number: 6 (lower is better) Translates to: FQTKAATRWKNA*SRLKFCYFGAF Trigger: AAAGGCTCCAAAATAGCAGAACTTTAATCTTGAGCATGCATTTTTCCATCTAGTTGCAGCTTTAGTCTGGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000630770.1 |
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| CDS CAA 72 bp | CCCACAGAATACCTCAATCTGATCTTTTATAGTGCTTaGTTTATTACCTGTGTGCCCTTATTTCATAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: PTEYLNLIFYSA*FITCVPLFHKG Trigger: TCCCTTATGAAATAAGGGCACACAGGTAATAAACAAAGCACTATAAAAGATCAGATTGAGGTATTCTGTGGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540802.2 |
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| CDS CAA 90 bp | TTGAATGAGCCCACAGAATACCTCAATCTGATCTTTTATAGTGCTTaGTTTATTACCTGTGTGCCCTTATTTCATAAGGGAACTGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: LNEPTEYLNLIFYSA*FITCVPLFHKGTEK Trigger: TTTCTCAGTTCCCTTATGAAATAAGGGCACACAGGTAATAAACAAAGCACTATAAAAGATCAGATTGAGGTATTCTGTGGGCTCATTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000540802.2 |
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