RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ROBO3 (Homo sapiens)

Ensembl gene IDs: ENSG00000154134

Ensembl transcript IDs: ENST00000397801.6, ENST00000524971.1, ENST00000525304.5, ENST00000525448.5, ENST00000525482.5, ENST00000526551.5, ENST00000527196.5, ENST00000527245.5, ENST00000528068.5, ENST00000528144.5, ENST00000528820.5, ENST00000529658.5, ENST00000531075.5, ENST00000531545.5, ENST00000531888.1, ENST00000532472.1, ENST00000534598.5, ENST00000538940.5, ENST00000543966.5

Found 610 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTTCCCCGTGGCACTCATaGTATTCTCAATGCCCCAAC +
Preference number: 2 (lower is better)
Translates to: QPIEIVETNGLQLAPLITSPWHS*YSQCPN
Trigger: GTTGGGGCATTGAGAATATCATGAGTGCCACGGGGA...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
3UTR-3UTR TCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATTCCCCGTGGCACTCATaGTATTCTCAATGCCCCAAC +
Preference number: 2 (lower is better)
Translates to: KGGASSLPSQPIEIVETNSPWHS*YSQCPN
Trigger: GTTGGGGCATTGAGAATATCATGAGTGCCACGGGGA...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCCTGCGGCAGCCACGGTaGCGCTCTCCTGCCGGTGCG +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETLRQPR*RSPAGA
Trigger: CGCACCGGCAGGAGAGCGGCACCGTGGCTGCCGCAG...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397801.6
CDS-3UTR GCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCGGCAGCAGCAGGCGGTaGGCACGCGGATCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFGSSRR*ARGSSR
Trigger: GCGGGAGGATCCGCGTGCGCACCGCCTGCTGCTGCC...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCCGCGCGCGGCGCCCGTaGACGATGCGCGGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFRARRP*TMRGKK
Trigger: CTTCTTCCCGCGCATCGTGCACGGGCGCCGCGCGCG...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCCGCCAGGGGCGGCCGTaGCCCTGGCCGTCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFRQGRP*PWPSEL
Trigger: TAGCTCAGACGGCCAGGGGCACGGCCGCCCCTGGCG...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCCGCCAGGGGCGGCCGTaGCCCTGGCCGTCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETRQGRP*PWPSEL
Trigger: TAGCTCAGACGGCCAGGGGCACGGCCGCCCCTGGCG...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTGAGCACCCGCTGGGCTaGCAGGGGCACGGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITEHPLG*QGHGLD
Trigger: GTCCAGGCCGTGCCCCTGGCAGCCCAGCGGGTGCTC...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCGAGCACCCGCTGGGCTaGCAGGGGCACGGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFEHPLG*QGHGLD
Trigger: GTCCAGGCCGTGCCCCTGGCAGCCCAGCGGGTGCTC...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCCCACGCCTGCGCTGGTaGCCGCCGCGACCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFPRLRW*PPRPGF
Trigger: GAACCCTGGTCGCGGCGGCCACCAGCGCAGGCGTGG...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTCCAGCACTGGGGCACTaGGCACGCCCACGCCTGCGC +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITPALGH*ARPRLR
Trigger: GCGCAGGCGTGGGCGTGCCCAGTGCCCCAGTGCTGG...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCGGGCAGGACTGGGGCTaGGGTGGGGTGAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFGQDWG*GGVRLQ
Trigger: CTGCAGCCTCACCCCACCTCAGCCCCAGTCCTGCCC...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR TCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCGGGCAGGACTGGGGCTaGGGTGGGGTGAGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSGQDWG*GGVRLQ
Trigger: CTGCAGCCTCACCCCACCTCAGCCCCAGTCCTGCCC...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCACAGCCTCTGCGCGCTaGGGCAGCCACGGTGCCGCT +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFTASAR*GSHGAA
Trigger: AGCGGCACCGTGGCTGCCGCAGCGCGCAGAGGCTGT...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397801.6
CDS-3UTR GCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGGCAGCAGCAGGCGGTaGGCACGCGGATCCTCCCGC +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLGSSRR*ARGSSR
Trigger: GCGGGAGGATCCGCGTGCGCACCGCCTGCTGCTGCC...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTGGCGCCCGTGCACGATaGGCGGGAAGAAGAGGGCGC +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITGARAR*AGRRGR
Trigger: GCGCCCTCTTCTTCCCGCGCATCGTGCACGGGCGCC...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAACGCGCGCGGCGCCCGTaGACGATGCGCGGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVERARRP*TMRGKK
Trigger: CTTCTTCCCGCGCATCGTGCACGGGCGCCGCGCGCG...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCGGCGGGGACGGCAGCTaGACCAGCACTGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETGGDGS*TSTGAL
Trigger: CAGTGCCCCAGTGCTGGTGCAGCTGCCGTCCCCGCC...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTGGCGGGGACGGCAGCTaGACCAGCACTGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITGGDGS*TSTGAL
Trigger: CAGTGCCCCAGTGCTGGTGCAGCTGCCGTCCCCGCC...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGCGCCAGGGGCGGCCGTaGCCCTGGCCGTCTGAGCTA +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWRQGRP*PWPSEL
Trigger: TAGCTCAGACGGCCAGGGGCACGGCCGCCCCTGGCG...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGAGCACCCGCTGGGCTaGCAGGGGCACGGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLEHPLG*QGHGLD
Trigger: GTCCAGGCCGTGCCCCTGGCAGCCCAGCGGGTGCTC...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATCGCGGCAGGGCAACGTaGCGGGCTCGCCTCGGGAGA +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNRGRAT*RARLGR
Trigger: TCTCCCGAGGCGAGCCCGCCACGTTGCCCTGCCGCG...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGAAGAGGGCGCCGCTaGGCAGCAGCAGGCGGTGCG +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFRRGRR*AAAGGA
Trigger: CGCACCGCCTGCTGCTGCCCAGCGGCGCCCTCTTCT...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGCCACGCCTGCGCTGGTaGCCGCCGCGACCAGGGTTC +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWPRLRW*PPRPGF
Trigger: GAACCCTGGTCGCGGCGGCCACCAGCGCAGGCGTGG...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATCCAGCACTGGGGCACTaGGCACGCCCACGCCTGCGC +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNPALGH*ARPRLR
Trigger: GCGCAGGCGTGGGCGTGCCCAGTGCCCCAGTGCTGG...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTGGCAGCAGCTTCCCCTaGGTTCCTGGGCCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITGSSFP*VPGPRG
Trigger: GCCCCTCGGCCCAGGAACCCAGGGGAAGCTGCTGCC...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCGGCAGCAGCTTCCCCTaGGTTCCTGGGCCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSGSSFP*VPGPRG
Trigger: GCCCCTCGGCCCAGGAACCCAGGGGAAGCTGCTGCC...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCGGCAGCAGCTTCCCCTaGGTTCCTGGGCCGAGGGGC +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFGSSFP*VPGPRG
Trigger: GCCCCTCGGCCCAGGAACCCAGGGGAAGCTGCTGCC...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR TCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCCCCTTCGGGATGGGGTaGCCAGGCACCCTCCACTGG +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFPFGMG*PGTLHW
Trigger: CCAGTGGAGGGTGCCTGGTCACCCCATCCCGAAGGG...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAGGCGCCCGTGCACGATaGGCGGGAAGAAGAGGGCGC +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVEGARAR*AGRRGR
Trigger: GCGCCCTCTTCTTCCCGCGCATCGTGCACGGGCGCC...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTCCCCCATGGAAGGTCTaGAGCTCCTCCCCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITPPWKV*SSSPAG
Trigger: CCCAGCGGGGGAGGAGCTGCAGACCTTCCATGGGGG...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCGGAGGCAGCAGGGTGTaGTTGAGCGCCGCCAGCGAG +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFGGSRV*LSAASE
Trigger: CTCGCTGGCGGCGCTCAACCACACCCTGCTGCCTCC...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397801.6
CDS-3UTR CCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAAGAAGAGGGCGCCGCTaGGCAGCAGCAGGCGGTGCG +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVERRGRR*AAAGGA
Trigger: CGCACCGCCTGCTGCTGCCCAGCGGCGCCCTCTTCT...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCGCCCCCAGCCCCTCCTaGCCTTGGGCTTGCACCTTG +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFAPSPS*PWACTL
Trigger: CAAGGTGCAAGCCCAAGGCCAGGAGGGGCTGGGGGC...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCGCCCCCAGCCCCTCCTaGCCTTGGGCTTGCACCTTG +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETAPSPS*PWACTL
Trigger: CAAGGTGCAAGCCCAAGGCCAGGAGGGGCTGGGGGC...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCCAGCTGCACCAGCACTaGGGCACTGGGCACGCCCAC +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETQLHQH*GTGHAH
Trigger: GTGGGCGTGCCCAGTGCCCCAGTGCTGGTGCAGCTG...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCCAGCTGCACCAGCACTaGGGCACTGGGCACGCCCAC +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFQLHQH*GTGHAH
Trigger: GTGGGCGTGCCCAGTGCCCCAGTGCTGGTGCAGCTG...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCCGGGGCCAAGGCCCATaGGTGGCCTGGAACTGGCTC +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSRGQGP*VAWNWL
Trigger: GAGCCAGTTCCAGGCCACCCATGGGCCTTGGCCCCG...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTGGCGGTGGCAAGGGTaGTGGGGGCAAGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSWRWQG*WGQVPR
Trigger: CCTGGGGACTTGCCCCCACCACCCTTGCCACCGCCA...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCTGGCGGTGGCAAGGGTaGTGGGGGCAAGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFWRWQG*WGQVPR
Trigger: CCTGGGGACTTGCCCCCACCACCCTTGCCACCGCCA...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCGCCAGGGGCACGGCCTaGACCGCTTTCCTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSARGTA*TAFLSP
Trigger: TGGGGAGAGGAAAGCGGTCCAGGCCGTGCCCCTGGC...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTGCCAGGGGCACGGCCTaGACCGCTTTCCTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITARGTA*TAFLSP
Trigger: TGGGGAGAGGAAAGCGGTCCAGGCCGTGCCCCTGGC...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR TCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAGCAGCAGGGTGTGGTTaGGCGCCGCCAGCGAGGAGT +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVEAAGCG*APPARS
Trigger: ACTCCTCGCTGGCGGCGCTCAACCACACCCTGCTGC...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397801.6
CDS-3UTR TCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCGCCTCTTGGAGACACTaGGAAGCGCCCCGTCGGCTG +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFASWRH*EAPRRL
Trigger: CAGCCGACGGGGCGCTTCTCAGTGTCTCCAAGAGGC...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCGCCTCTTGGAGACACTaGGAAGCGCCCCGTCGGCTG +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSASWRH*EAPRRL
Trigger: CAGCCGACGGGGCGCTTCTCAGTGTCTCCAAGAGGC...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTACCCTTCGGGATGGGGTaGCCAGGCACCCTCCACTGG +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLPFGMG*PGTLHW
Trigger: CCAGTGGAGGGTGCCTGGTCACCCCATCCCGAAGGG...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR TCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATCCCTTCGGGATGGGGTaGCCAGGCACCCTCCACTGG +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNPFGMG*PGTLHW
Trigger: CCAGTGGAGGGTGCCTGGTCACCCCATCCCGAAGGG...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR TCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCCTGAGGGAGAGCAGGTaGGCGTTGGGGACGGAGAGC +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFLRESR*ALGTES
Trigger: GCTCTCCGTCCCCAACGCTCACCTGCTCTCCCTCAG...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543966.5
CDS-3UTR TCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTACTCCGGTCCTACCCTTaGCCCTGGGGACAGGGGGTG +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLLRSYP*PWGQGV
Trigger: CACCCCCTGTCCCCAGGGTCAAGGGTAGGACCGGAG...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538940.5
CDS-3UTR GCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCACAGTCCAGGACACCTaGAGGGTCCGGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSTVQDT*RVRGPR
Trigger: CCTGGGACCCCGGACCCTGCAGGTGTCCTGGACTGT...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCCAGTCCTCGGAGCATTaGGGAGCGTGCCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETQSSEH*GACPAC
Trigger: GCAGGCTGGGCACGCTCCGCAATGCTCCGAGGACTG...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAACCCCCATGGAAGGTCTaGAGCTCCTCCCCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVEPPWKV*SSSPAG
Trigger: CCCAGCGGGGGAGGAGCTGCAGACCTTCCATGGGGG...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTACCCCCATGGAAGGTCTaGAGCTCCTCCCCCGCTGGG +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLPPWKV*SSSPAG
Trigger: CCCAGCGGGGGAGGAGCTGCAGACCTTCCATGGGGG...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCCTTTCCTCTCCCCACTaGGCTCCCGCTCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETLSSPH*APAPGR
Trigger: CCTCCCTGGAGCGGGAGCGCAGTGGGGAGAGGAAAG...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCATGGCTCGACCCAGCTaGGATCGGGACTGGGGGCTG +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFMARPS*DRDWGL
Trigger: CAGCCCCCAGTCCCGATCCCAGCTGGGTCGAGCCAT...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397801.6
CDS-3UTR CCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCGATCCTCCCGCACAGTaGCCACACGCGCCCCGTTCT +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFDPPAQ*PHAPRS
Trigger: AGAACGGGGCGCGTGTGGCCACTGTGCGGGAGGATC...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCGGCCCATGGGTGGCCTaGAACTGGCTCCAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSGPWVA*NWLQRG
Trigger: GCCTCTCTGGAGCCAGTTCCAGGCCACCCATGGGCC...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGCGGGGCCAAGGCCCATaGGTGGCCTGGAACTGGCTC +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWRGQGP*VAWNWL
Trigger: GAGCCAGTTCCAGGCCACCCATGGGCCTTGGCCCCG...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCGCTCCACTGTCCCCCTaGCTCCACTCTGGAGGAGCG +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSAPLSP*LHSGGA
Trigger: CGCTCCTCCAGAGTGGAGCCAGGGGGACAGTGGAGC...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCCGGTGGCAAGGGTGGTaGGGGCAAGTCCCCAGGACT +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSRWQGW*GQVPRT
Trigger: AGTCCTGGGGACTTGCCCCCACCACCCTTGCCACCG...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAATGGCGGTGGCAAGGGTaGTGGGGGCAAGTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVEWRWQG*WGQVPR
Trigger: CCTGGGGACTTGCCCCCACCACCCTTGCCACCGCCA...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCCCAGGCCTCTTCATCTaGGTGGAGCACCCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFPGLFI*VEHPLG
Trigger: GCCCAGCGGGTGCTCCACCCAGATGAAGAGGCCTGG...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCCCAGGCCTCTTCATCTaGGTGGAGCACCCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSPGLFI*VEHPLG
Trigger: GCCCAGCGGGTGCTCCACCCAGATGAAGAGGCCTGG...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCCCGTGGAACATGTGCTaGTGCCCTGGCCCCGGGACA +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETPWNMC*CPGPGT
Trigger: TGTCCCGGGGCCAGGGCACCAGCACATGTTCCACGG...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTCCGTGGAACATGTGCTaGTGCCCTGGCCCCGGGACA +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITPWNMC*CPGPGT
Trigger: TGTCCCGGGGCCAGGGCACCAGCACATGTTCCACGG...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR TCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTACCGCCAGCGAGGAGTTaGAGCCCAAGAGCAGCTCGC +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLPPARS*SPRAAR
Trigger: GCGAGCTGCTCTTGGGCTTCAACTCCTCGCTGGCGG...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397801.6
CDS-3UTR TCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCCTACCCTTGACCCGTTaGGAGAGGGATCGCCGGGAG +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFLPLTR*ERDRRE
Trigger: CTCCCGGCGATCCCTCTCTCAACGGGTCAAGGGTAG...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397801.6
CDS-3UTR TCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCCCAAGCACCAGCGTCTaGTTGGCTGGTCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETPSTSV*LAGPWR
Trigger: CCTCCAGGGACCAGCCAATCAGACGCTGGTGCTTGG...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCCCAAGCACCAGCGTCTaGTTGGCTGGTCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFPSTSV*LAGPWR
Trigger: CCTCCAGGGACCAGCCAATCAGACGCTGGTGCTTGG...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCCGAGCACGGGGTCCTTaGAGTGGGGGAGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSRARGP*SGGVIS
Trigger: GGAGATGACTCCCCCACTTCAAGGACCCCGTGCTCG...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATCCAGCGAGGCGTTTCTaGTCGCTGCTGCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNPARRF*SLLPPG
Trigger: ACCTGGGGGCAGCAGCGAGCAGAAACGCCTCGCTGG...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGCCAGCGAGGCGTTTCTaGTCGCTGCTGCCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWPARRF*SLLPPG
Trigger: ACCTGGGGGCAGCAGCGAGCAGAAACGCCTCGCTGG...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCTGCTGGCTCCCCCACTaGCACCACCACGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETCWLPH*HHHVSR
Trigger: CCTGGAAACGTGGTGGTGGCAGTGGGGGAGCCAGCA...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCGGTTCCCAGTCACTCTaGAGGGCAGCCACACGGAGG +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFGSQSL*RAATRR
Trigger: CCTCCGTGTGGCTGCCCTGCAGAGTGACTGGGAACC...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCACTTCCGCCAGTCCCTaGTGGCCTCTCCATGGGTCC +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFTSASP*WPLHGS
Trigger: GGACCCATGGAGAGGCCAGCAGGGACTGGCGGAAGT...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGACAGTCCAGGACACCTaGAGGGTCCGGGGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWTVQDT*RVRGPR
Trigger: CCTGGGACCCCGGACCCTGCAGGTGTCCTGGACTGT...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCTCCTCCCTCAGGGCCTaGTACCCTCCAAGACACCCG +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFSSLRA*YPPRHP
Trigger: CGGGTGTCTTGGAGGGTAGCAGGCCCTGAGGGAGGA...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTCCTCCCTCAGGGCCTaGTACCCTCCAAGACACCCG +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSSSLRA*YPPRHP
Trigger: CGGGTGTCTTGGAGGGTAGCAGGCCCTGAGGGAGGA...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCGAGCATTGCGGAGCGTaGCCAGCCTGCTGCAGATCG +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSEHCGA*PACCRS
Trigger: CGATCTGCAGCAGGCTGGGCACGCTCCGCAATGCTC...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTGAGCATTGCGGAGCGTaGCCAGCCTGCTGCAGATCG +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITEHCGA*PACCRS
Trigger: CGATCTGCAGCAGGCTGGGCACGCTCCGCAATGCTC...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATCAGTCCTCGGAGCATTaGGGAGCGTGCCCAGCCTGC +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNQSSEH*GACPAC
Trigger: GCAGGCTGGGCACGCTCCGCAATGCTCCGAGGACTG...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCGAGAGGCCCTCTGAGTaGGGGAAGGACACTGCCGGT +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSERPSE*GKDTAG
Trigger: ACCGGCAGTGTCCTTCCCGCACTCAGAGGGCCTCTC...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCGAGAGGCCCTCTGAGTaGGGGAAGGACACTGCCGGT +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETERPSE*GKDTAG
Trigger: ACCGGCAGTGTCCTTCCCGCACTCAGAGGGCCTCTC...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGTCCCCTGCCAGGTTCTaGCTGGGGCACTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWSPARF*LGHCWL
Trigger: CAGCCAGCAGTGCCCCAGGCAGAACCTGGCAGGGGA...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTATCCCCTGCCAGGTTCTaGCTGGGGCACTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLSPARF*LGHCWL
Trigger: CAGCCAGCAGTGCCCCAGGCAGAACCTGGCAGGGGA...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATTCCCCTGCCAGGTTCTaGCTGGGGCACTGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNSPARF*LGHCWL
Trigger: CAGCCAGCAGTGCCCCAGGCAGAACCTGGCAGGGGA...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAACTTTCCTCTCCCCACTaGGCTCCCGCTCCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVELSSPH*APAPGR
Trigger: CCTCCCTGGAGCGGGAGCGCAGTGGGGAGAGGAAAG...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCTGGAACATGTGCTGGTaGCCTGGCCCCGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFWNMCW*PGPGTG
Trigger: TCCTGTCCCGGGGCCAGGGCACCAGCACATGTTCCA...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGATCCTCCCGCACAGTaGCCACACGCGCCCCGTTCT +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNDPPAQ*PHAPRS
Trigger: AGAACGGGGCGCGTGTGGCCACTGTGCGGGAGGATC...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCATCTGGTCCTGGGGCTaGGTCACCAACTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSIWSWG*VTNWGG
Trigger: CCCACCCCAGTTGGTGACCCAGCCCCAGGACCAGAT...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCATCTGGTCCTGGGGCTaGGTCACCAACTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFIWSWG*VTNWGG
Trigger: CCCACCCCAGTTGGTGACCCAGCCCCAGGACCAGAT...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGCCAGGAGCTGCCATCTaGTCCTGGGGCTGGGTCACC +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWPGAAI*SWGWVT
Trigger: GGTGACCCAGCCCCAGGACCAGATGGCAGCTCCTGG...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTCTCCAGCAGGGCCTTaGCCAGGATGCTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSSPAGP*PGCCQP
Trigger: TGGCTGGCAGCATCCTGGCCAAGGCCCTGCTGGAGA...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCGATCTCAGTGACCACTaGCTGAGAGGGAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFDLSDH*LRGSPR
Trigger: CCGGGGGCTCCCTCTCAGCCAGTGGTCACTGAGATC...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTGGGTGGCCTGGAACTaGCTCCAGAGAGGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSWVAWN*LQRGPL
Trigger: CAGAGGGCCTCTCTGGAGCCAGTTCCAGGCCACCCA...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGGCCCATGGGTGGCCTaGAACTGGCTCCAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLGPWVA*NWLQRG
Trigger: GCCTCTCTGGAGCCAGTTCCAGGCCACCCATGGGCC...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTGGGCTTCGAGATGGGTaGGGCCACGAATCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITGLRDG*GHESAS
Trigger: GCTGGCAGATTCGTGGCCCCACCCATCTCGAAGCCC...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTCGAGGGGCTTCGAGATaGGTGGGGCCACGAATCTGC +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITRGASR*VGPRIC
Trigger: GCAGATTCGTGGCCCCACCCATCTCGAAGCCCCTCG...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCCTTCCCCTGGGTTCCTaGGCCGAGGGGCTTCGAGAT +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETLPLGS*AEGLRD
Trigger: ATCTCGAAGCCCCTCGGCCCAGGAACCCAGGGGAAG...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCGGCCGTGCCCCTaGCCGTCTGAGCTAGATACA +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNGRPCP*PSELDT
Trigger: TGTATCTAGCTCAGACGGCCAGGGGCACGGCCGCCC...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGGGGCGGCCGTGCCCCTaGCCGTCTGAGCTAGATACA +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWGRPCP*PSELDT
Trigger: TGTATCTAGCTCAGACGGCCAGGGGCACGGCCGCCC...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGGGCGGCCGTGCCCCTaGCCGTCTGAGCTAGATACA +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLGRPCP*PSELDT
Trigger: TGTATCTAGCTCAGACGGCCAGGGGCACGGCCGCCC...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTGGGGGAAGCCCCCATaGAAGGTCTGCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSWGKPP*KVCSSS
Trigger: GGAGGAGCTGCAGACCTTCCATGGGGGCTTCCCCCA...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCTCCACTGTCCCCCTaGCTCCACTCTGGAGGAGCG +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLAPLSP*LHSGGA
Trigger: CGCTCCTCCAGAGTGGAGCCAGGGGGACAGTGGAGC...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTCTGCCAGGTTCTGCCTaGGGCACTGCTGGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITLPGSA*GTAGCA
Trigger: AGCACAGCCAGCAGTGCCCCAGGCAGAACCTGGCAG...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATCGGTGGCAAGGGTGGTaGGGGCAAGTCCCCAGGACT +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNRWQGW*GQVPRT
Trigger: AGTCCTGGGGACTTGCCCCCACCACCCTTGCCACCG...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAACGGTGGCAAGGGTGGTaGGGGCAAGTCCCCAGGACT +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVERWQGW*GQVPRT
Trigger: AGTCCTGGGGACTTGCCCCCACCACCCTTGCCACCG...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCCTCTTCCTCTGGCGGTaGCAAGGGTGGTGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETLFLWR*QGWWGQ
Trigger: TTGCCCCCACCACCCTTGCCACCGCCAGAGGAAGAG...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGGCTCGCCTCTTCCTCTaGCGGTGGCAAGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWARLFL*RWQGWW
Trigger: CCACCACCCTTGCCACCGCCAGAGGAAGAGGCGAGC...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGCTCGCCTCTTCCTCTaGCGGTGGCAAGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNARLFL*RWQGWW
Trigger: CCACCACCCTTGCCACCGCCAGAGGAAGAGGCGAGC...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCTCTTCATCTGGGTaGAGCACCCGCTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLASSSG*STRWAA
Trigger: GGCAGCCCAGCGGGTGCTCCACCCAGATGAAGAGGC...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAGCCTCTTCATCTGGGTaGAGCACCCGCTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVEASSSG*STRWAA
Trigger: GGCAGCCCAGCGGGTGCTCCACCCAGATGAAGAGGC...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTACCAGGCCTCTTCATCTaGGTGGAGCACCCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLPGLFI*VEHPLG
Trigger: GCCCAGCGGGTGCTCCACCCAGATGAAGAGGCCTGG...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCCATGTGCTGGTGCCCTaGCCCCGGGACAGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSHVLVP*PRDRKL
Trigger: AAGCTTCCTGTCCCGGGGCCAGGGCACCAGCACATG...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATCCGTGGAACATGTGCTaGTGCCCTGGCCCCGGGACA +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNPWNMC*CPGPGT
Trigger: TGTCCCGGGGCCAGGGCACCAGCACATGTTCCACGG...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATAGCTGCTGGAGCCCCTaGAAGAGTTGCTGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNSCWSP*KSCCRP
Trigger: CGGCCGGCAGCAACTCTTCCAGGGGCTCCAGCAGCT...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAAGCTGCTGGAGCCCCTaGAAGAGTTGCTGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLSCWSP*KSCCRP
Trigger: CGGCCGGCAGCAACTCTTCCAGGGGCTCCAGCAGCT...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAGCTGCTGGAGCCCCTaGAAGAGTTGCTGCCGGCCG +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWSCWSP*KSCCRP
Trigger: CGGCCGGCAGCAACTCTTCCAGGGGCTCCAGCAGCT...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATCCTGGGGACAGGGGGTaGCGCAGAGCGTTCAGACAG +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNPGDRG*RRAFRQ
Trigger: CTGTCTGAACGCTCTGCGCCACCCCCTGTCCCCAGG...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538940.5
CDS-3UTR TCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCCTCCGGTCCTACCCTTaGCCCGTTGAGAGAGGGATC +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETLRSYP*PVERGI
Trigger: GATCCCTCTCTCAACGGGTCAAGGGTAGGACCGGAG...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397801.6
CDS-3UTR TCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTCAGCCAGGACCACCTaGTTCACTGGTCTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSSARTT*FTGLRR
Trigger: CCTGCGCAGACCAGTGAATCAGGTGGTCCTGGCTGA...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGACCCAGATCTCCTaGGGGATGTTGGGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNGTQIS*GMLGEA
Trigger: GGCTTCCCCCAACATCCCTCAGGAGATCTGGGTCCC...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR TCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAGGGACCCAGATCTCCTaGGGGATGTTGGGGGAAGCC +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVEGTQIS*GMLGEA
Trigger: GGCTTCCCCCAACATCCCTCAGGAGATCTGGGTCCC...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR TCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCCTGGGCTCCGTCAGGTaGCTTCTCTCAGGCATTGGC +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSLGSVR*LLSGIG
Trigger: GCCAATGCCTGAGAGAAGTCACCTGACGGAGCCCAG...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR TCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTGGGAGGGTCAGGAGGTaGGGGTGTAAGAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITGRVRR*GCKSGC
Trigger: ACAGCCACTCTTACACCCTCACCTCCTGACCCTCCC...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR TCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCGGGAGGGTCAGGAGGTaGGGGTGTAAGAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFGRVRR*GCKSGC
Trigger: ACAGCCACTCTTACACCCTCACCTCCTGACCCTCCC...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR TCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCTGGGCTGGGATACACTaGGAGGGGAACTCGGCCCAA +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFWAGIH*EGNSAQ
Trigger: TTGGGCCGAGTTCCCCTCTCAGTGTATCCCAGCCCA...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR TCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTTGGGCTGGGATACACTaGGAGGGGAACTCGGCCCAA +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITWAGIH*EGNSAQ
Trigger: TTGGGCCGAGTTCCCCTCTCAGTGTATCCCAGCCCA...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR TCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTACGAGCACGGGGTCCTTaGAGTGGGGGAGTCATCTCC +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLRARGP*SGGVIS
Trigger: GGAGATGACTCCCCCACTTCAAGGACCCCGTGCTCG...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTAGCAGATCTGGCGGCTaGTCCACGATGCGGGGCATA +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITSRSGG*STMRGI
Trigger: TATGCCCCGCATCGTGGAGCAGCCGCCAGATCTGCT...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAGCAGATCTGGCGGCTaGTCCACGATGCGGGGCATA +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETSRSGG*STMRGI
Trigger: TATGCCCCGCATCGTGGAGCAGCCGCCAGATCTGCT...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTGTTTCTGCTCGCTGCTaGCCCCAGGTAGTTGCGAGC +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITVSARC*PQVVAS
Trigger: GCTCGCAACTACCTGGGGGCAGCAGCGAGCAGAAAC...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGGCGTTTCTGCTCGCTaGTGCCCCCAGGTAGTTGCG +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLGVSAR*CPQVVA
Trigger: CGCAACTACCTGGGGGCAGCAGCGAGCAGAAACGCC...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGCGTTTCTGCTCGCTaGTGCCCCCAGGTAGTTGCG +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNGVSAR*CPQVVA
Trigger: CGCAACTACCTGGGGGCAGCAGCGAGCAGAAACGCC...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTATGCTGGCTCCCCCACTaGCACCACCACGTTTCCAGG +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLCWLPH*HHHVSR
Trigger: CCTGGAAACGTGGTGGTGGCAGTGGGGGAGCCAGCA...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTCACGCATTCCAGTACTaGTGGCTCCCCCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITHAFQY*WLPHCH
Trigger: GTGGCAGTGGGGGAGCCAGCAGTACTGGAATGCGTG...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTGTTCCCCATCCTCCTTaGGCCAGCGTAGACGAGGTG +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITVPHPP*ASVDEV
Trigger: CACCTCGTCTACGCTGGCGCAAGGAGGATGGGGAAC...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCGTTCCCCATCCTCCTTaGGCCAGCGTAGACGAGGTG +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETVPHPP*ASVDEV
Trigger: CACCTCGTCTACGCTGGCGCAAGGAGGATGGGGAAC...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAGGTTCCCAGTCACTCTaGAGGGCAGCCACACGGAGG +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVEGSQSL*RAATRR
Trigger: CCTCCGTGTGGCTGCCCTGCAGAGTGACTGGGAACC...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCTCCCCCTGCAGCCACTaGCCATCCTTCTTCCATCGG +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETSPCSH*PSFFHR
Trigger: CCGATGGAAGAAGGATGGGCAGTGGCTGCAGGGGGA...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATACTTCCGCCAGTCCCTaGTGGCCTCTCCATGGGTCC +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNTSASP*WPLHGS
Trigger: GGACCCATGGAGAGGCCAGCAGGGACTGGCGGAAGT...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAGGACTATGGGCTCCTaGAGGCGCACAGCCACTTCC +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETRTMGS*RRTATS
Trigger: GGAAGTGGCTGTGCGCCTGCAGGAGCCCATAGTCCT...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCGACACCCGGAAACCTTaGACCAGCTGGACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETDTRKP*TSWTGP
Trigger: TGGCCCAGTCCAGCTGGTGCAAGGTTTCCGGGTGTC...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTGGGCCTCCTCAGGAATaGTCCTGGTCACAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITGPPQE*SWSQRG
Trigger: GCCTCTCTGTGACCAGGAGCATTCCTGAGGAGGCCC...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCGGAGCGTGCCCAGCCTaGTGCAGATCGATTGAGGTG +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSGACPA*CRSIEV
Trigger: CACCTCAATCGATCTGCAGCAGGCTGGGCACGCTCC...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCGCCTCGCTTCACGGATaGCCAGCATGGGCTGGGATA +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFASLHG*PAWAGI
Trigger: TATCCCAGCCCATGCTGGGCATCCGTGAAGCGAGGC...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTGCCTCGCTTCACGGATaGCCAGCATGGGCTGGGATA +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITASLHG*PAWAGI
Trigger: TATCCCAGCCCATGCTGGGCATCCGTGAAGCGAGGC...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTATGGAACATGTGCTGGTaGCCTGGCCCCGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLWNMCW*PGPGTG
Trigger: TCCTGTCCCGGGGCCAGGGCACCAGCACATGTTCCA...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATTGGAACATGTGCTGGTaGCCTGGCCCCGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNWNMCW*PGPGTG
Trigger: TCCTGTCCCGGGGCCAGGGCACCAGCACATGTTCCA...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCCCCTGGAAGAGTTGCTaGCGGCCGTGGAACATGTGC +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSPWKSC*RPWNMC
Trigger: GCACATGTTCCACGGCCGGCAGCAACTCTTCCAGGG...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCCCCTGGAAGAGTTGCTaGCGGCCGTGGAACATGTGC +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETPWKSC*RPWNMC
Trigger: GCACATGTTCCACGGCCGGCAGCAACTCTTCCAGGG...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCAGCCCCTGGAAGAGTTaGTGCCGGCCGTGGAACATG +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSSPWKS*CRPWNM
Trigger: CATGTTCCACGGCCGGCAGCAACTCTTCCAGGGGCT...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGCAGGTAGCGCAGCATaGCTCGACCCAGCTGGGATC +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNAGSAA*LDPAGI
Trigger: GATCCCAGCTGGGTCGAGCCATGCTGCGCTACCTGC...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397801.6
CDS-3UTR CCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCAGCTCGCTGGAGTTaGAGATGTCCCCGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLAARWS*RCPRPE
Trigger: CTCTGGCCGGGGACATCTCCAACTCCAGCGAGCTGC...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397801.6
CDS-3UTR CCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGGGAGACCAGCAGATCTaGCGGCTGCTCCACGATGCG +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWGDQQI*RLLHDA
Trigger: CGCATCGTGGAGCAGCCGCCAGATCTGCTGGTCTCC...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTGCATTCCAGTACTGCTaGCTCCCCCACTGCCACCAC +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITAFQYC*LPHCHH
Trigger: GTGGTGGCAGTGGGGGAGCCAGCAGTACTGGAATGC...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGCTGCCATCTGGTCCTaGGGCTGGGTCACCAACTGG +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNAAIWS*GWVTNW
Trigger: CCAGTTGGTGACCCAGCCCCAGGACCAGATGGCAGC...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAGCTGCCATCTGGTCCTaGGGCTGGGTCACCAACTGG +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVEAAIWS*GWVTNW
Trigger: CCAGTTGGTGACCCAGCCCCAGGACCAGATGGCAGC...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATTCTCCAGCAGGGCCTTaGCCAGGATGCTGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNSPAGP*PGCCQP
Trigger: TGGCTGGCAGCATCCTGGCCAAGGCCCTGCTGGAGA...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGATCTCAGTGACCACTaGCTGAGAGGGAGCCCCCGG +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNDLSDH*LRGSPR
Trigger: CCGGGGGCTCCCTCTCAGCCAGTGGTCACTGAGATC...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAGCCCCTCCTGGCCTTaGGCTTGCACCTTGATCTGG +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETSPSWP*ACTLIW
Trigger: CCAGATCAAGGTGCAAGCCCAAGGCCAGGAGGGGCT...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAATGGGTGGCCTGGAACTaGCTCCAGAGAGGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVEWVAWN*LQRGPL
Trigger: CAGAGGGCCTCTCTGGAGCCAGTTCCAGGCCACCCA...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAGCCAAGGCCCATGGGTaGCCTGGAACTGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVEAKAHG*PGTGSR
Trigger: TCTGGAGCCAGTTCCAGGCCACCCATGGGCCTTGGC...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCAAGGCCCATGGGTaGCCTGGAACTGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLAKAHG*PGTGSR
Trigger: TCTGGAGCCAGTTCCAGGCCACCCATGGGCCTTGGC...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAGGGCTTCGAGATGGGTaGGGCCACGAATCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVEGLRDG*GHESAS
Trigger: GCTGGCAGATTCGTGGCCCCACCCATCTCGAAGCCC...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGGGCTTCGAGATGGGTaGGGCCACGAATCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLGLRDG*GHESAS
Trigger: GCTGGCAGATTCGTGGCCCCACCCATCTCGAAGCCC...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTACGAGGGGCTTCGAGATaGGTGGGGCCACGAATCTGC +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLRGASR*VGPRIC
Trigger: GCAGATTCGTGGCCCCACCCATCTCGAAGCCCCTCG...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAACGAGGGGCTTCGAGATaGGTGGGGCCACGAATCTGC +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVERGASR*VGPRIC
Trigger: GCAGATTCGTGGCCCCACCCATCTCGAAGCCCCTCG...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAACTTCCCCTGGGTTCCTaGGCCGAGGGGCTTCGAGAT +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVELPLGS*AEGLRD
Trigger: ATCTCGAAGCCCCTCGGCCCAGGAACCCAGGGGAAG...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTACTTCCCCTGGGTTCCTaGGCCGAGGGGCTTCGAGAT +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLLPLGS*AEGLRD
Trigger: ATCTCGAAGCCCCTCGGCCCAGGAACCCAGGGGAAG...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGTGGGGGAAGCCCCCATaGAAGGTCTGCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWWGKPP*KVCSSS
Trigger: GGAGGAGCTGCAGACCTTCCATGGGGGCTTCCCCCA...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTACCCCTGGCTCCACTCTaGAGGAGCGTACTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLPLAPL*RSVLAP
Trigger: TGGAGCCAGTACGCTCCTCCAGAGTGGAGCCAGGGG...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAACCCCTGGCTCCACTCTaGAGGAGCGTACTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVEPLAPL*RSVLAP
Trigger: TGGAGCCAGTACGCTCCTCCAGAGTGGAGCCAGGGG...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATCCCCTGGCTCCACTCTaGAGGAGCGTACTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNPLAPL*RSVLAP
Trigger: TGGAGCCAGTACGCTCCTCCAGAGTGGAGCCAGGGG...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTTGGGGGCAGGGCTTCTaGCCAGTTCAGAGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITWGQGF*PVQRGH
Trigger: ATGCCCTCTCTGAACTGGCCAGAAGCCCTGCCCCCA...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCACCCTCCACTGGAGCTaGGCTCCGTCAGGTGACTTC +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETTLHWS*APSGDF
Trigger: GAAGTCACCTGACGGAGCCCAGCTCCAGTGGAGGGT...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCATGTCAGTTGGGGGCTaGGGAGGGTCAGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETMSVGG*GGSGGE
Trigger: CTCACCTCCTGACCCTCCCCAGCCCCCAACTGACAT...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCCAAGGGGCACCCTCCTaGGCATCTGATGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFQGAPS*ASDGDG
Trigger: CCCATCTCCATCAGATGCCCAGGAGGGTGCCCCTTG...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCCAAGGGGCACCCTCCTaGGCATCTGATGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETQGAPS*ASDGDG
Trigger: CCCATCTCCATCAGATGCCCAGGAGGGTGCCCCTTG...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGCTGCCAGGTTCTGCCTaGGGCACTGCTGGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWLPGSA*GTAGCA
Trigger: AGCACAGCCAGCAGTGCCCCAGGCAGAACCTGGCAG...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTACTGCCAGGTTCTGCCTaGGGCACTGCTGGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLLPGSA*GTAGCA
Trigger: AGCACAGCCAGCAGTGCCCCAGGCAGAACCTGGCAG...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAACTCTTCCTCTGGCGGTaGCAAGGGTGGTGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVELFLWR*QGWWGQ
Trigger: TTGCCCCCACCACCCTTGCCACCGCCAGAGGAAGAG...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATCTCTTCCTCTGGCGGTaGCAAGGGTGGTGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNLFLWR*QGWWGQ
Trigger: TTGCCCCCACCACCCTTGCCACCGCCAGAGGAAGAG...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTACATGTGCTGGTGCCCTaGCCCCGGGACAGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLHVLVP*PRDRKL
Trigger: AAGCTTCCTGTCCCGGGGCCAGGGCACCAGCACATG...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGCATGTGCTGGTGCCCTaGCCCCGGGACAGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWHVLVP*PRDRKL
Trigger: AAGCTTCCTGTCCCGGGGCCAGGGCACCAGCACATG...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR TCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTTGGTCTGCGCAGGAATaGGGGACGCTCCAGTACCAT +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITWSAQE*GTLQYH
Trigger: ATGGTACTGGAGCGTCCCTCATTCCTGCGCAGACCA...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTGGTCTGCGCAGGAATaGGGGACGCTCCAGTACCAT +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSWSAQE*GTLQYH
Trigger: ATGGTACTGGAGCGTCCCTCATTCCTGCGCAGACCA...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTATCAGCCAGGACCACCTaGTTCACTGGTCTGCGCAGG +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLSARTT*FTGLRR
Trigger: CCTGCGCAGACCAGTGAATCAGGTGGTCCTGGCTGA...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTGTGGGACGTGAACACTaGGGGAGCCAGATGCTTCAG +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITVGREH*GSQMLQ
Trigger: CTGAAGCATCTGGCTCCCTCAGTGTTCACGTCCCAC...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCCATCGGACACTGGGTTaGGGGTTCCCAGTCACTCTG +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSHRTLG*GFPVTL
Trigger: CAGAGTGACTGGGAACCCTCAACCCAGTGTCCGATG...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATTGGGCTGCAGACCGCTaGCTGTGTGTGTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNWAADR*LCVSPA
Trigger: AGCTGGAGACACACACAGTCAGCGGTCTGCAGCCCA...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTGTGCCCCTGGCCGTCTaGGCTAGATACAGGGAGATT +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITVPLAV*ARYREI
Trigger: AATCTCCCTGTATCTAGCTCAGACGGCCAGGGGCAC...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR TCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCGTGCCCCTGGCCGTCTaGGCTAGATACAGGGAGATT +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFVPLAV*ARYREI
Trigger: AATCTCCCTGTATCTAGCTCAGACGGCCAGGGGCAC...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR TCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATCTGGGCTCCGTCAGGTaGCTTCTCTCAGGCATTGGC +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNLGSVR*LLSGIG
Trigger: GCCAATGCCTGAGAGAAGTCACCTGACGGAGCCCAG...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR TCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAACTGGGCTCCGTCAGGTaGCTTCTCTCAGGCATTGGC +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVELGSVR*LLSGIG
Trigger: GCCAATGCCTGAGAGAAGTCACCTGACGGAGCCCAG...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR TCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGGGAGGGTCAGGAGGTaGGGGTGTAAGAGTGGCTGT +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLGRVRR*GCKSGC
Trigger: ACAGCCACTCTTACACCCTCACCTCCTGACCCTCCC...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR TCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCACCCTCCTGGGCATCTaGTGGAGATGGGGCATGTCA +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETTLLGI*WRWGMS
Trigger: TGACATGCCCCATCTCCATCAGATGCCCAGGAGGGT...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR TCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCACCCTCCTGGGCATCTaGTGGAGATGGGGCATGTCA +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFTLLGI*WRWGMS
Trigger: TGACATGCCCCATCTCCATCAGATGCCCAGGAGGGT...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCCTGCCCCCAGGTAGTTaGGAGCCACGCAAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFLPPGS*EPRKCR
Trigger: TCTACACTTGCGTGGCTCGCAACTACCTGGGGGCAG...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCCTGCCCCCAGGTAGTTaGGAGCCACGCAAGTGTAGA +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETLPPGS*EPRKCR
Trigger: TCTACACTTGCGTGGCTCGCAACTACCTGGGGGCAG...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGTTTCTGCTCGCTGCTaGCCCCAGGTAGTTGCGAGC +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLVSARC*PQVVAS
Trigger: GCTCGCAACTACCTGGGGGCAGCAGCGAGCAGAAAC...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATCACGCATTCCAGTACTaGTGGCTCCCCCACTGCCAC +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNHAFQY*WLPHCH
Trigger: GTGGCAGTGGGGGAGCCAGCAGTACTGGAATGCGTG...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATACTGAGGGAGCCAGATaGTTCAGCGCGGCCCACACT +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNTEGAR*FSAAHT
Trigger: AGTGTGGGCCGCGCTGAAGCATCTGGCTCCCTCAGT...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCCCAGCATCCCCACGCTaGACCGCGGTGATGTTAAGT +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSPASPR*TAVMLS
Trigger: ACTTAACATCACCGCGGTGCAGCGTGGGGATGCTGG...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGTCCCCCTGCAGCCACTaGCCATCCTTCTTCCATCGG +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWSPCSH*PSFFHR
Trigger: CCGATGGAAGAAGGATGGGCAGTGGCTGCAGGGGGA...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTATGGAGGTCATCCCCCTaGAGCCACTGCCCATCCTTC +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLWRSSP*SHCPSF
Trigger: GAAGGATGGGCAGTGGCTGCAGGGGGATGACCTCCA...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCGCCCCAGGCTCCCACTaGTCGAACCAGAAACAGGTA +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFAPGSH*SNQKQV
Trigger: TACCTGTTTCTGGTTCGAGCAGTGGGAGCCTGGGGC...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCGCCCCAGGCTCCCACTaGTCGAACCAGAAACAGGTA +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETAPGSH*SNQKQV
Trigger: TACCTGTTTCTGGTTCGAGCAGTGGGAGCCTGGGGC...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAGGGCCTCCTCAGGAATaGTCCTGGTCACAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVEGPPQE*SWSQRG
Trigger: GCCTCTCTGTGACCAGGAGCATTCCTGAGGAGGCCC...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGAGCGTGCCCAGCCTaGTGCAGATCGATTGAGGTG +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNGACPA*CRSIEV
Trigger: CACCTCAATCGATCTGCAGCAGGCTGGGCACGCTCC...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCCCGCTGGGTCAATGGTaGTATAGACAGGACCCTCGC +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFPLGQW*YRQDPR
Trigger: GCGAGGGTCCTGTCTATAGCACCATTGACCCAGCGG...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGGCCTCGCTTCACGGATaGCCAGCATGGGCTGGGATA +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWASLHG*PAWAGI
Trigger: TATCCCAGCCCATGCTGGGCATCCGTGAAGCGAGGC...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAACCCTGGAAGAGTTGCTaGCGGCCGTGGAACATGTGC +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVEPWKSC*RPWNMC
Trigger: GCACATGTTCCACGGCCGGCAGCAACTCTTCCAGGG...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAAGCCCCTGGAAGAGTTaGTGCCGGCCGTGGAACATG +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVESPWKS*CRPWNM
Trigger: CATGTTCCACGGCCGGCAGCAACTCTTCCAGGGGCT...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAGCCCCTGGAAGAGTTaGTGCCGGCCGTGGAACATG +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWSPWKS*CRPWNM
Trigger: CATGTTCCACGGCCGGCAGCAACTCTTCCAGGGGCT...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAGCTCAGTCCCCACCTaGCTACCCTCTCCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWSSVPT*LPSPSA
Trigger: TGCAGAGGGAGAGGGTAGGCAGGTGGGGACTGAGCT...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538940.5
CDS-3UTR CCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGGCATTCCAGTACTGCTaGCTCCCCCACTGCCACCAC +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWAFQYC*LPHCHH
Trigger: GTGGTGGCAGTGGGGGAGCCAGCAGTACTGGAATGC...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCCAGCGTCTGATTGGCTaGTCCCTGGAGGATGACAGG +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSQRLIG*SLEDDR
Trigger: CCTGTCATCCTCCAGGGACCAGCCAATCAGACGCTG...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCCCCCTGTGGAACTCTTaGCCACGCAGCTGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETPLWNS*PRSCRS
Trigger: GCTTCTACAGCTGCGTGGCCAAGAGTTCCACAGGGG...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTATGTGGCTTCCCCTGTaGAACTCTTGGCCACGCAGC +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITMWLPL*NSWPRS
Trigger: GCTGCGTGGCCAAGAGTTCCACAGGGGAAGCCACAT...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCTGCAGCCCCAGTTTGTaGGTTGGGCTTCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETCSPSL*VGLPGQ
Trigger: CTGACCTGGAAGCCCAACCCACAAACTGGGGCTGCA...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTTGCACCAGCTGGACTaGGCCATCCACAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSLHQLD*AIHSPG
Trigger: TCCTGGACTGTGGATGGCCCAGTCCAGCTGGTGCAA...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAGCCCCTCCTGGCCTTaGGCTTGCACCTTGATCTGG +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWSPSWP*ACTLIW
Trigger: CCAGATCAAGGTGCAAGCCCAAGGCCAGGAGGGGCT...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTCCCCCGCTGGGTCAATaGTGCTATAGACAGGACCCT +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITPPLGQ*CYRQDP
Trigger: AGGGTCCTGTCTATAGCACCATTGACCCAGCGGGGG...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCCAGCTCCTCCCCCGCTaGGTCAATGGTGCTATAGAC +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFQLLPR*VNGAID
Trigger: GTCTATAGCACCATTGACCCAGCGGGGGAGGAGCTG...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCTCTCCTGAGGGATGTTaGGGGAAGCCCCCATGGAAG +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFSPEGC*GKPPWK
Trigger: CTTCCATGGGGGCTTCCCCCAACATCCCTCAGGAGA...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTCTCCTGAGGGATGTTaGGGGAAGCCCCCATGGAAG +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSSPEGC*GKPPWK
Trigger: CTTCCATGGGGGCTTCCCCCAACATCCCTCAGGAGA...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCTCTGGAGGAGCGTACTaGCTCCAGGGACCCAGATCT +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETSGGAY*LQGPRS
Trigger: AGATCTGGGTCCCTGGAGCCAGTACGCTCCTCCAGA...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCTCTGGAGGAGCGTACTaGCTCCAGGGACCCAGATCT +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFSGGAY*LQGPRS
Trigger: AGATCTGGGTCCCTGGAGCCAGTACGCTCCTCCAGA...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATTCACTTTGCCTCCCTTaGCTCCACTGTCCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNSLCLP*LHCPPG
Trigger: GCCAGGGGGACAGTGGAGCCAAGGGAGGCAAAGTGA...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAATCACTTTGCCTCCCTTaGCTCCACTGTCCCCCTGGC +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVESLCLP*LHCPPG
Trigger: GCCAGGGGGACAGTGGAGCCAAGGGAGGCAAAGTGA...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTATGGGGGCAGGGCTTCTaGCCAGTTCAGAGAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLWGQGF*PVQRGH
Trigger: ATGCCCTCTCTGAACTGGCCAGAAGCCCTGCCCCCA...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTACTTCTCTCAGGCATTaGCGGGCACCACTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITTSLRH*RAPLLW
Trigger: CCAGAGGAGTGGTGCCCGCCAATGCCTGAGAGAAGT...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCACTTCTCTCAGGCATTaGCGGGCACCACTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETTSLRH*RAPLLW
Trigger: CCAGAGGAGTGGTGCCCGCCAATGCCTGAGAGAAGT...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATACCCTCCACTGGAGCTaGGCTCCGTCAGGTGACTTC +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNTLHWS*APSGDF
Trigger: GAAGTCACCTGACGGAGCCCAGCTCCAGTGGAGGGT...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAATGTCAGTTGGGGGCTaGGGAGGGTCAGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVEMSVGG*GGSGGE
Trigger: CTCACCTCCTGACCCTCCCCAGCCCCCAACTGACAT...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAATGTCAGTTGGGGGCTaGGGAGGGTCAGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLMSVGG*GGSGGE
Trigger: CTCACCTCCTGACCCTCCCCAGCCCCCAACTGACAT...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGCAAGGGGCACCCTCCTaGGCATCTGATGGAGATGGG +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWQGAPS*ASDGDG
Trigger: CCCATCTCCATCAGATGCCCAGGAGGGTGCCCCTTG...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCCCGGGACAGGAAGCTTaGTCTGCTGTATGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSPGQEA*SAVWEP
Trigger: TGGCTCCCATACAGCAGACCAAGCTTCCTGTCCCGG...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTCCGGGACAGGAAGCTTaGTCTGCTGTATGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITPGQEA*SAVWEP
Trigger: TGGCTCCCATACAGCAGACCAAGCTTCCTGTCCCGG...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAAGTTGCTGCCGGCCGTaGAACATGTGCTGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVESCCRP*NMCWCP
Trigger: AGGGCACCAGCACATGTTCCACGGCCGGCAGCAACT...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATAGTTGCTGCCGGCCGTaGAACATGTGCTGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNSCCRP*NMCWCP
Trigger: AGGGCACCAGCACATGTTCCACGGCCGGCAGCAACT...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAAGTTGCTGCCGGCCGTaGAACATGTGCTGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLSCCRP*NMCWCP
Trigger: AGGGCACCAGCACATGTTCCACGGCCGGCAGCAACT...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTATCGGCGTTTCTGTCCTaGCCTTTGGCTCTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLSAFLS*PLALAP
Trigger: CGGAGCCAGAGCCAAAGGCCAGGACAGAAACGCCGA...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGTCGGCGTTTCTGTCCTaGCCTTTGGCTCTGGCTCCG +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWSAFLS*PLALAP
Trigger: CGGAGCCAGAGCCAAAGGCCAGGACAGAAACGCCGA...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGGAGTTTCAGGACAGTaGCGGTGGTGTTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLGVSGQ*RWCWGG
Trigger: CCCACCCCAACACCACCGCCACTGTCCTGAAACTCC...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543966.5
CDS-3UTR TCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGTGGGACGTGAACACTaGGGGAGCCAGATGCTTCAG +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNVGREH*GSQMLQ
Trigger: CTGAAGCATCTGGCTCCCTCAGTGTTCACGTCCCAC...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAACATCGGACACTGGGTTaGGGGTTCCCAGTCACTCTG +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVEHRTLG*GFPVTL
Trigger: CAGAGTGACTGGGAACCCTCAACCCAGTGTCCGATG...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTCGTTGGCCATTGTCTTaGACTGGAGGTCATCCCCCT +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITRWPLS*TGGHPP
Trigger: AGGGGGATGACCTCCAGTTCAAGACAATGGCCAACG...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCTGCCAGCTGCTGGGCTaGAGGCCTCTATCACATAAG +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETCQLLG*RPLSHK
Trigger: CTTATGTGATAGAGGCCTTCAGCCCAGCAGCTGGCA...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTGCAGATCGATTGAGGTaGAAGCGGCTCTCATTGCCC +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITADRLR*KRLSLP
Trigger: GGGCAATGAGAGCCGCTTTCACCTCAATCGATCTGC...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCGCAGATCGATTGAGGTaGAAGCGGCTCTCATTGCCC +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSADRLR*KRLSLP
Trigger: GGGCAATGAGAGCCGCTTTCACCTCAATCGATCTGC...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAGGCCGTGTAGTGGCTaGGCTCTTTGCGCTGTTTCC +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWRPCSG*ALCAVS
Trigger: GGAAACAGCGCAAAGAGCTCAGCCACTACACGGCCT...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAGTGCCCCTGGCCGTCTaGGCTAGATACAGGGAGATT +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVEVPLAV*ARYREI
Trigger: AATCTCCCTGTATCTAGCTCAGACGGCCAGGGGCAC...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR TCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGACCCTCCTGGGCATCTaGTGGAGATGGGGCATGTCA +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWTLLGI*WRWGMS
Trigger: TGACATGCCCCATCTCCATCAGATGCCCAGGAGGGT...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR TCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGTGGGGACGGAGAGCCTaGAGAGGCCAGCAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWWGRRA*RGQQRK
Trigger: TTTCCTTTGCTGGCCTCTTCAGGCTCTCCGTCCCCA...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543966.5
CDS-3UTR GCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCTACCATGACTTCAGCTaGCGCACTCTCCCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFYHDFS*RTLPFS
Trigger: GGAGAACGGGAGAGTGCGGCAGCTGAAGTCATGGTA...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCCCTGATTCACTGGTCTaGGCAGGAATGAGGGACGCT +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSPDSLV*AGMRDA
Trigger: AGCGTCCCTCATTCCTGCGCAGACCAGTGAATCAGG...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAACCAGCATCCCCACGCTaGACCGCGGTGATGTTAAGT +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVEPASPR*TAVMLS
Trigger: ACTTAACATCACCGCGGTGCAGCGTGGGGATGCTGG...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCCAGCTGCACGCCATCTaGCACAGTACGCCATGTGTT +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETQLHAI*HSTPCV
Trigger: AACACATGGCGTACTGTGGCAGATGGCGTGCAGCTG...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCGAAAGCGGCTCTCATTaGCCAGGCACCAGATCTGGT +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETESGSH*PGTRSG
Trigger: ACCAGATCTGGTGCCTGGGCAATGAGAGCCGCTTTC...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCGCGTGCCCAGCCTGCTaGAGATCGATTGAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFACPAC*RSIEVK
Trigger: TTTCACCTCAATCGATCTGCAGCAGGCTGGGCACGC...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTACCGCTGGGTCAATGGTaGTATAGACAGGACCCTCGC +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLPLGQW*YRQDPR
Trigger: GCGAGGGTCCTGTCTATAGCACCATTGACCCAGCGG...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTGTACCACTCAATGTTaGGTCGGGGTCGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSCTTQC*VGVGLQ
Trigger: CTGAAGGCCGACCCCGACCCAACATTGAGTGGTACA...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCCCTTTGGTCTCGCACTaGAAAGCCACGCTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFPLVSH*KATLSP
Trigger: TGGAGAGAGCGTGGCTTTCCAGTGCGAGACCAAAGG...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCCCAGAAGATGGCAGGTaGGGGGTTTCCTTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFPEDGR*GVSFGL
Trigger: GAGACCAAAGGAAACCCCCCACCTGCCATCTTCTGG...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCCCAGAAGATGGCAGGTaGGGGGTTTCCTTTGGTCTC +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSPEDGR*GVSFGL
Trigger: GAGACCAAAGGAAACCCCCCACCTGCCATCTTCTGG...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAACAGCGTCTGATTGGCTaGTCCCTGGAGGATGACAGG +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVEQRLIG*SLEDDR
Trigger: CCTGTCATCCTCCAGGGACCAGCCAATCAGACGCTG...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGCCCCTGTGGAACTCTTaGCCACGCAGCTGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWPLWNS*PRSCRS
Trigger: GCTTCTACAGCTGCGTGGCCAAGAGTTCCACAGGGG...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAATGTGGCTTCCCCTGTaGAACTCTTGGCCACGCAGC +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLMWLPL*NSWPRS
Trigger: GCTGCGTGGCCAAGAGTTCCACAGGGGAAGCCACAT...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATTGCAGCCCCAGTTTGTaGGTTGGGCTTCCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNCSPSL*VGLPGQ
Trigger: CTGACCTGGAAGCCCAACCCACAAACTGGGGCTGCA...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTGTGTTGCCAGCTGCTaGGCTGAAGGCCTCTATCAC +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSCVASC*AEGLYH
Trigger: GTGATAGAGGCCTTCAGCCCAGCAGCTGGCAACACA...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATTTGCACCAGCTGGACTaGGCCATCCACAGTCCAGGA +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNLHQLD*AIHSPG
Trigger: TCCTGGACTGTGGATGGCCCAGTCCAGCTGGTGCAA...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAAACCTTGCACCAGCTaGACTGGGCCATCCACAGTC +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETKPCTS*TGPSTV
Trigger: GACTGTGGATGGCCCAGTCCAGCTGGTGCAAGGTTT...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCGCTTGCACCTTGATCTaGATTTGGGTCCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETACTLI*IWVPGG
Trigger: CCCTCCAGGGACCCAAATCCAGATCAAGGTGCAAGC...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCCCCAGGCACCAGATCTaGTATTCCGTGATGACCCCA +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETPRHQI*YSVMTP
Trigger: TGGGGTCATCACGGAATACCAGATCTGGTGCCTGGG...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGCCCCCGCTGGGTCAATaGTGCTATAGACAGGACCCT +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWPPLGQ*CYRQDP
Trigger: AGGGTCCTGTCTATAGCACCATTGACCCAGCGGGGG...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATCCCCCGCTGGGTCAATaGTGCTATAGACAGGACCCT +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNPPLGQ*CYRQDP
Trigger: AGGGTCCTGTCTATAGCACCATTGACCCAGCGGGGG...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGCAGCTCCTCCCCCGCTaGGTCAATGGTGCTATAGAC +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWQLLPR*VNGAID
Trigger: GTCTATAGCACCATTGACCCAGCGGGGGAGGAGCTG...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAATCTCCTGAGGGATGTTaGGGGAAGCCCCCATGGAAG +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVESPEGC*GKPPWK
Trigger: CTTCCATGGGGGCTTCCCCCAACATCCCTCAGGAGA...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATACTTCTCTCAGGCATTaGCGGGCACCACTCCTCTGG +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNTSLRH*RAPLLW
Trigger: CCAGAGGAGTGGTGCCCGCCAATGCCTGAGAGAAGT...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTGTCCATAGGAAGGTGTaGGAGAGGGGGTTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITVHRKV*ERGFPF
Trigger: GAAGGGAAACCCCCTCTCCCACACCTTCCTATGGAC...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCATGCCCAGCATGGGCTaGGATACACTGAGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSMPSMG*DTLRGE
Trigger: TTCCCCTCTCAGTGTATCCCAGCCCATGCTGGGCAT...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR TCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTTCCTTCCTCTTCCTTaGGTCTTGCACCGTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSFLPLP*VLHRPS
Trigger: GGAAGGACGGTGCAAGACTCAAGGAAGAGGAAGGAA...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGTCCCTCCACGGATCGTaGTCCTTCCTTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWSLHGS*SFLPLP
Trigger: AGGAAGAGGAAGGAAGGATCACGATCCGTGGAGGGA...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATTCCCTCCACGGATCGTaGTCCTTCCTTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNSLHGS*SFLPLP
Trigger: AGGAAGAGGAAGGAAGGATCACGATCCGTGGAGGGA...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGCGTTGGCCATTGTCTTaGACTGGAGGTCATCCCCCT +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWRWPLS*TGGHPP
Trigger: AGGGGGATGACCTCCAGTTCAAGACAATGGCCAACG...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATTGCCAGCTGCTGGGCTaGAGGCCTCTATCACATAAG +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNCQLLG*RPLSHK
Trigger: CTTATGTGATAGAGGCCTTCAGCCCAGCAGCTGGCA...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAACTTGGGCTTGCACCTTaGTCTGGATTTGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVELGLAP*SGFGSL
Trigger: CAGGGACCCAAATCCAGATCAAGGTGCAAGCCCAAG...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATCTTGGGCTTGCACCTTaGTCTGGATTTGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNLGLAP*SGFGSL
Trigger: CAGGGACCCAAATCCAGATCAAGGTGCAAGCCCAAG...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCGTTCCCAGGACACAGTaGTACTGCTGTTGCCATCAC +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFVPRTQ*YCCCHH
Trigger: GTGATGGCAACAGCAGTATCACTGTGTCCTGGGAAC...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCCTGCTGCAGATCGATTaGGGTGAAAGCGGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFLLQID*GESGSH
Trigger: ATGAGAGCCGCTTTCACCTCAATCGATCTGCAGCAG...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCTCCCCGTGGCACTCATaGTATTCTCAATGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFSPWHS*YSQCPN
Trigger: GTTGGGGCATTGAGAATATCATGAGTGCCACGGGGA...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCACGTTTCCAGGAGACTaGCGGAAATCATCACGGAGG +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETTFPGD*RKSSRR
Trigger: CCTCCGTGATGATTTCCGGCAGTCTCCTGGAAACGT...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCACGTTTCCAGGAGACTaGCGGAAATCATCACGGAGG +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSTFPGD*RKSSRR
Trigger: CCTCCGTGATGATTTCCGGCAGTCTCCTGGAAACGT...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTATACCATGACTTCAGCTaGCGCACTCTCCCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLYHDFS*RTLPFS
Trigger: GGAGAACGGGAGAGTGCGGCAGCTGAAGTCATGGTA...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGCCTGATTCACTGGTCTaGGCAGGAATGAGGGACGCT +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWPDSLV*AGMRDA
Trigger: AGCGTCCCTCATTCCTGCGCAGACCAGTGAATCAGG...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGTCCGGATCTCATACCTaGCTGTGGGCAGTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWSGSHT*LWAVPH
Trigger: ATGGGGAACTGCCCACAGGCAGGTATGAGATCCGGA...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTATCCGGATCTCATACCTaGCTGTGGGCAGTTCCCCAT +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLSGSHT*LWAVPH
Trigger: ATGGGGAACTGCCCACAGGCAGGTATGAGATCCGGA...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCTCTTCGGCACTCACATaGCCAATCCAAAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETSSALT*PIQRLW
Trigger: CCACAGCCTTTGGATTGGGCATGTGAGTGCCGAAGA...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTACCATGTGTTGCCAGCTaGTGGGCTGAAGGCCTCTAT +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLPCVAS*WAEGLY
Trigger: ATAGAGGCCTTCAGCCCAGCAGCTGGCAACACATGG...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGCCATGTGTTGCCAGCTaGTGGGCTGAAGGCCTCTAT +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWPCVAS*WAEGLY
Trigger: ATAGAGGCCTTCAGCCCAGCAGCTGGCAACACATGG...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGAAAGCGGCTCTCATTaGCCAGGCACCAGATCTGGT +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNESGSH*PGTRSG
Trigger: ACCAGATCTGGTGCCTGGGCAATGAGAGCCGCTTTC...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCCCAGAAGCTTCACTTTaGCTCCCTTGGCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFPEASL*LPWLHC
Trigger: ACAGTGGAGCCAAGGGAGGCAAAGTGAAGCTTCTGG...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAACAGGAAGCTTGGTCTaGTGTATGGGAGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLTGSLV*CMGARP
Trigger: AGGCCTGGCTCCCATACAGCAGACCAAGCTTCCTGT...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACAGGAAGCTTGGTCTaGTGTATGGGAGCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVETGSLV*CMGARP
Trigger: AGGCCTGGCTCCCATACAGCAGACCAAGCTTCCTGT...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTATGTACCACTCAATGTTaGGTCGGGGTCGGCCTTCAG +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLCTTQC*VGVGLQ
Trigger: CTGAAGGCCGACCCCGACCCAACATTGAGTGGTACA...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGTCTCATACCTGCCTGTaGGCAGTTCCCCATCCTCCT +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWSHTCL*AVPHPP
Trigger: AGGAGGATGGGGAACTGCCCACAGGCAGGTATGAGA...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTATCTCATACCTGCCTGTaGGCAGTTCCCCATCCTCCT +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLSHTCL*AVPHPP
Trigger: AGGAGGATGGGGAACTGCCCACAGGCAGGTATGAGA...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGCCTTTGGTCTCGCACTaGAAAGCCACGCTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWPLVSH*KATLSP
Trigger: TGGAGAGAGCGTGGCTTTCCAGTGCGAGACCAAAGG...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCGCTGAAGTGACTGACTaGGGAAAAGCAGGACCTGAC +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETAEVTD*GKAGPD
Trigger: GTCAGGTCCTGCTTTTCCCCAGTCAGTCACTTCAGC...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCCCATCTCCTGCACATTaGCGATGTACAGGGTACCGT +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETPSPAH*RCTGYR
Trigger: ACGGTACCCTGTACATCGCCAATGTGCAGGAGATGG...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTCCATCTCCTGCACATTaGCGATGTACAGGGTACCGT +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITPSPAH*RCTGYR
Trigger: ACGGTACCCTGTACATCGCCAATGTGCAGGAGATGG...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTCCAGAAACAGGTAGATaGTATTGGGCTGCAGACCGC +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITPETGR*YWAADR
Trigger: GCGGTCTGCAGCCCAATACCATCTACCTGTTTCTGG...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAAAACCTTGCACCAGCTaGACTGGGCCATCCACAGTC +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLKPCTS*TGPSTV
Trigger: GACTGTGGATGGCCCAGTCCAGCTGGTGCAAGGTTT...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCACAGTACTTTGCTaGCTTGGGGACTGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFSTVLC*LGDCRS
Trigger: GGACCTACAGTCCCCAAGCCAGCAAAGTACTGTGCT...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCAGCACAGTACTTTGCTaGCTTGGGGACTGTAGGTCC +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSSTVLC*LGDCRS
Trigger: GGACCTACAGTCCCCAAGCCAGCAAAGTACTGTGCT...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGCCCAGGCACCAGATCTaGTATTCCGTGATGACCCCA +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWPRHQI*YSVMTP
Trigger: TGGGGTCATCACGGAATACCAGATCTGGTGCCTGGG...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAGTCCATAGGAAGGTGTaGGAGAGGGGGTTTCCCTTC +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVEVHRKV*ERGFPF
Trigger: GAAGGGAAACCCCCTCTCCCACACCTTCCTATGGAC...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAATGCCCAGCATGGGCTaGGATACACTGAGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVEMPSMG*DTLRGE
Trigger: TTCCCCTCTCAGTGTATCCCAGCCCATGCTGGGCAT...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAAGTTTAAGCGGGAGTaGCTGAACCACGCTTGGCGA +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETKFKRE*LNHAWR
Trigger: TCGCCAAGCGTGGTTCAGCCACTCCCGCTTAAACTT...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538940.5
CDS-3UTR TCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAACTGCTGCAGATCGATTaGGGTGAAAGCGGCTCTCAT +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVELLQID*GESGSH
Trigger: ATGAGAGCCGCTTTCACCTCAATCGATCTGCAGCAG...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAATCCCCGTGGCACTCATaGTATTCTCAATGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVESPWHS*YSQCPN
Trigger: GTTGGGGCATTGAGAATATCATGAGTGCCACGGGGA...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR TCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAATTGTGGGGAGAGATTaGGGCTCCAGAGGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVEIVGRD*GSRGKE
Trigger: CTCTTTCCCTCTGGAGCCTCAATCTCTCCCCACAAT...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538940.5
CDS-3UTR GCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATTCTTCGGCACTCACATaGCCAATCCAAAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNSSALT*PIQRLW
Trigger: CCACAGCCTTTGGATTGGGCATGTGAGTGCCGAAGA...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCCACATAAGACGTGACTaGAGCCCCAGTTTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSHIRRD*SPSLWV
Trigger: AACCCACAAACTGGGGCTGCAGTCACGTCTTATGTG...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATCCAGAAGCTTCACTTTaGCTCCCTTGGCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNPEASL*LPWLHC
Trigger: ACAGTGGAGCCAAGGGAGGCAAAGTGAAGCTTCTGG...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCCGTCTCAAAGGAAGATaGCTACAGACAGGCCGGTTA +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETRLKGR*LQTGRL
Trigger: TAACCGGCCTGTCTGTAGGCATCTTCCTTTGAGACG...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538940.5
CDS-3UTR GCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCCCTACCCTCTCCCTCTaGAGGATCCAATATGTCCTT +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETPTLSL*RIQYVL
Trigger: AAGGACATATTGGATCCTGCAGAGGGAGAGGGTAGG...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538940.5
CDS-3UTR CCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGTTCTCCCGCCATGTTaGAGGCTACGCACACATACA +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNVLPPC*RLRTHT
Trigger: TGTATGTGTGCGTAGCCTCCAACATGGCGGGAGAAC...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTCCAATCCAAAGGCTGTaGTCACTCCGGATCTCATAC +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITPIQRL*SLRISY
Trigger: GTATGAGATCCGGAGTGACCACAGCCTTTGGATTGG...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGGCTGAAGTGACTGACTaGGGAAAAGCAGGACCTGAC +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWAEVTD*GKAGPD
Trigger: GTCAGGTCCTGCTTTTCCCCAGTCAGTCACTTCAGC...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCGCGGTGATGTTAAGTTaGCCTCTTGGAGACACTGAG +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETAVMLS*PLGDTE
Trigger: CTCAGTGTCTCCAAGAGGCCAACTTAACATCACCGC...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTGCGGTGATGTTAAGTTaGCCTCTTGGAGACACTGAG +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITAVMLS*PLGDTE
Trigger: CTCAGTGTCTCCAAGAGGCCAACTTAACATCACCGC...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATTCTTCCATCGGACACTaGGTTGAGGGTTCCCAGTCA +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNSSIGH*VEGSQS
Trigger: TGACTGGGAACCCTCAACCCAGTGTCCGATGGAAGA...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTACCAGAAACAGGTAGATaGTATTGGGCTGCAGACCGC +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLPETGR*YWAADR
Trigger: GCGGTCTGCAGCCCAATACCATCTACCTGTTTCTGG...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATACCTTGATCTGGATTTaGGTCCCTGGAGGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNTLIWI*VPGGSP
Trigger: AGGACTCCCTCCAGGGACCCAAATCCAGATCAAGGT...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCTTGATCTGGATTTaGGTCCCTGGAGGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVETLIWI*VPGGSP
Trigger: AGGACTCCCTCCAGGGACCCAAATCCAGATCAAGGT...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTACCTCAGGAATGCTCCTaGTCACAGAGAGGCTTTCAG +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLPQECS*SQRGFQ
Trigger: CTGAAAGCCTCTCTGTGACCAGGAGCATTCCTGAGG...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTTGTAGGGAAGAGCCTTaGGTTTCTTCCGGAATCGAG +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITCREEP*VSSGIE
Trigger: CTCGATTCCGGAAGAAACCCAAGGCTCTTCCCTACA...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCTGTAGGGAAGAGCCTTaGGTTTCTTCCGGAATCGAG +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETCREEP*VSSGIE
Trigger: CTCGATTCCGGAAGAAACCCAAGGCTCTTCCCTACA...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCCAACAAGGGTCATCTTaGTTCCTCTCGGCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSQQGSS*FLSAFL
Trigger: CAGAAACGCCGAGAGGAACCAAGATGACCCTTGTTG...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCCAACAAGGGTCATCTTaGTTCCTCTCGGCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETQQGSS*FLSAFL
Trigger: CAGAAACGCCGAGAGGAACCAAGATGACCCTTGTTG...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCAATCGTGGAAACCAATaGGCTTCAGCTAGCCCCACT +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSNRGNQ*ASASPT
Trigger: AGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATT...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAATCGTGGAAACCAATaGGCTTCAGCTAGCCCCACT +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFNRGNQ*ASASPT
Trigger: AGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATT...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR TCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCTGCCTGCATCGCTCTTaGGTGTATGTGACATCATCA +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETCLHRS*VYVTSS
Trigger: TGATGATGTCACATACACTCAAGAGCGATGCAGGCA...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTACTATCACATAAGACGTaGCTGCAGCCCCAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLLSHKT*LQPQFV
Trigger: CACAAACTGGGGCTGCAGTCACGTCTTATGTGATAG...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGCTATCACATAAGACGTaGCTGCAGCCCCAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWLSHKT*LQPQFV
Trigger: CACAAACTGGGGCTGCAGTCACGTCTTATGTGATAG...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR TCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCGCCTTCTCAGCCAATTaGAATCGTGGAAACCAATGG +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETAFSAN*NRGNQW
Trigger: CCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGC...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAGCGAACAAGTTCATCTaGAGCAGCGTTTTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVEANKFI*SSVFSR
Trigger: CCTGCTGAAAACGCTGCTGCAGATGAACTTGTTCGC...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397801.6
CDS-3UTR GCA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCGCACACATACATGCCTaGATCGCTCTTGAGTGTATG +
Preference number: 4 (lower is better)
Translates to: RKGGASSLPSQPIEIVETAHIHA*IALECM
Trigger: CATACACTCAAGAGCGATGCAGGCATGTATGTGTGC...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCGCACACATACATGCCTaGATCGCTCTTGAGTGTATG +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFAHIHA*IALECM
Trigger: CATACACTCAAGAGCGATGCAGGCATGTATGTGTGC...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAACACATAAGACGTGACTaGAGCCCCAGTTTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVEHIRRD*SPSLWV
Trigger: AACCCACAAACTGGGGCTGCAGTCACGTCTTATGTG...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTACTTAGCACAGTACTTTaGTGGCTTGGGGACTGTAGG +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLLSTVL*WLGDCR
Trigger: CCTACAGTCCCCAAGCCAGCAAAGTACTGTGCTAAG...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAACTTAGCACAGTACTTTaGTGGCTTGGGGACTGTAGG +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVELSTVL*WLGDCR
Trigger: CCTACAGTCCCCAAGCCAGCAAAGTACTGTGCTAAG...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCGAGGAGCTAGCTCTCTaGCTTCTCAGCCAATTGAAA +
Preference number: 4 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSEELAL*LLSQLK
Trigger: TTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTC...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR GCA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGTCGTTCCATCTCCTATaGTTCTCTGCGGAGCTCAGT +
Preference number: 4 (lower is better)
Translates to: KKEREELALCLLSQLKSWSFHLL*FSAELS
Trigger: ACTGAGCTCCGCAGAGAAGCATAGGAGATGGAACGA...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538940.5
CDS-3UTR CCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATCCAATCCAAAGGCTGTaGTCACTCCGGATCTCATAC +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNPIQRL*SLRISY
Trigger: GTATGAGATCCGGAGTGACCACAGCCTTTGGATTGG...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTACAACAAGGGTCATCTTaGTTCCTCTCGGCGTTTCTG +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLQQGSS*FLSAFL
Trigger: CAGAAACGCCGAGAGGAACCAAGATGACCCTTGTTG...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAAATCGTGGAAACCAATaGGCTTCAGCTAGCCCCACT +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVENRGNQ*ASASPT
Trigger: AGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATT...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTCCAATATGTCCTTATTaGCAGACGTTCCGCGTTCCT +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITPICPY*QTFRVP
Trigger: AGGAACGCGGAACGTCTGCCAATAAGGACATATTGG...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538940.5
CDS-3UTR CCA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTGGAAAGAGAATCCTCTaGTCGTTCCATCTCCTATGC +
Preference number: 4 (lower is better)
Translates to: QPIEIVETNGLQLAPLITGKRIL*SFHLLC
Trigger: GCATAGGAGATGGAACGACCAGAGGATTCTCTTTCC...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538940.5
CDS-3UTR TCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATTGCCTGCATCGCTCTTaGGTGTATGTGACATCATCA +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNCLHRS*VYVTSS
Trigger: TGATGATGTCACATACACTCAAGAGCGATGCAGGCA...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR GCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGAGGAGCTAGCTCTCTaGCTTCTCAGCCAATTGAAA +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNEELAL*LLSQLK
Trigger: TTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTC...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCCAATTGAAATCGTaGAAACCAATGGGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFSQLKS*KPMGFS
Trigger: GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCT...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAACAAAGGAAAGGGAGGTaGCGATATTCGGGAGTTTCA +
Preference number: 4 (lower is better)
Translates to: ERKGGASSLPSQPIEIVEQRKGR*RYSGVS
Trigger: TGAAACTCCCGAATATCGCCACCTCCCTTTCCTTTG...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543966.5
CDS-3UTR CCA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATAGCCAATTGAAATCGTaGAAACCAATGGGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: KGGASSLPSQPIEIVETNSQLKS*KPMGFS
Trigger: GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCT...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CCA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAAGCCAATTGAAATCGTaGAAACCAATGGGCTTCAGC +
Preference number: 4 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLSQLKS*KPMGFS
Trigger: GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCT...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS GCA 90 bp GGGCGGCGCAGAGCCCGAGAAGCAGCGCCCCGCAGGCTGCGCCGCTaGCCGCGAGGAAGGCGGGCTCCCGCAGCACCCTCGCCAGCCGCA +
Preference number: 5 (lower is better)
Translates to: GRRRAREAAPRRLRR*PRGRRAPAAPSPAA
Trigger: TGCGGCTGGCGAGGGTGCTGCGGGAGCCCGCCTTCCTCGCGGGCAGCGGCGCAGCCTGCGGGGCGCTGCTTCTCGGGCTCTGCGCCGCCC
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000527196.5
ENST00000538940.5
CDS GCA 90 bp GCGCCCACCTCCAGCCCGGGCTCCAGGTCCGGCGGGGACGGCAGCTaGACCAGCACTGGGGCACTGGGCACGCCCACGCCTGCGCTGGTG +
Preference number: 5 (lower is better)
Translates to: APTSSPGSRSGGDGS*TSTGALGTPTPALV
Trigger: CACCAGCGCAGGCGTGGGCGTGCCCAGTGCCCCAGTGCTGGTGCAGCTGCCGTCCCCGCCGGACCTGGAGCCCGGGCTGGAGGTGGGCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 90 bp CCAGTAGAGGGCGGCGCAGAGCCCGAGAAGCAGCGCCCCGCAGGCTaGGCCGCTGCCCGCGAGGAAGGCGGGCTCCCGCAGCACCCTCGC +
Preference number: 5 (lower is better)
Translates to: PVEGGAEPEKQRPAG*AAAREEGGLPQHPR
Trigger: GCGAGGGTGCTGCGGGAGCCCGCCTTCCTCGCGGGCAGCGGCGCAGCCTGCGGGGCGCTGCTTCTCGGGCTCTGCGCCGCCCTCTACTGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000527196.5
ENST00000538940.5
CDS GCA 90 bp GGACGGCAGCTGCACCAGCACTGGGGCACTGGGCACGCCCACGCCTaGGCTGGTGGCCGCCGCGACCAGGGTTCGATAGAGGAGACCGGG +
Preference number: 5 (lower is better)
Translates to: GRQLHQHWGTGHAHA*AGGRRDQGSIEETG
Trigger: CCCGGTCTCCTCTATCGAACCCTGGTCGCGGCGGCCACCAGCGCAGGCGTGGGCGTGCCCAGTGCCCCAGTGCTGGTGCAGCTGCCGTCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CCA 90 bp GCTGCACCAGCACTGGGGCACTGGGCACGCCCACGCCTGCGCTGGTaGCCGCCGCGACCAGGGTTCGATAGAGGAGACCGGGCACCAGTC +
Preference number: 5 (lower is better)
Translates to: AAPALGHWARPRLRW*PPRPGFDRGDRAPV
Trigger: GACTGGTGCCCGGTCTCCTCTATCGAACCCTGGTCGCGGCGGCCACCAGCGCAGGCGTGGGCGTGCCCAGTGCCCCAGTGCTGGTGCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CCA 90 bp GCAGCTGCACCAGCACTGGGGCACTGGGCACGCCCACGCCTGCGCTaGTGGCCGCCGCGACCAGGGTTCGATAGAGGAGACCGGGCACCA +
Preference number: 5 (lower is better)
Translates to: AAAPALGHWARPRLR*WPPRPGFDRGDRAP
Trigger: TGGTGCCCGGTCTCCTCTATCGAACCCTGGTCGCGGCGGCCACCAGCGCAGGCGTGGGCGTGCCCAGTGCCCCAGTGCTGGTGCAGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CCA 90 bp GCGGCAGGGCAACGTGGCGGGCTCGCCTCGGGAGACCAGCAGATCTaGCGGCTGCTCCACGATGCGGGGCATAGCGTCCTCCGGTCCTAC +
Preference number: 5 (lower is better)
Translates to: AAGQRGGLASGDQQI*RLLHDAGHSVLRSY
Trigger: GTAGGACCGGAGGACGCTATGCCCCGCATCGTGGAGCAGCCGCCAGATCTGCTGGTCTCCCGAGGCGAGCCCGCCACGTTGCCCTGCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS TCA 90 bp TCCTCTCGGCGTTTCTGTCCTGGCCTTTGGCTCTGGCTCCGGCTCTaGCTCCGACTCCGGCTCCGGCCAGGGCCCCGGGAGCCCCTAGAG +
Preference number: 5 (lower is better)
Translates to: SSRRFCPGLWLWLRL*LRLRLRPGPREPLE
Trigger: CTCTAGGGGCTCCCGGGGCCCTGGCCGGAGCCGGAGTCGGAGTCAGAGCCGGAGCCAGAGCCAAAGGCCAGGACAGAAACGCCGAGAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000397801.6
ENST00000525448.5
ENST00000525482.5
ENST00000527196.5
ENST00000527245.5
ENST00000529658.5
ENST00000538940.5
ENST00000543966.5
CDS GCA 90 bp GGCAACGTGGCGGGCTCGCCTCGGGAGACCAGCAGATCTGGCGGCTaGTCCACGATGCGGGGCATAGCGTCCTCCGGTCCTACCCTTGAC +
Preference number: 5 (lower is better)
Translates to: GNVAGSPRETSRSGG*STMRGIASSGPTLD
Trigger: GTCAAGGGTAGGACCGGAGGACGCTATGCCCCGCATCGTGGAGCAGCCGCCAGATCTGCTGGTCTCCCGAGGCGAGCCCGCCACGTTGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 90 bp GTATGGGAGCCAGGCCTCTTCATCTGGGTGGAGCACCCGCTGGGCTaGCAGGGGCACGGCCTGGACCGCTTTCCTCTCCCCACTGCGCTC +
Preference number: 5 (lower is better)
Translates to: VWEPGLFIWVEHPLG*QGHGLDRFPLPTAL
Trigger: GAGCGCAGTGGGGAGAGGAAAGCGGTCCAGGCCGTGCCCCTGGCAGCCCAGCGGGTGCTCCACCCAGATGAAGAGGCCTGGCTCCCATAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000397801.6
ENST00000524971.1
ENST00000525304.5
ENST00000525448.5
ENST00000525482.5
ENST00000527196.5
ENST00000527245.5
ENST00000529658.5
ENST00000538940.5
ENST00000543966.5
CDS CCA 90 bp AGTGGCGGTGGTGTTGGGGTGGGAGGTGGCCATGCTCCCTCCACCTaGGGCGTCAGCGGGGCGGAAGAAGAGTGGCCTGTCGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: SGGGVGVGGGHAPST*GVSGAEEEWPVGGG
Trigger: ACCTCCACCGACAGGCCACTCTTCTTCCGCCCCGCTGACGCCCCAGGTGGAGGGAGCATGGCCACCTCCCACCCCAACACCACCGCCACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527245.5
ENST00000531888.1
CDS GCA 90 bp CCACTTCCAGCGAGGCGTTTCTGCTCGCTGCTGCCCCCAGGTAGTTaGGAGCCACGCAAGTGTAGACACCTTCGTCCGGCCGCGCGCGGC +
Preference number: 5 (lower is better)
Translates to: PLPARRFCSLLPPGS*EPRKCRHLRPAARG
Trigger: GCCGCGCGCGGCCGGACGAAGGTGTCTACACTTGCGTGGCTCGCAACTACCTGGGGGCAGCAGCGAGCAGAAACGCCTCGCTGGAAGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 90 bp GTCCAGGACACCTGCAGGGTCCGGGGTCCCAGGACTATGGGCTCCTaGAGGCGCACAGCCACTTCCGCCAGTCCCTGCTGGCCTCTCCAT +
Preference number: 5 (lower is better)
Translates to: VQDTCRVRGPRTMGS*RRTATSASPCWPLH
Trigger: ATGGAGAGGCCAGCAGGGACTGGCGGAAGTGGCTGTGCGCCTGCAGGAGCCCATAGTCCTGGGACCCCGGACCCTGCAGGTGTCCTGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CCA 90 bp CATCCACAGTCCAGGACACCTGCAGGGTCCGGGGTCCCAGGACTATaGGCTCCTGCAGGCGCACAGCCACTTCCGCCAGTCCCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: HPQSRTPAGSGVPGL*APAGAQPLPPVPAG
Trigger: GCCAGCAGGGACTGGCGGAAGTGGCTGTGCGCCTGCAGGAGCCCATAGTCCTGGGACCCCGGACCCTGCAGGTGTCCTGGACTGTGGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CCA 90 bp GCACCCAAGCCAGCAGGCCTCGCTTCACGGATGCCCAGCATGGGCTaGGATACACTGAGAGGGGAACTCGGCCCAAGGGGCACCCTCCTG +
Preference number: 5 (lower is better)
Translates to: APKPAGLASRMPSMG*DTLRGELGPRGTLL
Trigger: CAGGAGGGTGCCCCTTGGGCCGAGTTCCCCTCTCAGTGTATCCCAGCCCATGCTGGGCATCCGTGAAGCGAGGCCTGCTGGCTTGGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000397801.6
ENST00000524971.1
ENST00000525304.5
ENST00000525448.5
ENST00000525482.5
ENST00000527196.5
ENST00000527245.5
ENST00000528144.5
ENST00000528820.5
ENST00000529658.5
ENST00000538940.5
ENST00000543966.5
CDS CCA 90 bp CCCCTGGAAGAGTTGCTGCCGGCCGTGGAACATGTGCTGGTGCCCTaGCCCCGGGACAGGAAGCTTGGTCTGCTGTATGGGAGCCAGGCC +
Preference number: 5 (lower is better)
Translates to: PLEELLPAVEHVLVP*PRDRKLGLLYGSQA
Trigger: GGCCTGGCTCCCATACAGCAGACCAAGCTTCCTGTCCCGGGGCCAGGGCACCAGCACATGTTCCACGGCCGGCAGCAACTCTTCCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000397801.6
ENST00000524971.1
ENST00000525304.5
ENST00000525448.5
ENST00000525482.5
ENST00000527196.5
ENST00000527245.5
ENST00000529658.5
ENST00000538940.5
ENST00000543966.5
CDS CCA 90 bp TCGTGGCGTCTTAGAGGCAAACGTCATCCAGATCCCGCCCCGTCTTaGCCCGCAGCCCTCCCTAGTCCTGGCAGCTCCTCGAGTCGCCCC +
Preference number: 5 (lower is better)
Translates to: SWRLRGKRHPDPAPS*PAALPSPGSSSSRP
Trigger: GGGGCGACTCGAGGAGCTGCCAGGACTAGGGAGGGCTGCGGGCCAAGACGGGGCGGGATCTGGATGACGTTTGCCTCTAAGACGCCACGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000525448.5
ENST00000527245.5
ENST00000529658.5
ENST00000531545.5
CDS CCA 90 bp GCACCCAAGCCAGCAGGCCTCGCTTCACGGATGCCCAGCATGGGCTaGGATACACTGAGAGGGGAACTCGGCCCAAGGGGCACCCTCCGT +
Preference number: 5 (lower is better)
Translates to: APKPAGLASRMPSMG*DTLRGELGPRGTLR
Trigger: ACGGAGGGTGCCCCTTGGGCCGAGTTCCCCTCTCAGTGTATCCCAGCCCATGCTGGGCATCCGTGAAGCGAGGCCTGCTGGCTTGGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531075.5
CDS GCA 90 bp AGGACTATGGGCTCCTGCAGGCGCACAGCCACTTCCGCCAGTCCCTaGTGGCCTCTCCATGGGTCCTCCACTGGCCTAGAGGGGCTGCTA +
Preference number: 5 (lower is better)
Translates to: RTMGSCRRTATSASP*WPLHGSSTGLEGLL
Trigger: TAGCAGCCCCTCTAGGCCAGTGGAGGACCCATGGAGAGGCCAGCAGGGACTGGCGGAAGTGGCTGTGCGCCTGCAGGAGCCCATAGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CCA 90 bp ACCCTTGACCCGTTGAGAGAGGGATCGCCGGGAGGCAGCAGGGTGTaGTTGAGCGCCGCCAGCGAGGAGTTGAAGCCCAAGAGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: TLDPLREGSPGGSRV*LSAASEELKPKSSS
Trigger: CGAGCTGCTCTTGGGCTTCAACTCCTCGCTGGCGGCGCTCAACCACACCCTGCTGCCTCCCGGCGATCCCTCTCTCAACGGGTCAAGGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397801.6
CDS TCA 90 bp CAGCAGGCCTCGCTTCACGGATGCCCAGCATGGGCTGGGATACACTaGGAGGGGAACTCGGCCCAAGGGGCACCCTCCTGGGCATCTGAT +
Preference number: 5 (lower is better)
Translates to: QQASLHGCPAWAGIH*EGNSAQGAPSWASD
Trigger: ATCAGATGCCCAGGAGGGTGCCCCTTGGGCCGAGTTCCCCTCTCAGTGTATCCCAGCCCATGCTGGGCATCCGTGAAGCGAGGCCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000397801.6
ENST00000524971.1
ENST00000525304.5
ENST00000525448.5
ENST00000525482.5
ENST00000527196.5
ENST00000528144.5
ENST00000528820.5
ENST00000529658.5
ENST00000538940.5
ENST00000543966.5
CDS TCA 90 bp CAGCAGGCCTCGCTTCACGGATGCCCAGCATGGGCTGGGATACACTaGGAGGGGAACTCGGCCCAAGGGGCACCCTCCTGCAATGACAGG +
Preference number: 5 (lower is better)
Translates to: QQASLHGCPAWAGIH*EGNSAQGAPSCNDR
Trigger: CCTGTCATTGCAGGAGGGTGCCCCTTGGGCCGAGTTCCCCTCTCAGTGTATCCCAGCCCATGCTGGGCATCCGTGAAGCGAGGCCTGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527245.5
CDS GCA 90 bp AGCTGCTGGAGCCCCTGGAAGAGTTGCTGCCGGCCGTGGAACATGTaGTGGTGCCCTGGCCCCGGGACAGGAAGCTTGGTCTGCTGTATG +
Preference number: 5 (lower is better)
Translates to: SCWSPWKSCCRPWNM*WCPGPGTGSLVCCM
Trigger: CATACAGCAGACCAAGCTTCCTGTCCCGGGGCCAGGGCACCAGCACATGTTCCACGGCCGGCAGCAACTCTTCCAGGGGCTCCAGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000397801.6
ENST00000525304.5
ENST00000525448.5
ENST00000525482.5
ENST00000527196.5
ENST00000527245.5
ENST00000529658.5
ENST00000538940.5
ENST00000543966.5
CDS CCA 90 bp GCAGGGCAGCCACACGGAGGAGCCAAGCACCAGCGTCTGATTGGCTaGTCCCTGGAGGATGACAGGAGGCAGCCCATCCAAAGAGGCTCC +
Preference number: 5 (lower is better)
Translates to: AGQPHGGAKHQRLIG*SLEDDRRQPIQRGS
Trigger: GGAGCCTCTTTGGATGGGCTGCCTCCTGTCATCCTCCAGGGACCAGCCAATCAGACGCTGGTGCTTGGCTCCTCCGTGTGGCTGCCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CCA 90 bp TGCTGGAGCCCCTGGAAGAGTTGCTGCCGGCCGTGGAACATGTGCTaGTGCCCTGGCCCCGGGACAGGAAGCTTGGTCTGCTGTATGGGA +
Preference number: 5 (lower is better)
Translates to: CWSPWKSCCRPWNMC*CPGPGTGSLVCCMG
Trigger: TCCCATACAGCAGACCAAGCTTCCTGTCCCGGGGCCAGGGCACCAGCACATGTTCCACGGCCGGCAGCAACTCTTCCAGGGGCTCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000397801.6
ENST00000525304.5
ENST00000525448.5
ENST00000525482.5
ENST00000527196.5
ENST00000527245.5
ENST00000529658.5
ENST00000538940.5
ENST00000543966.5
CDS TCA 90 bp TCCCCCTGCAGCCACTGCCCATCCTTCTTCCATCGGACACTGGGTTaGGGGTTCCCAGTCACTCTGCAGGGCAGCCACACGGAGGAGCCA +
Preference number: 5 (lower is better)
Translates to: SPCSHCPSFFHRTLG*GFPVTLQGSHTEEP
Trigger: TGGCTCCTCCGTGTGGCTGCCCTGCAGAGTGACTGGGAACCCTCAACCCAGTGTCCGATGGAAGAAGGATGGGCAGTGGCTGCAGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS TCA 90 bp GTCCATAGGAAGGTGTGGGAGAGGGGGTTTCCCTTCGGGATGGGGTaGCCAGGCACCCTCCACTGGAGCTGGGCTCCGTCAGGTGACTTC +
Preference number: 5 (lower is better)
Translates to: VHRKVWERGFPFGMG*PGTLHWSWAPSGDF
Trigger: GAAGTCACCTGACGGAGCCCAGCTCCAGTGGAGGGTGCCTGGTCACCCCATCCCGAAGGGAAACCCCCTCTCCCACACCTTCCTATGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000397801.6
ENST00000524971.1
ENST00000525304.5
ENST00000525448.5
ENST00000525482.5
ENST00000526551.5
ENST00000527196.5
ENST00000527245.5
ENST00000528144.5
ENST00000528820.5
ENST00000529658.5
ENST00000538940.5
ENST00000543966.5
CDS GCA 90 bp GGGCTGCAGACCGCTGACTGTGTGTGTCTCCAGCTGCACGCCATCTaGCACAGTACGCCATGTGTTGCCAGCTGCTGGGCTGAAGGCCTC +
Preference number: 5 (lower is better)
Translates to: GLQTADCVCLQLHAI*HSTPCVASCWAEGL
Trigger: GAGGCCTTCAGCCCAGCAGCTGGCAACACATGGCGTACTGTGGCAGATGGCGTGCAGCTGGAGACACACACAGTCAGCGGTCTGCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 90 bp CTTCCTCCCTCAGGGCCTGCTACCCTCCAAGACACCCGGAAACCTTaGACCAGCTGGACTGGGCCATCCACAGTCCAGGACACCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LPPSGPATLQDTRKP*TSWTGPSTVQDTCR
Trigger: CCTGCAGGTGTCCTGGACTGTGGATGGCCCAGTCCAGCTGGTGCAAGGTTTCCGGGTGTCTTGGAGGGTAGCAGGCCCTGAGGGAGGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 90 bp ACCGGGCACCAGTCCTCGGAGCATTGCGGAGCGTGCCCAGCCTGCTaGAGATCGATTGAGGTGAAAGCGGCTCTCATTGCCCAGGCACCA +
Preference number: 5 (lower is better)
Translates to: TGHQSSEHCGACPAC*RSIEVKAALIAQAP
Trigger: TGGTGCCTGGGCAATGAGAGCCGCTTTCACCTCAATCGATCTGCAGCAGGCTGGGCACGCTCCGCAATGCTCCGAGGACTGGTGCCCGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 90 bp GAGACCGGGCACCAGTCCTCGGAGCATTGCGGAGCGTGCCCAGCCTaGTGCAGATCGATTGAGGTGAAAGCGGCTCTCATTGCCCAGGCA +
Preference number: 5 (lower is better)
Translates to: ETGHQSSEHCGACPA*CRSIEVKAALIAQA
Trigger: TGCCTGGGCAATGAGAGCCGCTTTCACCTCAATCGATCTGCAGCAGGCTGGGCACGCTCCGCAATGCTCCGAGGACTGGTGCCCGGTCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 90 bp CTGGGTCAATGGTGCTATAGACAGGACCCTCGCCAGGGGCGGCCGTaGCCCTGGCCGTCTGAGCTAGATACAGGGAGATTCCCGCTTCGT +
Preference number: 5 (lower is better)
Translates to: LGQWCYRQDPRQGRP*PWPSELDTGRFPLR
Trigger: ACGAAGCGGGAATCTCCCTGTATCTAGCTCAGACGGCCAGGGGCACGGCCGCCCCTGGCGAGGGTCCTGTCTATAGCACCATTGACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397801.6
ENST00000525482.5
ENST00000527196.5
ENST00000538940.5
ENST00000543966.5
CDS GCA 90 bp TGGAACATGTGCTGGTGCCCTGGCCCCGGGACAGGAAGCTTGGTCTaGTGTATGGGAGCCAGGCCTCTTCATCTGGGTGGAGCACCCGCT +
Preference number: 5 (lower is better)
Translates to: WNMCWCPGPGTGSLV*CMGARPLHLGGAPA
Trigger: AGCGGGTGCTCCACCCAGATGAAGAGGCCTGGCTCCCATACAGCAGACCAAGCTTCCTGTCCCGGGGCCAGGGCACCAGCACATGTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000397801.6
ENST00000524971.1
ENST00000525304.5
ENST00000525448.5
ENST00000525482.5
ENST00000527196.5
ENST00000527245.5
ENST00000529658.5
ENST00000538940.5
ENST00000543966.5
CDS GCA 90 bp CTGGGTCAATGGTGCTATAGACAGGACCCTCGCCAGGGGCGGCCGTaGCCCTGGCCGTCTGAGCTAGATACAGGGAGATTCCCGCTTCTG +
Preference number: 5 (lower is better)
Translates to: LGQWCYRQDPRQGRP*PWPSELDTGRFPLL
Trigger: CAGAAGCGGGAATCTCCCTGTATCTAGCTCAGACGGCCAGGGGCACGGCCGCCCCTGGCGAGGGTCCTGTCTATAGCACCATTGACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000527245.5
ENST00000529658.5
ENST00000534598.5
CDS GCA 90 bp CTGGGTCAATGGTGCTATAGACAGGACCCTCGCCAGGGGCGGCCGTaGCCCTGGCCGTCTGAGCTAGATACAGGGAGATTCCCGCTTCTC +
Preference number: 5 (lower is better)
Translates to: LGQWCYRQDPRQGRP*PWPSELDTGRFPLL
Trigger: GAGAAGCGGGAATCTCCCTGTATCTAGCTCAGACGGCCAGGGGCACGGCCGCCCCTGGCGAGGGTCCTGTCTATAGCACCATTGACCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525448.5
CDS TCA 90 bp CTTTTATCTCCAGCAGGGCCTTGGCCAGGATGCTGCCAGCCACACTaGCAGCCTGGCACACGTAGTACCCAGCATCCCCACGCTGCACCG +
Preference number: 5 (lower is better)
Translates to: LLSPAGPWPGCCQPH*QPGTRSTQHPHAAP
Trigger: CGGTGCAGCGTGGGGATGCTGGGTACTACGTGTGCCAGGCTGTCAGTGTGGCTGGCAGCATCCTGGCCAAGGCCCTGCTGGAGATAAAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 90 bp CTGGGTCACCAACTGGGGTGGGACGTGAACACTGAGGGAGCCAGATaGTTCAGCGCGGCCCACACTGTTCTCCGCCACACAGGTGTACGT +
Preference number: 5 (lower is better)
Translates to: LGHQLGWDVNTEGAR*FSAAHTVLRHTGVR
Trigger: ACGTACACCTGTGTGGCGGAGAACAGTGTGGGCCGCGCTGAAGCATCTGGCTCCCTCAGTGTTCACGTCCCACCCCAGTTGGTGACCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 90 bp GACCAGGGTTCGATAGAGGAGACCGGGCACCAGTCCTCGGAGCATTaGGGAGCGTGCCCAGCCTGCTGCAGATCGATTGAGGTGAAAGCG +
Preference number: 5 (lower is better)
Translates to: DQGSIEETGHQSSEH*GACPACCRSIEVKA
Trigger: CGCTTTCACCTCAATCGATCTGCAGCAGGCTGGGCACGCTCCGCAATGCTCCGAGGACTGGTGCCCGGTCTCCTCTATCGAACCCTGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CCA 90 bp GGAATGCTCCTGGTCACAGAGAGGCTTTCAGCCCCCAGCCCCTCCTaGCCTTGGGCTTGCACCTTGATCTGGATTTGGGTCCCTGGAGGG +
Preference number: 5 (lower is better)
Translates to: GMLLVTERLSAPSPS*PWACTLIWIWVPGG
Trigger: CCCTCCAGGGACCCAAATCCAGATCAAGGTGCAAGCCCAAGGCCAGGAGGGGCTGGGGGCTGAAAGCCTCTCTGTGACCAGGAGCATTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CCA 90 bp ATGCCCCAACAAGGGTCATCTTGGTTCCTCTCGGCGTTTCTGTCCTaGCCTTTGGCTCTGGCTCCGGCTCTGACTCCGACTCCGGCTCCG +
Preference number: 5 (lower is better)
Translates to: MPQQGSSWFLSAFLS*PLALAPALTPTPAP
Trigger: CGGAGCCGGAGTCGGAGTCAGAGCCGGAGCCAGAGCCAAAGGCCAGGACAGAAACGCCGAGAGGAACCAAGATGACCCTTGTTGGGGCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397801.6
ENST00000525448.5
ENST00000525482.5
ENST00000527196.5
ENST00000527245.5
ENST00000529658.5
ENST00000538940.5
ENST00000543966.5
CDS CCA 90 bp CAATGGTGCTATAGACAGGACCCTCGCCAGGGGCGGCCGTGCCCCTaGCCGTCTGAGCTAGATACAGGGAGATTCCCGCTTCTGCAGAGA +
Preference number: 5 (lower is better)
Translates to: QWCYRQDPRQGRPCP*PSELDTGRFPLLQR
Trigger: TCTCTGCAGAAGCGGGAATCTCCCTGTATCTAGCTCAGACGGCCAGGGGCACGGCCGCCCCTGGCGAGGGTCCTGTCTATAGCACCATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527245.5
ENST00000529658.5
ENST00000534598.5
CDS CCA 90 bp CCACGCCTAGGCCCCGGTCCCAGTTCCACCACTCAGGCTGCACCCTaGACCCATTTCATCAGAATTTCTCGGGGGTGGGACTCAGGTGTC +
Preference number: 5 (lower is better)
Translates to: PRLGPGPSSTTQAAP*THFIRISRGWDSGV
Trigger: GACACCTGAGTCCCACCCCCGAGAAATTCTGATGAAATGGGTCCAGGGTGCAGCCTGAGTGGTGGAACTGGGACCGGGGCCTAGGCGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527245.5
ENST00000528068.5
ENST00000532472.1
CDS CCA 90 bp CAATGGTGCTATAGACAGGACCCTCGCCAGGGGCGGCCGTGCCCCTaGCCGTCTGAGCTAGATACAGGGAGATTCCCGCTTCTCAGAGAG +
Preference number: 5 (lower is better)
Translates to: QWCYRQDPRQGRPCP*PSELDTGRFPLLRE
Trigger: CTCTCTGAGAAGCGGGAATCTCCCTGTATCTAGCTCAGACGGCCAGGGGCACGGCCGCCCCTGGCGAGGGTCCTGTCTATAGCACCATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525448.5
CDS TCA 90 bp CAGCAGGCCTCGCTTCACGGATGCCCAGCATGGGCTGGGATACACTaGGAGGGGAACTCGGCCCAAGGGGCACCCTCCGTTGTAATATCT +
Preference number: 5 (lower is better)
Translates to: QQASLHGCPAWAGIH*EGNSAQGAPSVVIS
Trigger: AGATATTACAACGGAGGGTGCCCCTTGGGCCGAGTTCCCCTCTCAGTGTATCCCAGCCCATGCTGGGCATCCGTGAAGCGAGGCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531075.5
CDS TCA 90 bp CGGAGCATTGCGGAGCGTGCCCAGCCTGCTGCAGATCGATTGAGGTaGAAGCGGCTCTCATTGCCCAGGCACCAGATCTGGTATTCCGTG +
Preference number: 5 (lower is better)
Translates to: RSIAERAQPAADRLR*KRLSLPRHQIWYSV
Trigger: CACGGAATACCAGATCTGGTGCCTGGGCAATGAGAGCCGCTTTCACCTCAATCGATCTGCAGCAGGCTGGGCACGCTCCGCAATGCTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 90 bp ATCATCACGGAGGACTGCCACTTCCAGCGAGGCGTTTCTGCTCGCTaGTGCCCCCAGGTAGTTGCGAGCCACGCAAGTGTAGACACCTTC +
Preference number: 5 (lower is better)
Translates to: IITEDCHFQRGVSAR*CPQVVASHASVDTF
Trigger: GAAGGTGTCTACACTTGCGTGGCTCGCAACTACCTGGGGGCAGCAGCGAGCAGAAACGCCTCGCTGGAAGTGGCAGTCCTCCGTGATGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 90 bp AGTACTGCTGGCTCCCCCACTGCCACCACCACGTTTCCAGGAGACTaGCGGAAATCATCACGGAGGACTGCCACTTCCAGCGAGGCGTTT +
Preference number: 5 (lower is better)
Translates to: STAGSPTATTTFPGD*RKSSRRTATSSEAF
Trigger: AAACGCCTCGCTGGAAGTGGCAGTCCTCCGTGATGATTTCCGGCAGTCTCCTGGAAACGTGGTGGTGGCAGTGGGGGAGCCAGCAGTACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 90 bp TCGATAGAGGAGACCGGGCACCAGTCCTCGGAGCATTGCGGAGCGTaGCCAGCCTGCTGCAGATCGATTGAGGTGAAAGCGGCTCTCATT +
Preference number: 5 (lower is better)
Translates to: SIEETGHQSSEHCGA*PACCRSIEVKAALI
Trigger: AATGAGAGCCGCTTTCACCTCAATCGATCTGCAGCAGGCTGGGCACGCTCCGCAATGCTCCGAGGACTGGTGCCCGGTCTCCTCTATCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 90 bp TACTTGTCCACGCCTAGGCCCCGGTCCCAGTTCCACCACTCAGGCTaGACCCTGGACCCATTTCATCAGAATTTCTCGGGGGTGGGACTC +
Preference number: 5 (lower is better)
Translates to: YLSTPRPRSQFHHSG*TLDPFHQNFSGVGL
Trigger: GAGTCCCACCCCCGAGAAATTCTGATGAAATGGGTCCAGGGTGCAGCCTGAGTGGTGGAACTGGGACCGGGGCCTAGGCGTGGACAAGTA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000527245.5
ENST00000528068.5
ENST00000532472.1
CDS CCA 90 bp CAATGGTGCTATAGACAGGACCCTCGCCAGGGGCGGCCGTGCCCCTaGCCGTCTGAGCTAGATACAGGGAGATTCCCGCTTCGTTGTAAT +
Preference number: 5 (lower is better)
Translates to: QWCYRQDPRQGRPCP*PSELDTGRFPLRCN
Trigger: ATTACAACGAAGCGGGAATCTCCCTGTATCTAGCTCAGACGGCCAGGGGCACGGCCGCCCCTGGCGAGGGTCCTGTCTATAGCACCATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000397801.6
ENST00000525482.5
ENST00000527196.5
ENST00000538940.5
ENST00000543966.5
CDS CCA 90 bp GGGCTAAACGGGGTTTCAGGAGTTGGAGTCATACCACTGTCCCCCTaGCTCCACTCTGGAGGAGCGTACTGGCTCCAGGGACCCAGATCT +
Preference number: 5 (lower is better)
Translates to: GLNGVSGVGVIPLSP*LHSGGAYWLQGPRS
Trigger: AGATCTGGGTCCCTGGAGCCAGTACGCTCCTCCAGAGTGGAGCCAGGGGGACAGTGGTATGACTCCAACTCCTGAAACCCCGTTTAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534598.5
CDS TCA 90 bp CGGAGGAGCCAAGCACCAGCGTCTGATTGGCTGGTCCCTGGAGGATaGCAGGAGGCAGCCCATCCAAAGAGGCTCCTTTTATCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: RRSQAPASDWLVPGG*QEAAHPKRLLLSPA
Trigger: TGCTGGAGATAAAAGGAGCCTCTTTGGATGGGCTGCCTCCTGTCATCCTCCAGGGACCAGCCAATCAGACGCTGGTGCTTGGCTCCTCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS TCA 90 bp GTCCTCGGAGCATTGCGGAGCGTGCCCAGCCTGCTGCAGATCGATTaGGGTGAAAGCGGCTCTCATTGCCCAGGCACCAGATCTGGTATT +
Preference number: 5 (lower is better)
Translates to: VLGALRSVPSLLQID*GESGSHCPGTRSGI
Trigger: AATACCAGATCTGGTGCCTGGGCAATGAGAGCCGCTTTCACCTCAATCGATCTGCAGCAGGCTGGGCACGCTCCGCAATGCTCCGAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS TCA 90 bp CAGGTGACTTCTCTCAGGCATTGGCGGGCACCACTCCTCTGGCTCTaGGCTGGGATCAAAGAGGCAGGAGAGAAGGAAAGGGCTCAGCTG +
Preference number: 5 (lower is better)
Translates to: QVTSLRHWRAPLLWL*AGIKEAGEKERAQL
Trigger: CAGCTGAGCCCTTTCCTTCTCTCCTGCCTCTTTGATCCCAGCTCAGAGCCAGAGGAGTGGTGCCCGCCAATGCCTGAGAGAAGTCACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524971.1
CDS GCA 90 bp TCTGAGCTGGGATCAAAGAGGCAGGAGAGAAGGAAAGGGCTCAGCTaGTTCCATACCTTCCCGTTGGCCTTCCTGCTGCCCCCTCCCCTT +
Preference number: 5 (lower is better)
Translates to: SELGSKRQERRKGLS*FHTFPLAFLLPPPL
Trigger: AAGGGGAGGGGGCAGCAGGAAGGCCAACGGGAAGGTATGGAAGCAGCTGAGCCCTTTCCTTCTCTCCTGCCTCTTTGATCCCAGCTCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524971.1
CDS-3UTR CAA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCGGCAGCAGGGTGTGGTaGAGCGCCGCCAGCGAGGAG +
Preference number: 5 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFGSRVW*SAASEE
Trigger: CTCCTCGCTGGCGGCGCTCAACCACACCCTGCTGCC...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397801.6
CDS TCA 90 bp CGTCAGCGGGGCGGAAGAAGAGTGGCCTGTCGGTGGAGGTCATCCTaGGGAAATGGGCTAAGAGAATTACCTGGAACTGGCTCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: RQRGGRRVACRWRSS*GNGLRELPGTGSRE
Trigger: CTCTCTGGAGCCAGTTCCAGGTAATTCTCTTAGCCCATTTCCTCAGGATGACCTCCACCGACAGGCCACTCTTCTTCCGCCCCGCTGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527245.5
ENST00000531888.1
CDS CCA 90 bp CTTGCCCCTTCTTTATGGAGATGGTTGCAAAGCCTGGCCTCCTCGTaGCGTCTTAGAGGCAAACGTCATCCAGATCCCGCCCCGTCTTGG +
Preference number: 5 (lower is better)
Translates to: LAPSLWRWLQSLASS*RLRGKRHPDPAPSW
Trigger: CCAAGACGGGGCGGGATCTGGATGACGTTTGCCTCTAAGACGCCACGAGGAGGCCAGGCTTTGCAACCATCTCCATAAAGAAGGGGCAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000525448.5
ENST00000527245.5
ENST00000529658.5
CDS CCA 90 bp CGCCCTTTGAGTGGGCTTTCCGTCCTCGAACTTGCCCCTTCTTTATaGAGATGGTTGCAAAGCCTGGCCTCCTCGTGGCGTCTTAGAGGC +
Preference number: 5 (lower is better)
Translates to: RPLSGLSVLELAPSL*RWLQSLASSWRLRG
Trigger: GCCTCTAAGACGCCACGAGGAGGCCAGGCTTTGCAACCATCTCCATAAAGAAGGGGCAAGTTCGAGGACGGAAAGCCCACTCAAAGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525448.5
ENST00000527245.5
ENST00000529658.5
CDS CCA 90 bp AGAGGCCCTTCTTTATGGAGATGGTTGCAAAGCCTGGCCTCCTCGTaGCGTCTTAGAGGCAAACGTCATCCAGATCCCGCCCCGTCTTGG +
Preference number: 5 (lower is better)
Translates to: RGPSLWRWLQSLASS*RLRGKRHPDPAPSW
Trigger: CCAAGACGGGGCGGGATCTGGATGACGTTTGCCTCTAAGACGCCACGAGGAGGCCAGGCTTTGCAACCATCTCCATAAAGAAGGGCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531545.5
CDS-3UTR CAA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCCCTCCGGTCCTACCCTaGACCCTGGGGACAGGGGGT +
Preference number: 5 (lower is better)
Translates to: RKGGASSLPSQPIEIVETPPVLP*TLGTGG
Trigger: ACCCCCTGTCCCCAGGGTCAAGGGTAGGACCGGAGG...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000538940.5
CDS TCA 90 bp TCTCCTGCACATTGGCGATGTACAGGGTACCGTTGGCCATTGTCTTaGACTGGAGGTCATCCCCCTGCAGCCACTGCCCATCCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: SPAHWRCTGYRWPLS*TGGHPPAATAHPSS
Trigger: GGAAGAAGGATGGGCAGTGGCTGCAGGGGGATGACCTCCAGTTCAAGACAATGGCCAACGGTACCCTGTACATCGCCAATGTGCAGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS TCA 90 bp GGGGGTGGCGCAGAGCGTTCAGACAGGGAAATTGTGGGGAGAGATTaGGGCTCCAGAGGGAAAGAGAATCCTCTGGTCGTTCCATCTCCT +
Preference number: 5 (lower is better)
Translates to: GGGAERSDREIVGRD*GSRGKENPLVVPSP
Trigger: AGGAGATGGAACGACCAGAGGATTCTCTTTCCCTCTGGAGCCTCAATCTCTCCCCACAATTTCCCTGTCTGAACGCTCTGCGCCACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538940.5
CDS GCA 90 bp GTTGCCAGCTGCTGGGCTGAAGGCCTCTATCACATAAGACGTGACTaGAGCCCCAGTTTGTGGGTTGGGCTTCCAGGTCAGGGTAATGCT +
Preference number: 5 (lower is better)
Translates to: VASCWAEGLYHIRRD*SPSLWVGLPGQGNA
Trigger: AGCATTACCCTGACCTGGAAGCCCAACCCACAAACTGGGGCTGCAGTCACGTCTTATGTGATAGAGGCCTTCAGCCCAGCAGCTGGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 90 bp AGTTCAGAGAGGGCATCTGCACAGGTTTCCCCAGAAGCTTCACTTTaGCTCCCTTGGCTCCTGAGGAGAATAGGATGGGGACACCCGGAG +
Preference number: 5 (lower is better)
Translates to: SSERASAQVSPEASL*LPWLLRRIGWGHPE
Trigger: CTCCGGGTGTCCCCATCCTATTCTCCTCAGGAGCCAAGGGAGGCAAAGTGAAGCTTCTGGGGAAACCTGTGCAGATGCCCTCTCTGAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534598.5
CDS CCA 90 bp CCGTCCTCGAACTTGCCCCTTCTTTATGGAGATGGTTGCAAAGCCTaGCCTCCTCGTGGCGTCTTAGAGGCAAACGTCATCCAGATCCCG +
Preference number: 5 (lower is better)
Translates to: PSSNLPLLYGDGCKA*PPRGVLEANVIQIP
Trigger: CGGGATCTGGATGACGTTTGCCTCTAAGACGCCACGAGGAGGCCAGGCTTTGCAACCATCTCCATAAAGAAGGGGCAAGTTCGAGGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525448.5
ENST00000527245.5
ENST00000529658.5
CDS-3UTR CAA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATCCAGTCCTCGGAGCATaGCGGAGCGTGCCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: KGGASSLPSQPIEIVETNPVLGA*RSVPSL
Trigger: CAGGCTGGGCACGCTCCGCAATGCTCCGAGGACTGG...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAACCAGTCCTCGGAGCATaGCGGAGCGTGCCCAGCCTG +
Preference number: 5 (lower is better)
Translates to: ERKGGASSLPSQPIEIVEPVLGA*RSVPSL
Trigger: CAGGCTGGGCACGCTCCGCAATGCTCCGAGGACTGG...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS TCA 90 bp TTCACCTCACATAGGAAAGTCACAGGGGCATCAGCCAGGACCACCTaGTTCACTGGTCTGCGCAGGAATGAGGGACGCTCCAGTACCATG +
Preference number: 5 (lower is better)
Translates to: FTSHRKVTGASARTT*FTGLRRNEGRSSTM
Trigger: CATGGTACTGGAGCGTCCCTCATTCCTGCGCAGACCAGTGAATCAGGTGGTCCTGGCTGATGCCCCTGTGACTTTCCTATGTGAGGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 90 bp TTCTCCGCCACACAGGTGTACGTTCCCTCATCTTCGGCACTCACATaGCCAATCCAAAGGCTGTGGTCACTCCGGATCTCATACCTGCCT +
Preference number: 5 (lower is better)
Translates to: FSATQVYVPSSSALT*PIQRLWSLRISYLP
Trigger: AGGCAGGTATGAGATCCGGAGTGACCACAGCCTTTGGATTGGGCATGTGAGTGCCGAAGATGAGGGAACGTACACCTGTGTGGCGGAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 90 bp GTGGGCTTTCCGTCCTCGAACTTGCCCCTTCTTTATGGAGATGGTTaGAAAGCCTGGCCTCCTCGTGGCGTCTTAGAGGCAAACGTCATC +
Preference number: 5 (lower is better)
Translates to: VGFPSSNLPLLYGDG*KAWPPRGVLEANVI
Trigger: GATGACGTTTGCCTCTAAGACGCCACGAGGAGGCCAGGCTTTGCAACCATCTCCATAAAGAAGGGGCAAGTTCGAGGACGGAAAGCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525448.5
ENST00000527245.5
ENST00000529658.5
CDS GCA 90 bp GGTCGTTCCATCTCCTATGCTTCTCTGCGGAGCTCAGTCCCCACCTaGCTACCCTCTCCCTCTGCAGGATCCAATATGTCCTTATTGGCA +
Preference number: 5 (lower is better)
Translates to: GRSISYASLRSSVPT*LPSPSAGSNMSLLA
Trigger: TGCCAATAAGGACATATTGGATCCTGCAGAGGGAGAGGGTAGGCAGGTGGGGACTGAGCTCCGCAGAGAAGCATAGGAGATGGAACGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538940.5
CDS CCA 90 bp GTGGAGGTCATCCTGAGGAAATGGGCTAAGAGAATTACCTGGAACTaGCTCCAGAGAGGCCCTCTGAGTGCGGGAAGGACACTGGGGAAA +
Preference number: 5 (lower is better)
Translates to: VEVILRKWAKRITWN*LQRGPLSAGRTLGK
Trigger: TTTCCCCAGTGTCCTTCCCGCACTCAGAGGGCCTCTCTGGAGCCAGTTCCAGGTAATTCTCTTAGCCCATTTCCTCAGGATGACCTCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527245.5
ENST00000531888.1
CDS-3UTR CAA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTAGCAGCTCGCTGGAGTaGGAGATGTCCCCGGCCAGA +
Preference number: 5 (lower is better)
Translates to: QPIEIVETNGLQLAPLITSSSLE*EMSPAR
Trigger: TCTGGCCGGGGACATCTCCAACTCCAGCGAGCTGCT...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397801.6
CDS-3UTR CAA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAGCCGCCAGCGAGGAGTaGAAGCCCAAGAGCAGCTCG +
Preference number: 5 (lower is better)
Translates to: ERKGGASSLPSQPIEIVEAASEE*KPKSSS
Trigger: CGAGCTGCTCTTGGGCTTCAACTCCTCGCTGGCGGC...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397801.6
CDS-3UTR CAA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCCCTACCCTTGACCCGTaGAGAGAGGGATCGCCGGGA +
Preference number: 5 (lower is better)
Translates to: RKGGASSLPSQPIEIVETPTLDP*REGSPG
Trigger: TCCCGGCGATCCCTCTCTCAACGGGTCAAGGGTAGG...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397801.6
CDS CCA 90 bp TTGAGTGGGCTTTCCGTCCTCGAACTTGCCCCTTCTTTATGGAGATaGTTGCAAAGCCTGGCCTCCTCGTGGCGTCTTAGAGGCAAACGT +
Preference number: 5 (lower is better)
Translates to: LSGLSVLELAPSLWR*LQSLASSWRLRGKR
Trigger: ACGTTTGCCTCTAAGACGCCACGAGGAGGCCAGGCTTTGCAACCATCTCCATAAAGAAGGGGCAAGTTCGAGGACGGAAAGCCCACTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525448.5
ENST00000527245.5
ENST00000529658.5
CDS CCA 90 bp CCACCTGCCTACCCTCTCCCTCTGCAGGATCCAATATGTCCTTATTaGCAGACGTTCCGCGTTCCTCGTCTCAAAGGAAGATGCCTACAG +
Preference number: 5 (lower is better)
Translates to: PPAYPLPLQDPICPY*QTFRVPRLKGRCLQ
Trigger: CTGTAGGCATCTTCCTTTGAGACGAGGAACGCGGAACGTCTGCCAATAAGGACATATTGGATCCTGCAGAGGGAGAGGGTAGGCAGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538940.5
CDS-3UTR CAA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTAGTTCCCCATCCTCCTaGCGCCAGCGTAGACGAGGT +
Preference number: 5 (lower is better)
Translates to: QPIEIVETNGLQLAPLITSSPSS*RQRRRG
Trigger: ACCTCGTCTACGCTGGCGCAAGGAGGATGGGGAACT...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGTTCCCCATCCTCCTaGCGCCAGCGTAGACGAGGT +
Preference number: 5 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFSSPSS*RQRRRG
Trigger: ACCTCGTCTACGCTGGCGCAAGGAGGATGGGGAACT...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCGCCCCAGTTTGTGGGTaGGGCTTCCAGGTCAGGGTA +
Preference number: 5 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSAPVCG*GFQVRV
Trigger: TACCCTGACCTGGAAGCCCAACCCACAAACTGGGGC...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAAGACACCCGGAAACCTaGCACCAGCTGGACTGGGCC +
Preference number: 5 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLRHPET*HQLDWA
Trigger: GGCCCAGTCCAGCTGGTGCAAGGTTTCCGGGTGTCT...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAATCGTCCGGGTCAGGATaGCTAGGGCAGCAGCTTCCC +
Preference number: 5 (lower is better)
Translates to: ERKGGASSLPSQPIEIVESSGSG*LGQQLP
Trigger: GGGAAGCTGCTGCCCTAGCAATCCTGACCCGGACGA...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CAA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGTCGTCCGGGTCAGGATaGCTAGGGCAGCAGCTTCCC +
Preference number: 5 (lower is better)
Translates to: KKEREELALCLLSQLKSWSSGSG*LGQQLP
Trigger: GGGAAGCTGCTGCCCTAGCAATCCTGACCCGGACGA...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CAA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTATCGTCCGGGTCAGGATaGCTAGGGCAGCAGCTTCCC +
Preference number: 5 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLSSGSG*LGQQLP
Trigger: GGGAAGCTGCTGCCCTAGCAATCCTGACCCGGACGA...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CAA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCTTCACTTTGCCTCCCTaGGCTCCACTGTCCCCCTGG +
Preference number: 5 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFFTLPP*APLSPW
Trigger: CCAGGGGGACAGTGGAGCCAAGGGAGGCAAAGTGAA...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCTTCACTTTGCCTCCCTaGGCTCCACTGTCCCCCTGG +
Preference number: 5 (lower is better)
Translates to: RKGGASSLPSQPIEIVETFTLPP*APLSPW
Trigger: CCAGGGGGACAGTGGAGCCAAGGGAGGCAAAGTGAA...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCGACTTCTCTCAGGCATaGGCGGGCACCACTCCTCTG +
Preference number: 5 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSDFSQA*AGTTPL
Trigger: CAGAGGAGTGGTGCCCGCCAATGCCTGAGAGAAGTC...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CAA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCTCGAGCACGGGGTCCTaGAAGTGGGGGAGTCATCTC +
Preference number: 5 (lower is better)
Translates to: RKGGASSLPSQPIEIVETSSTGS*KWGSHL
Trigger: GAGATGACTCCCCCACTTCAAGGACCCCGTGCTCGA...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CAA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCTTTCTGTCCTGGCCTTaGGCTCTGGCTCCGGCTCTG +
Preference number: 5 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFFLSWP*ALAPAL
Trigger: CAGAGCCGGAGCCAGAGCCAAAGGCCAGGACAGAAA...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CAA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTTTTCTGTCCTGGCCTTaGGCTCTGGCTCCGGCTCTG +
Preference number: 5 (lower is better)
Translates to: QPIEIVETNGLQLAPLITFLSWP*ALAPAL
Trigger: CAGAGCCGGAGCCAGAGCCAAAGGCCAGGACAGAAA...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS TCA 90 bp GGAGGCTACGCACACATACATGCCTGCATCGCTCTTGAGTGTATGTaGCATCATCAGCTTCCCTCCACGGATCGTGATCCTTCCTTCCTC +
Preference number: 5 (lower is better)
Translates to: GGYAHIHACIALECM*HHQLPSTDRDPSFL
Trigger: GAGGAAGGAAGGATCACGATCCGTGGAGGGAAGCTGATGATGTCACATACACTCAAGAGCGATGCAGGCATGTATGTGTGCGTAGCCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS TCA 90 bp GATCTTGTCAGCCTCCATATTCCTGCCCAAATTACACTTCCACCCTaGCACAGCCCTGAGACCTCTGTACCCCAGATCCATCCACCCATC +
Preference number: 5 (lower is better)
Translates to: DLVSLHIPAQITLPP*HSPETSVPQIHPPI
Trigger: GATGGGTGGATGGATCTGGGGTACAGAGGTCTCAGGGCTGTGTCAGGGTGGAAGTGTAATTTGGGCAGGAATATGGAGGCTGACAAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527245.5
CDS CCA 90 bp AAATTGTGGGGAGAGATTGAGGCTCCAGAGGGAAAGAGAATCCTCTaGTCGTTCCATCTCCTATGCTTCTCTGCGGAGCTCAGTCCCCAC +
Preference number: 5 (lower is better)
Translates to: KLWGEIEAPEGKRIL*SFHLLCFSAELSPH
Trigger: GTGGGGACTGAGCTCCGCAGAGAAGCATAGGAGATGGAACGACCAGAGGATTCTCTTTCCCTCTGGAGCCTCAATCTCTCCCCACAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000538940.5
CDS-3UTR CAA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCCGTTCTCCCGCCATGTaGGAGGCTACGCACACATAC +
Preference number: 5 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSRSPAM*EATHTY
Trigger: GTATGTGTGCGTAGCCTCCAACATGGCGGGAGAACG...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCCCATCGGACACTGGGTaGAGGGTTCCCAGTCACTCT +
Preference number: 5 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSPSDTG*RVPSHS
Trigger: AGAGTGACTGGGAACCCTCAACCCAGTGTCCGATGG...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCCCATCGGACACTGGGTaGAGGGTTCCCAGTCACTCT +
Preference number: 5 (lower is better)
Translates to: RKGGASSLPSQPIEIVETPSDTG*RVPSHS
Trigger: AGAGTGACTGGGAACCCTCAACCCAGTGTCCGATGG...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCCCGTTGGCCATTGTCTaGAACTGGAGGTCATCCCCC +
Preference number: 5 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFPLAIV*NWRSSP
Trigger: GGGGGATGACCTCCAGTTCAAGACAATGGCCAACGG...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGGCCCCAGTTTGTGGGTaGGGCTTCCAGGTCAGGGTA +
Preference number: 5 (lower is better)
Translates to: KKEREELALCLLSQLKSWAPVCG*GFQVRV
Trigger: TACCCTGACCTGGAAGCCCAACCCACAAACTGGGGC...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGACTGCAGCCCCAGTTaGTGGGTTGGGCTTCCAGGT +
Preference number: 5 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLDCSPS*WVGLPG
Trigger: ACCTGGAAGCCCAACCCACAAACTGGGGCTGCAGTC...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGGACTGCAGCCCCAGTTaGTGGGTTGGGCTTCCAGGT +
Preference number: 5 (lower is better)
Translates to: KKEREELALCLLSQLKSWDCSPS*WVGLPG
Trigger: ACCTGGAAGCCCAACCCACAAACTGGGGCTGCAGTC...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCCACCTTGATCTGGATTaGGGTCCCTGGAGGGAGTCC +
Preference number: 5 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFHLDLD*GPWRES
Trigger: GGACTCCCTCCAGGGACCCAAATCCAGATCAAGGTG...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTCCCAGAAGCTTCACTTaGCCTCCCTTGGCTCCACTG +
Preference number: 5 (lower is better)
Translates to: QPIEIVETNGLQLAPLITPRSFT*PPLAPL
Trigger: CAGTGGAGCCAAGGGAGGCAAAGTGAAGCTTCTGGG...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCCCCAGAAGCTTCACTTaGCCTCCCTTGGCTCCACTG +
Preference number: 5 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSPRSFT*PPLAPL
Trigger: CAGTGGAGCCAAGGGAGGCAAAGTGAAGCTTCTGGG...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAGACTTCTCTCAGGCATaGGCGGGCACCACTCCTCTG +
Preference number: 5 (lower is better)
Translates to: ERKGGASSLPSQPIEIVEDFSQA*AGTTPL
Trigger: CAGAGGAGTGGTGCCCGCCAATGCCTGAGAGAAGTC...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CAA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATTCGAGCACGGGGTCCTaGAAGTGGGGGAGTCATCTC +
Preference number: 5 (lower is better)
Translates to: KGGASSLPSQPIEIVETNSSTGS*KWGSHL
Trigger: GAGATGACTCCCCCACTTCAAGGACCCCGTGCTCGA...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CAA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAATCGAGCACGGGGTCCTaGAAGTGGGGGAGTCATCTC +
Preference number: 5 (lower is better)
Translates to: ERKGGASSLPSQPIEIVESSTGS*KWGSHL
Trigger: GAGATGACTCCCCCACTTCAAGGACCCCGTGCTCGA...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CAA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTATTTCTGTCCTGGCCTTaGGCTCTGGCTCCGGCTCTG +
Preference number: 5 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLFLSWP*ALAPAL
Trigger: CAGAGCCGGAGCCAGAGCCAAAGGCCAGGACAGAAA...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS GCA 90 bp TGTCCTTATTGGCAGACGTTCCGCGTTCCTCGTCTCAAAGGAAGATaGCTACAGACAGGCCGGTTAGTAGAGGGATCGGGACACAAACTT +
Preference number: 5 (lower is better)
Translates to: CPYWQTFRVPRLKGR*LQTGRLVEGSGHKL
Trigger: AAGTTTGTGTCCCGATCCCTCTACTAACCGGCCTGTCTGTAGGCATCTTCCTTTGAGACGAGGAACGCGGAACGTCTGCCAATAAGGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538940.5
CDS-3UTR CAA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCACACGCGCCCCGTTCTaGTACCACTCAATGTTGGGT +
Preference number: 5 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSTRAPF*YHSMLG
Trigger: ACCCAACATTGAGTGGTACAAGAACGGGGCGCGTGT...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGCCGTTGGCCATTGTCTaGAACTGGAGGTCATCCCCC +
Preference number: 5 (lower is better)
Translates to: KKEREELALCLLSQLKSWPLAIV*NWRSSP
Trigger: GGGGGATGACCTCCAGTTCAAGACAATGGCCAACGG...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATACAGTACGCCATGTGTaGCCAGCTGCTGGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: KGGASSLPSQPIEIVETNTVRHV*PAAGLK
Trigger: CTTCAGCCCAGCAGCTGGCAACACATGGCGTACTGT...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGACAGTACGCCATGTGTaGCCAGCTGCTGGGCTGAAG +
Preference number: 5 (lower is better)
Translates to: KKEREELALCLLSQLKSWTVRHV*PAAGLK
Trigger: CTTCAGCCCAGCAGCTGGCAACACATGGCGTACTGT...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTACACCTTGATCTGGATTaGGGTCCCTGGAGGGAGTCC +
Preference number: 5 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLHLDLD*GPWRES
Trigger: GGACTCCCTCCAGGGACCCAAATCCAGATCAAGGTG...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCCCTTGGGCTTGCACCTaGATCTGGATTTGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: RKGGASSLPSQPIEIVETPWACT*IWIWVP
Trigger: AGGGACCCAAATCCAGATCAAGGTGCAAGCCCAAGG...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS TCA 90 bp CCCGTAAGTCCTCCCAAGCTAGAGAAGCATAAGGAGAGCCATATCTaGAATGTCTCAGGTAGAGTGCTGACCACTCCAGCAAGAGCCAGT +
Preference number: 5 (lower is better)
Translates to: PVSPPKLEKHKESHI*NVSGRVLTTPARAS
Trigger: ACTGGCTCTTGCTGGAGTGGTCAGCACTCTACCTGAGACATTTCAGATATGGCTCTCCTTATGCTTCTCTAGCTTGGGAGGACTTACGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527245.5
CDS-3UTR CAA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGTTGTACCACTCAATGTaGGGTCGGGGTCGGCCTTCA +
Preference number: 5 (lower is better)
Translates to: KKEREELALCLLSQLKSWLYHSM*GRGRPS
Trigger: TGAAGGCCGACCCCGACCCAACATTGAGTGGTACAA...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGACACGCGCCCCGTTCTaGTACCACTCAATGTTGGGT +
Preference number: 5 (lower is better)
Translates to: KKEREELALCLLSQLKSWTRAPF*YHSMLG
Trigger: ACCCAACATTGAGTGGTACAAGAACGGGGCGCGTGT...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTATCCATCTCCTGCACATaGGCGATGTACAGGGTACCG +
Preference number: 5 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLSISCT*AMYRVP
Trigger: CGGTACCCTGTACATCGCCAATGTGCAGGAGATGGA...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGCCTTGGGCTTGCACCTaGATCTGGATTTGGGTCCCT +
Preference number: 5 (lower is better)
Translates to: KKEREELALCLLSQLKSWPWACT*IWIWVP
Trigger: AGGGACCCAAATCCAGATCAAGGTGCAAGCCCAAGG...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCCCAACAAGGGTCATCTaGGTTCCTCTCGGCGTTTCT +
Preference number: 5 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSPTRVI*VPLGVS
Trigger: AGAAACGCCGAGAGGAACCAAGATGACCCTTGTTGG...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CAA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGCTTCCTTCCTCTTCCTaGAGTCTTGCACCGTCCTTC +
Preference number: 5 (lower is better)
Translates to: KKEREELALCLLSQLKSWLPSSS*SLAPSF
Trigger: GAAGGACGGTGCAAGACTCAAGGAAGAGGAAGGAAG...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTATGTACAGGGTACCGTaGGCCATTGTCTTGAACTGG +
Preference number: 5 (lower is better)
Translates to: QPIEIVETNGLQLAPLITMYRVP*AIVLNW
Trigger: CCAGTTCAAGACAATGGCCAACGGTACCCTGTACAT...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCATGTACAGGGTACCGTaGGCCATTGTCTTGAACTGG +
Preference number: 5 (lower is better)
Translates to: RKGGASSLPSQPIEIVETMYRVP*AIVLNW
Trigger: CCAGTTCAAGACAATGGCCAACGGTACCCTGTACAT...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGACTGTAGGTCCAACATaGTCCAGCTTCCTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: KKEREELALCLLSQLKSWTVGPT*SSFLPQ
Trigger: CTGAGGGAGGAAGCTGGACAATGTTGGACCTACAGT...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAACTGTAGGTCCAACATaGTCCAGCTTCCTCCCTCAG +
Preference number: 5 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLTVGPT*SSFLPQ
Trigger: CTGAGGGAGGAAGCTGGACAATGTTGGACCTACAGT...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTACAGTACTTTGCTGGCTaGGGGACTGTAGGTCCAACA +
Preference number: 5 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLQYFAG*GTVGPT
Trigger: TGTTGGACCTACAGTCCCCAAGCCAGCAAAGTACTG...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATCAGTACTTTGCTGGCTaGGGGACTGTAGGTCCAACA +
Preference number: 5 (lower is better)
Translates to: KGGASSLPSQPIEIVETNQYFAG*GTVGPT
Trigger: TGTTGGACCTACAGTCCCCAAGCCAGCAAAGTACTG...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp AGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTACCAACAAGGGTCATCTaGGTTCCTCTCGGCGTTTCT +
Preference number: 5 (lower is better)
Translates to: SSLPSQPIEIVETNGLQLPTRVI*VPLGVS
Trigger: AGAAACGCCGAGAGGAACCAAGATGACCCTTGTTGG...TAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CAA 90 bp CTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCATGCCTGCATCGCTCTaGAGTGTATGTGACATCATC +
Preference number: 5 (lower is better)
Translates to: LALCLLSQLKSWKPMGFSMPASL*SVCDII
Trigger: GATGATGTCACATACACTCAAGAGCGATGCAGGCAT...GCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp GAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGGGTAATGCTGTTCTaGGTGATCTCAGTGACCACT +
Preference number: 5 (lower is better)
Translates to: ELALCLLSQLKSWKPMGFRVMLF*VISVTT
Trigger: AGTGGTCACTGAGATCACCAAGAACAGCATTACCCT...GAAGCCCATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp AAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCAATTCCAATATGTCCTTATaGGCAGACGTTCCGCGTTCC +
Preference number: 5 (lower is better)
Translates to: KGGASSLPSQPIEIVETNSNMSL*ADVPRS
Trigger: GGAACGCGGAACGTCTGCCAATAAGGACATATTGGA...ATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538940.5
CDS-3UTR CAA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGGTTCAGACAGGGAAATaGTGGGGAGAGATTGAGGCT +
Preference number: 5 (lower is better)
Translates to: KKEREELALCLLSQLKSWVQTGK*WGEIEA
Trigger: AGCCTCAATCTCTCCCCACAATTTCCCTGTCTGAAC...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538940.5
CDS TCA 90 bp CAGATCCATCCACCCATCCATCCATCCACCCACCCAGTCATCTACTaGGTAGATACGTATAGAGGGCTTGCAATGAGTGAGGTACTATAT +
Preference number: 5 (lower is better)
Translates to: QIHPPIHPSTHPVIY*VDTYRGLAMSEVLY
Trigger: ATATAGTACCTCACTCATTGCAAGCCCTCTATACGTATCTACTCAGTAGATGACTGGGTGGGTGGATGGATGGATGGGTGGATGGATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527245.5
CDS-3UTR CAA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGATGCCTGCATCGCTCTaGAGTGTATGTGACATCATC +
Preference number: 5 (lower is better)
Translates to: KKEREELALCLLSQLKSWMPASL*SVCDII
Trigger: GATGATGTCACATACACTCAAGAGCGATGCAGGCAT...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp GAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAAGGGTAATGCTGTTCTaGGTGATCTCAGTGACCACT +
Preference number: 5 (lower is better)
Translates to: ERKGGASSLPSQPIEIVERVMLF*VISVTT
Trigger: AGTGGTCACTGAGATCACCAAGAACAGCATTACCCT...TTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS-3UTR CAA 90 bp AGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGAAACCTGCCTTCTCAGCCAATaGAAATCGTGGAAACCAATG +
Preference number: 5 (lower is better)
Translates to: RKGGASSLPSQPIEIVETCLLSQ*KSWKPM
Trigger: CATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCA...GGTTTCCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CAA 90 bp CAGCCAATTGAAATCGTGGAAACCAATGGGCTTCAGCTAGCCCCACTCATCACTTGCCTTCTCAGCCAATaGAAATCGTGGAAACCAATG +
Preference number: 5 (lower is better)
Translates to: QPIEIVETNGLQLAPLITCLLSQ*KSWKPM
Trigger: CATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCA...AGTGATGAGTGGGGCTAGCTGAAGCCCATTGGTTTCCACGATTTCAATTGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS-3UTR CAA 90 bp AAGAAAGAAAGGGAGGAGCTAGCTCTCTGCCTTCTCAGCCAATTGAAATCGTGGTGCCTTCTCAGCCAATaGAAATCGTGGAAACCAATG +
Preference number: 5 (lower is better)
Translates to: KKEREELALCLLSQLKSWCLLSQ*KSWKPM
Trigger: CATTGGTTTCCACGATTTCAATTGGCTGAGAAGGCA...CCACGATTTCAATTGGCTGAGAAGGCAGAGAGCTAGCTCCTCCCTTTCTTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397801.6
ENST00000538940.5
ENST00000543966.5
CDS GCA 72 bp CTGGGAGCCGTAAGCCCCTCCACAGCCTCTGCGCGCTaGGGCAGCCACGGTGCCGCTCTCCTGCCGGTGCGC +
Preference number: 6 (lower is better)
Translates to: LGAVSPSTASAR*GSHGAALLPVR
Trigger: GCGCACCGGCAGGAGAGCGGCACCGTGGCTGCCGCAGCGCGCAGAGGCTGTGGAGGGGCTTACGGCTCCCAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397801.6
CDS CCA 72 bp GCACTGGGGCACTGGGCACGCCCACGCCTGCGCTGGTaGCCGCCGCGACCAGGGTTCGATAGAGGAGACCGG +
Preference number: 6 (lower is better)
Translates to: ALGHWARPRLRW*PPRPGFDRGDR
Trigger: CCGGTCTCCTCTATCGAACCCTGGTCGCGGCGGCCACCAGCGCAGGCGTGGGCGTGCCCAGTGCCCCAGTGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 72 bp CTGCACCAGCACTGGGGCACTGGGCACGCCCACGCCTaGGCTGGTGGCCGCCGCGACCAGGGTTCGATAGAG +
Preference number: 6 (lower is better)
Translates to: LHQHWGTGHAHA*AGGRRDQGSIE
Trigger: CTCTATCGAACCCTGGTCGCGGCGGCCACCAGCGCAGGCGTGGGCGTGCCCAGTGCCCCAGTGCTGGTGCAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CCA 72 bp CCAGCACTGGGGCACTGGGCACGCCCACGCCTGCGCTaGTGGCCGCCGCGACCAGGGTTCGATAGAGGAGAC +
Preference number: 6 (lower is better)
Translates to: PALGHWARPRLR*WPPRPGFDRGD
Trigger: GTCTCCTCTATCGAACCCTGGTCGCGGCGGCCACCAGCGCAGGCGTGGGCGTGCCCAGTGCCCCAGTGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 72 bp GCGGGCTCGCCTCGGGAGACCAGCAGATCTGGCGGCTaGTCCACGATGCGGGGCATAGCGTCCTCCGGTCCT +
Preference number: 6 (lower is better)
Translates to: AGSPRETSRSGG*STMRGIASSGP
Trigger: AGGACCGGAGGACGCTATGCCCCGCATCGTGGAGCAGCCGCCAGATCTGCTGGTCTCCCGAGGCGAGCCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 72 bp ACCTGCAGGGTCCGGGGTCCCAGGACTATGGGCTCCTaGAGGCGCACAGCCACTTCCGCCAGTCCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: TCRVRGPRTMGS*RRTATSASPCW
Trigger: CCAGCAGGGACTGGCGGAAGTGGCTGTGCGCCTGCAGGAGCCCATAGTCCTGGGACCCCGGACCCTGCAGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CCA 72 bp CAACGTGGCGGGCTCGCCTCGGGAGACCAGCAGATCTaGCGGCTGCTCCACGATGCGGGGCATAGCGTCCTC +
Preference number: 6 (lower is better)
Translates to: QRGGLASGDQQI*RLLHDAGHSVL
Trigger: GAGGACGCTATGCCCCGCATCGTGGAGCAGCCGCCAGATCTGCTGGTCTCCCGAGGCGAGCCCGCCACGTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CAA 90 bp TCGCCGGGAGGCAGCAGGGTGTGGTTGAGCGCCGCCAGCGAGGAGTaGAAGCCCAAGAGCAGCTCGCTGGAGTTGGAGATGTCCCCGGCC +
Preference number: 6 (lower is better)
Translates to: SPGGSRVWLSAASEE*KPKSSSLELEMSPA
Trigger: GGCCGGGGACATCTCCAACTCCAGCGAGCTGCTCTTGGGCTTCAACTCCTCGCTGGCGGCGCTCAACCACACCCTGCTGCCTCCCGGCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397801.6
CDS TCA 72 bp GGACCCTCGCCAGGGGCGGCCGTGCCCCTGGCCGTCTaGGCTAGATACAGGGAGATTCCCGCTTCTGCAGAG +
Preference number: 6 (lower is better)
Translates to: GPSPGAAVPLAV*ARYREIPASAE
Trigger: CTCTGCAGAAGCGGGAATCTCCCTGTATCTAGCTCAGACGGCCAGGGGCACGGCCGCCCCTGGCGAGGGTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527245.5
ENST00000529658.5
ENST00000534598.5
CDS CCA 72 bp TCCAGGACACCTGCAGGGTCCGGGGTCCCAGGACTATaGGCTCCTGCAGGCGCACAGCCACTTCCGCCAGTC +
Preference number: 6 (lower is better)
Translates to: SRTPAGSGVPGL*APAGAQPLPPV
Trigger: GACTGGCGGAAGTGGCTGTGCGCCTGCAGGAGCCCATAGTCCTGGGACCCCGGACCCTGCAGGTGTCCTGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS TCA 72 bp GGACCCTCGCCAGGGGCGGCCGTGCCCCTGGCCGTCTaGGCTAGATACAGGGAGATTCCCGCTTCTCAGAGA +
Preference number: 6 (lower is better)
Translates to: GPSPGAAVPLAV*ARYREIPASQR
Trigger: TCTCTGAGAAGCGGGAATCTCCCTGTATCTAGCTCAGACGGCCAGGGGCACGGCCGCCCCTGGCGAGGGTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525448.5
CDS GCA 72 bp ACCAGCTGGACTGGGCCATCCACAGTCCAGGACACCTaGAGGGTCCGGGGTCCCAGGACTATGGGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: TSWTGPSTVQDT*RVRGPRTMGSC
Trigger: GCAGGAGCCCATAGTCCTGGGACCCCGGACCCTGCAGGTGTCCTGGACTGTGGATGGCCCAGTCCAGCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 72 bp CGTATCCCGCCCCTACCCAAGAGGCTGAACTCCAGGTaGGACCCCTTTCTCCCGACCCGGTCCTCACTCGCC +
Preference number: 6 (lower is better)
Translates to: RIPPLPKRLNSR*DPFLPTRSSLA
Trigger: GGCGAGTGAGGACCGGGTCGGGAGAAAGGGGTCGCACCTGGAGTTCAGCCTCTTGGGTAGGGGCGGGATACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000525448.5
ENST00000527245.5
ENST00000529658.5
ENST00000531545.5
CDS CCA 72 bp CCAGCAGGCCTCGCTTCACGGATGCCCAGCATGGGCTaGGATACACTGAGAGGGGAACTCGGCCCAAGGGGC +
Preference number: 6 (lower is better)
Translates to: PAGLASRMPSMG*DTLRGELGPRG
Trigger: GCCCCTTGGGCCGAGTTCCCCTCTCAGTGTATCCCAGCCCATGCTGGGCATCCGTGAAGCGAGGCCTGCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000397801.6
ENST00000524971.1
ENST00000525304.5
ENST00000525448.5
ENST00000525482.5
ENST00000527196.5
ENST00000527245.5
ENST00000528144.5
ENST00000528820.5
ENST00000529658.5
ENST00000531075.5
ENST00000538940.5
ENST00000543966.5
CDS CCA 72 bp GCCCTGGCCCCGGGACAGGAAGCTTGGTCTGCTGTATaGGAGCCAGGCCTCTTCATCTGGGTGGAGCACCCG +
Preference number: 6 (lower is better)
Translates to: ALAPGQEAWSAV*EPGLFIWVEHP
Trigger: CGGGTGCTCCACCCAGATGAAGAGGCCTGGCTCCCATACAGCAGACCAAGCTTCCTGTCCCGGGGCCAGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000397801.6
ENST00000524971.1
ENST00000525304.5
ENST00000525448.5
ENST00000525482.5
ENST00000527196.5
ENST00000527245.5
ENST00000529658.5
ENST00000538940.5
ENST00000543966.5
CDS CCA 72 bp CCCTGGAAGAGTTGCTGCCGGCCGTGGAACATGTGCTaGTGCCCTGGCCCCGGGACAGGAAGCTTGGTCTGC +
Preference number: 6 (lower is better)
Translates to: PWKSCCRPWNMC*CPGPGTGSLVC
Trigger: GCAGACCAAGCTTCCTGTCCCGGGGCCAGGGCACCAGCACATGTTCCACGGCCGGCAGCAACTCTTCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000397801.6
ENST00000524971.1
ENST00000525304.5
ENST00000525448.5
ENST00000525482.5
ENST00000527196.5
ENST00000527245.5
ENST00000529658.5
ENST00000538940.5
ENST00000543966.5
CDS CCA 72 bp CCCTCCACCTGGGGCGTCAGCGGGGCGGAAGAAGAGTaGCCTGTCGGTGGAGGTCATCCTGAGGAAATGGGC +
Preference number: 6 (lower is better)
Translates to: PSTWGVSGAEEE*PVGGGHPEEMG
Trigger: GCCCATTTCCTCAGGATGACCTCCACCGACAGGCCACTCTTCTTCCGCCCCGCTGACGCCCCAGGTGGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000527245.5
ENST00000531888.1
CDS CAA 90 bp CTTGACCCGTTGAGAGAGGGATCGCCGGGAGGCAGCAGGGTGTGGTaGAGCGCCGCCAGCGAGGAGTTGAAGCCCAAGAGCAGCTCGCTG +
Preference number: 6 (lower is better)
Translates to: LDPLREGSPGGSRVW*SAASEELKPKSSSL
Trigger: CAGCGAGCTGCTCTTGGGCTTCAACTCCTCGCTGGCGGCGCTCAACCACACCCTGCTGCCTCCCGGCGATCCCTCTCTCAACGGGTCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397801.6
CDS TCA 72 bp CCAGCAGGGCCTTGGCCAGGATGCTGCCAGCCACACTaGCAGCCTGGCACACGTAGTACCCAGCATCCCCAC +
Preference number: 6 (lower is better)
Translates to: PAGPWPGCCQPH*QPGTRSTQHPH
Trigger: GTGGGGATGCTGGGTACTACGTGTGCCAGGCTGTCAGTGTGGCTGGCAGCATCCTGGCCAAGGCCCTGCTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS TCA 72 bp AAGGTGTGGGAGAGGGGGTTTCCCTTCGGGATGGGGTaGCCAGGCACCCTCCACTGGAGCTGGGCTCCGTCA +
Preference number: 6 (lower is better)
Translates to: KVWERGFPFGMG*PGTLHWSWAPS
Trigger: TGACGGAGCCCAGCTCCAGTGGAGGGTGCCTGGTCACCCCATCCCGAAGGGAAACCCCCTCTCCCACACCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000397801.6
ENST00000524971.1
ENST00000525304.5
ENST00000525448.5
ENST00000525482.5
ENST00000526551.5
ENST00000527196.5
ENST00000527245.5
ENST00000528144.5
ENST00000528820.5
ENST00000529658.5
ENST00000538940.5
ENST00000543966.5
CDS GCA 72 bp GCGAGGCGTTTCTGCTCGCTGCTGCCCCCAGGTAGTTaGGAGCCACGCAAGTGTAGACACCTTCGTCCGGCC +
Preference number: 6 (lower is better)
Translates to: ARRFCSLLPPGS*EPRKCRHLRPA
Trigger: GGCCGGACGAAGGTGTCTACACTTGCGTGGCTCGCAACTACCTGGGGGCAGCAGCGAGCAGAAACGCCTCGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 72 bp CCCGCCTTTCCATCCAGACCCCGCCGCACAATTTACTaGCTGGGATCCTGGCCACACCCCCTCTTGCCAGGC +
Preference number: 6 (lower is better)
Translates to: PAFPSRPRRTIY*LGSWPHPLLPG
Trigger: GCCTGGCAAGAGGGGGTGTGGCCAGGATCCCAGGCAGTAAATTGTGCGGCGGGGTCTGGATGGAAAGGCGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000525448.5
ENST00000527245.5
ENST00000528144.5
ENST00000529658.5
ENST00000531888.1
CDS CCA 72 bp CACTGGAAAGCCACGCTCTCTCCAGGAGCTGCCATCTaGTCCTGGGGCTGGGTCACCAACTGGGGTGGGACG +
Preference number: 6 (lower is better)
Translates to: HWKATLSPGAAI*SWGWVTNWGGT
Trigger: CGTCCCACCCCAGTTGGTGACCCAGCCCCAGGACCAGATGGCAGCTCCTGGAGAGAGCGTGGCTTTCCAGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CCA 72 bp CACAGCCACTTCCGCCAGTCCCTGCTGGCCTCTCCATaGGTCCTCCACTGGCCTAGAGGGGCTGCTATCCTG +
Preference number: 6 (lower is better)
Translates to: HSHFRQSLLASP*VLHWPRGAAIL
Trigger: CAGGATAGCAGCCCCTCTAGGCCAGTGGAGGACCCATGGAGAGGCCAGCAGGGACTGGCGGAAGTGGCTGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CCA 72 bp GAGTTGCTGCCGGCCGTGGAACATGTGCTGGTGCCCTaGCCCCGGGACAGGAAGCTTGGTCTGCTGTATGGG +
Preference number: 6 (lower is better)
Translates to: ELLPAVEHVLVP*PRDRKLGLLYG
Trigger: CCCATACAGCAGACCAAGCTTCCTGTCCCGGGGCCAGGGCACCAGCACATGTTCCACGGCCGGCAGCAACTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000397801.6
ENST00000524971.1
ENST00000525304.5
ENST00000525448.5
ENST00000525482.5
ENST00000527196.5
ENST00000527245.5
ENST00000529658.5
ENST00000538940.5
ENST00000543966.5
CDS CAA 72 bp TTGAGAGAGGGATCGCCGGGAGGCAGCAGGGTGTGGTaGAGCGCCGCCAGCGAGGAGTTGAAGCCCAAGAGC +
Preference number: 6 (lower is better)
Translates to: LREGSPGGSRVW*SAASEELKPKS
Trigger: GCTCTTGGGCTTCAACTCCTCGCTGGCGGCGCTCAACCACACCCTGCTGCCTCCCGGCGATCCCTCTCTCAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397801.6
CDS GCA 72 bp GAGACCGGGCACCAGTCCTCGGAGCATTGCGGAGCGTaGCCAGCCTGCTGCAGATCGATTGAGGTGAAAGCG +
Preference number: 6 (lower is better)
Translates to: ETGHQSSEHCGA*PACCRSIEVKA
Trigger: CGCTTTCACCTCAATCGATCTGCAGCAGGCTGGGCACGCTCCGCAATGCTCCGAGGACTGGTGCCCGGTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 72 bp TGCTGGTGCCCTGGCCCCGGGACAGGAAGCTTGGTCTaGTGTATGGGAGCCAGGCCTCTTCATCTGGGTGGA +
Preference number: 6 (lower is better)
Translates to: CWCPGPGTGSLV*CMGARPLHLGG
Trigger: TCCACCCAGATGAAGAGGCCTGGCTCCCATACAGCAGACCAAGCTTCCTGTCCCGGGGCCAGGGCACCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000397801.6
ENST00000524971.1
ENST00000525304.5
ENST00000525448.5
ENST00000525482.5
ENST00000527196.5
ENST00000527245.5
ENST00000529658.5
ENST00000538940.5
ENST00000543966.5
CDS CCA 72 bp TCATCTGCAGCAGCGTTTTCAGCAGGTAGCGCAGCATaGCTCGACCCAGCTGGGATCGGGACTGGGGGCTGG +
Preference number: 6 (lower is better)
Translates to: SSAAAFSAGSAA*LDPAGIGTGGW
Trigger: CCAGCCCCCAGTCCCGATCCCAGCTGGGTCGAGCCATGCTGCGCTACCTGCTGAAAACGCTGCTGCAGATGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397801.6
CDS CCA 72 bp CCAGCATCCCCACGCTGCACCGCGGTGATGTTAAGTTaGCCTCTTGGAGACACTGAGAAGCGCCCCGTCGGC +
Preference number: 6 (lower is better)
Translates to: PASPRCTAVMLS*PLGDTEKRPVG
Trigger: GCCGACGGGGCGCTTCTCAGTGTCTCCAAGAGGCCAACTTAACATCACCGCGGTGCAGCGTGGGGATGCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CCA 72 bp TATAGACAGGACCCTCGCCAGGGGCGGCCGTGCCCCTaGCCGTCTGAGCTAGATACAGGGAGATTCCCGCTT +
Preference number: 6 (lower is better)
Translates to: YRQDPRQGRPCP*PSELDTGRFPL
Trigger: AAGCGGGAATCTCCCTGTATCTAGCTCAGACGGCCAGGGGCACGGCCGCCCCTGGCGAGGGTCCTGTCTATA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000397801.6
ENST00000525448.5
ENST00000525482.5
ENST00000527196.5
ENST00000527245.5
ENST00000529658.5
ENST00000534598.5
ENST00000538940.5
ENST00000543966.5
CDS CCA 72 bp GAAGCCCCCATGGAAGGTCTGCAGCTCCTCCCCCGCTaGGTCAATGGTGCTATAGACAGGACCCTCGCCAGG +
Preference number: 6 (lower is better)
Translates to: EAPMEGLQLLPR*VNGAIDRTLAR
Trigger: CCTGGCGAGGGTCCTGTCTATAGCACCATTGACCCAGCGGGGGAGGAGCTGCAGACCTTCCATGGGGGCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000397801.6
ENST00000525448.5
ENST00000525482.5
ENST00000527196.5
ENST00000527245.5
ENST00000529658.5
ENST00000534598.5
ENST00000538940.5
ENST00000543966.5
CDS CCA 72 bp AGAAGTGAGGGGAGGAGGGGCCCGAAACCCTGGAACTaGGAAAGGGTCATTCCCGACCCGGCAGGCACAGCT +
Preference number: 6 (lower is better)
Translates to: RSEGRRGPKPWN*ERVIPDPAGTA
Trigger: AGCTGTGCCTGCCGGGTCGGGAATGACCCTTTCCCAGTTCCAGGGTTTCGGGCCCCTCCTCCCCTCACTTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527196.5
CDS CAA 90 bp GCTTCCTCCCTCAGGGCCTGCTACCCTCCAAGACACCCGGAAACCTaGCACCAGCTGGACTGGGCCATCCACAGTCCAGGACACCTGCAG +
Preference number: 6 (lower is better)
Translates to: ASSLRACYPPRHPET*HQLDWAIHSPGHLQ
Trigger: CTGCAGGTGTCCTGGACTGTGGATGGCCCAGTCCAGCTGGTGCAAGGTTTCCGGGTGTCTTGGAGGGTAGCAGGCCCTGAGGGAGGAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CAA 90 bp GCTCCTGGTCACAGAGAGGCTTTCAGCCCCCAGCCCCTCCTGGCCTaGGGCTTGCACCTTGATCTGGATTTGGGTCCCTGGAGGGAGTCC +
Preference number: 6 (lower is better)
Translates to: APGHREAFSPQPLLA*GLHLDLDLGPWRES
Trigger: GGACTCCCTCCAGGGACCCAAATCCAGATCAAGGTGCAAGCCCAAGGCCAGGAGGGGCTGGGGGCTGAAAGCCTCTCTGTGACCAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CAA 90 bp CAACAAGGGTCATCTTGGTTCCTCTCGGCGTTTCTGTCCTGGCCTTaGGCTCTGGCTCCGGCTCTGACTCCGACTCCGGCTCCGGCCAGG +
Preference number: 6 (lower is better)
Translates to: QQGSSWFLSAFLSWP*ALAPALTPTPAPAR
Trigger: CCTGGCCGGAGCCGGAGTCGGAGTCAGAGCCGGAGCCAGAGCCAAAGGCCAGGACAGAAACGCCGAGAGGAACCAAGATGACCCTTGTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397801.6
ENST00000525448.5
ENST00000525482.5
ENST00000527196.5
ENST00000527245.5
ENST00000529658.5
ENST00000538940.5
ENST00000543966.5
CDS CAA 90 bp AGCGCCGCCAGCGAGGAGTTGAAGCCCAAGAGCAGCTCGCTGGAGTaGGAGATGTCCCCGGCCAGAGAGTCCGCGAACAAGTTCATCTGC +
Preference number: 6 (lower is better)
Translates to: SAASEELKPKSSSLE*EMSPARESANKFIC
Trigger: GCAGATGAACTTGTTCGCGGACTCTCTGGCCGGGGACATCTCCAACTCCAGCGAGCTGCTCTTGGGCTTCAACTCCTCGCTGGCGGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397801.6
CDS TCA 72 bp GCGGAGCGTGCCCAGCCTGCTGCAGATCGATTGAGGTaGAAGCGGCTCTCATTGCCCAGGCACCAGATCTGG +
Preference number: 6 (lower is better)
Translates to: AERAQPAADRLR*KRLSLPRHQIW
Trigger: CCAGATCTGGTGCCTGGGCAATGAGAGCCGCTTTCACCTCAATCGATCTGCAGCAGGCTGGGCACGCTCCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS TCA 72 bp AGAGGGGAACTCGGCCCAAGGGGCACCCTCCTGCAATaGCAGGAGGCCGCAGCCTCTGTTCCCTCCACAAAA +
Preference number: 6 (lower is better)
Translates to: RGELGPRGTLLQ*QEAAASVPSTK
Trigger: TTTTGTGGAGGGAACAGAGGCTGCGGCCTCCTGTCATTGCAGGAGGGTGCCCCTTGGGCCGAGTTCCCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527245.5
CDS GCA 72 bp GAGGACTGCCACTTCCAGCGAGGCGTTTCTGCTCGCTaGTGCCCCCAGGTAGTTGCGAGCCACGCAAGTGTA +
Preference number: 6 (lower is better)
Translates to: EDCHFQRGVSAR*CPQVVASHASV
Trigger: TACACTTGCGTGGCTCGCAACTACCTGGGGGCAGCAGCGAGCAGAAACGCCTCGCTGGAAGTGGCAGTCCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 72 bp TCAGGGCCTGCTACCCTCCAAGACACCCGGAAACCTTaGACCAGCTGGACTGGGCCATCCACAGTCCAGGAC +
Preference number: 6 (lower is better)
Translates to: SGPATLQDTRKP*TSWTGPSTVQD
Trigger: GTCCTGGACTGTGGATGGCCCAGTCCAGCTGGTGCAAGGTTTCCGGGTGTCTTGGAGGGTAGCAGGCCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 72 bp TCGATAGAGGAGACCGGGCACCAGTCCTCGGAGCATTaGGGAGCGTGCCCAGCCTGCTGCAGATCGATTGAG +
Preference number: 6 (lower is better)
Translates to: SIEETGHQSSEH*GACPACCRSIE
Trigger: CTCAATCGATCTGCAGCAGGCTGGGCACGCTCCGCAATGCTCCGAGGACTGGTGCCCGGTCTCCTCTATCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CCA 72 bp CCACACGGAGGAGCCAAGCACCAGCGTCTGATTGGCTaGTCCCTGGAGGATGACAGGAGGCAGCCCATCCAA +
Preference number: 6 (lower is better)
Translates to: PHGGAKHQRLIG*SLEDDRRQPIQ
Trigger: TTGGATGGGCTGCCTCCTGTCATCCTCCAGGGACCAGCCAATCAGACGCTGGTGCTTGGCTCCTCCGTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CCA 72 bp CCTGCAGCCACTGCCCATCCTTCTTCCATCGGACACTaGGTTGAGGGTTCCCAGTCACTCTGCAGGGCAGCC +
Preference number: 6 (lower is better)
Translates to: PAATAHPSSIGH*VEGSQSLCRAA
Trigger: GGCTGCCCTGCAGAGTGACTGGGAACCCTCAACCCAGTGTCCGATGGAAGAAGGATGGGCAGTGGCTGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS TCA 72 bp AGCCACTGCCCATCCTTCTTCCATCGGACACTGGGTTaGGGGTTCCCAGTCACTCTGCAGGGCAGCCACACG +
Preference number: 6 (lower is better)
Translates to: SHCPSFFHRTLG*GFPVTLQGSHT
Trigger: CGTGTGGCTGCCCTGCAGAGTGACTGGGAACCCTCAACCCAGTGTCCGATGGAAGAAGGATGGGCAGTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS TCA 72 bp GCATTGCGGAGCGTGCCCAGCCTGCTGCAGATCGATTaGGGTGAAAGCGGCTCTCATTGCCCAGGCACCAGA +
Preference number: 6 (lower is better)
Translates to: ALRSVPSLLQID*GESGSHCPGTR
Trigger: TCTGGTGCCTGGGCAATGAGAGCCGCTTTCACCTCAATCGATCTGCAGCAGGCTGGGCACGCTCCGCAATGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 72 bp ACCGCTGACTGTGTGTGTCTCCAGCTGCACGCCATCTaGCACAGTACGCCATGTGTTGCCAGCTGCTGGGCT +
Preference number: 6 (lower is better)
Translates to: TADCVCLQLHAI*HSTPCVASCWA
Trigger: AGCCCAGCAGCTGGCAACACATGGCGTACTGTGGCAGATGGCGTGCAGCTGGAGACACACACAGTCAGCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 72 bp CAGTCCTCGGAGCATTGCGGAGCGTGCCCAGCCTGCTaGAGATCGATTGAGGTGAAAGCGGCTCTCATTGCC +
Preference number: 6 (lower is better)
Translates to: QSSEHCGACPAC*RSIEVKAALIA
Trigger: GGCAATGAGAGCCGCTTTCACCTCAATCGATCTGCAGCAGGCTGGGCACGCTCCGCAATGCTCCGAGGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CCA 72 bp AGTTGGAGTCATACCACTGTCCCCCTGGCTCCACTCTaGAGGAGCGTACTGGCTCCAGGGACCCAGATCTCC +
Preference number: 6 (lower is better)
Translates to: SWSHTTVPLAPL*RSVLAPGTQIS
Trigger: GGAGATCTGGGTCCCTGGAGCCAGTACGCTCCTCCAGAGTGGAGCCAGGGGGACAGTGGTATGACTCCAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534598.5
CDS CCA 72 bp GGGGTTTCAGGAGTTGGAGTCATACCACTGTCCCCCTaGCTCCACTCTGGAGGAGCGTACTGGCTCCAGGGA +
Preference number: 6 (lower is better)
Translates to: GVSGVGVIPLSP*LHSGGAYWLQG
Trigger: TCCCTGGAGCCAGTACGCTCCTCCAGAGTGGAGCCAGGGGGACAGTGGTATGACTCCAACTCCTGAAACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534598.5
CDS CAA 72 bp AGCGAGGAGTTGAAGCCCAAGAGCAGCTCGCTGGAGTaGGAGATGTCCCCGGCCAGAGAGTCCGCGAACAAG +
Preference number: 6 (lower is better)
Translates to: SEELKPKSSSLE*EMSPARESANK
Trigger: CTTGTTCGCGGACTCTCTGGCCGGGGACATCTCCAACTCCAGCGAGCTGCTCTTGGGCTTCAACTCCTCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397801.6
CDS CAA 72 bp GAGGGCATCTGCACAGGTTTCCCCAGAAGCTTCACTTaGCCTCCCTTGGCTCCACTGTCCCCCTGGCTCCAC +
Preference number: 6 (lower is better)
Translates to: EGICTGFPRSFT*PPLAPLSPWLH
Trigger: GTGGAGCCAGGGGGACAGTGGAGCCAAGGGAGGCAAAGTGAAGCTTCTGGGGAAACCTGTGCAGATGCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000397801.6
ENST00000525448.5
ENST00000525482.5
ENST00000527196.5
ENST00000527245.5
ENST00000529658.5
ENST00000538940.5
CDS CAA 72 bp TCATCTTGGTTCCTCTCGGCGTTTCTGTCCTGGCCTTaGGCTCTGGCTCCGGCTCTGACTCCGACTCCGGCT +
Preference number: 6 (lower is better)
Translates to: SSWFLSAFLSWP*ALAPALTPTPA
Trigger: AGCCGGAGTCGGAGTCAGAGCCGGAGCCAGAGCCAAAGGCCAGGACAGAAACGCCGAGAGGAACCAAGATGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397801.6
ENST00000525448.5
ENST00000525482.5
ENST00000527196.5
ENST00000527245.5
ENST00000529658.5
ENST00000538940.5
ENST00000543966.5
CDS GCA 72 bp CACCAGTCCTCGGAGCATTGCGGAGCGTGCCCAGCCTaGTGCAGATCGATTGAGGTGAAAGCGGCTCTCATT +
Preference number: 6 (lower is better)
Translates to: HQSSEHCGACPA*CRSIEVKAALI
Trigger: AATGAGAGCCGCTTTCACCTCAATCGATCTGCAGCAGGCTGGGCACGCTCCGCAATGCTCCGAGGACTGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 72 bp AGGGCATCTGCACAGGTTTCCCCAGAAGCTTCACTTTaGCTCCCTTGGCTCCACTGTCCCCCTGGCTCCACT +
Preference number: 6 (lower is better)
Translates to: RASAQVSPEASL*LPWLHCPPGST
Trigger: AGTGGAGCCAGGGGGACAGTGGAGCCAAGGGAGGCAAAGTGAAGCTTCTGGGGAAACCTGTGCAGATGCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000397801.6
ENST00000525448.5
ENST00000525482.5
ENST00000527196.5
ENST00000527245.5
ENST00000529658.5
ENST00000538940.5
CDS CCA 72 bp CTTCAGCTGCCGCACTCTCCCGTTCTCCCGCCATGTTaGAGGCTACGCACACATACATGCCTGCATCGCTCT +
Preference number: 6 (lower is better)
Translates to: LQLPHSPVLPPC*RLRTHTCLHRS
Trigger: AGAGCGATGCAGGCATGTATGTGTGCGTAGCCTCCAACATGGCGGGAGAACGGGAGAGTGCGGCAGCTGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CCA 72 bp CAAGGGTCATCTTGGTTCCTCTCGGCGTTTCTGTCCTaGCCTTTGGCTCTGGCTCCGGCTCTGACTCCGACT +
Preference number: 6 (lower is better)
Translates to: QGSSWFLSAFLS*PLALAPALTPT
Trigger: AGTCGGAGTCAGAGCCGGAGCCAGAGCCAAAGGCCAGGACAGAAACGCCGAGAGGAACCAAGATGACCCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000397801.6
ENST00000525448.5
ENST00000525482.5
ENST00000527196.5
ENST00000527245.5
ENST00000529658.5
ENST00000538940.5
ENST00000543966.5
CDS CAA 72 bp ACTTCAGCTGCCGCACTCTCCCGTTCTCCCGCCATGTaGGAGGCTACGCACACATACATGCCTGCATCGCTC +
Preference number: 6 (lower is better)
Translates to: TSAAALSRSPAM*EATHTYMPASL
Trigger: GAGCGATGCAGGCATGTATGTGTGCGTAGCCTCCAACATGGCGGGAGAACGGGAGAGTGCGGCAGCTGAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CAA 90 bp ATCATCAGCTTCCCTCCACGGATCGTGATCCTTCCTTCCTCTTCCTaGAGTCTTGCACCGTCCTTCCTCCAGGACACGGAAGGCTCCGGG +
Preference number: 6 (lower is better)
Translates to: IISFPPRIVILPSSS*SLAPSFLQDTEGSG
Trigger: CCCGGAGCCTTCCGTGTCCTGGAGGAAGGACGGTGCAAGACTCAAGGAAGAGGAAGGAAGGATCACGATCCGTGGAGGGAAGCTGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CAA 90 bp GAGGGCATCTGCACAGGTTTCCCCAGAAGCTTCACTTTGCCTCCCTaGGCTCCTGAGGAGAATAGGATGGGGACACCCGGAGAACAGGCA +
Preference number: 6 (lower is better)
Translates to: EGICTGFPRSFTLPP*APEENRMGTPGEQA
Trigger: TGCCTGTTCTCCGGGTGTCCCCATCCTATTCTCCTCAGGAGCCAAGGGAGGCAAAGTGAAGCTTCTGGGGAAACCTGTGCAGATGCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534598.5
CDS TCA 72 bp CATAGGAAAGTCACAGGGGCATCAGCCAGGACCACCTaGTTCACTGGTCTGCGCAGGAATGAGGGACGCTCC +
Preference number: 6 (lower is better)
Translates to: HRKVTGASARTT*FTGLRRNEGRS
Trigger: GGAGCGTCCCTCATTCCTGCGCAGACCAGTGAATCAGGTGGTCCTGGCTGATGCCCCTGTGACTTTCCTATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 72 bp CCGTTGGCCATTGTCTTGAACTGGAGGTCATCCCCCTaGAGCCACTGCCCATCCTTCTTCCATCGGACACTG +
Preference number: 6 (lower is better)
Translates to: PLAIVLNWRSSP*SHCPSFFHRTL
Trigger: CAGTGTCCGATGGAAGAAGGATGGGCAGTGGCTGCAGGGGGATGACCTCCAGTTCAAGACAATGGCCAACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CCA 72 bp GATACCCTGGTCAGGGCTAAACGGGGTTTCAGGAGTTaGAGTCATACCACTGTCCCCCTGGCTCCACTCTGG +
Preference number: 6 (lower is better)
Translates to: DTLVRAKRGFRS*SHTTVPLAPLW
Trigger: CCAGAGTGGAGCCAGGGGGACAGTGGTATGACTCCAACTCCTGAAACCCCGTTTAGCCCTGACCAGGGTATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534598.5
CDS CAA 72 bp CAGTACTTTGCTGGCTTGGGGACTGTAGGTCCAACATaGTCCAGCTTCCTCCCTCAGGGCCTGCTACCCTCC +
Preference number: 6 (lower is better)
Translates to: QYFAGLGTVGPT*SSFLPQGLLPS
Trigger: GGAGGGTAGCAGGCCCTGAGGGAGGAAGCTGGACAATGTTGGACCTACAGTCCCCAAGCCAGCAAAGTACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CAA 90 bp AAGCCCATGTCCATCTCCTGCACATTGGCGATGTACAGGGTACCGTaGGCCATTGTCTTGAACTGGAGGTCATCCCCCTGCAGCCACTGC +
Preference number: 6 (lower is better)
Translates to: KPMSISCTLAMYRVP*AIVLNWRSSPCSHC
Trigger: GCAGTGGCTGCAGGGGGATGACCTCCAGTTCAAGACAATGGCCAACGGTACCCTGTACATCGCCAATGTGCAGGAGATGGACATGGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CAA 90 bp CTCTTAGCACAGTACTTTGCTGGCTTGGGGACTGTAGGTCCAACATaGTCCAGCTTCCTCCCTCAGGGCCTGCTACCCTCCAAGACACCC +
Preference number: 6 (lower is better)
Translates to: LLAQYFAGLGTVGPT*SSFLPQGLLPSKTP
Trigger: GGGTGTCTTGGAGGGTAGCAGGCCCTGAGGGAGGAAGCTGGACAATGTTGGACCTACAGTCCCCAAGCCAGCAAAGTACTGTGCTAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CAA 90 bp AGGGGGTGGCGCAGAGCGTTCAGACAGGGAAATTGTGGGGAGAGATaGAGGCTCCAGAGGGAAAGAGAATCCTCTGGTCGTTCCATCTCC +
Preference number: 6 (lower is better)
Translates to: RGWRRAFRQGNCGER*RLQRERESSGRSIS
Trigger: GGAGATGGAACGACCAGAGGATTCTCTTTCCCTCTGGAGCCTCAATCTCTCCCCACAATTTCCCTGTCTGAACGCTCTGCGCCACCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538940.5
CDS CAA 90 bp CAGTTCAGAGAGGGCATCTGCACAGGTTTCCCCAGAAGCTTCACTTaGCCTCCCTTGGCTCCTGAGGAGAATAGGATGGGGACACCCGGA +
Preference number: 6 (lower is better)
Translates to: QFREGICTGFPRSFT*PPLAPEENRMGTPG
Trigger: TCCGGGTGTCCCCATCCTATTCTCCTCAGGAGCCAAGGGAGGCAAAGTGAAGCTTCTGGGGAAACCTGTGCAGATGCCCTCTCTGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534598.5
CDS GCA 72 bp TGCTGGGCTGAAGGCCTCTATCACATAAGACGTGACTaGAGCCCCAGTTTGTGGGTTGGGCTTCCAGGTCAG +
Preference number: 6 (lower is better)
Translates to: CWAEGLYHIRRD*SPSLWVGLPGQ
Trigger: CTGACCTGGAAGCCCAACCCACAAACTGGGGCTGCAGTCACGTCTTATGTGATAGAGGCCTTCAGCCCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 72 bp CCGTCCTCGAACTTGCCCCTTCTTTATGGAGATGGTTaGAAAGCCTGGCCTCCTCGTGGCGTCTTAGAGGCA +
Preference number: 6 (lower is better)
Translates to: PSSNLPLLYGDG*KAWPPRGVLEA
Trigger: TGCCTCTAAGACGCCACGAGGAGGCCAGGCTTTGCAACCATCTCCATAAAGAAGGGGCAAGTTCGAGGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525448.5
ENST00000527245.5
ENST00000529658.5
CDS GCA 72 bp TGGCAGACGTTCCGCGTTCCTCGTCTCAAAGGAAGATaGCTACAGACAGGCCGGTTAGTAGAGGGATCGGGA +
Preference number: 6 (lower is better)
Translates to: WQTFRVPRLKGR*LQTGRLVEGSG
Trigger: TCCCGATCCCTCTACTAACCGGCCTGTCTGTAGGCATCTTCCTTTGAGACGAGGAACGCGGAACGTCTGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538940.5
CDS CAA 72 bp ACATTGGCGATGTACAGGGTACCGTTGGCCATTGTCTaGAACTGGAGGTCATCCCCCTGCAGCCACTGCCCA +
Preference number: 6 (lower is better)
Translates to: TLAMYRVPLAIV*NWRSSPCSHCP
Trigger: TGGGCAGTGGCTGCAGGGGGATGACCTCCAGTTCAAGACAATGGCCAACGGTACCCTGTACATCGCCAATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CAA 72 bp TCCGTCCTCGAACTTGCCCCTTCTTTATGGAGATGGTaGCAAAGCCTGGCCTCCTCGTGGCGTCTTAGAGGC +
Preference number: 6 (lower is better)
Translates to: SVLELAPSLWRW*QSLASSWRLRG
Trigger: GCCTCTAAGACGCCACGAGGAGGCCAGGCTTTGCAACCATCTCCATAAAGAAGGGGCAAGTTCGAGGACGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525448.5
ENST00000527245.5
ENST00000529658.5
CDS CAA 72 bp GAGGGCATCTGCACAGGTTTCCCCAGAAGCTTCACTTaGCCTCCCTTGGCTCCTGAGGAGAATAGGATGGGG +
Preference number: 6 (lower is better)
Translates to: EGICTGFPRSFT*PPLAPEENRMG
Trigger: CCCCATCCTATTCTCCTCAGGAGCCAAGGGAGGCAAAGTGAAGCTTCTGGGGAAACCTGTGCAGATGCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534598.5
CDS CAA 90 bp AGTACCATGACTTCAGCTGCCGCACTCTCCCGTTCTCCCGCCATGTaGGAGGCTACGCACACATACATGCCTGCATCGCTCTTGAGTGTA +
Preference number: 6 (lower is better)
Translates to: STMTSAAALSRSPAM*EATHTYMPASLLSV
Trigger: TACACTCAAGAGCGATGCAGGCATGTATGTGTGCGTAGCCTCCAACATGGCGGGAGAACGGGAGAGTGCGGCAGCTGAAGTCATGGTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CAA 90 bp ATCTCCTGCACATTGGCGATGTACAGGGTACCGTTGGCCATTGTCTaGAACTGGAGGTCATCCCCCTGCAGCCACTGCCCATCCTTCTTC +
Preference number: 6 (lower is better)
Translates to: ISCTLAMYRVPLAIV*NWRSSPCSHCPSFF
Trigger: GAAGAAGGATGGGCAGTGGCTGCAGGGGGATGACCTCCAGTTCAAGACAATGGCCAACGGTACCCTGTACATCGCCAATGTGCAGGAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS TCA 72 bp GGCGGAAGAAGAGTGGCCTGTCGGTGGAGGTCATCCTaGGGAAATGGGCTAAGAGAATTACCTGGAACTGGC +
Preference number: 6 (lower is better)
Translates to: GGRRVACRWRSS*GNGLRELPGTG
Trigger: GCCAGTTCCAGGTAATTCTCTTAGCCCATTTCCTCAGGATGACCTCCACCGACAGGCCACTCTTCTTCCGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527245.5
ENST00000531888.1
CDS TCA 72 bp TCCTGCCCAAATTACACTTCCACCCTGACACAGCCCTaGGACCTCTGTACCCCAGATCCATCCACCCATCCA +
Preference number: 6 (lower is better)
Translates to: SCPNYTSTLTQP*DLCTPDPSTHP
Trigger: TGGATGGGTGGATGGATCTGGGGTACAGAGGTCTCAGGGCTGTGTCAGGGTGGAAGTGTAATTTGGGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527245.5
CDS GCA 72 bp AGGGCATCTGCACAGGTTTCCCCAGAAGCTTCACTTTaGCTCCCTTGGCTCCTGAGGAGAATAGGATGGGGA +
Preference number: 6 (lower is better)
Translates to: RASAQVSPEASL*LPWLLRRIGWG
Trigger: TCCCCATCCTATTCTCCTCAGGAGCCAAGGGAGGCAAAGTGAAGCTTCTGGGGAAACCTGTGCAGATGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534598.5
CDS CCA 72 bp TCATCTTCGGCACTCACATGCCCAATCCAAAGGCTGTaGTCACTCCGGATCTCATACCTGCCTGTGGGCAGT +
Preference number: 6 (lower is better)
Translates to: SSSALTCPIQRL*SLRISYLPVGS
Trigger: ACTGCCCACAGGCAGGTATGAGATCCGGAGTGACCACAGCCTTTGGATTGGGCATGTGAGTGCCGAAGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CCA 72 bp TCTTTATGGAGATGGTTGCAAAGCCTGGCCTCCTCGTaGCGTCTTAGAGGCAAACGTCATCCAGATCCCGCC +
Preference number: 6 (lower is better)
Translates to: SLWRWLQSLASS*RLRGKRHPDPA
Trigger: GGCGGGATCTGGATGACGTTTGCCTCTAAGACGCCACGAGGAGGCCAGGCTTTGCAACCATCTCCATAAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000525448.5
ENST00000527245.5
ENST00000529658.5
ENST00000531545.5
CDS CAA 72 bp TCCATCTCCTGCACATTGGCGATGTACAGGGTACCGTaGGCCATTGTCTTGAACTGGAGGTCATCCCCCTGC +
Preference number: 6 (lower is better)
Translates to: SISCTLAMYRVP*AIVLNWRSSPC
Trigger: GCAGGGGGATGACCTCCAGTTCAAGACAATGGCCAACGGTACCCTGTACATCGCCAATGTGCAGGAGATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CAA 90 bp CCCGCCATGTTGGAGGCTACGCACACATACATGCCTGCATCGCTCTaGAGTGTATGTGACATCATCAGCTTCCCTCCACGGATCGTGATC +
Preference number: 6 (lower is better)
Translates to: PAMLEATHTYMPASL*SVCDIISFPPRIVI
Trigger: GATCACGATCCGTGGAGGGAAGCTGATGATGTCACATACACTCAAGAGCGATGCAGGCATGTATGTGTGCGTAGCCTCCAACATGGCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CAA 90 bp AGTGGGCTTTCCGTCCTCGAACTTGCCCCTTCTTTATGGAGATGGTaGCAAAGCCTGGCCTCCTCGTGGCGTCTTAGAGGCAAACGTCAT +
Preference number: 6 (lower is better)
Translates to: SGLSVLELAPSLWRW*QSLASSWRLRGKRH
Trigger: ATGACGTTTGCCTCTAAGACGCCACGAGGAGGCCAGGCTTTGCAACCATCTCCATAAAGAAGGGGCAAGTTCGAGGACGGAAAGCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525448.5
ENST00000527245.5
ENST00000529658.5
CDS GCA 72 bp ACACAGGTGTACGTTCCCTCATCTTCGGCACTCACATaGCCAATCCAAAGGCTGTGGTCACTCCGGATCTCA +
Preference number: 6 (lower is better)
Translates to: TQVYVPSSSALT*PIQRLWSLRIS
Trigger: TGAGATCCGGAGTGACCACAGCCTTTGGATTGGGCATGTGAGTGCCGAAGATGAGGGAACGTACACCTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS GCA 72 bp AGGGCATCTGCACAGGTTTCCCCAGAAGCTTCACTTTaGCTCCCTTGGCTCCGTTGTAATATCTGTCGTCCG +
Preference number: 6 (lower is better)
Translates to: RASAQVSPEASL*LPWLRCNICRP
Trigger: CGGACGACAGATATTACAACGGAGCCAAGGGAGGCAAAGTGAAGCTTCTGGGGAAACCTGTGCAGATGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526551.5
CDS CCA 72 bp CTTTCCGTCCTCGAACTTGCCCCTTCTTTATGGAGATaGTTGCAAAGCCTGGCCTCCTCGTGGCGTCTTAGA +
Preference number: 6 (lower is better)
Translates to: LSVLELAPSLWR*LQSLASSWRLR
Trigger: TCTAAGACGCCACGAGGAGGCCAGGCTTTGCAACCATCTCCATAAAGAAGGGGCAAGTTCGAGGACGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000525448.5
ENST00000527245.5
ENST00000529658.5
CDS CCA 72 bp GGAGAGATTGAGGCTCCAGAGGGAAAGAGAATCCTCTaGTCGTTCCATCTCCTATGCTTCTCTGCGGAGCTC +
Preference number: 6 (lower is better)
Translates to: GEIEAPEGKRIL*SFHLLCFSAEL
Trigger: GAGCTCCGCAGAGAAGCATAGGAGATGGAACGACCAGAGGATTCTCTTTCCCTCTGGAGCCTCAATCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538940.5
CDS CCA 72 bp CGGTGTGTAGGCAAAAGAGGCCCTTCTTTATGGAGATaGTTGCAAAGCCTGGCCTCCTCGTGGCGTCTTAGA +
Preference number: 6 (lower is better)
Translates to: RCVGKRGPSLWR*LQSLASSWRLR
Trigger: TCTAAGACGCCACGAGGAGGCCAGGCTTTGCAACCATCTCCATAAAGAAGGGCCTCTTTTGCCTACACACCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531545.5
CDS CAA 72 bp GGCCTCTATCACATAAGACGTGACTGCAGCCCCAGTTaGTGGGTTGGGCTTCCAGGTCAGGGTAATGCTGTT +
Preference number: 6 (lower is better)
Translates to: GLYHIRRDCSPS*WVGLPGQGNAV
Trigger: AACAGCATTACCCTGACCTGGAAGCCCAACCCACAAACTGGGGCTGCAGTCACGTCTTATGTGATAGAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CAA 72 bp CTGGAGGGAGTCCTCTTAGCACAGTACTTTGCTGGCTaGGGGACTGTAGGTCCAACATTGTCCAGCTTCCTC +
Preference number: 6 (lower is better)
Translates to: LEGVLLAQYFAG*GTVGPTLSSFL
Trigger: GAGGAAGCTGGACAATGTTGGACCTACAGTCCCCAAGCCAGCAAAGTACTGTGCTAAGAGGACTCCCTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CAA 72 bp TGTGTAGGCAAAAGAGGCCCTTCTTTATGGAGATGGTaGCAAAGCCTGGCCTCCTCGTGGCGTCTTAGAGGC +
Preference number: 6 (lower is better)
Translates to: CVGKRGPSLWRW*QSLASSWRLRG
Trigger: GCCTCTAAGACGCCACGAGGAGGCCAGGCTTTGCAACCATCTCCATAAAGAAGGGCCTCTTTTGCCTACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531545.5
CDS TCA 72 bp TGGAGGCTACGCACACATACATGCCTGCATCGCTCTTaGGTGTATGTGACATCATCAGCTTCCCTCCACGGA +
Preference number: 6 (lower is better)
Translates to: WRLRTHTCLHRS*VYVTSSASLHG
Trigger: TCCGTGGAGGGAAGCTGATGATGTCACATACACTCAAGAGCGATGCAGGCATGTATGTGTGCGTAGCCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS TCA 72 bp GCAGAGCGTTCAGACAGGGAAATTGTGGGGAGAGATTaGGGCTCCAGAGGGAAAGAGAATCCTCTGGTCGTT +
Preference number: 6 (lower is better)
Translates to: AERSDREIVGRD*GSRGKENPLVV
Trigger: AACGACCAGAGGATTCTCTTTCCCTCTGGAGCCTCAATCTCTCCCCACAATTTCCCTGTCTGAACGCTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538940.5
CDS CCA 72 bp AAAGAGGCCCTTCTTTATGGAGATGGTTGCAAAGCCTaGCCTCCTCGTGGCGTCTTAGAGGCAAACGTCATC +
Preference number: 6 (lower is better)
Translates to: KEALLYGDGCKA*PPRGVLEANVI
Trigger: GATGACGTTTGCCTCTAAGACGCCACGAGGAGGCCAGGCTTTGCAACCATCTCCATAAAGAAGGGCCTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531545.5
CDS CAA 72 bp TTGGAGGCTACGCACACATACATGCCTGCATCGCTCTaGAGTGTATGTGACATCATCAGCTTCCCTCCACGG +
Preference number: 6 (lower is better)
Translates to: LEATHTYMPASL*SVCDIISFPPR
Trigger: CCGTGGAGGGAAGCTGATGATGTCACATACACTCAAGAGCGATGCAGGCATGTATGTGTGCGTAGCCTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CAA 72 bp CTACCCTCTCCCTCTGCAGGATCCAATATGTCCTTATaGGCAGACGTTCCGCGTTCCTCGTCTCAAAGGAAG +
Preference number: 6 (lower is better)
Translates to: LPSPSAGSNMSL*ADVPRSSSQRK
Trigger: CTTCCTTTGAGACGAGGAACGCGGAACGTCTGCCAATAAGGACATATTGGATCCTGCAGAGGGAGAGGGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538940.5
CDS TCA 72 bp GCACACATACATGCCTGCATCGCTCTTGAGTGTATGTaGCATCATCAGCTTCCCTCCACGGATCGTGATCCT +
Preference number: 6 (lower is better)
Translates to: AHIHACIALECM*HHQLPSTDRDP
Trigger: AGGATCACGATCCGTGGAGGGAAGCTGATGATGTCACATACACTCAAGAGCGATGCAGGCATGTATGTGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CCA 72 bp CTCTATCACATAAGACGTGACTGCAGCCCCAGTTTGTaGGTTGGGCTTCCAGGTCAGGGTAATGCTGTTCTT +
Preference number: 6 (lower is better)
Translates to: LYHIRRDCSPSL*VGLPGQGNAVL
Trigger: AAGAACAGCATTACCCTGACCTGGAAGCCCAACCCACAAACTGGGGCTGCAGTCACGTCTTATGTGATAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397801.6
ENST00000538940.5
CDS CCA 72 bp CTCATGATATTCTCAATGCCCCAACAAGGGTCATCTTaGTTCCTCTCGGCGTTTCTGTCCTGGCCTTTGGCT +
Preference number: 6 (lower is better)
Translates to: LMIFSMPQQGSS*FLSAFLSWPLA
Trigger: AGCCAAAGGCCAGGACAGAAACGCCGAGAGGAACCAAGATGACCCTTGTTGGGGCATTGAGAATATCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397801.6
ENST00000525448.5
ENST00000525482.5
ENST00000527196.5
ENST00000527245.5
ENST00000529658.5
ENST00000538940.5
ENST00000543966.5
CDS CAA 72 bp ACTCATGATATTCTCAATGCCCCAACAAGGGTCATCTaGGTTCCTCTCGGCGTTTCTGTCCTGGCCTTTGGC +
Preference number: 6 (lower is better)
Translates to: THDILNAPTRVI*VPLGVSVLAFG
Trigger: GCCAAAGGCCAGGACAGAAACGCCGAGAGGAACCAAGATGACCCTTGTTGGGGCATTGAGAATATCATGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000397801.6
ENST00000525448.5
ENST00000525482.5
ENST00000527196.5
ENST00000527245.5
ENST00000529658.5
ENST00000538940.5
ENST00000543966.5
CDS TCA 72 bp CCTCCCAAGCTAGAGAAGCATAAGGAGAGCCATATCTaGAATGTCTCAGGTAGAGTGCTGACCACTCCAGCA +
Preference number: 6 (lower is better)
Translates to: PPKLEKHKESHI*NVSGRVLTTPA
Trigger: TGCTGGAGTGGTCAGCACTCTACCTGAGACATTTCAGATATGGCTCTCCTTATGCTTCTCTAGCTTGGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527245.5
CDS CAA 72 bp GCCCCTCAAGTGATTCCTATGTGTAGCCAACCAAGATaGAAAACCACTGACCTCAAACACCTCAGAATCTCT +
Preference number: 6 (lower is better)
Translates to: APQVIPMCSQPR*KTTDLKHLRIS
Trigger: AGAGATTCTGAGGTGTTTGAGGTCAGTGGTTTTCAATCTTGGTTGGCTACACATAGGAATCACTTGAGGGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000527245.5
ENST00000528068.5
ENST00000532472.1