Pregenerated sensors for RNU2-1 (Homo sapiens)

Ensembl gene IDs: ENSG00000274585

Ensembl transcript IDs: ENST00000618664.1

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	GGGGGTGCACCGTTCCTGGAGGTACTGCAATACCAGGTCGATGCGTaGAGTGGACGGAGCAAGCTCCTATTCCATCTCCCTGCTCCAAAA	+
Preference number: 5 (lower is better) Translates to: GGAPFLEVLQYQVDA*SGRSKLLFHLPAPK Trigger: TTTTGGAGCAGGGAGATGGAATAGGAGCTTGCTCCGTCCACTCCACGCATCGACCTGGTATTGCAGTACCTCCAGGAACGGTGCACCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000618664.1
CDS CCA 90 bp	TGCACCGTTCCTGGAGGTACTGCAATACCAGGTCGATGCGTGGAGTaGACGGAGCAAGCTCCTATTCCATCTCCCTGCTCCAAAAATCCA	+
Preference number: 5 (lower is better) Translates to: CTVPGGTAIPGRCVE*TEQAPIPSPCSKNP Trigger: TGGATTTTTGGAGCAGGGAGATGGAATAGGAGCTTGCTCCGTCCACTCCACGCATCGACCTGGTATTGCAGTACCTCCAGGAACGGTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000618664.1
CDS CCA 72 bp	CCTGGAGGTACTGCAATACCAGGTCGATGCGTGGAGTaGACGGAGCAAGCTCCTATTCCATCTCCCTGCTCC	+
Preference number: 6 (lower is better) Translates to: PGGTAIPGRCVE*TEQAPIPSPCS Trigger: GGAGCAGGGAGATGGAATAGGAGCTTGCTCCGTCCACTCCACGCATCGACCTGGTATTGCAGTACCTCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000618664.1

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