Pregenerated sensors for RNU105B (Homo sapiens)

Ensembl gene IDs: ENSG00000201348

Ensembl transcript IDs: ENST00000364478.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CCA 90 bp	AGGTCCAGCTTCATCTCCAATGTCATGGAAAAGGACAGTACATCATaGGGACAGAGCCCTGTGCTCCCCTATGCTACTTGGACACAGCCT	+
Preference number: 5 (lower is better) Translates to: RSSFISNVMEKDSTS*GQSPVLPYATWTQP Trigger: AGGCTGTGTCCAAGTAGCATAGGGGAGCACAGGGCTCTGTCCCCATGATGTACTGTCCTTTTCCATGACATTGGAGATGAAGCTGGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000364478.1
CDS TCA 90 bp	ATCCACAGGACTCTGAGAAGTTGTAGGAATATGCATGTGCAGAGTTaGGGTCCAGCTTCATCTCCAATGTCATGGAAAAGGACAGTACAT	+
Preference number: 5 (lower is better) Translates to: IHRTLRSCRNMHVQS*GPASSPMSWKRTVH Trigger: ATGTACTGTCCTTTTCCATGACATTGGAGATGAAGCTGGACCTCAACTCTGCACATGCATATTCCTACAACTTCTCAGAGTCCTGTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000364478.1
CDS CCA 72 bp	GAGCCCTGTGCTCCCCTATGCTACTTGGACACAGCCTaGGGAGAGAGTGACCTCCTGGGTGTATCCACATTG	+
Preference number: 6 (lower is better) Translates to: EPCAPLCYLDTA*GESDLLGVSTL Trigger: CAATGTGGATACACCCAGGAGGTCACTCTCTCCCCAGGCTGTGTCCAAGTAGCATAGGGGAGCACAGGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000364478.1
CDS CCA 72 bp	TTCATCTCCAATGTCATGGAAAAGGACAGTACATCATaGGGACAGAGCCCTGTGCTCCCCTATGCTACTTGG	+
Preference number: 6 (lower is better) Translates to: FISNVMEKDSTS*GQSPVLPYATW Trigger: CCAAGTAGCATAGGGGAGCACAGGGCTCTGTCCCCATGATGTACTGTCCTTTTCCATGACATTGGAGATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000364478.1
CDS TCA 72 bp	CATGGTTTCTCTCCTCCGTCATTATCCACAGGACTCTaGGAAGTTGTAGGAATATGCATGTGCAGAGTTGAG	+
Preference number: 6 (lower is better) Translates to: HGFSPPSLSTGL*EVVGICMCRVE Trigger: CTCAACTCTGCACATGCATATTCCTACAACTTCTCAGAGTCCTGTGGATAATGACGGAGGAGAGAAACCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000364478.1
CDS TCA 72 bp	ACTCTGAGAAGTTGTAGGAATATGCATGTGCAGAGTTaGGGTCCAGCTTCATCTCCAATGTCATGGAAAAGG	+
Preference number: 6 (lower is better) Translates to: TLRSCRNMHVQS*GPASSPMSWKR Trigger: CCTTTTCCATGACATTGGAGATGAAGCTGGACCTCAACTCTGCACATGCATATTCCTACAACTTCTCAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000364478.1

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