Pregenerated sensors for RNU105B (Homo sapiens)
Ensembl gene IDs: ENSG00000201348Ensembl transcript IDs: ENST00000364478.1
Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS CCA 90 bp | AGGTCCAGCTTCATCTCCAATGTCATGGAAAAGGACAGTACATCATaGGGACAGAGCCCTGTGCTCCCCTATGCTACTTGGACACAGCCT | + |
Preference number: 5 (lower is better) Translates to: RSSFISNVMEKDSTS*GQSPVLPYATWTQP Trigger: AGGCTGTGTCCAAGTAGCATAGGGGAGCACAGGGCTCTGTCCCCATGATGTACTGTCCTTTTCCATGACATTGGAGATGAAGCTGGACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000364478.1 |
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CDS TCA 90 bp | ATCCACAGGACTCTGAGAAGTTGTAGGAATATGCATGTGCAGAGTTaGGGTCCAGCTTCATCTCCAATGTCATGGAAAAGGACAGTACAT | + |
Preference number: 5 (lower is better) Translates to: IHRTLRSCRNMHVQS*GPASSPMSWKRTVH Trigger: ATGTACTGTCCTTTTCCATGACATTGGAGATGAAGCTGGACCTCAACTCTGCACATGCATATTCCTACAACTTCTCAGAGTCCTGTGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000364478.1 |
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CDS CCA 72 bp | GAGCCCTGTGCTCCCCTATGCTACTTGGACACAGCCTaGGGAGAGAGTGACCTCCTGGGTGTATCCACATTG | + |
Preference number: 6 (lower is better) Translates to: EPCAPLCYLDTA*GESDLLGVSTL Trigger: CAATGTGGATACACCCAGGAGGTCACTCTCTCCCCAGGCTGTGTCCAAGTAGCATAGGGGAGCACAGGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000364478.1 |
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CDS CCA 72 bp | TTCATCTCCAATGTCATGGAAAAGGACAGTACATCATaGGGACAGAGCCCTGTGCTCCCCTATGCTACTTGG | + |
Preference number: 6 (lower is better) Translates to: FISNVMEKDSTS*GQSPVLPYATW Trigger: CCAAGTAGCATAGGGGAGCACAGGGCTCTGTCCCCATGATGTACTGTCCTTTTCCATGACATTGGAGATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000364478.1 |
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CDS TCA 72 bp | CATGGTTTCTCTCCTCCGTCATTATCCACAGGACTCTaGGAAGTTGTAGGAATATGCATGTGCAGAGTTGAG | + |
Preference number: 6 (lower is better) Translates to: HGFSPPSLSTGL*EVVGICMCRVE Trigger: CTCAACTCTGCACATGCATATTCCTACAACTTCTCAGAGTCCTGTGGATAATGACGGAGGAGAGAAACCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000364478.1 |
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CDS TCA 72 bp | ACTCTGAGAAGTTGTAGGAATATGCATGTGCAGAGTTaGGGTCCAGCTTCATCTCCAATGTCATGGAAAAGG | + |
Preference number: 6 (lower is better) Translates to: TLRSCRNMHVQS*GPASSPMSWKR Trigger: CCTTTTCCATGACATTGGAGATGAAGCTGGACCTCAACTCTGCACATGCATATTCCTACAACTTCTCAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000364478.1 |